BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0380.6
(347 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU94410.1| At4g35335 [Arabidopsis thaliana] gi|50198781|gb|A... 545 e-154
ref|XP_478801.1| putative CMP-sialic acid transporter [Oryza sat... 542 e-153
ref|NP_680766.2| nucleotide-sugar transporter family protein [Ar... 373 e-102
dbj|BAD45826.1| putative CMP-sialic acid transporter [Oryza sati... 223 5e-57
gb|AAM60900.1| CMP-sialic acid transporter-like protein [Arabido... 219 9e-56
dbj|BAB10651.1| CMP-sialic acid transporter-like protein [Arabid... 207 5e-52
emb|CAB80251.1| UDP-galactose transporter-like protein [Arabidop... 178 2e-43
ref|XP_648595.1| nucleotide sugar transporter, putative [Entamoe... 155 2e-36
emb|CAE56616.1| Hypothetical protein CBG24372 [Caenorhabditis br... 151 2e-35
emb|CAH91136.1| hypothetical protein [Pongo pygmaeus] 150 4e-35
emb|CAD43419.1| SI:bZ30I22.3 (novel protein similar to vertebrat... 149 9e-35
emb|CAB80250.1| putative protein [Arabidopsis thaliana] gi|30804... 149 1e-34
emb|CAB76857.1| OTTHUMP00000016832 [Homo sapiens] gi|17389549|gb... 148 3e-34
gb|AAH08372.1| Unknown (protein for IMAGE:3950091) [Homo sapiens] 148 3e-34
ref|XP_624386.1| PREDICTED: similar to CG2675-PA [Apis mellifera] 147 5e-34
emb|CAF89992.1| unnamed protein product [Tetraodon nigroviridis] 147 5e-34
ref|XP_232884.3| PREDICTED: similar to CMP-sialic acid transport... 146 1e-33
ref|NP_989844.1| CMP-Sialic acid transporter [Gallus gallus] gi|... 145 2e-33
gb|AAH37701.1| Slc35a2 protein [Mus musculus] gi|9087203|sp|Q9R0... 145 2e-33
ref|NP_001003058.1| CMP-sialic acid transporter [Canis familiari... 145 2e-33
>gb|AAU94410.1| At4g35335 [Arabidopsis thaliana] gi|50198781|gb|AAT70424.1|
At4g35335 [Arabidopsis thaliana]
gi|51971024|dbj|BAD44204.1| unnamed protein product
[Arabidopsis thaliana]
Length = 352
Score = 545 bits (1404), Expect = e-154
Identities = 283/352 (80%), Positives = 307/352 (86%), Gaps = 6/352 (1%)
Query: 1 MEYRKIKDEDKVR-DSDVESV-AVNNTVSDGETKVDS----HRTQVQWKRKSMVTFALTI 54
MEYRKIKDED SD+ESV ++TV+ + + ++ WKRK +VT ALTI
Sbjct: 1 MEYRKIKDEDDHDVASDIESVKGKSHTVASSNIAMATLGVGSSERINWKRKGVVTCALTI 60
Query: 55 LTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDDNRLTTTL 114
LTSSQAILIVWSKRAGKYEYSVTTANF+VETLKCA+SL+AL RIW EGVTDDNRL+TT
Sbjct: 61 LTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLLALTRIWKNEGVTDDNRLSTTF 120
Query: 115 DEVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKKRLSEIQW 174
DEV V+PIPAALYL KNLLQYYIFAYVDAPGYQILKN NIISTGVLYRIILK++LSEIQW
Sbjct: 121 DEVKVFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKRKLSEIQW 180
Query: 175 AAFILLTAGCTTAQLNSNSDHVLQTPFQGWVMAIAMALLSGFAGVYTEAIIKKRPSRNIN 234
A FILL GCTTAQLNSNSD VLQT GW MAI MALLSGFAGVYTEAIIKKRPSRNIN
Sbjct: 181 AGFILLCCGCTTAQLNSNSDRVLQTSLPGWTMAIVMALLSGFAGVYTEAIIKKRPSRNIN 240
Query: 235 VQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNHALSGIAVSMVMKYA 294
VQNFWLYVFGM FNAVAI++QDFDAV NKGFFHGYSFIT+LMI NHALSGIAVSMVMKYA
Sbjct: 241 VQNFWLYVFGMAFNAVAIVIQDFDAVANKGFFHGYSFITLLMILNHALSGIAVSMVMKYA 300
Query: 295 DNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLHSAGKMQ 346
DNIVKVYSTSVAMLLTAVVSVFLF FHLSLAFFLG+ VVSV++YLHSAGK++
Sbjct: 301 DNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVYLHSAGKLR 352
>ref|XP_478801.1| putative CMP-sialic acid transporter [Oryza sativa (japonica
cultivar-group)] gi|34393556|dbj|BAC83154.1| putative
CMP-sialic acid transporter [Oryza sativa (japonica
cultivar-group)]
Length = 356
Score = 542 bits (1396), Expect = e-153
