BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0382.4
(684 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 161 6e-38
gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cult... 158 5e-37
gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultiva... 158 5e-37
ref|NP_913627.1| putative helicase [Oryza sativa (japonica culti... 154 9e-36
dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cu... 154 9e-36
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 152 5e-35
emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar... 151 6e-35
dbj|BAB11364.1| helicase [Arabidopsis thaliana] 150 2e-34
ref|NP_198527.1| hypothetical protein [Arabidopsis thaliana] 150 2e-34
gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa... 149 2e-34
ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica c... 148 5e-34
ref|XP_481695.1| helicase-like protein [Oryza sativa (japonica c... 146 2e-33
emb|CAE05848.2| OSJNBa0091C07.10 [Oryza sativa (japonica cultiva... 145 3e-33
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 145 3e-33
gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), ... 143 2e-32
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 132 4e-29
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 132 4e-29
gb|AAP51800.1| putative helicase [Oryza sativa (japonica cultiva... 127 9e-28
dbj|BAD87333.1| DNA binding protein-like [Oryza sativa (japonica... 125 6e-27
ref|NP_912739.1| unnamed protein product [Oryza sativa (japonica... 124 1e-26
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 161 bits (408), Expect = 6e-38
Identities = 98/285 (34%), Positives = 149/285 (51%), Gaps = 35/285 (12%)
Query: 2 AAKVFYLGDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKICCMKEKITLPFLRKPPQLLY 61
+ K + G + C +C ++ WYEE + P F +CC + K+ LP L+KPP L
Sbjct: 231 SVKEWNFGKPTCTCQHCGALFWYEERT-RGKGKGPPSFSLCCKQGKVDLPTLKKPPTYLS 289
Query: 62 NLM-NEINDRYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSL 120
NLM E R +N+ +NIR N++F+FTS+GG V+ IN+G+ P F ++ QN HRI +L
Sbjct: 290 NLMCKEKGKRSRNYMDNIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRISTL 349
Query: 121 IPPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFY 180
+P +G ++ QLYIYDT NE NR+ DA
Sbjct: 350 LPEEGDKPRWAQLYIYDTENEVKNRI------------------------DAS------- 378
Query: 181 ISSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPR 240
+SS + +D ++ L ++D++N LA+ F+ +D + N L+L + D R
Sbjct: 379 -TSSHNRESIDSHIVLGLKNMLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGR 437
Query: 241 TYNMPTADEVAALIIGDLDTVNEG-NIIVKGTDGGFQRLPERKKK 284
+NMP+A EVAALI+ D +G +IIV D G +R+ E K
Sbjct: 438 QHNMPSASEVAALIVNDTSENQKGRDIIVHYKDTGPRRISENHPK 482
>gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37535030|ref|NP_921817.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1477
Score = 158 bits (400), Expect = 5e-37
Identities = 88/268 (32%), Positives = 144/268 (52%), Gaps = 37/268 (13%)
Query: 3 AKVFYLGDASYVCSNCQSIMWYEEEAVKFDHSEI--PKFKICCMKEKITLPFLRKPPQLL 60
+K++ G + +C +C ++MW+ E ++ HS + P F +CC + K+ LP L++ P L
Sbjct: 151 SKIWNFGGPTCMCQHCHALMWHAERSL---HSTVKQPSFGLCCKQGKVALPPLKEQPPYL 207
