BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0358.18
(152 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB49378.1| A20 159 2e-38
emb|CAB81282.1| L1 specific homeobox gene ATML1/ovule-specific h... 159 2e-38
gb|AAN12908.1| putative L1-specific homeobox gene ATML1/ovule-sp... 159 2e-38
emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]... 150 6e-36
gb|AAN15463.1| Unknown protein [Arabidopsis thaliana] gi|1427606... 150 6e-36
gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF... 150 6e-36
gb|AAB37230.1| homeobox protein gi|2147484|pir||S71477 homeotic ... 142 2e-33
gb|AAG43405.1| homeobox 1 [Picea abies] 139 1e-32
gb|AAM10289.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana] gi|15... 135 2e-31
gb|AAB71455.1| Strong similarity to Phalaenopsis homeobox protei... 135 2e-31
ref|XP_473974.1| OSJNBb0060E08.16 [Oryza sativa (japonica cultiv... 129 2e-29
dbj|BAB85750.1| Roc1 [Oryza sativa] 128 2e-29
dbj|BAC77155.1| GL2-type homeodomain protein [Oryza sativa (japo... 127 7e-29
ref|XP_480435.1| roc1(homeobox protein) [Oryza sativa (japonica ... 126 9e-29
ref|XP_479975.1| putative OCL5 protein [Oryza sativa (japonica c... 123 1e-27
emb|CAB96425.1| OCL5 protein [Zea mays] 117 4e-26
gb|AAL73523.1| OCL5 protein [Sorghum bicolor] 112 2e-24
emb|CAD41424.2| OSJNBb0032E06.7 [Oryza sativa (japonica cultivar... 94 9e-19
dbj|BAC77157.1| GL2-type homeodomain protein [Oryza sativa (japo... 94 9e-19
gb|AAU12247.1| homeodomain protein HOX3 [Gossypium hirsutum] 93 1e-18
>gb|AAB49378.1| A20
Length = 718
Score = 159 bits (401), Expect = 2e-38
Identities = 90/166 (54%), Positives = 112/166 (67%), Gaps = 18/166 (10%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
ATC CGG ++GEMS+DEQ +++ENARLRE I+RIS I AKY GK + SS Q +
Sbjct: 106 ATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLMANSSSFPQLSS 165
Query: 61 QMPSSSRAFDLGVGNYGGDGN-------------DLLRS-SLPPILADADKPIIVEVAVA 106
SR+ DL VGN+G + N D+LRS S+P ++ADKP+IVE+AVA
Sbjct: 166 SHHIPSRSLDLEVGNFGNNNNSHTGFVGEMFGSSDILRSVSIP---SEADKPMIVELAVA 222
Query: 107 AMEELVRLARVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
AMEELVR+A+ G PLWV S+N +VE LNEEEY R FPRG G KP G
Sbjct: 223 AMEELVRMAQTGDPLWVSSDN-SVEILNEEEYFRTFPRGIGPKPIG 267
>emb|CAB81282.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
[Arabidopsis thaliana] gi|4455283|emb|CAB36819.1| L1
specific homeobox gene ATML1/ovule-specific homeobox
protein A20 [Arabidopsis thaliana]
gi|7446299|pir||T05850 homeobox protein ATML1,
L1-specific - Arabidopsis thaliana
Length = 718
Score = 159 bits (401), Expect = 2e-38
Identities = 90/166 (54%), Positives = 112/166 (67%), Gaps = 18/166 (10%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
