BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0369c.1
(573 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 74 1e-11
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 69 3e-10
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 69 5e-10
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 61 9e-08
ref|NP_680680.1| reverse transcriptase-related [Arabidopsis thal... 61 9e-08
ref|NP_850866.1| reverse transcriptase-related [Arabidopsis thal... 56 3e-06
pir||A96682 protein F1E22.12 [imported] - Arabidopsis thaliana g... 56 3e-06
gb|AAX92970.1| retrotransposon protein, putative, unclassified [... 55 8e-06
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta... 54 1e-05
emb|CAB79491.1| putative protein [Arabidopsis thaliana] gi|30467... 54 2e-05
gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor] 54 2e-05
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ... 53 2e-05
ref|NP_680149.1| reverse transcriptase-related [Arabidopsis thal... 53 2e-05
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 52 4e-05
gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum] 52 7e-05
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 51 9e-05
dbj|BAB10772.1| unnamed protein product [Arabidopsis thaliana] 51 1e-04
ref|XP_470208.1| Putative retroelement [Oryza sativa (japonica c... 50 2e-04
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 50 2e-04
ref|NP_917200.1| P0707D10.17 [Oryza sativa (japonica cultivar-gr... 50 2e-04
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25408124|pir||C84716 hypothetical protein
At2g31080 [imported] - Arabidopsis thaliana
Length = 1231
Score = 74.3 bits (181), Expect = 1e-11
Identities = 44/123 (35%), Positives = 73/123 (58%), Gaps = 6/123 (4%)
Query: 1 ICITKEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNV 60
I ++ G +SH+ D ++LF S Q+++I + L+ F EASG KV+L+KS++F S+
Sbjct: 530 IAVSCGGSKLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHN 589
Query: 61 VDQRKQQELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDKGNSHLGRISF*IGPK 120
V + +Q +S GI LGKYL +P L+ R+ KE F ++++ ++ L G K
Sbjct: 590 VSREMEQLISEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLA------GWK 643
Query: 121 GRA 123
GR+
Sbjct: 644 GRS 646
Score = 51.2 bits (121), Expect = 9e-05
Identities = 23/65 (35%), Positives = 34/65 (51%), Gaps = 2/65 (3%)
Query: 363 IWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRRCPG-- 420
IWK E+V F+WL ++ + TN++R HL + C C + E + H LR CP
Sbjct: 906 IWKLITPERVRVFIWLVSQNVIMTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAME 965
Query: 421 SVWVR 425
+W R
Sbjct: 966 PIWRR 970
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana] gi|25411313|pir||C84487 hypothetical protein
At2g07650 [imported] - Arabidopsis thaliana
Length = 732
Score = 69.3 bits (168), Expect = 3e-10
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 1 ICITKEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNV 60
I +++ G +SH+ D ++LF S Q+++I + L+ F ASG KV+L+KS++F S
Sbjct: 192 ISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIFFSEN 251
Query: 61 VDQRKQQELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDKGNSHLGRISF*IGPK 120