Query: 61 YNLMNEINDRYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSL 120
+L+ R N+++NIR+ N++F+FTS+GG V+ IN+G+ P F L+ QN H IG+L
Sbjct: 208 TSLLTRDGGRSTNYQQNIRSYNSMFAFTSMGGTVDRKINNGHGPYIFRLNGQNHHHIGTL 267
Query: 121 IPPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFY 180
+P +F QLY+YDT NE NR++ +
Sbjct: 268 LPEGSNKPRFQQLYVYDTENEIENRIEASK------------------------------ 297
Query: 181 ISSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPR 240
S + +PLD + L ++D++N LA+ F+ +D + D N+ L+L N+ +D R
Sbjct: 298 --SGASNAPLDQKTIASLLKMLDENNTLAQTFRMARDRFKEDDYHNYTLRLLDNRDQDGR 355
Query: 241 TYNMPTADEVAALIIGDLDTVNEGNIIV 268
NMP+A EVA LI+ D + G IV
Sbjct: 356 QDNMPSASEVALLIVKDPTKKSYGRDIV 383
>gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1501
Score = 158 bits (400), Expect = 5e-37
Identities = 88/268 (32%), Positives = 144/268 (52%), Gaps = 37/268 (13%)
Query: 3 AKVFYLGDASYVCSNCQSIMWYEEEAVKFDHSEI--PKFKICCMKEKITLPFLRKPPQLL 60
+K++ G + +C +C ++MW+ E ++ HS + P F +CC + K+ LP L++ P L
Sbjct: 151 SKIWNFGGPTCMCQHCHALMWHAERSL---HSTVKQPSFGLCCKQGKVALPPLKEQPPYL 207
Query: 61 YNLMNEINDRYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSL 120
+L+ R N+++NIR+ N++F+FTS+GG V+ IN+G+ P F L+ QN H IG+L
Sbjct: 208 TSLLTRDGGRSTNYQQNIRSYNSMFAFTSMGGTVDRKINNGHGPYIFRLNGQNHHHIGTL 267
Query: 121 IPPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFY 180
+P +F QLY+YDT NE NR++ +
Sbjct: 268 LPEGSNKPRFQQLYVYDTENEIENRIEASK------------------------------ 297
Query: 181 ISSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPR 240
S + +PLD + L ++D++N LA+ F+ +D + D N+ L+L N+ +D R
Sbjct: 298 --SGASNAPLDQKTIASLLKMLDENNTLAQTFRMARDRFKEDDYHNYTLRLLDNRDQDGR 355
Query: 241 TYNMPTADEVAALIIGDLDTVNEGNIIV 268
NMP+A EVA LI+ D + G IV
Sbjct: 356 QDNMPSASEVALLIVKDPTKKSYGRDIV 383
>ref|NP_913627.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1453
Score = 154 bits (389), Expect = 9e-36
Identities = 93/255 (36%), Positives = 134/255 (52%), Gaps = 37/255 (14%)
Query: 7 YLGDASYVCSNCQSIMWYEEEAVKFDHSEIPK---FKICCMKEKITLPFLRKPPQLLYNL 63
Y G S+ C C ++ WY+E VK D + + + +CC KI+LP L+ PP +L L
Sbjct: 18 YYGGPSHECPYCGAVFWYQER-VKRDSAVSQRRIVYNLCCRGGKISLPELKYPPDMLAKL 76
Query: 64 MNEIND-RYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLIP 122
+ D + K F IR+ N+LF+FTSLG +VE IN+G P F ++ HRIGSL+P
Sbjct: 77 LKFDGDAQSKRFLRQIRSYNSLFAFTSLGADVEKSINNGTAPYVFKINGVVHHRIGSLLP 136
Query: 123 PKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYIS 182
+GA KF QLYIYDT NE +NR+ IF
Sbjct: 137 QRGAKPKFAQLYIYDTENETANRINIFD-------------------------------R 165
Query: 183 SSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRTY 242
+S P DPS++ L A++D+ N+L K F+ +D + G+ L+L KD Y
Sbjct: 166 ENSNDEP-DPSIVTGLGAMLDQHNDLVKSFRYARDRLNEHGNEQIALRLLGCNAKDEVQY 224
Query: 243 NMPTADEVAALIIGD 257
N+PT+ E+A +I+GD
Sbjct: 225 NLPTSGEIAGIIVGD 239
>dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 1652
Score = 154 bits (389), Expect = 9e-36
Identities = 93/255 (36%), Positives = 134/255 (52%), Gaps = 37/255 (14%)
Query: 7 YLGDASYVCSNCQSIMWYEEEAVKFDHSEIPK---FKICCMKEKITLPFLRKPPQLLYNL 63