ATC CGG ++GEMS+DEQ +++ENARLRE I+RIS I AKY GK + SS Q +
Sbjct: 106 ATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLMANSSSFPQLSS 165
Query: 61 QMPSSSRAFDLGVGNYGGDGN-------------DLLRS-SLPPILADADKPIIVEVAVA 106
SR+ DL VGN+G + N D+LRS S+P ++ADKP+IVE+AVA
Sbjct: 166 SHHIPSRSLDLEVGNFGNNNNSHTGFVGEMFGSSDILRSVSIP---SEADKPMIVELAVA 222
Query: 107 AMEELVRLARVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
AMEELVR+A+ G PLWV S+N +VE LNEEEY R FPRG G KP G
Sbjct: 223 AMEELVRMAQTGDPLWVSSDN-SVEILNEEEYFRTFPRGIGPKPIG 267
>gb|AAN12908.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
protein A20 [Arabidopsis thaliana]
gi|20268701|gb|AAM14054.1| putative L1-specific homeobox
gene ATML1/ovule-specific homeobox protein A20
[Arabidopsis thaliana] gi|22328861|ref|NP_193906.2| L1
specific homeobox gene (ML1) / ovule-specific homeobox
protein A20 [Arabidopsis thaliana]
Length = 762
Score = 159 bits (401), Expect = 2e-38
Identities = 90/166 (54%), Positives = 112/166 (67%), Gaps = 18/166 (10%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
ATC CGG ++GEMS+DEQ +++ENARLRE I+RIS I AKY GK + SS Q +
Sbjct: 150 ATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLMANSSSFPQLSS 209
Query: 61 QMPSSSRAFDLGVGNYGGDGN-------------DLLRS-SLPPILADADKPIIVEVAVA 106
SR+ DL VGN+G + N D+LRS S+P ++ADKP+IVE+AVA
Sbjct: 210 SHHIPSRSLDLEVGNFGNNNNSHTGFVGEMFGSSDILRSVSIP---SEADKPMIVELAVA 266
Query: 107 AMEELVRLARVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
AMEELVR+A+ G PLWV S+N +VE LNEEEY R FPRG G KP G
Sbjct: 267 AMEELVRMAQTGDPLWVSSDN-SVEILNEEEYFRTFPRGIGPKPIG 311
>emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]
gi|25386232|pir||E85061 probable homeotic protein
[imported] - Arabidopsis thaliana
Length = 738
Score = 150 bits (379), Expect = 6e-36
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 19/162 (11%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
ATC CGG ++GEMS+DEQ +++ENARLRE I+RIS I AKY GK S + L+
Sbjct: 145 ATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLGSSFAPLA---- 200
Query: 61 QMPSSSRAFDLGVGNYG----------GDGNDLLRSSLPPILADADKPIIVEVAVAAMEE 110
+ + SR+ DL VGN+G G G+ L S+P ++ DKPIIVE+AVAAMEE
Sbjct: 201 -IHAPSRSLDLEVGNFGNQTGFVGEMYGTGDILRSVSIP---SETDKPIIVELAVAAMEE 256
Query: 111 LVRLARVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
LVR+A+ G PLW LS +++VE LNEEEY R FPRG G KP G
Sbjct: 257 LVRMAQTGDPLW-LSTDNSVEILNEEEYFRTFPRGIGPKPLG 297
>gb|AAN15463.1| Unknown protein [Arabidopsis thaliana] gi|14276060|dbj|BAB58961.1|
protodermal factor2 [Arabidopsis thaliana]
gi|17064998|gb|AAL32653.1| Unknown protein [Arabidopsis
