BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0369c.6
(143 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB10609.1| histone H2B like protein [Arabidopsis thaliana] ... 241 3e-63
emb|CAA69025.1| histone H2B like protein [Arabidopsis thaliana] 240 6e-63
gb|AAB97163.1| histone H2B1 [Gossypium hirsutum] gi|7439759|pir|... 234 3e-61
emb|CAB88327.1| histone H2B-like protein [Arabidopsis thaliana] ... 230 5e-60
gb|AAV84518.1| At5g59910 [Arabidopsis thaliana] gi|9757912|dbj|B... 230 6e-60
gb|AAG48809.1| putative histone H2B protein [Arabidopsis thalian... 229 8e-60
gb|AAM66958.1| histone H2B [Arabidopsis thaliana] 229 8e-60
emb|CAA73156.1| histone H2B [Arabidopsis thaliana] gi|7339499|em... 229 1e-59
gb|AAM63259.1| histone H2B-like protein [Arabidopsis thaliana] 228 3e-59
emb|CAB88668.1| histone H2B [Cicer arietinum] 227 4e-59
emb|CAA12230.1| histone H2B-2 [Lycopersicon esculentum] gi|74397... 224 3e-58
emb|CAA12231.1| histone H2B-3 [Lycopersicon esculentum] gi|74397... 224 4e-58
emb|CAA72091.1| histone H2B1 [Nicotiana tabacum] gi|7387729|sp|P... 222 2e-57
emb|CAA57778.1| histone 2B [Asparagus officinalis] gi|629864|pir... 221 3e-57
dbj|BAA07156.1| protein H2B-6 [Triticum aestivum] gi|1362183|pir... 220 6e-57
gb|AAS20969.1| histone H2B [Hyacinthus orientalis] 219 8e-57
gb|AAB94923.1| histone H2B [Capsicum annuum] gi|7387727|sp|O4911... 219 1e-56
gb|AAM62619.1| putative histone H2B [Arabidopsis thaliana] gi|21... 219 1e-56
ref|XP_483094.1| putative Histone H2B.2 [Oryza sativa (japonica ... 218 2e-56
ref|NP_915412.1| putative histone H2B [Oryza sativa (japonica cu... 218 2e-56
>dbj|BAB10609.1| histone H2B like protein [Arabidopsis thaliana]
gi|15237148|ref|NP_197679.1| histone H2B, putative
[Arabidopsis thaliana]
Length = 145
Score = 241 bits (615), Expect = 3e-63
Identities = 130/146 (89%), Positives = 133/146 (91%), Gaps = 4/146 (2%)
Query: 1 MAKGDKKPAEKKPAA---AEEKAAAAEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYK 57
MAK DKKPAEKKPA A E AAAAEKKP+A KK+P KE AGDKKKKRSKKNVETYK
Sbjct: 1 MAKADKKPAEKKPAEKTPAAEPAAAAEKKPKAGKKLP-KEPAGAGDKKKKRSKKNVETYK 59
Query: 58 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 117
IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAV
Sbjct: 60 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAV 119
Query: 118 RLVLPGELAKHAVSEGTKAVTKFTSS 143
RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 RLVLPGELAKHAVSEGTKAVTKFTSS 145
>emb|CAA69025.1| histone H2B like protein [Arabidopsis thaliana]
Length = 145
Score = 240 bits (612), Expect = 6e-63
Identities = 129/146 (88%), Positives = 133/146 (90%), Gaps = 4/146 (2%)
Query: 1 MAKGDKKPAEKKPAA---AEEKAAAAEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYK 57
MAK DKKPAEKKPA A E AAAAEKKP+A KK+P + GA GDKKKKRSKKNVETYK
Sbjct: 1 MAKADKKPAEKKPAEKTPAAEPAAAAEKKPKAGKKLPEEPAGA-GDKKKKRSKKNVETYK 59
Query: 58 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 117
IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAV
Sbjct: 60 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAV 119
Query: 118 RLVLPGELAKHAVSEGTKAVTKFTSS 143
RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 RLVLPGELAKHAVSEGTKAVTKFTSS 145
>gb|AAB97163.1| histone H2B1 [Gossypium hirsutum] gi|7439759|pir||T09722 histone
H2B1 - upland cotton gi|7387726|sp|O22582|H2B_GOSHI
Histone H2B
Length = 147
Score = 234 bits (597), Expect = 3e-61
Identities = 125/145 (86%), Positives = 132/145 (90%), Gaps = 5/145 (3%)
Query: 3 KGDKKPAEKKPAAAEEKAAA----AEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYKI 58
K +KKPAEKKPA E+KA A AEKKP+A KK+P + G AAGDKKKKR KK+VETYKI
Sbjct: 4 KAEKKPAEKKPAE-EKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVETYKI 62
Query: 59 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 118
YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVR
