BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0367.7
(172 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO17013.1| Putative thymidine kinase [Oryza sativa (japonica... 270 1e-71
gb|AAC31168.1| thymidine kinase [Oryza sativa] gi|7489561|pir||T... 270 1e-71
gb|AAQ08180.1| TK1-like deoxyribonucleoside kinase [Lycopersicon... 265 3e-70
dbj|BAB09824.1| unnamed protein product [Arabidopsis thaliana] 249 2e-65
ref|NP_568426.1| thymidine kinase, putative [Arabidopsis thaliana] 249 2e-65
gb|AAF13097.1| putative thymidine kinase [Arabidopsis thaliana] ... 243 1e-63
gb|AAM63086.1| putative thymidine kinase [Arabidopsis thaliana] 243 1e-63
gb|AAL69802.1| SPV063 thymidine kinase [Swinepox virus] gi|66684... 131 7e-30
pir||KIVZSW thymidine kinase (EC 2.7.1.21) - swinepox virus gi|3... 131 7e-30
emb|CAC21304.1| 66R protein [Yaba-like disease virus] gi|1208504... 122 3e-27
emb|CAB89611.1| possible thymidine kinase [Leishmania major] 119 3e-26
ref|XP_655924.1| thymidine kinase, putative [Entamoeba histolyti... 119 3e-26
emb|CAB54679.1| M2R protein [Variola minor virus] gi|7519929|pir... 117 1e-25
ref|NP_042123.1| L2R [Variola virus] gi|297259|emb|CAA49020.1| L... 117 1e-25
ref|NP_033413.1| thymidine kinase 1 [Mus musculus] gi|418625|pir... 117 1e-25
gb|AAA40451.1| cytosolic thymidine kinase 117 1e-25
gb|AAH12215.1| Thymidine kinase 1 [Mus musculus] gi|298946|gb|AA... 117 1e-25
gb|AAH91758.1| Thymidine kinase 1 [Mus musculus] 117 1e-25
gb|AAA40452.1| cytosolic thymidine kinase 117 1e-25
gb|AAM92382.1| EVM078 [Ectromelia virus] gi|22164683|ref|NP_6715... 116 3e-25
>gb|AAO17013.1| Putative thymidine kinase [Oryza sativa (japonica cultivar-group)]
Length = 270
Score = 270 bits (690), Expect = 1e-71
Identities = 125/166 (75%), Positives = 147/166 (88%)
Query: 1 NVAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFF 60
NVA+IKS KD RYGLDS+VTHDGTK+PCWAL LSSF+ K G +AY+++DVIGIDEAQFF
Sbjct: 97 NVALIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFF 156
Query: 61 DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
DDL+DFC +AAD DGK VVVAGLDG+Y R FGSVLDIIPLADSVTKLTARCE+CG+ AF
Sbjct: 157 DDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAF 216
Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYVNGQVAMETTRLVLESQK 166
FTLRKT+ET+ ELIGG DVYMPVCRQHY++GQ+ +E TR+VL+ +K
Sbjct: 217 FTLRKTRETKTELIGGADVYMPVCRQHYLDGQIVIEATRIVLDLEK 262
>gb|AAC31168.1| thymidine kinase [Oryza sativa] gi|7489561|pir||T02888 thymidine
kinase (EC 2.7.1.21) [similarity] - rice
gi|7674094|sp|O81263|KITH_ORYSA Thymidine kinase
Length = 212
Score = 270 bits (690), Expect = 1e-71
Identities = 125/166 (75%), Positives = 147/166 (88%)
Query: 1 NVAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFF 60
NVA+IKS KD RYGLDS+VTHDGTK+PCWAL LSSF+ K G +AY+++DVIGIDEAQFF
Sbjct: 39 NVALIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFF 98
Query: 61 DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
DDL+DFC +AAD DGK VVVAGLDG+Y R FGSVLDIIPLADSVTKLTARCE+CG+ AF
Sbjct: 99 DDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAF 158
Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYVNGQVAMETTRLVLESQK 166
FTLRKT+ET+ ELIGG DVYMPVCRQHY++GQ+ +E TR+VL+ +K
Sbjct: 159 FTLRKTRETKTELIGGADVYMPVCRQHYLDGQIVIEATRIVLDLEK 204
>gb|AAQ08180.1| TK1-like deoxyribonucleoside kinase [Lycopersicon esculentum]
Length = 234
Score = 265 bits (678), Expect = 3e-70
Identities = 122/167 (73%), Positives = 145/167 (86%)
Query: 1 NVAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFF 60
NV +IKSSKD RY +D++VTHDGT+ PCW+L +LSSFKQ+FG DAYE++DVIGIDEAQFF
Sbjct: 55 NVVLIKSSKDARYAVDAVVTHDGTRFPCWSLPDLSSFKQRFGKDAYEKVDVIGIDEAQFF 114
Query: 61 DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
DLY+FC AAD DGK +VVAGLDG+YLR++FGSVLDIIPLAD+VTKLTARCE+C + AF
Sbjct: 115 GDLYEFCCNAADFDGKIIVVAGLDGDYLRKSFGSVLDIIPLADTVTKLTARCELCNRRAF 174
Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYVNGQVAMETTRLVLESQKV 167
FT RKT ET+ ELIGG D+YMPVCRQHYVNGQ E+ ++VLES KV
Sbjct: 175 FTFRKTNETETELIGGADIYMPVCRQHYVNGQSVNESAKMVLESHKV 221
>dbj|BAB09824.1| unnamed protein product [Arabidopsis thaliana]
Length = 277
Score = 249 bits (637), Expect = 2e-65
Identities = 117/164 (71%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
Query: 2 VAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYE-QLDVIGIDEAQFF 60
+AIIKS+KDTRY +SIVTHDG K PCW+L +LSSFK++FG D YE +LDVIGIDEAQFF
Sbjct: 103 IAIIKSNKDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFF 162
Query: 61 DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
DLY+FCREAAD +GKTV+VAGLDG+++RR FGSVLD+IP+AD+VTKLT+RCE+CGK A
Sbjct: 163 GDLYEFCREAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRAL 222
Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYVNGQVAMETTRLVLES 164
FT+RKT+E + ELIGG +VYMPVCR HYV GQ +ET R VL+S
Sbjct: 223 FTMRKTEEKETELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 266
>ref|NP_568426.1| thymidine kinase, putative [Arabidopsis thaliana]
Length = 282
Score = 249 bits (637), Expect = 2e-65
Identities = 117/164 (71%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
Query: 2 VAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYE-QLDVIGIDEAQFF 60
+AIIKS+KDTRY +SIVTHDG K PCW+L +LSSFK++FG D YE +LDVIGIDEAQFF
Sbjct: 108 IAIIKSNKDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFF 167
Query: 61 DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
DLY+FCREAAD +GKTV+VAGLDG+++RR FGSVLD+IP+AD+VTKLT+RCE+CGK A
Sbjct: 168 GDLYEFCREAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRAL 227
Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYVNGQVAMETTRLVLES 164
FT+RKT+E + ELIGG +VYMPVCR HYV GQ +ET R VL+S
Sbjct: 228 FTMRKTEEKETELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 271
>gb|AAF13097.1| putative thymidine kinase [Arabidopsis thaliana]
gi|6648192|gb|AAF21190.1| putative thymidine kinase
[Arabidopsis thaliana] gi|23296948|gb|AAN13208.1|
putative thymidine kinase [Arabidopsis thaliana]
gi|13878163|gb|AAK44159.1| putative thymidine kinase
[Arabidopsis thaliana] gi|15231872|ref|NP_187437.1|
thymidine kinase, putative [Arabidopsis thaliana]
Length = 238
Score = 243 bits (621), Expect = 1e-63
Identities = 112/163 (68%), Positives = 137/163 (83%)
Query: 1 NVAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFF 60
+VA++KSSKDTRY DS+VTHDG PCWAL +L SF +KFG+DAY +LDVIGIDEAQFF