Identities = 279/353 (79%), Positives = 302/353 (85%), Gaps = 7/353 (1%)
Query: 1 MEYRKIKDE---DKVRDSDVESVAVNNTVSDGETK----VDSHRTQVQWKRKSMVTFALT 53
MEYR++KD+ D V D+ES + S T + + + WK KS+VT ALT
Sbjct: 1 MEYRRVKDQESYDVVSQKDIESPGERSLSSTSATSSLSTAGASKGKNSWKLKSIVTLALT 60
Query: 54 ILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDDNRLTTT 113
+LTSSQAILIVWSKRAGKYEYSVTTANF VE LKC +SL+AL R WN +GVT+DNRL+T+
Sbjct: 61 LLTSSQAILIVWSKRAGKYEYSVTTANFSVEALKCLLSLIALYRTWNSQGVTEDNRLSTS 120
Query: 114 LDEVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKKRLSEIQ 173
DEV VYPIPA LY+VKNLLQYYIFAYVDAP YQILKN NIISTGVLYRIILKK+LSEIQ
Sbjct: 121 FDEVSVYPIPAILYMVKNLLQYYIFAYVDAPAYQILKNLNIISTGVLYRIILKKKLSEIQ 180
Query: 174 WAAFILLTAGCTTAQLNSNSDHVLQTPFQGWVMAIAMALLSGFAGVYTEAIIKKRPSRNI 233
WAAFILL AGCTTAQLN +SDHVLQTP QGWVMAI MALLSGFAGVYTEAIIKKRPSRNI
Sbjct: 181 WAAFILLCAGCTTAQLNPSSDHVLQTPIQGWVMAIVMALLSGFAGVYTEAIIKKRPSRNI 240
Query: 234 NVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNHALSGIAVSMVMKY 293
NVQNFWLY+FGM FN VAI VQDFDAVMNKGFFHGYSFITVLMI NHALSGIAVSMVMKY
Sbjct: 241 NVQNFWLYIFGMLFNLVAICVQDFDAVMNKGFFHGYSFITVLMILNHALSGIAVSMVMKY 300
Query: 294 ADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLHSAGKMQ 346
ADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLG+ VVSV++YLHS GK Q
Sbjct: 301 ADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSVSVYLHSVGKPQ 353
>ref|NP_680766.2| nucleotide-sugar transporter family protein [Arabidopsis thaliana]
Length = 302
Score = 373 bits (958), Expect = e-102
Identities = 204/303 (67%), Positives = 220/303 (72%), Gaps = 47/303 (15%)
Query: 1 MEYRKIKDE----------------DKVRDSDVESV-AVNNTVSDGETKVDS----HRTQ 39
MEYRKIKDE D SD+ESV ++TV+ + + +
Sbjct: 1 MEYRKIKDEIWTLFNAQFCSELLQDDHDVASDIESVKGKSHTVASSNIAMATLGVGSSER 60
Query: 40 VQWKRKSMVTFALTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIW 99
+ WKRK +VT ALTILTSSQAILIVWSKRAGK IW
Sbjct: 61 INWKRKGVVTCALTILTSSQAILIVWSKRAGK--------------------------IW 94
Query: 100 NKEGVTDDNRLTTTLDEVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGV 159
EGVTDDNRL+TT DEV V+PIPAALYL KNLLQYYIFAYVDAPGYQILKN NIISTGV
Sbjct: 95 KNEGVTDDNRLSTTFDEVKVFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGV 154
Query: 160 LYRIILKKRLSEIQWAAFILLTAGCTTAQLNSNSDHVLQTPFQGWVMAIAMALLSGFAGV 219
LYRIILK++LSEIQWA FILL GCTTAQLNSNSD VLQT GW MAI MALLSGFAGV
Sbjct: 155 LYRIILKRKLSEIQWAGFILLCCGCTTAQLNSNSDRVLQTSLPGWTMAIVMALLSGFAGV 214
Query: 220 YTEAIIKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFN 279
YTEAIIKKRPSRNINVQNFWLYVFGM FNAVAI++QDFDAV NKGFFHGYSFIT+LMI N
Sbjct: 215 YTEAIIKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVANKGFFHGYSFITLLMILN 274
Query: 280 HAL 282
HAL
Sbjct: 275 HAL 277
>dbj|BAD45826.1| putative CMP-sialic acid transporter [Oryza sativa (japonica
cultivar-group)]
Length = 322
Score = 223 bits (569), Expect = 5e-57
Identities = 123/310 (39%), Positives = 188/310 (59%), Gaps = 16/310 (5%)
Query: 40 VQWKRKSMVTFALTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIW 99
+QW +V LT+LTSSQ IL S+ GKY+Y T F+ E K + S L W
Sbjct: 1 MQWY---LVAALLTVLTSSQGILTTLSQSNGKYKYDYATIPFLAELFKLSFSSFFL---W 54
Query: 100 NKEGVTDDNRLTTTLDEVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGV 159
+ + R+T + +Y +P+ +YL+ N +Q+ YVD YQI+ N I++TG+
Sbjct: 55 KECQSSSPPRMTKEWRSIRLYLVPSVIYLIHNNVQFATLTYVDPSTYQIMGNLKIVTTGI 114
Query: 160 LYRIILKKRLSEIQWAAFILLTAGCTTAQL----NSNSDHVLQTPFQGWVMAIAMALLSG 215
L+R++LK++LS +QW A +LL G TT+Q+ ++ D + PFQG+++ I A LS
Sbjct: 115 LFRLVLKRKLSNLQWMAVVLLAVGTTTSQVKGCGDAPCDSLFSAPFQGYMLGILSACLSA 174
Query: 216 FAGVYTEAIIKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKG-----FFHGYS 270