Sbjct: 63 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVR 122
Query: 119 LVLPGELAKHAVSEGTKAVTKFTSS 143
LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 LVLPGELAKHAVSEGTKAVTKFTSS 147
>emb|CAB88327.1| histone H2B-like protein [Arabidopsis thaliana]
gi|21536602|gb|AAM60934.1| histone H2B-like protein
[Arabidopsis thaliana] gi|15231313|ref|NP_190189.1|
histone H2B, putative [Arabidopsis thaliana]
Length = 145
Score = 230 bits (587), Expect = 5e-60
Identities = 122/143 (85%), Positives = 128/143 (89%), Gaps = 3/143 (2%)
Query: 3 KGDKKPAEKKPAAAEEKA--AAAEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYKIYI 60
K +KKPAEKKP + KA A AEKKP+A KK+P KE GA GDKKKK KK+VETYKIYI
Sbjct: 4 KAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLP-KEAGAGGDKKKKMKKKSVETYKIYI 62
Query: 61 FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLV 120
FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLV
Sbjct: 63 FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLV 122
Query: 121 LPGELAKHAVSEGTKAVTKFTSS 143
LPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 LPGELAKHAVSEGTKAVTKFTSS 145
>gb|AAV84518.1| At5g59910 [Arabidopsis thaliana] gi|9757912|dbj|BAB08359.1| unnamed
protein product [Arabidopsis thaliana]
gi|15238563|ref|NP_200799.1| histone H2B [Arabidopsis
thaliana] gi|16323079|gb|AAL15274.1| AT5g59910/mmn10_130
[Arabidopsis thaliana] gi|27735192|sp|P40283|H2B_ARATH
Histone H2B
Length = 150
Score = 230 bits (586), Expect = 6e-60
Identities = 124/148 (83%), Positives = 132/148 (88%), Gaps = 8/148 (5%)
Query: 3 KGDKKPAEKKPAA---AEEKAAA----AEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVET 55
K +KKPAEKKPA+ EEK+ A AEKKP+A KK+P KE GA GDKKKK KK+VET
Sbjct: 4 KAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLP-KEAGAGGDKKKKMKKKSVET 62
Query: 56 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 115
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQT
Sbjct: 63 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQT 122
Query: 116 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 AVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>gb|AAG48809.1| putative histone H2B protein [Arabidopsis thaliana]
gi|22137246|gb|AAM91468.1| At1g07790/F24B9_10
[Arabidopsis thaliana] gi|8439888|gb|AAF75074.1| Strong
similarity to histone H2B like protein from Arabidopsis
thaliana gb|Y07745. ESTs gb|R83948 and gb|T42349 come
from this gene gi|17979526|gb|AAL50098.1|
At1g07790/F24B9_10 [Arabidopsis thaliana]
gi|15223016|ref|NP_172258.1| histone H2B, putative
[Arabidopsis thaliana] gi|25294271|pir||D86213
hypothetical protein [imported] - Arabidopsis thaliana
Length = 148
Score = 229 bits (585), Expect = 8e-60
Identities = 126/148 (85%), Positives = 131/148 (88%), Gaps = 10/148 (6%)
Query: 3 KGDKKPAEKKPAA---AEEKAAA----AEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVET 55
+ +KKPAEKK AA EE AA AEKKP+A KK+P KE AGDKKKKRSKKNVET
Sbjct: 4 RAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKE---AGDKKKKRSKKNVET 60
Query: 56 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 115
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQT
Sbjct: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
Query: 116 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>gb|AAM66958.1| histone H2B [Arabidopsis thaliana]
Length = 148
Score = 229 bits (585), Expect = 8e-60
Identities = 126/148 (85%), Positives = 131/148 (88%), Gaps = 10/148 (6%)
Query: 3 KGDKKPAEKKPAA---AEEKAAA----AEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVET 55
+ +KKPAEKK AA EE AA AEKKP+A KK+P KE AGDKKKKRSKKNVET
Sbjct: 4 RAEKKPAEKKTAAEKPVEENKAAEKAPAEKKPKAGKKLPPKE---AGDKKKKRSKKNVET 60
Query: 56 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 115
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQT
Sbjct: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