Sbjct: 61 SVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSFPEKFGLDAYNKLDVIGIDEAQFF 120
Query: 61 DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
DLY+FC + AD DGK V+VAGLDG+YLRR+FG+VLDIIP+ADSVTKLTARCE+CG AF
Sbjct: 121 GDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTKLTARCEVCGHKAF 180
Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYVNGQVAMETTRLVLE 163
FTLRK +T+ ELIGG DVYMPVCR+HY+ + ++ ++ VLE
Sbjct: 181 FTLRKNCDTRTELIGGADVYMPVCRKHYITNHIVIKASKKVLE 223
>gb|AAM63086.1| putative thymidine kinase [Arabidopsis thaliana]
Length = 238
Score = 243 bits (621), Expect = 1e-63
Identities = 112/163 (68%), Positives = 137/163 (83%)
Query: 1 NVAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFF 60
+VA++KSSKDTRY DS+VTHDG PCWAL +L SF +KFG+DAY +LDVIGIDEAQFF
Sbjct: 61 SVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSFPEKFGLDAYNKLDVIGIDEAQFF 120
Query: 61 DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
DLY+FC + AD DGK V+VAGLDG+YLRR+FG+VLDIIP+ADSVTKLTARCE+CG AF
Sbjct: 121 GDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTKLTARCEVCGHKAF 180
Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYVNGQVAMETTRLVLE 163
FTLRK +T+ ELIGG DVYMPVCR+HY+ + ++ ++ VLE
Sbjct: 181 FTLRKNCDTRTELIGGADVYMPVCRKHYITNHIVIKASKKVLE 223
>gb|AAL69802.1| SPV063 thymidine kinase [Swinepox virus] gi|66684|pir||KIVZSK
thymidine kinase (EC 2.7.1.21) - swinepox virus (strain
Kasza) gi|18640149|ref|NP_570223.1| SPV063 thymidine
kinase [Swinepox virus] gi|335134|gb|AAA47894.1|
thymidine kinase
Length = 181
Score = 131 bits (330), Expect = 7e-30
Identities = 66/149 (44%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 1 NVAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFF 60
N +IK SKD RYG D++ THD + + +L K D + +D++GIDE QFF
Sbjct: 38 NCRVIKYSKDNRYGNDAVYTHDKCYISAVSTDSLFDIK-----DTLDDVDIVGIDEGQFF 92
Query: 61 DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
+D+ +FC A+ GK V+VA LDG Y R+ FG++L++IPL++ VTKL A C IC + A
Sbjct: 93 NDIVEFCEYIANK-GKIVIVAALDGTYERKPFGNILNLIPLSEKVTKLNAICMICHRDAS 151
Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYV 149
F+ R + E ++ELIGG + Y+ VCR Y+
Sbjct: 152 FSKRLSDEKEIELIGGKEKYLSVCRSCYL 180
>pir||KIVZSW thymidine kinase (EC 2.7.1.21) - swinepox virus
gi|335130|gb|AAA47891.1| thymidine kinase
gi|125459|sp|P23335|KITH_SWPVK Thymidine kinase
Length = 177
Score = 131 bits (330), Expect = 7e-30
Identities = 66/149 (44%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 1 NVAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFF 60
N +IK SKD RYG D++ THD + + +L K D + +D++GIDE QFF
Sbjct: 34 NCRVIKYSKDNRYGNDAVYTHDKCYISAVSTDSLFDIK-----DTLDDVDIVGIDEGQFF 88
Query: 61 DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
+D+ +FC A+ GK V+VA LDG Y R+ FG++L++IPL++ VTKL A C IC + A
Sbjct: 89 NDIVEFCEYIANK-GKIVIVAALDGTYERKPFGNILNLIPLSEKVTKLNAICMICHRDAS 147
Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYV 149
F+ R + E ++ELIGG + Y+ VCR Y+
Sbjct: 148 FSKRLSDEKEIELIGGKEKYLSVCRSCYL 176
>emb|CAC21304.1| 66R protein [Yaba-like disease virus] gi|12085049|ref|NP_073451.1|
66R protein [Yaba-like disease virus]
Length = 183