AGVYTE ++KK + ++ QN LY FG+ FN ++ DF A +G F+GYS
Sbjct: 175 LAGVYTEYLMKKN-NDSLYWQNVQLYTFGVIFNMGWLIYGDFKAGFERGPWWQRLFNGYS 233
Query: 271 FITVLMIFNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGT 330
T +++FN +G+ VS +MKY+DNIVKVYSTS+AMLLT V+SV+LF +L FLG
Sbjct: 234 ITTWMVVFNLGSTGLLVSWLMKYSDNIVKVYSTSMAMLLTMVLSVYLFNVRATLQLFLGI 293
Query: 331 IVVSVAIYLH 340
++ +++ ++
Sbjct: 294 VICIISLQMY 303
>gb|AAM60900.1| CMP-sialic acid transporter-like protein [Arabidopsis thaliana]
gi|28973255|gb|AAO63952.1| putative CMP-sialic acid
transporter [Arabidopsis thaliana]
gi|28393785|gb|AAO42302.1| putative CMP-sialic acid
transporter [Arabidopsis thaliana]
gi|18422134|ref|NP_568596.1| nucleotide-sugar
transporter family protein [Arabidopsis thaliana]
Length = 340
Score = 219 bits (558), Expect = 9e-56
Identities = 125/304 (41%), Positives = 180/304 (59%), Gaps = 11/304 (3%)
Query: 48 VTFALTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDD 107
V LTILTSSQ IL S+ G Y+Y T F+ E K IS + L R T
Sbjct: 9 VAVLLTILTSSQGILTTLSQSDGGYKYDYATVPFLAEVFKLIISGLFLWREMRTSSSTT- 67
Query: 108 NRLTTTLDEVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKK 167
+R+TT V ++ IP+ +YL+ N +Q+ YVD YQI+ N I++TG+L+R+ LK+
Sbjct: 68 SRITTDWKSVRLFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLKR 127
Query: 168 RLSEIQWAAFILLTAGCTTAQLN----SNSDHVLQTPFQGWVMAIAMALLSGFAGVYTEA 223
+LS++QW A LL G TT+Q+ ++ D + P QG+++ I A LS AG+YTE
Sbjct: 128 KLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYTEF 187
Query: 224 IIKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKG-----FFHGYSFITVLMIF 278
++K R + + QN LY FG FN ++ DF KG F GYS T L++
Sbjct: 188 LMK-RNNDTLYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVVL 246
Query: 279 NHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIY 338
N +G+ VS +MKYADNIVKVYSTS+AMLLT V S++LF F +L FLG ++ ++++
Sbjct: 247 NLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSLH 306
Query: 339 LHSA 342
++ A
Sbjct: 307 MYFA 310
>dbj|BAB10651.1| CMP-sialic acid transporter-like protein [Arabidopsis thaliana]
Length = 323
Score = 207 bits (526), Expect = 5e-52
Identities = 117/293 (39%), Positives = 172/293 (57%), Gaps = 11/293 (3%)
Query: 59 QAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDDNRLTTTLDEVI 118
Q IL S+ G Y+Y T F+ E K IS + L R T +R+TT V
Sbjct: 3 QGILTTLSQSDGGYKYDYATVPFLAEVFKLIISGLFLWREMRTSSSTT-SRITTDWKSVR 61
Query: 119 VYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKKRLSEIQWAAFI 178
++ IP+ +YL+ N +Q+ YVD YQI+ N I++TG+L+R+ LK++LS++QW A
Sbjct: 62 LFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLKRKLSKLQWMAIG 121
Query: 179 LLTAGCTTAQLN----SNSDHVLQTPFQGWVMAIAMALLSGFAGVYTEAIIKKRPSRNIN 234
LL G TT+Q+ ++ D + P QG+++ I A LS AG+YTE ++K R + +
Sbjct: 122 LLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYTEFLMK-RNNDTLY 180
Query: 235 VQNFWLYVFGMGFNAVAILVQDFDAVMNKG-----FFHGYSFITVLMIFNHALSGIAVSM 289
QN LY FG FN ++ DF KG F GYS T L++ N +G+ VS
Sbjct: 181 WQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVVLNLGSTGLLVSW 240
Query: 290 VMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLHSA 342
+MKYADNIVKVYSTS+AMLLT V S++LF F +L FLG ++ ++++++ A
Sbjct: 241 LMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSLHMYFA 293
>emb|CAB80251.1| UDP-galactose transporter-like protein [Arabidopsis thaliana]
gi|3080416|emb|CAA18735.1| UDP-galactose
transporter-like protein [Arabidopsis thaliana]
gi|7488414|pir||T06123 UDP-galactose transport protein
homolog F23E12.100 - Arabidopsis thaliana
Length = 102
Score = 178 bits (452), Expect = 2e-43