Y G S+ C C ++ WY+E VK D + + + +CC KI+LP L+ PP +L L
Sbjct: 217 YYGGPSHECPYCGAVFWYQER-VKRDSAVSQRRIVYNLCCRGGKISLPELKYPPDMLAKL 275
Query: 64 MNEIND-RYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLIP 122
+ D + K F IR+ N+LF+FTSLG +VE IN+G P F ++ HRIGSL+P
Sbjct: 276 LKFDGDAQSKRFLRQIRSYNSLFAFTSLGADVEKSINNGTAPYVFKINGVVHHRIGSLLP 335
Query: 123 PKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYIS 182
+GA KF QLYIYDT NE +NR+ IF
Sbjct: 336 QRGAKPKFAQLYIYDTENETANRINIFD-------------------------------R 364
Query: 183 SSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRTY 242
+S P DPS++ L A++D+ N+L K F+ +D + G+ L+L KD Y
Sbjct: 365 ENSNDEP-DPSIVTGLGAMLDQHNDLVKSFRYARDRLNEHGNEQIALRLLGCNAKDEVQY 423
Query: 243 NMPTADEVAALIIGD 257
N+PT+ E+A +I+GD
Sbjct: 424 NLPTSGEIAGIIVGD 438
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 152 bits (383), Expect = 5e-35
Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 41/276 (14%)
Query: 2 AAKVFYLGDASYVCSNCQSIMWYEEE---------AVKFDHSEIPKFKICCMKEKITLPF 52
A+K++ G + +C +C ++MW+ E+ + P F +CC + K+ LP
Sbjct: 155 ASKIWNFGGPTCMCPHCHALMWHGEKIQSTRSKQPSFSRQRKNQPSFGLCCKQGKVALPP 214
Query: 53 LRKPPQLLYNLMNEINDRYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQ 112
L++PP L +L+ +N+++NIR+ N++F+FTS+GG V+ IN G P F L+ Q
Sbjct: 215 LKEPPHFLSSLLARDGGTSENYQQNIRSYNSMFAFTSMGGAVDRKINKGRGPYVFRLNGQ 274
Query: 113 NCHRIGSLIPPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADA 172
N H IG+L+P +F QLYIYDT NE NR++ R
Sbjct: 275 NYHHIGTLLPKGSNKPRFQQLYIYDTENEIKNRIEASR---------------------- 312
Query: 173 KFLLSFFYISSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLY 232
S +R + LD + L ++D++N LA+ F+ ++ + D N+ L+L
Sbjct: 313 ----------SGTRNASLDEKTIAGLLTMLDENNTLAQTFRMARERFKEDDYHNYTLRLL 362
Query: 233 CNKTKDPRTYNMPTADEVAALIIGDLDTVNEGNIIV 268
N+ +D R NMP+ EVA LI+ D + G IV
Sbjct: 363 DNRDQDGRQNNMPSTSEVAMLIVKDPTEKSYGRDIV 398
>emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar-group)]
Length = 2052
Score = 151 bits (382), Expect = 6e-35
Identities = 89/254 (35%), Positives = 128/254 (50%), Gaps = 34/254 (13%)
Query: 7 YLGDASYVCSNCQSIMWYEEEAVKFDHSEIPK--FKICCMKEKITLPFLRKPPQLLYNLM 64
Y G ++ C C ++ WY+E K K + +CC +I LP L+ PP L L+
Sbjct: 220 YYGGPTHECPYCGAVFWYQERVKKSSLVSKRKVVYNLCCKGGRIDLPELKHPPSFLAKLL 279
Query: 65 NEIND-RYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLIPP 123
D R K F IR+ N+LF+FTSLG +++ IN G+ P F ++ HRIGSL+P
Sbjct: 280 KFDGDARSKRFLRQIRSYNSLFAFTSLGADIDRSINTGSSPCVFKINGVVHHRIGSLLPK 339
Query: 124 KGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYISS 183
GAP KF QLYIYDT NE +NRM IF
Sbjct: 340 HGAPPKFAQLYIYDTDNETTNRMNIFD-------------------------------KE 368
Query: 184 SSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRTYN 243
SS P D +++ L +++D+ NEL K F+ K+ +E G + L+L KD YN
Sbjct: 369 SSSDGPPDKQIVEKLGSMLDEHNELVKSFRYAKERLEEHGYQDTALRLMGCNAKDEVQYN 428
Query: 244 MPTADEVAALIIGD 257
+P+ E+A +++GD
Sbjct: 429 LPSNGEIAGIVVGD 442
>dbj|BAB11364.1| helicase [Arabidopsis thaliana]
Length = 1523
Score = 150 bits (378), Expect = 2e-34
Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 28/273 (10%)
Query: 9 GDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKICCMKEKITLPFLRKPPQLLYNLMNEIN 68
GD Y C C +IMW+ E K ++ KF CC++ ++ LPFL+ P+LLY L +
Sbjct: 239 GDPIYACEYCGAIMWHGERIEKTVKNKKSKFTSCCLQGQVKLPFLKNSPELLYALPTNDD 298
Query: 69 DRYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLIPPKGAPA 128
+ ++F+ENIRA N +F FTSLGG+ E+ + P F + +N HRIGSL P P
Sbjct: 299 EISRHFRENIRAYNMIFYFTSLGGDTENSVRASGGPQMFQIHRENYHRIGSLKPDNDIPP 358
Query: 129 KFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYISSSSRKS 188
KF QLYI DT NE NR + +N + +K
Sbjct: 359 KFMQLYIVDTENEVDNRSEALSNGVN---------------------------ADKYKKK 391
Query: 189 PLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRTYNMPTAD 248
L ++ + L++ N + +D + ++++ + KD R YN+PT
Sbjct: 392 ELRKEIIDAVIKLLNSINPYVSHLRTARDRFNANPEETLHMRIVSKREKDGRVYNVPTTS 451
Query: 249 EVAALIIGDLD-TVNEGNIIVKGTDGGFQRLPE 280
EVA LI GD + +I+V+ G QR+ E
Sbjct: 452 EVAMLIPGDFTIDMPSRDIVVQEKSGKLQRISE 484
>ref|NP_198527.1| hypothetical protein [Arabidopsis thaliana]
Length = 1307
Score = 150 bits (378), Expect = 2e-34
Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 28/273 (10%)
Query: 9 GDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKICCMKEKITLPFLRKPPQLLYNLMNEIN 68
GD Y C C +IMW+ E K ++ KF CC++ ++ LPFL+ P+LLY L +
Sbjct: 99 GDPIYACEYCGAIMWHGERIEKTVKNKKSKFTSCCLQGQVKLPFLKNSPELLYALPTNDD 158
Query: 69 DRYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLIPPKGAPA 128
+ ++F+ENIRA N +F FTSLGG+ E+ + P F + +N HRIGSL P P
Sbjct: 159 EISRHFRENIRAYNMIFYFTSLGGDTENSVRASGGPQMFQIHRENYHRIGSLKPDNDIPP 218
Query: 129 KFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYISSSSRKS 188
KF QLYI DT NE NR + +N + +K
Sbjct: 219 KFMQLYIVDTENEVDNRSEALSNGVN---------------------------ADKYKKK 251
Query: 189 PLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRTYNMPTAD 248
L ++ + L++ N + +D + ++++ + KD R YN+PT
Sbjct: 252 ELRKEIIDAVIKLLNSINPYVSHLRTARDRFNANPEETLHMRIVSKREKDGRVYNVPTTS 311
Query: 249 EVAALIIGDLD-TVNEGNIIVKGTDGGFQRLPE 280
EVA LI GD + +I+V+ G QR+ E
Sbjct: 312 EVAMLIPGDFTIDMPSRDIVVQEKSGKLQRISE 344
>gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa (japonica
cultivar-group)]
Length = 2157
Score = 149 bits (377), Expect = 2e-34
Identities = 87/256 (33%), Positives = 130/256 (49%), Gaps = 38/256 (14%)
Query: 7 YLGDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKI----CCMKEKITLPFLRKPPQLLYN 62
Y G +Y C C+++ WY+E S I K KI CC +I LP LR PP+ L +
Sbjct: 147 YYGPPTYECPYCRAMFWYQERVKSA--SAISKRKIIYNLCCKGGRIQLPKLRAPPEPLAS 204
Query: 63 LMNEIND-RYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLI 121
L+N D R KNF IR+ N++F+F+S+G ++ IN GN P F ++ HRIG+L+
Sbjct: 205 LLNYNGDARSKNFLRQIRSYNSMFAFSSMGAAIDKSINTGNAPYVFKINGVVHHRIGTLV 264
Query: 122 PPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYI 181
P G+P KF QLY+YD NE NR+ IF
Sbjct: 265 PSCGSPPKFAQLYVYDPENELQNRLNIFE------------------------------- 293
Query: 182 SSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRT 241
+ DP +++ L++++D +N L + F+ ++ V G+ L+L KD