Score = 122 bits (307), Expect = 3e-27
Identities = 69/145 (47%), Positives = 91/145 (62%), Gaps = 7/145 (4%)
Query: 4 IIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFFDDL 63
+IK SKDTRYG +VTHD +P + +LS + D + DVIGIDE QFF D+
Sbjct: 39 VIKYSKDTRYG-KGLVTHDNNSIPAIPVNSLS----EINCDKIKA-DVIGIDEGQFFPDI 92
Query: 64 YDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFTL 123
+FC A+ DGK V+VA LDG +LR FG++L +IP A+ V+KLTA C C A F+
Sbjct: 93 VEFCERMAN-DGKIVIVAALDGTFLREPFGNILKLIPCAEYVSKLTAVCMNCFNSASFSK 151
Query: 124 RKTQETQVELIGGVDVYMPVCRQHY 148
R E ++E+IGG D Y VCR+ Y
Sbjct: 152 RIGDEQEIEVIGGKDKYQSVCRKCY 176
>emb|CAB89611.1| possible thymidine kinase [Leishmania major]
Length = 284
Score = 119 bits (298), Expect = 3e-26
Identities = 68/166 (40%), Positives = 99/166 (58%), Gaps = 12/166 (7%)
Query: 4 IIKSSKDTRYGLDSIVTHDGTKLPCWA-LANLSSFKQKFGVDAYEQLDVIGIDEAQFFDD 62
+IK SKDTRY ++ +HD L A ++ L+ + D +++ DV+ IDE QFF D
Sbjct: 37 VIKYSKDTRYDEHNVASHDQLMLRAQAAVSQLTEVR-----DTWKRFDVLAIDEGQFFSD 91
Query: 63 LYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKH-AFF 121
L DFC AAD GK V+V+ LDG+Y R+ FG + +++P ++V KLTA C +C + A F
Sbjct: 92 LVDFCNTAADA-GKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVCMMCHEQPACF 150
Query: 122 TLRKTQETQVELIGGVDVYMPVCRQHYVNGQV----AMETTRLVLE 163
T R Q ELIGG D+Y+ CR+ Y Q+ M T R+ ++
Sbjct: 151 TRRTVNVEQQELIGGADMYIATCRECYSKQQLPSIEEMRTQRMAIK 196
>ref|XP_655924.1| thymidine kinase, putative [Entamoeba histolytica HM-1:IMSS]
gi|56473092|gb|EAL50538.1| thymidine kinase, putative
[Entamoeba histolytica HM-1:IMSS]
gi|44804740|gb|AAS47703.1| thymidine kinase [Entamoeba
histolytica]
Length = 218
Score = 119 bits (298), Expect = 3e-26
Identities = 67/159 (42%), Positives = 94/159 (58%), Gaps = 7/159 (4%)
Query: 4 IIKSSKDTRYGL-DSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFFDD 62
+IK SKDTRYG D ++HD W + + K ++ +VIGIDE QFF D
Sbjct: 57 VIKYSKDTRYGSEDEAISHDKES---WKA--IPTMKLMPVLETALNYEVIGIDEGQFFPD 111
Query: 63 LYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFT 122
L +F A + G+ V++A LDG + R+ FG + D+IPL +SV KL+A C CGK A F+
Sbjct: 112 LIEFSEACASY-GRLVIIAALDGTFQRKPFGQITDLIPLCESVKKLSAVCVNCGKKAAFS 170
Query: 123 LRKTQETQVELIGGVDVYMPVCRQHYVNGQVAMETTRLV 161
LR + E +E+IGGVD Y VCR+ + ++T R V
Sbjct: 171 LRTSSEESIEVIGGVDKYCAVCRKCFYKDGATLKTQRSV 209
>emb|CAB54679.1| M2R protein [Variola minor virus] gi|7519929|pir||E72160 thymidine
kinase (EC 2.7.1.21) [similarity] - variola minor virus
(strain Garcia-1966)
Length = 177
Score = 117 bits (294), Expect = 1e-25
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 7/146 (4%)
Query: 5 IKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFFDDLY 64
IK S D RYG + THD L ++A VIGIDE QFF D+
Sbjct: 38 IKYSNDNRYGT-GLWTHDKNNFEALEATKLCDV-----LEAITDFSVIGIDEGQFFPDIV 91
Query: 65 DFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFTLR 124
+FC A+ +GK V+VA LDG + R+ F ++LD+IPL++ V KLTA C C K A F+ R
Sbjct: 92 EFCERMAN-EGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKR 150
Query: 125 KTQETQVELIGGVDVYMPVCRQHYVN 150
ET++E+IGG+D+Y VCR+ Y++
Sbjct: 151 LGAETKIEIIGGIDMYQSVCRKCYID 176
>ref|NP_042123.1| L2R [Variola virus] gi|297259|emb|CAA49020.1| L2R [Variola virus]