Identities = 89/102 (87%), Positives = 97/102 (94%)
Query: 245 MGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNHALSGIAVSMVMKYADNIVKVYSTS 304
M FNAVAI++QDFDAV NKGFFHGYSFIT+LMI NHALSGIAVSMVMKYADNIVKVYSTS
Sbjct: 1 MAFNAVAIVIQDFDAVANKGFFHGYSFITLLMILNHALSGIAVSMVMKYADNIVKVYSTS 60
Query: 305 VAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLHSAGKMQ 346
VAMLLTAVVSVFLF FHLSLAFFLG+ VVSV++YLHSAGK++
Sbjct: 61 VAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVYLHSAGKLR 102
>ref|XP_648595.1| nucleotide sugar transporter, putative [Entamoeba histolytica
HM-1:IMSS] gi|56464796|gb|EAL43205.1| nucleotide sugar
transporter, putative [Entamoeba histolytica HM-1:IMSS]
Length = 318
Score = 155 bits (391), Expect = 2e-36
Identities = 93/294 (31%), Positives = 156/294 (52%), Gaps = 13/294 (4%)
Query: 56 TSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDDNRLTTTLD 115
T Q+IL +S+ YS+ + E LK I LV L + KE + + +
Sbjct: 18 TVIQSILGRYSRGVLHETYSIPSTIVFNEILKFLICLVMLKFVHKKENLLQ--HVIYLIK 75
Query: 116 EVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKKRLSEIQWA 175
++ +P +Y ++N+L Y I A Y ++ + +T + + L ++LS QW
Sbjct: 76 TSLIASVPGCIYFIQNMLLYIILQNTQAAVYTVIIQLKVFTTAIFSVLFLGRKLSIAQWR 135
Query: 176 AFILLTAGCTTAQLNSN-----SDHVLQTPFQGWVMAIAMALLSGFAGVYTEAIIKKRPS 230
A LL G ++++N + + G V+++ MA SGF+GVY E I+K + S
Sbjct: 136 ALALLVTGVILVEISTNRYSSEKKNETENNLLGIVLSLVMACCSGFSGVYMEKILKNKTS 195
Query: 231 R----NINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNHALSGIA 286
NI +N L V+G GF ++ + D ++++ GFF G+S+ITVL+I + GI
Sbjct: 196 GTEPLNIWERNIQLCVYGCGFALLSTFIFDGKSILDNGFFGGWSYITVLLIIIQGVGGIF 255
Query: 287 VSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGT--IVVSVAIY 338
V++VM YADNIVK +S A++LT + S+F+FG + F +G +++S+A Y
Sbjct: 256 VALVMTYADNIVKGFSIGCAIVLTTICSIFIFGTQVDTTFIIGAAFVIISIANY 309
>emb|CAE56616.1| Hypothetical protein CBG24372 [Caenorhabditis briggsae]
Length = 367
Score = 151 bits (382), Expect = 2e-35
Identities = 96/308 (31%), Positives = 163/308 (52%), Gaps = 15/308 (4%)
Query: 45 KSMVTFALTILTSSQAILIVWSK-RAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEG 103
K+ + LT+ S +LI +S+ R + T A ++ E +KC I L + +
Sbjct: 41 KTAILIWLTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCVICLFLVA-----QE 95
Query: 104 VTDDNRLTTTLDEVIVYP-------IPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIIS 156
T + ++I P IPA +Y+V+N L Y +++DA + I I +
Sbjct: 96 ETPRRFIHALKTQIIEQPYDTMKVCIPAMIYIVQNNLFYVAASHLDAATFMITSQLKIFT 155
Query: 157 TGVLYRIILKKRLSEIQWAAFILLTAGCTTAQLNSNSDHVL--QTPFQGWVMAIAMALLS 214
+ IIL++ L+ QW A +L AG + QL + ++PF G+V + LS
Sbjct: 156 AAIFTVIILRRSLNRTQWFALAVLFAGVSLVQLQGTKSKEITGESPFIGFVAVVVACCLS 215
Query: 215 GFAGVYTEAIIKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITV 274
GFAG+Y E I+K ++ ++N + VF + + +AI +QD V G +G+ I
Sbjct: 216 GFAGIYFEKILKGSAPVSLWMRNVQMAVFAIPSSFIAIYMQDAKTVNEYGLLYGFDSIVW 275
Query: 275 LMIFNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVS 334
L + + + G++V++ +KYADNI K ++TSVA++L+ + S+FLF F SL F LG +V
Sbjct: 276 LTVLWYGIGGLSVAVCIKYADNIAKNFATSVAIVLSTIGSMFLFDFIPSLTFLLGAALVI 335
Query: 335 VAIYLHSA 342
+I+L+S+
Sbjct: 336 FSIFLYSS 343
>emb|CAH91136.1| hypothetical protein [Pongo pygmaeus]
Length = 337
Score = 150 bits (380), Expect = 4e-35
Identities = 89/295 (30%), Positives = 160/295 (54%), Gaps = 7/295 (2%)
Query: 52 LTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDDNRLT 111
+T++ ++ I + +++ + K Y TTA + E +K +S+ L + G +
Sbjct: 20 MTLMAAAYTIALRYTRTSDKELYFSTTAVCITEVIKLLLSVGILAKETGSLGRFKASLRE 79