Sbjct: 294 NDGDNSDKADPEIIRALSSMLDAENTLVQSFRYARERVIQHGNQQVTLRLLGCNAKDDVQ 353
Query: 242 YNMPTADEVAALIIGD 257
YN+PT E+AA+I+GD
Sbjct: 354 YNLPTNSEIAAIIVGD 369
>ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|50509840|dbj|BAD32013.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|34394334|dbj|BAC84865.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1516
Score = 148 bits (374), Expect = 5e-34
Identities = 87/256 (33%), Positives = 129/256 (49%), Gaps = 38/256 (14%)
Query: 7 YLGDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKI----CCMKEKITLPFLRKPPQLLYN 62
Y G +Y C C ++ WY+E S I K KI CC +I LP LR PP+ L +
Sbjct: 56 YYGPPTYECPYCGAMFWYQERVKSA--SAISKRKIIYNLCCKGGRIQLPKLRAPPEPLAS 113
Query: 63 LMNEIND-RYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLI 121
L+N D R KNF IR+ N++F+F+S+G ++ IN GN P F ++ HRIG+L+
Sbjct: 114 LLNYNGDARSKNFLRQIRSYNSMFAFSSMGAAIDKSINTGNAPYVFKINGVVHHRIGTLV 173
Query: 122 PPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYI 181
P G+P KF QLY+YD NE NR+ IF
Sbjct: 174 PSCGSPPKFAQLYVYDPENELQNRLNIFE------------------------------- 202
Query: 182 SSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRT 241
+ DP +++ L++++D +N L + F+ ++ V G+ L+L KD
Sbjct: 203 NDGDNSDKADPEIIRALSSMLDAENTLVQSFRYARERVIQHGNQQVTLRLLGCNAKDDVQ 262
Query: 242 YNMPTADEVAALIIGD 257
YN+PT E+AA+I+GD
Sbjct: 263 YNLPTNSEIAAIIVGD 278
>ref|XP_481695.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|38424032|dbj|BAD01692.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|38637630|dbj|BAD03910.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1430
Score = 146 bits (368), Expect = 2e-33
Identities = 86/256 (33%), Positives = 129/256 (49%), Gaps = 38/256 (14%)
Query: 7 YLGDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKI----CCMKEKITLPFLRKPPQLLYN 62
Y G +Y C C+++ WY+E S I K KI CC +I LP LR PP+ L +
Sbjct: 79 YYGPPTYECPYCRAMFWYQERVKSA--SAISKRKIIYNLCCKGGRIQLPKLRAPPEPLAS 136
Query: 63 LMNEIND-RYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLI 121
L+N D R K F IR+ N++F+F+S+G ++ IN GN P F ++ HRIG+L+
Sbjct: 137 LLNYNGDARSKIFLRQIRSYNSMFAFSSMGAAIDKSINTGNAPYVFKINGVVHHRIGTLV 196
Query: 122 PPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYI 181
P G+P KF QLY+YD NE NR+ IF
Sbjct: 197 PSCGSPPKFAQLYVYDPENELQNRLNIFE------------------------------- 225
Query: 182 SSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRT 241
+ DP +++ L++++D +N L + F+ ++ V G+ L+L KD
Sbjct: 226 NDGDNSDKADPEIIRALSSMLDAENTLVQSFRYARERVIQHGNQQVTLRLLGCNAKDDVQ 285
Query: 242 YNMPTADEVAALIIGD 257
YN+PT E+AA+I+GD
Sbjct: 286 YNLPTNSEIAAIIVGD 301
>emb|CAE05848.2| OSJNBa0091C07.10 [Oryza sativa (japonica cultivar-group)]
gi|38346863|emb|CAE02213.2| OSJNBb0002N06.2 [Oryza
sativa (japonica cultivar-group)]
gi|50923337|ref|XP_472029.1| OSJNBa0091C07.10 [Oryza
sativa (japonica cultivar-group)]
Length = 443
Score = 145 bits (367), Expect = 3e-33
Identities = 86/278 (30%), Positives = 141/278 (49%), Gaps = 38/278 (13%)
Query: 8 LGDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKICCMKEKITLPFLRKPPQLLYNLMNEI 67
LG S+ C C ++ WYEE + H+ P + CC + LP + PP+ L++L+ +