thaliana] gi|15983372|gb|AAL11554.1| AT4g04890/T1J1_3
[Arabidopsis thaliana] gi|18412734|ref|NP_567274.1|
homeobox-leucine zipper protein protodermal factor 2
(PDF2) [Arabidopsis thaliana]
Length = 743
Score = 150 bits (379), Expect = 6e-36
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 19/162 (11%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
ATC CGG ++GEMS+DEQ +++ENARLRE I+RIS I AKY GK S + L+
Sbjct: 150 ATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLGSSFAPLA---- 205
Query: 61 QMPSSSRAFDLGVGNYG----------GDGNDLLRSSLPPILADADKPIIVEVAVAAMEE 110
+ + SR+ DL VGN+G G G+ L S+P ++ DKPIIVE+AVAAMEE
Sbjct: 206 -IHAPSRSLDLEVGNFGNQTGFVGEMYGTGDILRSVSIP---SETDKPIIVELAVAAMEE 261
Query: 111 LVRLARVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
LVR+A+ G PLW LS +++VE LNEEEY R FPRG G KP G
Sbjct: 262 LVRMAQTGDPLW-LSTDNSVEILNEEEYFRTFPRGIGPKPLG 302
>gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF00046, Score,36.5,
E=6.9e-08, N=1) [Arabidopsis thaliana]
Length = 772
Score = 150 bits (379), Expect = 6e-36
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 19/162 (11%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
ATC CGG ++GEMS+DEQ +++ENARLRE I+RIS I AKY GK S + L+
Sbjct: 160 ATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLGSSFAPLA---- 215
Query: 61 QMPSSSRAFDLGVGNYG----------GDGNDLLRSSLPPILADADKPIIVEVAVAAMEE 110
+ + SR+ DL VGN+G G G+ L S+P ++ DKPIIVE+AVAAMEE
Sbjct: 216 -IHAPSRSLDLEVGNFGNQTGFVGEMYGTGDILRSVSIP---SETDKPIIVELAVAAMEE 271
Query: 111 LVRLARVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
LVR+A+ G PLW LS +++VE LNEEEY R FPRG G KP G
Sbjct: 272 LVRMAQTGDPLW-LSTDNSVEILNEEEYFRTFPRGIGPKPLG 312
>gb|AAB37230.1| homeobox protein gi|2147484|pir||S71477 homeotic protein,
ovule-specific - Phalaenopsis sp
Length = 768
Score = 142 bits (358), Expect = 2e-33
Identities = 86/164 (52%), Positives = 108/164 (65%), Gaps = 19/164 (11%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C CGG +LGEMS+DE +++ENARLRE I+RISGI AKY GK SY LLS
Sbjct: 177 ASCPNCGGPATLGEMSFDEHHLRIENARLREEIDRISGIAAKYVGKPMNSY-PLLSPT-- 233
Query: 61 QMPSSSRAFDLGVGNY-------GGD---GNDLLRSSLPPILADADKPIIVEVAVAAMEE 110
+PS S + DLGVG + GGD +LLRS + DKP+++E+AVAAMEE
Sbjct: 234 -LPSRS-SLDLGVGGFGLHSPTMGGDMFSPAELLRSVAGQ--PEVDKPMVIELAVAAMEE 289
Query: 111 LVRLARVGHPLWVLSN--NHNVETLNEEEYVREFPRGTGSKPFG 152
L+R+A++G PLW S + E LNEEEYV+ FPRG G KPFG
Sbjct: 290 LIRMAQLGEPLWTSSPGLDGGNEILNEEEYVQNFPRGIGPKPFG 333
>gb|AAG43405.1| homeobox 1 [Picea abies]
Length = 763
Score = 139 bits (350), Expect = 1e-32
Identities = 76/163 (46%), Positives = 104/163 (63%), Gaps = 16/163 (9%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C CGG +LGEMS+DEQ +++ENARLRE I+RISGI AKY GK S+ +