Query: 116 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>emb|CAA73156.1| histone H2B [Arabidopsis thaliana] gi|7339499|emb|CAB82822.1|
histone H2B [Arabidopsis thaliana]
gi|30102580|gb|AAP21208.1| At3g45980 [Arabidopsis
thaliana] gi|21592825|gb|AAM64775.1| histone H2B
[Arabidopsis thaliana] gi|15231304|ref|NP_190184.1|
histone H2B [Arabidopsis thaliana]
gi|11275242|pir||T47538 histone H2B - Arabidopsis
thaliana
Length = 150
Score = 229 bits (584), Expect = 1e-59
Identities = 124/148 (83%), Positives = 131/148 (87%), Gaps = 8/148 (5%)
Query: 3 KGDKKPAEKKPAA---AEEKAAA----AEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVET 55
+ +KKPAEKKPAA EEK+ A AEKKP+A KK+P KE GA GDKKKK KK+VET
Sbjct: 4 RAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLP-KEAGAGGDKKKKMKKKSVET 62
Query: 56 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 115
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQT
Sbjct: 63 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 122
Query: 116 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 AVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>gb|AAM63259.1| histone H2B-like protein [Arabidopsis thaliana]
Length = 150
Score = 228 bits (580), Expect = 3e-59
Identities = 123/148 (83%), Positives = 131/148 (88%), Gaps = 8/148 (5%)
Query: 3 KGDKKPAEKKPAA---AEEKAAA----AEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVET 55
K +KKPAEKKPA+ EEK+ A AEKKP+A KK+P KE GA GDKKKK KK+VET
Sbjct: 4 KAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLP-KEAGAGGDKKKKMKKKSVET 62
Query: 56 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 115
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNK PTITSREIQT
Sbjct: 63 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKXPTITSREIQT 122
Query: 116 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 AVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>emb|CAB88668.1| histone H2B [Cicer arietinum]
Length = 139
Score = 227 bits (579), Expect = 4e-59
Identities = 124/142 (87%), Positives = 130/142 (91%), Gaps = 6/142 (4%)
Query: 2 AKGDKKPAEKKPAAAEEKAAAAEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYKIYIF 61
AK +KKPAEKKPAA + A AEKKP+AEKKI +KEG DKKKKR KK+VETYKIYIF
Sbjct: 4 AKAEKKPAEKKPAAEK---APAEKKPKAEKKI-SKEG--TSDKKKKRVKKSVETYKIYIF 57
Query: 62 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 121
KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVL
Sbjct: 58 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVL 117
Query: 122 PGELAKHAVSEGTKAVTKFTSS 143
PGELAKHAVSEGTKAVTKFTSS
Sbjct: 118 PGELAKHAVSEGTKAVTKFTSS 139
>emb|CAA12230.1| histone H2B-2 [Lycopersicon esculentum] gi|7439753|pir||T06389
histone H2B-2 - tomato (fragment)
Length = 139
Score = 224 bits (571), Expect = 3e-58
Identities = 118/141 (83%), Positives = 127/141 (89%), Gaps = 4/141 (2%)
Query: 3 KGDKKPAEKKPAAAEEKAAAAEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYKIYIFK 62
K +KKPAEKKPA EEK A EK P+A KK+P + G + DKKKK+SKK++ETYKIYIFK
Sbjct: 3 KAEKKPAEKKPA--EEKKA--EKTPKAGKKLPKESGSSGADKKKKKSKKSIETYKIYIFK 58
Query: 63 VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 122
VLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTAVRLVLP
Sbjct: 59 VLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVLP 118
Query: 123 GELAKHAVSEGTKAVTKFTSS 143
GELAKHAVSEGTKAVTKFTSS
Sbjct: 119 GELAKHAVSEGTKAVTKFTSS 139
>emb|CAA12231.1| histone H2B-3 [Lycopersicon esculentum] gi|7439754|pir||T06390
histone H2B-3 - tomato (fragment)
Length = 137
Score = 224 bits (570), Expect = 4e-58
Identities = 120/139 (86%), Positives = 126/139 (90%), Gaps = 5/139 (3%)
Query: 5 DKKPAEKKPAAAEEKAAAAEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYKIYIFKVL 64
+KKPAEK P A + A AEKKP+A KK+P + AAGDKKKKRSKK VETYKIYIFKVL
Sbjct: 4 EKKPAEKTPVAEK---APAEKKPKAGKKLP--KDAAAGDKKKKRSKKAVETYKIYIFKVL 58