Sbjct: 36 LGPPSHTCCYCGALFWYEERIDRRRHTTRPLYNKCCKGGSVILPSYKPPPEPLHSLLTAV 95
Query: 68 NDRYKN--FKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLIPPKG 125
DR K+ F ENIR N++F+FTS+G NV INDG P F S Q CHRIGSL+P +
Sbjct: 96 -DRAKSAHFCENIRYYNSMFAFTSMGVNVIDSINDGRGPYTFKRSGQLCHRIGSLLPKRD 154
Query: 126 APAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYISSSS 185
++ QLYI+DT NE NR+++ Y +
Sbjct: 155 KRPEYAQLYIFDTQNELMNRLRVGTY--------------------------------KN 182
Query: 186 RKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGS--SNFYLKLYCNKTKDPRTYN 243
R + ++ L + D N + K+F+ +D + G+ +++++L+ + K +N
Sbjct: 183 RAFQPNEEIVAALMQMFDAHNPIVKLFRVARDRLSRAGAPDDHYFIRLFGSPDKHGDIFN 242
Query: 244 MPTADEVAALIIGDLDTVNEG-NIIVKGTDGGFQRLPE 280
P A EV L++GDL T + G +++V+ G +++ E
Sbjct: 243 APVASEVVGLVVGDLGTSDIGRDLMVEDKAGNLRKVKE 280
>emb|CAB91581.1| putative protein [Arabidopsis thaliana]
gi|15228453|ref|NP_189796.1| AT hook motif-containing
protein-related [Arabidopsis thaliana]
gi|11357786|pir||T48965 hypothetical protein F4M19.60 -
Arabidopsis thaliana
Length = 1752
Score = 145 bits (367), Expect = 3e-33
Identities = 89/262 (33%), Positives = 130/262 (48%), Gaps = 37/262 (14%)
Query: 2 AAKVFYL--GDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKICCMKEKITLPFLRKPPQL 59
A K YL GDA+Y C+ C ++MW+ E K ++ P F +CC K + LP L+ P L
Sbjct: 310 ATKSAYLDHGDATYKCNYCGALMWFAERINKKQQNKSPTFTLCCGKGNVKLPLLKDSPAL 369
Query: 60 LYNLMNEINDRYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGS 119
+ NL+ + +NF+ENIR N +F+ TSLGG V++ + G P F L N H IGS
Sbjct: 370 INNLLTGDDALSRNFRENIRIYNMIFAMTSLGGRVDNSMPKGKGPNMFRLQGGNYHLIGS 429
Query: 120 LIPPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFF 179
L P G AK++QLYI DT NE NR +
Sbjct: 430 LKPNPGDYAKYSQLYIVDTENEVDNRATVINK---------------------------- 461
Query: 180 YISSSSRKSPLDPSLMKD----LTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCN- 234
R +P L K+ L +++K N F++ ++ ++ D F++++ +
Sbjct: 462 --GKGRRNTPAKQKLKKEVIEALIEMLNKVNPYVDKFRQARERIQDDNDEPFHMRIVADR 519
Query: 235 KTKDPRTYNMPTADEVAALIIG 256
K D RTY+MPT+ EVAALI G
Sbjct: 520 KGVDRRTYSMPTSSEVAALIPG 541
>gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), putative [Oryza
sativa (japonica cultivar-group)]
Length = 1806
Score = 143 bits (361), Expect = 2e-32
Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 39/292 (13%)
Query: 7 YLGDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKI----CCMKEKITLPFLRKPPQLLYN 62
Y G +Y C C ++ W++E S I K KI CC KI LP LR+PP+ L
Sbjct: 233 YYGAPTYECLYCVAVFWFQERVKSL--SAISKRKIVYNLCCKSGKIQLPKLREPPEPLKT 290
Query: 63 LMNEIND-RYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLI 121
L+ D R K F +R+ N++F+FTS+G ++ IN+G+ P F ++ H+IGSL+
Sbjct: 291 LLKFNGDARSKRFLRQVRSYNSMFAFTSMGATIDRTINNGSAPYVFKINGVVHHKIGSLL 350
Query: 122 PPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYI 181
P +G +F QLYIYD NE NR+ IF
Sbjct: 351 PAQGRRPQFAQLYIYDPENEIQNRINIFE------------------------------- 379
Query: 182 SSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRT 241
+ S DP+++ L ++D N L + F ++ + G+ + L+L K