Sbjct: 172 ASCPNCGGPAALGEMSFDEQQLRMENARLREEIDRISGIAAKYVGKPLLSFGP---SPLS 228
Query: 61 QMPSSSRAFDLGVGNYGGDGN---DLLRSSLPPILA--------DADKPIIVEVAVAAME 109
+P S+ DL VG+YG N D+ SS + + +KP++VE+AVAAME
Sbjct: 229 SIPRSN--LDLAVGSYGVQPNIGPDIYGSSSGGEIGNRSLVGPTEGEKPMVVELAVAAME 286
Query: 110 ELVRLARVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
ELVR+A++G PLW + + LNE+EY+R FPRG G +P+G
Sbjct: 287 ELVRMAQLGEPLWTSHPEDSTDILNEDEYIRTFPRGIGPRPYG 329
>gb|AAM10289.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
gi|15220448|ref|NP_172015.1| homeobox-leucine zipper
family protein / lipid-binding START domain-containing
protein [Arabidopsis thaliana]
gi|30679181|ref|NP_849596.1| homeobox-leucine zipper
family protein / lipid-binding START domain-containing
protein [Arabidopsis thaliana]
gi|14334996|gb|AAK59762.1| At1g05230/YUP8H12_16
[Arabidopsis thaliana]
Length = 721
Score = 135 bits (340), Expect = 2e-31
Identities = 73/157 (46%), Positives = 100/157 (63%), Gaps = 18/157 (11%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C CGG T++GEMS+DE ++LENARLRE I+RIS I AKY GK ++Y + +
Sbjct: 152 ASCPNCGGPTAIGEMSFDEHQLRLENARLREEIDRISAIAAKYVGKPVSNYPLM-----S 206
Query: 61 QMPSSSRAFDLGVGNYGGDG-----NDLLRSSLPPILADADKPIIVEVAVAAMEELVRLA 115
P R +L +GN GG+ NDLL+S P ++DKP+I++++VAAMEEL+R+
Sbjct: 207 PPPLPPRPLELAMGNIGGEAYGNNPNDLLKSITAP--TESDKPVIIDLSVAAMEELMRMV 264
Query: 116 RVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
+V PLW L+EEEY R FPRG G +P G
Sbjct: 265 QVDEPLW------KSLVLDEEEYARTFPRGIGPRPAG 295
>gb|AAB71455.1| Strong similarity to Phalaenopsis homeobox protein (gb|U34743).
[Arabidopsis thaliana] gi|25386235|pir||G86186
hypothetical protein [imported] - Arabidopsis thaliana
Length = 749
Score = 135 bits (340), Expect = 2e-31
Identities = 73/157 (46%), Positives = 100/157 (63%), Gaps = 18/157 (11%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C CGG T++GEMS+DE ++LENARLRE I+RIS I AKY GK ++Y + +
Sbjct: 168 ASCPNCGGPTAIGEMSFDEHQLRLENARLREEIDRISAIAAKYVGKPVSNYPLM-----S 222
Query: 61 QMPSSSRAFDLGVGNYGGDG-----NDLLRSSLPPILADADKPIIVEVAVAAMEELVRLA 115
P R +L +GN GG+ NDLL+S P ++DKP+I++++VAAMEEL+R+
Sbjct: 223 PPPLPPRPLELAMGNIGGEAYGNNPNDLLKSITAP--TESDKPVIIDLSVAAMEELMRMV 280
Query: 116 RVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
+V PLW L+EEEY R FPRG G +P G
Sbjct: 281 QVDEPLW------KSLVLDEEEYARTFPRGIGPRPAG 311
>ref|XP_473974.1| OSJNBb0060E08.16 [Oryza sativa (japonica cultivar-group)]
gi|39545845|emb|CAE04753.3| OSJNBb0060E08.16 [Oryza
sativa (japonica cultivar-group)]
Length = 781
Score = 129 bits (323), Expect = 2e-29