V + + +S GI+ LGKYL +P L+ R+ K+ F I++K + L G K
Sbjct: 252 VSRDLGKLISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRLA------GWK 305
Query: 121 GR 122
GR
Sbjct: 306 GR 307
Score = 57.4 bits (137), Expect = 1e-06
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 363 IWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRRCPG-- 420
+W TA E+V FLWL + A+ TN +R+ HL C C + E + H LR CP
Sbjct: 568 VWSVTAPERVRLFLWLVAQQAIMTNQERHRRHLSTTTICQVCKGAKESIIHVLRDCPAME 627
Query: 421 SVWVR 425
+W+R
Sbjct: 628 GIWLR 632
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
gi|25407453|pir||H85088 hypothetical protein AT4g08830
[imported] - Arabidopsis thaliana
Length = 947
Score = 68.6 bits (166), Expect = 5e-10
Identities = 43/123 (34%), Positives = 71/123 (56%), Gaps = 6/123 (4%)
Query: 1 ICITKEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNV 60
I +++ G ISH+ D ++LF S Q+++I + L+ F ASG KV+L KS++F S
Sbjct: 344 IGLSQGGPKISHICFADDLILFAEASVSQIRVIRRILETFCIASGQKVSLDKSKIFFSKN 403
Query: 61 VDQRKQQELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDKGNSHLGRISF*IGPK 120
V + ++ +S GI LGKYL +P L+ R+ K+ F ++++ +S L G K
Sbjct: 404 VSRDLEKLISKESGIKSTRELGKYLGMPILQRRINKDTFGEVLERVSSRLA------GWK 457
Query: 121 GRA 123
GR+
Sbjct: 458 GRS 460
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25410938|pir||G84429 hypothetical protein
At2g01840 [imported] - Arabidopsis thaliana
Length = 1715
Score = 61.2 bits (147), Expect = 9e-08
Identities = 36/103 (34%), Positives = 52/103 (49%)
Query: 3 ITKEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVD 62
ITK+ + ISHL D L F SN ++ + K++ EASG K+N KS + +
Sbjct: 1031 ITKDCLAISHLLFADDSLFFCRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIP 1090
Query: 63 QRKQQELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDK 105
++Q L ++GI GKYL LP+ R E F I+ K
Sbjct: 1091 TMRRQRLHRLLGIDNVRGGGKYLGLPEQLGRRKVELFEYIVTK 1133
>ref|NP_680680.1| reverse transcriptase-related [Arabidopsis thaliana]
Length = 396
Score = 61.2 bits (147), Expect = 9e-08
Identities = 33/95 (34%), Positives = 47/95 (48%), Gaps = 7/95 (7%)
Query: 363 IWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRRCP--G 420
IW+ A E+V FLWL G A+ TN++R H+ D C C + E + H LR CP
Sbjct: 67 IWRVLAPERVRVFLWLVGNQAILTNVERARRHMGDTDVCQVCRGAKETIIHVLRDCPAMS 126
Query: 421 SVWVRSRFAKALPGLSAGALMTRSSMVL**DNLHE 455
+W+R +P TRS + +NLH+
Sbjct: 127 GIWLR-----LVPARERERFFTRSLLEWLYENLHQ 156
>ref|NP_850866.1| reverse transcriptase-related [Arabidopsis thaliana]
Length = 411
Score = 56.2 bits (134), Expect = 3e-06
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Query: 358 AVMKLIWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRR 417
A+ +W+ E+V F WL G A+ TN +R+ HL D C C VE H LR
Sbjct: 78 ALFGRVWRIKVPERVRVFFWLLGNQAIMTNEERHRRHLCASDLCEVCKGGVESAMHILRD 137
Query: 418 CP--GSVWVR 425
CP +W+R
Sbjct: 138 CPTMEGIWLR 147
>pir||A96682 protein F1E22.12 [imported] - Arabidopsis thaliana
gi|6686397|gb|AAF23831.1| F1E22.12 [Arabidopsis
thaliana]
Length = 1055
Score = 56.2 bits (134), Expect = 3e-06
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 363 IWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRRCPG-- 420
+WK E+V FLWL G A+ T +R+ HL + C C VE + H LR CP