Sbjct: 380 NDGSNSDKADPAIVDALCTMLDSHNTLVQKFHYARERLNEHGNQSLTLRLMGCNAKSDVQ 439
Query: 242 YNMPTADEVAALIIGDLDTVNEG-NIIVKGTDGGFQRLPERKKKPFLHSSSI 292
YN+PT+ E+AA+I+GD +I+V+ D G +R+ + + S S+
Sbjct: 440 YNLPTSGELAAIIVGDYSAAEYSYDILVQEKDDGLRRIVDAIDRGITSSDSV 491
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 132 bits (332), Expect = 4e-29
Identities = 78/237 (32%), Positives = 122/237 (50%), Gaps = 27/237 (11%)
Query: 22 MWYEEEAVKFDHSEIPKFKICCMKEKITLPFLRKPPQLLYNLMNEINDRYKNFKENIRA* 81
MW+ E K +SE PKF +CC + + LPFL++ P+L+ L+ + +++++ IR
Sbjct: 1 MWFNERINKKSNSENPKFSLCCGQGSVKLPFLKESPELIKKLLKGNDALSRHYRQFIRIY 60
Query: 82 NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLIPPKGAPAKFTQLYIYDTHNE 141
N +F+ TSLGG V+ + G P F L N H+IGSL P G AK++QLYI DT NE
Sbjct: 61 NMIFAMTSLGGKVDKSMPKGRGPAMFRLQGGNYHQIGSLKPKDGDYAKYSQLYIVDTENE 120
Query: 142 FSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYISSSSRKSPLDPSLMKDLTAL 201
NR + N SS+ K L+ L+ + +
Sbjct: 121 VENRANVIGKGNNG--------------------------SSTKGKKNLNKQLIDAIIKM 154
Query: 202 IDKDNELAKMFQRVKDFVETDGSSNFYLKLYCN-KTKDPRTYNMPTADEVAALIIGD 257
+++ N + F+ ++ +++ F++++ + K D R YNMPTA EVAALI GD
Sbjct: 155 LNQVNPYVEKFRSARERIDSTNDEPFHMRIVSDRKGTDGRLYNMPTAGEVAALIPGD 211
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 132 bits (332), Expect = 4e-29
Identities = 78/237 (32%), Positives = 122/237 (50%), Gaps = 27/237 (11%)
Query: 22 MWYEEEAVKFDHSEIPKFKICCMKEKITLPFLRKPPQLLYNLMNEINDRYKNFKENIRA* 81
MW+ E K +SE PKF +CC + + LPFL++ P+L+ L+ + +++++ IR
Sbjct: 1 MWFNERINKKSNSENPKFSLCCGQGSVKLPFLKESPELIKKLLKGNDALSRHYRQFIRIY 60
Query: 82 NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLIPPKGAPAKFTQLYIYDTHNE 141
N +F+ TSLGG V+ + G P F L N H+IGSL P G AK++QLYI DT NE
Sbjct: 61 NMIFAMTSLGGKVDKSMPKGRGPAMFRLQGGNYHQIGSLKPKDGDYAKYSQLYIVDTENE 120
Query: 142 FSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYISSSSRKSPLDPSLMKDLTAL 201
NR + N SS+ K L+ L+ + +
Sbjct: 121 VENRANVIGKGNNG--------------------------SSTKGKKNLNKQLIDAIIKM 154
Query: 202 IDKDNELAKMFQRVKDFVETDGSSNFYLKLYCN-KTKDPRTYNMPTADEVAALIIGD 257
+++ N + F+ ++ +++ F++++ + K D R YNMPTA EVAALI GD
Sbjct: 155 LNQVNPYVEKFRSARERIDSTNDEPFHMRIVSDRKGTDGRLYNMPTAGEVAALIPGD 211
>gb|AAP51800.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37530422|ref|NP_919513.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|18542919|gb|AAL75754.1| Putative helicase [Oryza
sativa]
Length = 257
Score = 127 bits (320), Expect = 9e-28
Identities = 84/250 (33%), Positives = 117/250 (46%), Gaps = 40/250 (16%)
Query: 7 YLGDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKI----CCMKEKITLPFLRKPPQLLYN 62
Y G +Y C C ++ WY+E S I K KI CC +I LP LR PP+ L
Sbjct: 40 YYGPPTYECPYCGAMFWYQERVKST--SAITKRKIVYNLCCKGGQIQLPKLRPPPEPLAT 97
Query: 63 LMNEIND-RYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLI 121
L+N D R K F IR N++F FTS+G V+ IN GN P F ++ HRIG+L+
Sbjct: 98 LLNFNGDARSKRFLRQIRLYNSMFVFTSMGATVDKSINTGNAPYVFKINGVVHHRIGTLV 157
Query: 122 PPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYI 181
+G+P KF QLYIYD+ NE NR+ IF
Sbjct: 158 RSRGSPPKFAQLYIYDSENEIQNRLNIFE------------------------------- 186