Identities = 76/165 (46%), Positives = 99/165 (59%), Gaps = 19/165 (11%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C CGG +LGEMS+DE +++ENARLRE I+RIS I AKY GK + L N
Sbjct: 189 ASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMVPFPVL--SNPM 246
Query: 61 QMPSSSRAFDLGVGNY--------GGDGNDLLRSSLPPILADADKPIIVEVAVAAMEELV 112
+S DL V Y GG +LLR + ++ DKP+IVE+AVAAMEELV
Sbjct: 247 AAAASRAPLDLPVAPYGVPGDMFGGGGAGELLRG----VQSEVDKPMIVELAVAAMEELV 302
Query: 113 RLARVGHPLWVL-----SNNHNVETLNEEEYVREFPRGTGSKPFG 152
R+A++ PLW + + +ETL+EEEY R FPRG G K +G
Sbjct: 303 RMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYG 347
>dbj|BAB85750.1| Roc1 [Oryza sativa]
Length = 784
Score = 128 bits (322), Expect = 2e-29
Identities = 76/161 (47%), Positives = 101/161 (62%), Gaps = 14/161 (8%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C CGG +LGEMS+DE +++ENARLR+ I+RISGI AK+ GK S+LS
Sbjct: 194 ASCPNCGGPAALGEMSFDEHHLRVENARLRDEIDRISGIAAKHVGKPPIVSFSVLSSPL- 252
Query: 61 QMPSSSRAFDL---------GVGNYGGDGNDLLRSSLPPILADADKPIIVEVAVAAMEEL 111
+ ++ DL G+ +GG G DLLR P DADKP+IVE+AVAAM+EL
Sbjct: 253 AVAAARSPLDLAGAYGVVTPGLDMFGGAG-DLLRGVHP---LDADKPMIVELAVAAMDEL 308
Query: 112 VRLARVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
V++A++ PLW S+ L+EEEY R FPRG G K +G
Sbjct: 309 VQMAQLDEPLWSSSSEPAAALLDEEEYARMFPRGLGPKQYG 349
>dbj|BAC77155.1| GL2-type homeodomain protein [Oryza sativa (japonica
cultivar-group)]
Length = 783
Score = 127 bits (318), Expect = 7e-29
Identities = 75/165 (45%), Positives = 98/165 (58%), Gaps = 19/165 (11%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C CGG +LGEMS+DE +++ENARLRE I+RIS I AKY GK + L N
Sbjct: 191 ASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMVPFPVL--SNPM 248
Query: 61 QMPSSSRAFDLGVGNY--------GGDGNDLLRSSLPPILADADKPIIVEVAVAAMEELV 112
+S DL V Y GG +LLR + ++ DKP+IVE+AV AMEELV
Sbjct: 249 AAAASRAPLDLPVAPYGVPGDMFGGGGAGELLRG----VQSEVDKPMIVELAVPAMEELV 304
Query: 113 RLARVGHPLWVL-----SNNHNVETLNEEEYVREFPRGTGSKPFG 152
R+A++ PLW + + +ETL+EEEY R FPRG G K +G
Sbjct: 305 RMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYG 349
>ref|XP_480435.1| roc1(homeobox protein) [Oryza sativa (japonica cultivar-group)]
gi|38637066|dbj|BAD03323.1| roc1(homeobox protein)
[Oryza sativa (japonica cultivar-group)]
gi|38636931|dbj|BAD03194.1| roc1(homeobox protein)
[Oryza sativa (japonica cultivar-group)]
Length = 784
Score = 126 bits (317), Expect = 9e-29
Identities = 75/161 (46%), Positives = 100/161 (61%), Gaps = 14/161 (8%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C CGG +LGEMS+DE +++ENARLR+ I+RISGI AK+ GK +LS
Sbjct: 194 ASCPNCGGPAALGEMSFDEHHLRVENARLRDEIDRISGIAAKHVGKPPIVSFPVLSSPL- 252
Query: 61 QMPSSSRAFDL---------GVGNYGGDGNDLLRSSLPPILADADKPIIVEVAVAAMEEL 111