Sbjct: 400 LWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQL 459
Query: 421 SVWVR 425
+WVR
Sbjct: 460 GIWVR 464
Score = 46.6 bits (109), Expect = 0.002
Identities = 28/83 (33%), Positives = 47/83 (55%)
Query: 1 ICITKEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNV 60
I +++ G +SH+ D ++LF S Q+Q++ + L+ F ASG KV+L+KS++F S
Sbjct: 107 INLSRGGPKLSHICFADDLILFAEASVEQVQIVRRVLEAFCTASGQKVSLEKSKIFFSKN 166
Query: 61 VDQRKQQELSIIVGITRASYLGK 83
V + + +S GI GK
Sbjct: 167 VSRELGKLISDESGIQSTCDWGK 189
>gb|AAX92970.1| retrotransposon protein, putative, unclassified [Oryza sativa
(japonica cultivar-group)] gi|62733927|gb|AAX96036.1|
retrotransposon protein, putative, unclassified [Oryza
sativa (japonica cultivar-group)]
Length = 796
Score = 54.7 bits (130), Expect = 8e-06
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 3 ITKEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVD 62
+ + GISHL D LLFF +N Q ++ + L ++ +G +N K M S+
Sbjct: 376 VCRRAPGISHLMFADDTLLFFKANNDQARVTKEVLHDYALGTGQLINPAKCSMLFSSATP 435
Query: 63 QRKQQELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDK 105
Q +S + +T S+ KYL P + R++K F + ++
Sbjct: 436 AEVQNSISNTLQLTNVSFENKYLGFPTPEGRLSKGKFQSLQER 478
>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25411326|pir||C84488 hypothetical protein
At2g07730 [imported] - Arabidopsis thaliana
Length = 970
Score = 54.3 bits (129), Expect = 1e-05
Identities = 25/68 (36%), Positives = 34/68 (49%), Gaps = 2/68 (2%)
Query: 360 MKLIWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRRCP 419
+K IWK A E+V F+WL + TN++R HL C C + E + H LR CP
Sbjct: 644 LKQIWKLVAPERVRVFIWLVSHMVIMTNVERVRRHLSDIATCSVCNGADESILHVLRDCP 703
Query: 420 G--SVWVR 425
+W R
Sbjct: 704 AMTPIWQR 711
Score = 53.1 bits (126), Expect = 2e-05
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 29 QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVDQRKQQELSIIVGITRASYLGKYLDLP 88
Q+ +I + L++F EASG V+L+KS++ SN V + ++ +S GI LGKYL +P
Sbjct: 390 QILIIRRVLEQFCEASGQNVSLEKSKIVFSNNVSRDMERLISGESGIGCTRELGKYLGMP 449
Query: 89 QLKARVTKEHFAPIIDKGNSHL 110
L+ R+ KE +++ +S L
Sbjct: 450 ILQKRMNKETSGEVLEHVSSSL 471
>emb|CAB79491.1| putative protein [Arabidopsis thaliana] gi|3046704|emb|CAA18234.1|
putative protein [Arabidopsis thaliana]
gi|7486787|pir||T05068 hypothetical protein M3E9.210 -
Arabidopsis thaliana
Length = 1141
Score = 53.5 bits (127), Expect = 2e-05
Identities = 31/98 (31%), Positives = 54/98 (54%), Gaps = 2/98 (2%)
Query: 8 IGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVDQRKQQ 67
+ ISHL D V++FF + L I +TL++F SG+KVN KS FC+ ++Q ++
Sbjct: 668 LSISHLMFADDVMIFFDGGSSSLHGICETLEDFASWSGLKVNNDKSHFFCAG-LEQAERN 726
Query: 68 ELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDK 105
L+ G + +YL LP + ++ + P+++K
Sbjct: 727 SLA-AYGFPQGCLPIRYLGLPLMCRKLRIAEYEPLLEK 763
>gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor]
Length = 1998
Score = 53.5 bits (127), Expect = 2e-05
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 17 DGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVDQRKQQELSIIVGIT 76
D L+ QL ++ + F EA+G+KVNLQKS M N +D+ + L+ G +
Sbjct: 1494 DDTLIIAEGDTRQLLILKSIINTFSEATGLKVNLQKSMMLPIN-MDEERLDTLARTFGCS 1552