gi|62355|emb|CAA47578.1| thymidine kinase [Variola
virus] gi|262438|gb|AAB24675.1| thymidine kinase
[Variola major virus] gi|7461085|pir||T28517 thymidine
kinase (EC 2.7.1.21) [similarity] - variola major virus
gi|438997|gb|AAA60827.1| homolog of vaccinia virus CDS
J2R (thymidine kinase); putative
gi|417222|sp|P04364|KITH_VARV Thymidine kinase
gi|745197|prf||2015436CN L2R gene
Length = 177
Score = 117 bits (294), Expect = 1e-25
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 7/146 (4%)
Query: 5 IKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFFDDLY 64
IK S D RYG + THD L ++A VIGIDE QFF D+
Sbjct: 38 IKYSNDNRYGT-GLWTHDKNNFEALEATKLCDV-----LEAITDFSVIGIDEGQFFPDIV 91
Query: 65 DFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFTLR 124
+FC A+ +GK V+VA LDG + R+ F ++LD+IPL++ V KLTA C C K A F+ R
Sbjct: 92 EFCERMAN-EGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKR 150
Query: 125 KTQETQVELIGGVDVYMPVCRQHYVN 150
ET++E+IGG+D+Y VCR+ Y++
Sbjct: 151 LGTETKIEIIGGIDMYQSVCRKCYID 176
>ref|NP_033413.1| thymidine kinase 1 [Mus musculus] gi|418625|pir||KIMST thymidine
kinase (EC 2.7.1.21), cytosolic - mouse
gi|266421|sp|P04184|KITH_MOUSE Thymidine kinase,
cytosolic gi|202079|gb|AAA40454.1| thymidine kinase
Length = 233
Score = 117 bits (293), Expect = 1e-25
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 9/146 (6%)
Query: 4 IIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQK-FGVDAYEQLDVIGIDEAQFFDD 62
+IK +KDTRY +S THD + L Q+ GV VIGIDE QFF D
Sbjct: 52 VIKYAKDTRYS-NSFSTHDRNTMDALPACMLRDVTQEALGVA------VIGIDEGQFFPD 104
Query: 63 LYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFT 122
+ DFC A+ +GKTV+VA LDG + R+ FGS+L+++PLA+SV KLTA C C + A +T
Sbjct: 105 IVDFCEMMAN-EGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYT 163
Query: 123 LRKTQETQVELIGGVDVYMPVCRQHY 148
R E +VE+IGG D Y VCR Y
Sbjct: 164 KRLGLEKEVEVIGGADKYHSVCRLCY 189
>gb|AAA40451.1| cytosolic thymidine kinase
Length = 233
Score = 117 bits (293), Expect = 1e-25
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 9/146 (6%)
Query: 4 IIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKF-GVDAYEQLDVIGIDEAQFFDD 62
+IK +KDTRY +S THD + L Q+ GV VIGIDE QFF D
Sbjct: 52 VIKYAKDTRYS-NSFSTHDRNTMDALPACMLRDVTQELLGVA------VIGIDEGQFFPD 104
Query: 63 LYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFT 122
+ DFC A+ +GKTV+VA LDG + R+ FGS+L+++PLA+SV KLTA C C + A +T
Sbjct: 105 IVDFCEMMAN-EGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYT 163
Query: 123 LRKTQETQVELIGGVDVYMPVCRQHY 148
R E +VE+IGG D Y VCR Y
Sbjct: 164 KRLGLEKEVEVIGGADKYHSVCRLCY 189
>gb|AAH12215.1| Thymidine kinase 1 [Mus musculus] gi|298946|gb|AAB26001.1|
thymidine kinase [Mus sp.] gi|252871|gb|AAB22782.1|
thymidine kinase, TK {EC 2.7.1.21} [mice, Peptide, 233
aa] gi|26352894|dbj|BAC40077.1| unnamed protein product
[Mus musculus] gi|737917|prf||1923398A thymidine kinase
Length = 233
Score = 117 bits (293), Expect = 1e-25
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 9/146 (6%)
Query: 4 IIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQK-FGVDAYEQLDVIGIDEAQFFDD 62
+IK +KDTRY +S THD + L Q+ GV VIGIDE QFF D