Query: 112 TTLD---EVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKKR 168
L E++ +P+ +Y V+N + + + +DA YQ+ I T + ++L +
Sbjct: 80 NVLGSPKELLKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRT 139
Query: 169 LSEIQWAAFILLTAGCTTAQ---LNSNSDHVLQTPFQGWVMAIAMALLSGFAGVYTEAII 225
LS++QW + +L AG T Q + V Q P G+ L SGFAGVY E ++
Sbjct: 140 LSKLQWVSVFMLCAGVTLVQWKPAQATKVVVEQNPLLGFGAIAIAVLCSGFAGVYFEKVL 199
Query: 226 KKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNHALSGI 285
K + ++ V+N +Y+ G+ V + + D + KGFF+GY++ +IF ++ G+
Sbjct: 200 KSSDT-SLWVRNIQMYLSGIIVTLVGVYLSDGAEIKEKGFFYGYTYYVWFVIFLASVGGL 258
Query: 286 AVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLH 340
S+V+KY DNI+K +S + A++L+ + SV LFG ++L F LGT++V V+IYL+
Sbjct: 259 YTSVVVKYTDNIMKGFSAAAAIVLSTIASVMLFGLQITLTFALGTLLVCVSIYLY 313
>emb|CAD43419.1| SI:bZ30I22.3 (novel protein similar to vertebrate UDP-galactose
transporters) [Danio rerio]
Length = 347
Score = 149 bits (377), Expect = 9e-35
Identities = 99/318 (31%), Positives = 169/318 (53%), Gaps = 21/318 (6%)
Query: 43 KRKSMVTFALTILTSSQAILIVWSKRA--GKYEYSVTTANFMVETLKCAISLVALGRIWN 100
K+ + A+ ++ ++ IL + R G + Y+ T+A M E LK L + +
Sbjct: 3 KKLKYTSLAILVIQNASLILSIRYVRTLPGDHFYT-TSAVVMAEVLKVITCLFII--LIQ 59
Query: 101 KEGVTDDNRLTTTLDEVIVY-------PIPAALYLVKNLLQYYIFAYVDAPGYQILKNFN 153
K G + ++ D +++ +P+ +Y ++N LQY + + A +Q+
Sbjct: 60 KRGSVK-SFVSLLYDSIVIQYWDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLK 118
Query: 154 IISTGVLYRIILKKRLSEIQWAAFILLTAGCTTAQLNSNSDH-------VLQTPFQGWVM 206
I++T + ++L+K LS IQW + +LL AG Q+ S Q F+G +
Sbjct: 119 ILTTALFSVLMLRKSLSRIQWISLVLLFAGVAIVQVEQESGKQKEAVTAANQNYFKGLLS 178
Query: 207 AIAMALLSGFAGVYTEAIIKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFF 266
I L SGFAGVY E I+K S ++ ++N L +FG + + D A+ KGF
Sbjct: 179 VIISCLSSGFAGVYFEKILKGS-SASVWMRNIQLGIFGTVLGLLGMWWNDGAAIAEKGFL 237
Query: 267 HGYSFITVLMIFNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAF 326
GY+ + +IFN A G+ V++V+KYADNI+K ++TS +++++ + SV+LFGFH+ L F
Sbjct: 238 FGYTPMVWGVIFNQAFGGLLVAVVVKYADNILKGFATSFSIIVSTITSVYLFGFHVDLVF 297
Query: 327 FLGTIVVSVAIYLHSAGK 344
LG +V A+Y++S K
Sbjct: 298 TLGAGLVIGAVYMYSLPK 315
>emb|CAB80250.1| putative protein [Arabidopsis thaliana] gi|3080417|emb|CAA18736.1|
putative protein [Arabidopsis thaliana]
gi|7486015|pir||T06124 hypothetical protein F23E12.110 -
Arabidopsis thaliana
Length = 193
Score = 149 bits (376), Expect = 1e-34
Identities = 78/98 (79%), Positives = 86/98 (87%), Gaps = 3/98 (3%)
Query: 39 QVQWKRK--SMVTFALTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALG 96
++ WKRK +VT ALTILTSSQAILIVWSKRAGKYEYSVTTANF+V TLKCA+SL+AL
Sbjct: 11 RINWKRKIRGVVTCALTILTSSQAILIVWSKRAGKYEYSVTTANFLV-TLKCALSLLALT 69
Query: 97 RIWNKEGVTDDNRLTTTLDEVIVYPIPAALYLVKNLLQ 134
RIW EGVTDDNRL+TT DEV V+PIPAALYL KNLLQ
Sbjct: 70 RIWKNEGVTDDNRLSTTFDEVKVFPIPAALYLFKNLLQ 107
>emb|CAB76857.1| OTTHUMP00000016832 [Homo sapiens] gi|17389549|gb|AAH17807.1| Solute
carrier family 35 (CMP-sialic acid transporter), member
A1 [Homo sapiens] gi|1669558|dbj|BAA13522.1| CMP-sialic
acid transporter [Homo sapiens]
gi|5453621|ref|NP_006407.1| solute carrier family 35
(CMP-sialic acid transporter), member A1 [Homo sapiens]
gi|2499226|sp|P78382|S35A1_HUMAN CMP-sialic acid
transporter (CMP-Sia-Tr) (CMP-SA-Tr) (Solute carrier
family 35, member A1)
Length = 337
Score = 148 bits (373), Expect = 3e-34
Identities = 88/295 (29%), Positives = 158/295 (52%), Gaps = 7/295 (2%)
Query: 52 LTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDDNRLT 111
+T++ + I + +++ + K Y TTA + E +K +S+ L + G +
Sbjct: 20 MTLMAAVYTIALRYTRTSDKELYFSTTAVCITEVIKLLLSVGILAKETGSLGRFKASLRE 79