Query: 77 RASYLGKYLDLPQLKARVTKEHFAPIIDKGNSHLGRISF*IGPKGR 122
+ S+ YL LP + T + + P+I+K + LG ++ + GR
Sbjct: 1553 KGSFPFTYLGLPLGITKPTIQDYQPLINKCEARLGSVATFLSEAGR 1598
>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 53.1 bits (126), Expect = 2e-05
Identities = 22/65 (33%), Positives = 32/65 (48%), Gaps = 2/65 (3%)
Query: 363 IWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRRCPG-- 420
+W+ E+ FLWL G + TN +R H+ D C C + E + H LR CP
Sbjct: 347 VWRVMVPERARIFLWLVGNQVVLTNAERVRRHMADSDVCPLCKGASESLIHVLRDCPAMM 406
Query: 421 SVWVR 425
+W+R
Sbjct: 407 GIWMR 411
>ref|NP_680149.1| reverse transcriptase-related [Arabidopsis thaliana]
Length = 594
Score = 53.1 bits (126), Expect = 2e-05
Identities = 22/65 (33%), Positives = 32/65 (48%), Gaps = 2/65 (3%)
Query: 363 IWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRRCPG-- 420
+W+ E+ FLWL G + TN +R H+ D C C + E + H LR CP
Sbjct: 334 VWRVMVPERARIFLWLVGNQVVLTNAERVRRHMADSDVCPLCKGASESLIHVLRDCPAMM 393
Query: 421 SVWVR 425
+W+R
Sbjct: 394 GIWMR 398
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25411805|pir||C84554 hypothetical protein
At2g17610 [imported] - Arabidopsis thaliana
Length = 773
Score = 52.4 bits (124), Expect = 4e-05
Identities = 29/90 (32%), Positives = 46/90 (50%)
Query: 4 TKEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVDQ 63
++ G ISHL L+F + + + LK + +ASG VN QKS + +D
Sbjct: 125 SRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILFGKGLDF 184
Query: 64 RKQQELSIIVGITRASYLGKYLDLPQLKAR 93
R ++LS ++GI + G+YL LP+ R
Sbjct: 185 RTSEQLSQLLGIYKTEGFGRYLGLPEFVGR 214
Score = 52.0 bits (123), Expect = 5e-05
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 363 IWKATAAEKVMFFLWLAGRDALPT--NMKRYHSHLVKFDACFRCGASVEDVEHALRRCPG 420
IWK A K+ F W + +ALPT N+KR L+ D C RCG + EDV H L +C
Sbjct: 501 IWKQNAPPKIKHFWWRSAHNALPTAGNLKR--RRLITDDTCQRCGEASEDVNHLLFQCRV 558
Query: 421 S--VWVRSRFAKALPG 434
S +W ++ K PG
Sbjct: 559 SKEIWEQAHI-KLCPG 573
>gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum]
Length = 237
Score = 51.6 bits (122), Expect = 7e-05
Identities = 31/101 (30%), Positives = 53/101 (51%)
Query: 5 KEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVDQR 64
K G +SHLF D LLF S + + L + + G K+N+ KS +F + +++
Sbjct: 3 KYGPPLSHLFFADDCLLFLKDSVESIPTLLHVLTTYEKVLGQKINVTKSSIFFAKSMNEM 62
Query: 65 KQQELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDK 105
++Q + + + R+S G+YL LP L R +E F + D+
Sbjct: 63 RKQAIVRQLHMPRSSGDGRYLGLPYLVGRSKREIFQYLKDR 103
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 51.2 bits (121), Expect = 9e-05
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 8 IGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVDQRKQQ 67
+ ISHL D V++FF + + I +TL +F + SG+KVN KS++F + + ++
Sbjct: 550 LSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL--DLSER 607
Query: 68 ELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDKGNSHL 110
S G ++ +YL LP + ++ + P+++K ++ L
Sbjct: 608 ITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARL 650
>dbj|BAB10772.1| unnamed protein product [Arabidopsis thaliana]
Length = 171
Score = 50.8 bits (120), Expect = 1e-04
Identities = 27/80 (33%), Positives = 41/80 (50%)
Query: 10 ISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVDQRKQQEL 69