Sbjct: 52 VIKYAKDTRYS-NSFSTHDRNTMDALPACMLRDVTQESLGVA------VIGIDEGQFFPD 104
Query: 63 LYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFT 122
+ DFC A+ +GKTV+VA LDG + R+ FGS+L+++PLA+SV KLTA C C + A +T
Sbjct: 105 IVDFCEMMAN-EGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYT 163
Query: 123 LRKTQETQVELIGGVDVYMPVCRQHY 148
R E +VE+IGG D Y VCR Y
Sbjct: 164 KRLGLEKEVEVIGGADKYHSVCRLCY 189
>gb|AAH91758.1| Thymidine kinase 1 [Mus musculus]
Length = 233
Score = 117 bits (293), Expect = 1e-25
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 9/146 (6%)
Query: 4 IIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQK-FGVDAYEQLDVIGIDEAQFFDD 62
+IK +KDTRY +S THD + L Q+ GV VIGIDE QFF D
Sbjct: 52 VIKYAKDTRYS-NSFSTHDRNTMDALPACMLRDVTQESLGVA------VIGIDEGQFFPD 104
Query: 63 LYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFT 122
+ DFC A+ +GKTV+VA LDG + R+ FGS+L+++PLA+SV KLTA C C + A +T
Sbjct: 105 IVDFCEMMAN-EGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYT 163
Query: 123 LRKTQETQVELIGGVDVYMPVCRQHY 148
R E +VE+IGG D Y VCR Y
Sbjct: 164 KRLGLEKEVEVIGGADKYHSVCRLCY 189
>gb|AAA40452.1| cytosolic thymidine kinase
Length = 206
Score = 117 bits (293), Expect = 1e-25
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 9/146 (6%)
Query: 4 IIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKF-GVDAYEQLDVIGIDEAQFFDD 62
+IK +KDTRY +S THD + L Q+ GV VIGIDE QFF D
Sbjct: 25 VIKYAKDTRYS-NSFSTHDRNTMDALPACMLRDVTQELLGVA------VIGIDEGQFFPD 77
Query: 63 LYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFT 122
+ DFC A+ +GKTV+VA LDG + R+ FGS+L+++PLA+SV KLTA C C + A +T
Sbjct: 78 IVDFCEMMAN-EGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYT 136
Query: 123 LRKTQETQVELIGGVDVYMPVCRQHY 148
R E +VE+IGG D Y VCR Y
Sbjct: 137 KRLGLEKEVEVIGGADKYHSVCRLCY 162
>gb|AAM92382.1| EVM078 [Ectromelia virus] gi|22164683|ref|NP_671596.1| EVM078
[Ectromelia virus]
Length = 177
Score = 116 bits (290), Expect = 3e-25
Identities = 63/146 (43%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Query: 5 IKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFFDDLY 64
IK S D RYG + THD L +DA VIGIDE QFF D+
Sbjct: 38 IKYSNDNRYGT-GLWTHDKNNFEALEATKLCDV-----MDAVTDFSVIGIDEGQFFPDIV 91
Query: 65 DFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFTLR 124
+FC A+ +GK V+VA LDG + R+ F ++LD+IPL++ V KLTA C C K A F+ R
Sbjct: 92 EFCERMAN-EGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKR 150
Query: 125 KTQETQVELIGGVDVYMPVCRQHYVN 150
ET++E+IGG D+Y +CR+ Y++
Sbjct: 151 LGTETEIEIIGGNDMYQSMCRKCYID 176
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 273,056,504
Number of Sequences: 2540612
Number of extensions: 10686210
Number of successful extensions: 22427
Number of sequences better than 10.0: 246
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 22043
Number of HSP's gapped (non-prelim): 251
length of query: 172
length of database: 863,360,394
effective HSP length: 119
effective length of query: 53
effective length of database: 561,027,566
effective search space: 29734460998
effective search space used: 29734460998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0367.7