Query: 112 TTLD---EVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKKR 168
L E++ +P+ +Y V+N + + + +DA YQ+ I T + ++L +
Sbjct: 80 NVLGSPKELLKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRT 139
Query: 169 LSEIQWAAFILLTAGCTTAQ---LNSNSDHVLQTPFQGWVMAIAMALLSGFAGVYTEAII 225
LS++QW + +L AG T Q + V Q P G+ L SGFAGVY E ++
Sbjct: 140 LSKLQWVSVFMLCAGVTLVQWKPAQATKVVVEQNPLLGFGAIAIAVLCSGFAGVYFEKVL 199
Query: 226 KKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNHALSGI 285
K + ++ V+N +Y+ G+ + + D + KGFF+GY++ +IF ++ G+
Sbjct: 200 KSSDT-SLWVRNIQMYLSGIIVTLAGVYLSDGAEIKEKGFFYGYTYYVWFVIFLASVGGL 258
Query: 286 AVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLH 340
S+V+KY DNI+K +S + A++L+ + SV LFG ++L F LGT++V V+IYL+
Sbjct: 259 YTSVVVKYTDNIMKGFSAAAAIVLSTIASVMLFGLQITLTFALGTLLVCVSIYLY 313
>gb|AAH08372.1| Unknown (protein for IMAGE:3950091) [Homo sapiens]
Length = 345
Score = 148 bits (373), Expect = 3e-34
Identities = 88/295 (29%), Positives = 158/295 (52%), Gaps = 7/295 (2%)
Query: 52 LTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDDNRLT 111
+T++ + I + +++ + K Y TTA + E +K +S+ L + G +
Sbjct: 28 MTLMAAVYTIALRYTRTSDKELYFSTTAVCITEVIKLLLSVGILAKETGSLGRFKASLRE 87
Query: 112 TTLD---EVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKKR 168
L E++ +P+ +Y V+N + + + +DA YQ+ I T + ++L +
Sbjct: 88 NVLGSPKELLKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRT 147
Query: 169 LSEIQWAAFILLTAGCTTAQ---LNSNSDHVLQTPFQGWVMAIAMALLSGFAGVYTEAII 225
LS++QW + +L AG T Q + V Q P G+ L SGFAGVY E ++
Sbjct: 148 LSKLQWVSVFMLCAGVTLVQWKPAQATKVVVEQNPLLGFGAIAIAVLCSGFAGVYFEKVL 207
Query: 226 KKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNHALSGI 285
K + ++ V+N +Y+ G+ + + D + KGFF+GY++ +IF ++ G+
Sbjct: 208 KSSDT-SLWVRNIQMYLSGIIVTLAGVYLSDGAEIKEKGFFYGYTYYVWFVIFLASVGGL 266
Query: 286 AVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLH 340
S+V+KY DNI+K +S + A++L+ + SV LFG ++L F LGT++V V+IYL+
Sbjct: 267 YTSVVVKYTDNIMKGFSAAAAIVLSTIASVMLFGLQITLTFALGTLLVCVSIYLY 321
>ref|XP_624386.1| PREDICTED: similar to CG2675-PA [Apis mellifera]
Length = 332
Score = 147 bits (371), Expect = 5e-34
Identities = 95/310 (30%), Positives = 164/310 (52%), Gaps = 17/310 (5%)
Query: 43 KRKSMVTFALTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKE 102
K S++T LT+ + + + +++ + +TA M E +K L+ ++ +E
Sbjct: 12 KYVSLIT--LTLQNALVGLSMRYARTRSGDMFLSSTAVVMAEVVKFLTCLIL---VFVEE 66
Query: 103 G----VTDDNRLTTTLDEV--IVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIIS 156
G D +LT + + +P+ LY+++N L Y + +DA YQ+ I++
Sbjct: 67 GNFLKFFDSLKLTIIKQPIDTLKVSVPSLLYIIQNNLLYISASNLDAATYQVTYQLKILT 126
Query: 157 TGVLYRIILKKRLSEIQWAAFILLTAGCTTAQLNSNSDHVL-----QTPFQGWVMAIAMA 211
T +IL++ L QW A ILL G QL +SD L Q G+ A++
Sbjct: 127 TAFFAVVILRRSLRNTQWGALILLVIGVVLVQLAQSSDTTLPSGREQNHLLGFSAALSAC 186
Query: 212 LLSGFAGVYTEAIIKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSF 271
LSGFAG+Y E I+K ++ ++N L + + F + V D + + +GFF GY
Sbjct: 187 FLSGFAGIYFEKILKDSDI-SVWMRNIQLSLLSLPFGLITCFVNDGEMLQKQGFFFGYDL 245
Query: 272 ITVLMIFNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTI 331
+I A G+ V+MV+KYADNI+K ++TS+A++++ V S++LF F+LS F +G I
Sbjct: 246 FICYLIVLQAGGGLIVAMVVKYADNILKGFATSLAIIISCVASIYLFNFNLSFQFSIGAI 305
Query: 332 VVSVAIYLHS 341
+V +I+++S
Sbjct: 306 LVICSIFMYS 315
>emb|CAF89992.1| unnamed protein product [Tetraodon nigroviridis]
Length = 341
Score = 147 bits (371), Expect = 5e-34
Identities = 97/324 (29%), Positives = 167/324 (50%), Gaps = 9/324 (2%)
Query: 29 GETKVDSHRTQVQWKRKSMVTFALTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLK- 87