Query: 65 KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 124
KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 59 KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGE 118
Query: 125 LAKHAVSEGTKAVTKFTSS 143
LAKHAVSEGTKAVTKFTSS
Sbjct: 119 LAKHAVSEGTKAVTKFTSS 137
>emb|CAA72091.1| histone H2B1 [Nicotiana tabacum] gi|7387729|sp|P93354|H2B_TOBAC
Histone H2B gi|7439710|pir||T03268 histone H2B1 - common
tobacco
Length = 146
Score = 222 bits (565), Expect = 2e-57
Identities = 117/144 (81%), Positives = 129/144 (89%), Gaps = 4/144 (2%)
Query: 3 KGDKKPAEKKPAAAEE---KAAAAEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYKIY 59
+ DKKPAEKKP A + + A AEKKPRA KK+P ++ GAAGDKKKKR++ +VETYKIY
Sbjct: 4 RADKKPAEKKPGAEKTPVAEKAPAEKKPRAGKKLP-RDAGAAGDKKKKRAEMSVETYKIY 62
Query: 60 IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRL 119
IF+VLK VHPDIGISSKAMGIMNSFINDIFEKLA+ESSRLA YNKKPTI+SREIQTAVRL
Sbjct: 63 IFRVLKHVHPDIGISSKAMGIMNSFINDIFEKLARESSRLAGYNKKPTISSREIQTAVRL 122
Query: 120 VLPGELAKHAVSEGTKAVTKFTSS 143
VLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 VLPGELAKHAVSEGTKAVTKFTSS 146
>emb|CAA57778.1| histone 2B [Asparagus officinalis] gi|629864|pir||S48838 histone
H2B - garden asparagus
Length = 152
Score = 221 bits (563), Expect = 3e-57
Identities = 121/152 (79%), Positives = 130/152 (84%), Gaps = 14/152 (9%)
Query: 6 KKPAEKKPAA--------AEEKA--AAAEKKPRAEKKIPAKEGGA----AGDKKKKRSKK 51
KKPAEKKPAA AE+KA A A KKP+AEK++P+KEGG G KKK+ K
Sbjct: 1 KKPAEKKPAAEKPDEEPKAEKKAEKAPAGKKPKAEKRLPSKEGGGDKSGVGKAKKKKKAK 60
Query: 52 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 111
+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSR
Sbjct: 61 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSR 120
Query: 112 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 152
>dbj|BAA07156.1| protein H2B-6 [Triticum aestivum] gi|1362183|pir||S56684 histone
H2B-6 - wheat
Length = 136
Score = 220 bits (560), Expect = 6e-57
Identities = 115/135 (85%), Positives = 125/135 (92%), Gaps = 3/135 (2%)
Query: 9 AEKKPAAAEEKAAAAEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYKIYIFKVLKQVH 68
AEKKPAA E+K EKKP+AEK++P K+GGA DKKKK++KK+VETYKIYIFKVLKQVH
Sbjct: 5 AEKKPAA-EKKPVETEKKPKAEKRVPGKDGGA--DKKKKKAKKSVETYKIYIFKVLKQVH 61
Query: 69 PDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKH 128
PDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQTAVRLVLPGELAKH
Sbjct: 62 PDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVLPGELAKH 121
Query: 129 AVSEGTKAVTKFTSS 143
AVSEGTKAVTKFTSS
Sbjct: 122 AVSEGTKAVTKFTSS 136
>gb|AAS20969.1| histone H2B [Hyacinthus orientalis]
Length = 175
Score = 219 bits (559), Expect = 8e-57
Identities = 117/152 (76%), Positives = 128/152 (83%), Gaps = 14/152 (9%)
Query: 6 KKPAEKKPAAAEEKAAAAE-------------KKPRAEKKIPAKEGGAAGDKKKKRSK-K 51
+ P EKKPAAA++ A A+ KKP+AEKK+PAK+ AA DKKKK+ K K
Sbjct: 24 RSPREKKPAAADKPAGGAQGRSRRRPRRPPPGKKPKAEKKLPAKDAAAATDKKKKKKKGK 83
Query: 52 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 111
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR
Sbjct: 84 GVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 143
Query: 112 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
EIQT+VRLVLPGELAKHAVS+GTKAVTKFTS+
Sbjct: 144 EIQTSVRLVLPGELAKHAVSDGTKAVTKFTSA 175
>gb|AAB94923.1| histone H2B [Capsicum annuum] gi|7387727|sp|O49118|H2B_CAPAN
Histone H2B (CaH2B) gi|7439757|pir||T08063 histone H2B -
pepper
Length = 145
Score = 219 bits (558), Expect = 1e-56
Identities = 120/145 (82%), Positives = 126/145 (86%), Gaps = 7/145 (4%)
Query: 2 AKGDKKPAEKKPAAAEEKAAA---AEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVETYKI 58
A KKPAEKKP EEK A AEKKP+A KK+P G DKKKKR+KK++ETYKI
Sbjct: 5 AAAGKKPAEKKPV--EEKKAEEVPAEKKPKAGKKLPKDAGRP--DKKKKRAKKSIETYKI 60
Query: 59 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 118
YIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR
Sbjct: 61 YIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 120
Query: 119 LVLPGELAKHAVSEGTKAVTKFTSS 143
LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145
>gb|AAM62619.1| putative histone H2B [Arabidopsis thaliana]
gi|21700841|gb|AAM70544.1| At2g28720/T11P11.3
[Arabidopsis thaliana] gi|4580384|gb|AAD24363.1|
putative histone H2B [Arabidopsis thaliana]
gi|16209685|gb|AAL14400.1| At2g28720/T11P11.3
[Arabidopsis thaliana] gi|13272409|gb|AAK17143.1|
putative histone H2B [Arabidopsis thaliana]
gi|15226943|ref|NP_180440.1| histone H2B, putative
[Arabidopsis thaliana] gi|25294272|pir||D84688 probable
histone H2B [imported] - Arabidopsis thaliana
Length = 151
Score = 219 bits (557), Expect = 1e-56
Identities = 119/148 (80%), Positives = 126/148 (84%), Gaps = 7/148 (4%)
Query: 3 KGDKKPAEKKPA----AAEEKAAA---AEKKPRAEKKIPAKEGGAAGDKKKKRSKKNVET 55
K KKPAEKKPA A EEK A AEKKP+A KK+P + +KKKKR KK+ ET
Sbjct: 4 KAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKSTET 63
Query: 56 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 115
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQT
Sbjct: 64 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQT 123
Query: 116 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 124 AVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>ref|XP_483094.1| putative Histone H2B.2 [Oryza sativa (japonica cultivar-group)]
gi|42408493|dbj|BAD09673.1| putative Histone H2B.2
[Oryza sativa (japonica cultivar-group)]
Length = 150
Score = 218 bits (556), Expect = 2e-56
Identities = 116/147 (78%), Positives = 129/147 (86%), Gaps = 6/147 (4%)
Query: 3 KGDKKPAEKKPAA--AEEKAAAAEKKPRAEKKIPAKEGGAAGDKKK----KRSKKNVETY 56
K +KKPAEKKPA A EKA AA KKP+AEK++PA +G G+ KK K++KK+VETY
Sbjct: 4 KAEKKPAEKKPAEEKAGEKAPAAGKKPKAEKRLPASKGEKGGEGKKERGRKKAKKSVETY 63
Query: 57 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 116
KIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+
Sbjct: 64 KIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSREIQTS 123
Query: 117 VRLVLPGELAKHAVSEGTKAVTKFTSS 143
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 124 VRLVLPGELAKHAVSEGTKAVTKFTSS 150
>ref|NP_915412.1| putative histone H2B [Oryza sativa (japonica cultivar-group)]
gi|21104617|dbj|BAB93209.1| putative histone H2B [Oryza
sativa (japonica cultivar-group)]
gi|15623830|dbj|BAB67889.1| putative histone H2B [Oryza
sativa (japonica cultivar-group)]
Length = 139
Score = 218 bits (556), Expect = 2e-56
Identities = 120/143 (83%), Positives = 131/143 (90%), Gaps = 9/143 (6%)
Query: 3 KGDKKPAEKKPAAAEEKAAAAEKKPRAEKKIP-AKEGGAAGDKK-KKRSKKNVETYKIYI 60
K +KKPAEKKP EEKA EKKP+AEK++P AKEGG G+KK KK++KK+VETYKIYI
Sbjct: 4 KAEKKPAEKKPV--EEKA---EKKPKAEKRVPGAKEGG--GEKKGKKKAKKSVETYKIYI 56
Query: 61 FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLV 120
FKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLV
Sbjct: 57 FKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLV 116
Query: 121 LPGELAKHAVSEGTKAVTKFTSS 143
LPGELAKHAVSEGTKAVTKFTSS
Sbjct: 117 LPGELAKHAVSEGTKAVTKFTSS 139
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.308 0.125 0.326
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,414,598
Number of Sequences: 2540612
Number of extensions: 8035171
Number of successful extensions: 66524
Number of sequences better than 10.0: 1566
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 717
Number of HSP's that attempted gapping in prelim test: 57562
Number of HSP's gapped (non-prelim): 6987
length of query: 143
length of database: 863,360,394
effective HSP length: 119
effective length of query: 24
effective length of database: 561,027,566
effective search space: 13464661584
effective search space used: 13464661584
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0369c.6