Query: 182 SSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYL-KLYCNKTKDPR 240
+ D ++ L+ + D +N L + F+ K+ + G L +L CN KD
Sbjct: 187 NDGDNVDKADSEILAALSLMFDAENALVQNFRYAKERLSEHGDQQITLRRLGCN-AKDDV 245
Query: 241 TYNMPTADEV 250
YN+PT+ E+
Sbjct: 246 QYNLPTSGEI 255
>dbj|BAD87333.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
gi|57899579|dbj|BAD87158.1| DNA binding protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 1083
Score = 125 bits (313), Expect = 6e-27
Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 55/274 (20%)
Query: 7 YLGDASYVCSNCQSIMWYEEEAVKFDHSEIPKFKICCMKEKITLPFLRKPPQLLYNLMNE 66
Y G +Y C C ++ W++E LP LR+PP+ L L+
Sbjct: 205 YYGAPTYECLYCGAVFWFQER----------------------LPKLREPPEPLKTLLKF 242
Query: 67 IND-RYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGSLIPPKG 125
D R K F +R+ N++F+FTS+G V+ IN+G+ P F ++ H+IGSL+P +G
Sbjct: 243 NGDARSKRFLRQVRSYNSMFAFTSMGATVDRTINNGSAPYVFKINGVVHHKIGSLLPAQG 302
Query: 126 APAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYISSSS 185
+F QLYIYD NE NR+ IF + S
Sbjct: 303 RRPQFAQLYIYDPENEIQNRINIFE-------------------------------NDGS 331
Query: 186 RKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRTYNMP 245
DP+++ L ++D N L + F+ ++ + +G+ L+L K YN+P
Sbjct: 332 NSDKADPAIVDALCTMLDSHNILVQKFRYARERLNENGNQRLTLRLMGCNAKSDVQYNLP 391
Query: 246 TADEVAALIIGDLDTVNEG-NIIVKGTDGGFQRL 278
T+ E+AA+I+GD +I+V+ D G Q +
Sbjct: 392 TSGELAAIIVGDYSAAEYSYDILVQEKDDGLQHV 425
>ref|NP_912739.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1278
Score = 124 bits (310), Expect = 1e-26
Identities = 77/222 (34%), Positives = 116/222 (51%), Gaps = 34/222 (15%)
Query: 59 LLYNLMNEINDRY-KNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRI 117
+L NL+ DR + F IR+ N+LF+FTSLG +V+ IN+G P F ++ HRI
Sbjct: 1 MLANLLRFDGDRRSRRFLRQIRSYNSLFAFTSLGADVDKSINNGTAPCVFKINGIVHHRI 60
Query: 118 GSLIPPKGAPAKFTQLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLS 177
GSL+P +GAP KF QLYIYDT NE SNRM++F
Sbjct: 61 GSLLPQQGAPPKFAQLYIYDTENEVSNRMRVFD--------------------------- 93
Query: 178 FFYISSSSRKSPLDPSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTK 237
SS P DP ++ +L A++D+ N+L K F+ + ++ G L+L +K
Sbjct: 94 ----KESSTDEP-DPFIVTELGAMLDEHNDLVKSFRFARKRLKDHGDEKIALRLLGCNSK 148
Query: 238 DPRTYNMPTADEVAALIIGDLDTVN-EGNIIVKGTDGGFQRL 278
D YN+PT+ E+A +I+GD +++V+ D +R+
Sbjct: 149 DEVQYNLPTSGEIAGIIVGDYSNDKYTYDVVVQSCDSRLRRV 190
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.345 0.151 0.500
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,015,127,204
Number of Sequences: 2540612
Number of extensions: 39706024
Number of successful extensions: 152673
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 152465
Number of HSP's gapped (non-prelim): 173
length of query: 684
length of database: 863,360,394
effective HSP length: 135
effective length of query: 549
effective length of database: 520,377,774
effective search space: 285687397926
effective search space used: 285687397926
T: 11
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 79 (35.0 bits)
Lotus: description of TM0382.4