GE+ +++V + K + L + +S + I + + + T+A M E LK
Sbjct: 11 GESAASRGQSEVNRRLKYISLAVLVVQNASLILSIRYVRTLPGDHFFATSAVVMAEILKV 70
Query: 88 --CAISLVALGRIWNKE-GVTDDNRLTTTLDEVIVYPIPAALYLVKNLLQYYIFAYVDAP 144
C + ++ R KE + + + + + IP+ +Y ++N LQY + + A
Sbjct: 71 LTCLVLILVQKRFSVKETALLLLDAVVFQYKDTLKLAIPSLIYTLQNNLQYIAISNLPAA 130
Query: 145 GYQILKNFNIISTGVLYRIILKKRLSEIQWAAFILLTAGCTTAQLNSNSDHVLQTPFQ-- 202
+Q+ I++T + ++L+K LS +QW + +LL G Q V + Q
Sbjct: 131 TFQVTYQLKILTTALFSVLMLRKSLSRVQWVSLLLLFLGVGIVQDQQKKASVAEDSGQNY 190
Query: 203 --GWVMAIAMALLSGFAGVYTEAIIKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAV 260
G V + L SGFAGVY E I+K S ++ V+N L VFG + + D AV
Sbjct: 191 AAGLVAVVVSCLSSGFAGVYFEKILKGS-SASVWVRNVQLGVFGTALGLLGLWWSDGAAV 249
Query: 261 MNKGFFHGYSFITVLMIFNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGF 320
+GF GY+ + +IFN A G+ V++V+KYADNI+K ++TS +++++ V+S++LF F
Sbjct: 250 AQRGFLFGYTGLVWAVIFNQAFGGLLVAVVVKYADNILKGFATSFSIIISTVLSIYLFAF 309
Query: 321 HLSLAFFLGTIVVSVAIYLHSAGK 344
+ L F LG +V A+Y++S K
Sbjct: 310 RVDLLFTLGAGLVIGAVYMYSLPK 333
>ref|XP_232884.3| PREDICTED: similar to CMP-sialic acid transporter [Rattus
norvegicus]
Length = 426
Score = 146 bits (368), Expect = 1e-33
Identities = 88/296 (29%), Positives = 159/296 (52%), Gaps = 9/296 (3%)
Query: 52 LTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVAL----GRIWNKEGVTDD 107
+T++ ++ I + +++ + Y TTA + E +K IS+ L G + + +
Sbjct: 110 MTLVAAAYTIALRYTRTTAEGLYFSTTAVCITEVIKLLISVGLLAKETGSLGRFKASLSE 169
Query: 108 NRLTTTLDEVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKK 167
N L + E++ +P+ +Y V+N + + + +DA YQ+ I T + ++L +
Sbjct: 170 NVLGSP-KELLKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNR 228
Query: 168 RLSEIQWAAFILLTAGCTTAQ---LNSNSDHVLQTPFQGWVMAIAMALLSGFAGVYTEAI 224
LS++QW + +L G T Q + V Q P G+ L SGFAGVY E +
Sbjct: 229 SLSKLQWISVFMLCGGVTLVQWKPAQATKVVVAQNPLLGFGAIAIAVLCSGFAGVYFEKV 288
Query: 225 IKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNHALSG 284
+K + ++ V+N +Y+ G+ + D + KGFF+GY++ +IF ++ G
Sbjct: 289 LKSSDT-SLWVRNIQMYLSGIAVTLAGTYLSDGAEIKEKGFFYGYTYYVWFVIFLASVGG 347
Query: 285 IAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLH 340
+ S+V+KY DNI+K +S + A++L+ V SV LFG ++L+F LG ++V V+IYL+
Sbjct: 348 LYTSVVVKYTDNIMKGFSAAAAIVLSTVASVILFGLQITLSFTLGALLVCVSIYLY 403
>ref|NP_989844.1| CMP-Sialic acid transporter [Gallus gallus]
gi|27262949|emb|CAD59551.1| CMP-Sialic acid transporter
[Gallus gallus]
Length = 338
Score = 145 bits (366), Expect = 2e-33
Identities = 90/300 (30%), Positives = 159/300 (53%), Gaps = 17/300 (5%)
Query: 52 LTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDDNRLT 111
+T++ ++ + + +++ G Y TTA + E +K +S+ L R RL
Sbjct: 20 MTLVAATYTVALRYTRTVGAELYFSTTAVCITEVIKLFLSMGILARESGSLA-----RLI 74
Query: 112 TTLDE--------VIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRI 163
T+L E ++ +P+ +Y V+N + + + +DA YQ+ I T + +
Sbjct: 75 TSLKENVFGSPKELLKLSVPSLVYAVQNNMAFVALSNLDAAVYQVTYQLKIPCTALCTVL 134
Query: 164 ILKKRLSEIQWAAFILLTAGCTTAQ---LNSNSDHVLQTPFQGWVMAIAMALLSGFAGVY 220
+L + LS++QW + +L G Q + V Q P+ G+ L SGFAGVY
Sbjct: 135 MLNRTLSKLQWFSVFMLCGGVILVQWKPAQATKVQVEQNPWLGFGAITIAVLCSGFAGVY 194
Query: 221 TEAIIKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNH 280
E ++K + ++ V+N +Y+ G+ V + + D V+ KGFF+GY+ L+IF
Sbjct: 195 FEKVLKSSDT-SLWVRNIQMYLSGIVVTLVGVYMSDGAQVLEKGFFYGYTCFVWLVIFLA 253
Query: 281 ALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLH 340
++ G+ S+V+KY DNI+K +S + A++L+ V SV LFG +++ F LG I+V V+IY +
Sbjct: 254 SVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTVASVVLFGLQITVTFTLGAILVCVSIYFY 313