++HL VD L F S Q +I + LK + SG ++N KS + + VD + E+
Sbjct: 10 VTHLLFVDDSLFFCKASKKQCGVILEILKHYETVSGQQINFTKSSIQFGHKVDDSLKAEI 69
Query: 70 SIIVGITRASYLGKYLDLPQ 89
+GIT +G YL LP+
Sbjct: 70 KATLGITNLGGMGSYLGLPE 89
>ref|XP_470208.1| Putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|27497213|gb|AAO17357.1| Putative retroelement [Oryza
sativa (japonica cultivar-group)]
gi|15451617|gb|AAK98741.1| Hypothetical protein similar
to putative retroelements [Oryza sativa]
Length = 387
Score = 50.4 bits (119), Expect = 2e-04
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 363 IWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRRCP 419
IW++ A +V FF WL ++ LPT + + ++ C C A++ED H RCP
Sbjct: 229 IWRSAAPPRVKFFAWLMSKNRLPTRVNLHKKTILPTPTCELCNANLEDTYHIFLRCP 285
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana] gi|7485171|pir||G71420
hypothetical protein - Arabidopsis thaliana
Length = 929
Score = 50.1 bits (118), Expect = 2e-04
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 1 ICITKEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNV 60
I I++ G +SH+ D ++LF S Q KV+L+KS++F SN
Sbjct: 482 ISISQGGPKVSHVCFADDLILFAEASVAQ-----------------KVSLEKSKIFFSNN 524
Query: 61 VDQRKQQELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDKGNSHL 110
V + + ++ GI LGKYL +P L+ R+ K+ F ++++ +S L
Sbjct: 525 VSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKDTFGEVLERVSSRL 574
Score = 40.8 bits (94), Expect = 0.12
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 361 KLIWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFR 403
K IW A E+V FLWL G+ + TN++R H+ + C R
Sbjct: 822 KRIWGVIAPERVRVFLWLVGQQVIMTNVERVRRHIGDIEVCQR 864
>ref|NP_917200.1| P0707D10.17 [Oryza sativa (japonica cultivar-group)]
Length = 892
Score = 50.1 bits (118), Expect = 2e-04
Identities = 23/58 (39%), Positives = 29/58 (49%)
Query: 362 LIWKATAAEKVMFFLWLAGRDALPTNMKRYHSHLVKFDACFRCGASVEDVEHALRRCP 419
LIW+ A +KV F W A + L T + L + D C CG ED +H L RCP
Sbjct: 554 LIWQTNAPQKVRIFAWRAATNCLATMENKAKRKLEQSDICLVCGLEKEDTKHVLCRCP 611
Score = 47.8 bits (112), Expect = 0.001
Identities = 25/103 (24%), Positives = 48/103 (46%)
Query: 3 ITKEGIGISHLFCVDGVLLFFPVSN*QLQLITQTLKEFFEASGMKVNLQKSRMFCSNVVD 62
I ++ GISHL D LLFF N Q Q + + + ++ A+G +N K +
Sbjct: 180 ICRQAPGISHLLFADDTLLFFKADNVQAQAVKEVITDYALATGQLINPAKCSIMFGESSP 239
Query: 63 QRKQQELSIIVGITRASYLGKYLDLPQLKARVTKEHFAPIIDK 105
+ + + + + I + + +YL P + R+ K F + ++
Sbjct: 240 PQTRDVIRVTLQIANSGFEDRYLGFPTPEGRMCKGKFQSLQER 282
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.339 0.147 0.499
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 899,786,169
Number of Sequences: 2540612
Number of extensions: 33919995
Number of successful extensions: 83366
Number of sequences better than 10.0: 175
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 83127
Number of HSP's gapped (non-prelim): 279
length of query: 573
length of database: 863,360,394
effective HSP length: 133
effective length of query: 440
effective length of database: 525,458,998
effective search space: 231201959120
effective search space used: 231201959120
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0369c.1