>gb|AAH37701.1| Slc35a2 protein [Mus musculus] gi|9087203|sp|Q9R0M8|S35A2_MOUSE
UDP-galactose translocator (UDP-galactose transporter)
(UGT) (UDP-Gal-Tr) (Solute carrier family 35, member A2)
(mUGT1) gi|6429657|dbj|BAA86885.1| UDP-galactose
transporter 1 [Mus musculus]
Length = 390
Score = 145 bits (365), Expect = 2e-33
Identities = 103/329 (31%), Positives = 170/329 (51%), Gaps = 20/329 (6%)
Query: 26 VSDGETKVDSHRTQVQWKRKSMVTFALTILTSSQAILIV-WSKRAGKYEYSVTTANFMVE 84
VS G + S T +R ++ A+ ++ ++ IL + +++ + TTA M E
Sbjct: 18 VSSGALEPGS--TTAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAE 75
Query: 85 TLKCAISLVALGRIWNKEGVTDDNRLTTTLDEVIVYP--------IPAALYLVKNLLQYY 136
LK L+ L K G + L L E ++ +P+ +Y ++N LQY
Sbjct: 76 VLKGLTCLLLL--FAQKRG--NVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYV 131
Query: 137 IFAYVDAPGYQILKNFNIISTGVLYRIILKKRLSEIQWAAFILLTAGCTTAQLN----SN 192
+ + A +Q+ I++T + ++L + LS +QWA+ +LL G Q S
Sbjct: 132 AISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGSG 191
Query: 193 SDHVLQTPFQGWVMAIAMALLSGFAGVYTEAIIKKRPSRNINVQNFWLYVFGMGFNAVAI 252
+ Q P G +A L SGFAGVY E I+K S ++ ++N L +FG V +
Sbjct: 192 PRPLDQNPGAGLAAVVASCLSSGFAGVYFEKILKGS-SGSVWLRNLQLGLFGTALGLVGL 250
Query: 253 LVQDFDAVMNKGFFHGYSFITVLMIFNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAV 312
+ AV ++GFF GY+ ++ N A G+ V++V+KYADNI+K ++TS++++L+ V
Sbjct: 251 WWAEGTAVASQGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTV 310
Query: 313 VSVFLFGFHLSLAFFLGTIVVSVAIYLHS 341
S+ LFGFHL F LG +V A+YL+S
Sbjct: 311 ASIRLFGFHLDPLFALGAGLVIGAVYLYS 339
>ref|NP_001003058.1| CMP-sialic acid transporter [Canis familiaris]
gi|18252814|gb|AAL62490.1| CMP-sialic acid transporter
[Canis familiaris]
Length = 337
Score = 145 bits (365), Expect = 2e-33
Identities = 88/296 (29%), Positives = 160/296 (53%), Gaps = 9/296 (3%)
Query: 52 LTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVAL----GRIWNKEGVTDD 107
+T++ ++ I + +++ + K Y TTA + E +K +S+ L G + + +
Sbjct: 20 MTLVAAAYTIALRYTRTSDKELYFSTTAVCITEVIKLLLSVGILAKEAGSLGRFKASLKE 79
Query: 108 NRLTTTLDEVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGVLYRIILKK 167
N L + E++ +P+ +Y V+N + + + +DA YQ+ I T + ++L +
Sbjct: 80 NVLGSP-KELMKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNR 138
Query: 168 RLSEIQWAAFILLTAGCTTAQ---LNSNSDHVLQTPFQGWVMAIAMALLSGFAGVYTEAI 224
LS++QW + +L G Q + V Q P G+ L SGFAGVY E +
Sbjct: 139 TLSKLQWISVFMLCGGVILVQWKPAQATKVVVEQNPLLGFGAIAVAVLCSGFAGVYFEKV 198
Query: 225 IKKRPSRNINVQNFWLYVFGMGFNAVAILVQDFDAVMNKGFFHGYSFITVLMIFNHALSG 284
+K + ++ V+N +Y+ G+ V + + D + KGFF+GY++ +IF ++ G
Sbjct: 199 LKSSDT-SLWVRNIQMYLSGIVVTLVGVYLSDGAEINEKGFFYGYTYYVWFVIFLASVGG 257
Query: 285 IAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSVAIYLH 340
+ S+V+KY DNI+K +S + A++L+ SV LFG ++L F LGT++V V+IYL+
Sbjct: 258 LYTSVVVKYTDNIMKGFSAAAAIVLSTFASVMLFGLQITLTFALGTLLVCVSIYLY 313
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.137 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 525,526,336
Number of Sequences: 2540612
Number of extensions: 19764016
Number of successful extensions: 85968
Number of sequences better than 10.0: 278
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 85392
Number of HSP's gapped (non-prelim): 343
length of query: 347
length of database: 863,360,394
effective HSP length: 129
effective length of query: 218
effective length of database: 535,621,446
effective search space: 116765475228
effective search space used: 116765475228
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0380.6