+ ++ DL G+ +GG G DLLR P DADKP+IVE+AVAAM+EL
Sbjct: 253 AVAAARSPLDLAGAYGVVTPGLDMFGGAG-DLLRGVHP---LDADKPMIVELAVAAMDEL 308
Query: 112 VRLARVGHPLWVLSNNHNVETLNEEEYVREFPRGTGSKPFG 152
V++A++ PLW S+ L+EEEY R FPRG G K +G
Sbjct: 309 VQMAQLDEPLWSSSSEPAAALLDEEEYARMFPRGLGPKQYG 349
>ref|XP_479975.1| putative OCL5 protein [Oryza sativa (japonica cultivar-group)]
gi|38636822|dbj|BAD03062.1| putative OCL5 protein [Oryza
sativa (japonica cultivar-group)]
gi|46390804|dbj|BAD16310.1| putative OCL5 protein [Oryza
sativa (japonica cultivar-group)]
Length = 828
Score = 123 bits (308), Expect = 1e-27
Identities = 71/149 (47%), Positives = 93/149 (61%), Gaps = 14/149 (9%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C CGG ++GEMS+DE ++LENARLR+ I+RIS I AKY GK + S+ Y
Sbjct: 255 ASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGKPAAAVSAA----YP 310
Query: 61 QMPSSSRAFDLGVGNYGGDGNDLLRSSLPPILADADKPIIVEVAVAAMEELVRLARVGHP 120
+P S+R+ L G G D+ AD DKP+++E+AVAAMEELVR+A++G P
Sbjct: 311 PLPPSNRS-PLDHMGIPGAGADVFG-------ADFDKPLVIELAVAAMEELVRMAQLGEP 362
Query: 121 LWVLSNNHNVETLNEEEYVREFPRGTGSK 149
LW + E L EEEY R FPRG G K
Sbjct: 363 LWAPALGG--EALGEEEYARTFPRGLGPK 389
>emb|CAB96425.1| OCL5 protein [Zea mays]
Length = 795
Score = 117 bits (294), Expect = 4e-26
Identities = 76/168 (45%), Positives = 102/168 (60%), Gaps = 17/168 (10%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A+C +CGG +LGEMS+DE ++LENARLR+ I+RISGI AK+ GK S+ L S
Sbjct: 192 ASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPMVSFPVLSSPLAA 251
Query: 61 QMPSSSRA-FDL-----------GVGN---YGGDGNDLLRSSLPPILADADKPIIVEVAV 105
+++R+ DL G+G +G DLLRS L DADKP+IVE+AV
Sbjct: 252 AAAAAARSPLDLAGAYGVQSAAAGLGADHLFGAGAGDLLRSVSAGQL-DADKPMIVELAV 310
Query: 106 AAMEELVRLARVGHPLWVLSNNHNV-ETLNEEEYVREFPRGTGSKPFG 152
AAM+EL+R+AR LW + + L+EEEYVR FP G G + +G
Sbjct: 311 AAMDELLRMARPDALLWGGGASAGAQQQLDEEEYVRTFPAGLGPRQYG 358
>gb|AAL73523.1| OCL5 protein [Sorghum bicolor]
Length = 803
Score = 112 bits (279), Expect = 2e-24
Identities = 70/163 (42%), Positives = 94/163 (56%), Gaps = 21/163 (12%)
Query: 1 ATCTTCGGLTS--LGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTS----YSSL 54
A+C CGG + +GEMS+DE +++ENARLR+ ++RIS I AKY GK S S++
Sbjct: 187 ASCPNCGGPATAVIGEMSFDEHHLRIENARLRDEVDRISTIAAKYVGKPAGSLLPNLSNI 246
Query: 55 LSQNYNQMP-----SSSRAFDLGVGNYGGDGNDLLRSSLPPILADADKPIIVEVAVAAME 109
S + P SS G +GG L A DK ++VE+AVAAME
Sbjct: 247 SSASMAPYPPPPPLSSHHLLPGGTDMFGG-------LHLHGAAAGFDKGLVVELAVAAME 299
Query: 110 ELVRLARVGHPLWV---LSNNHNVETLNEEEYVREFPRGTGSK 149
ELVR+A++G PLW+ + + +ETLNEEEY R FP G G K
Sbjct: 300 ELVRMAQLGEPLWIPALVVDGATIETLNEEEYARGFPSGVGPK 342
>emb|CAD41424.2| OSJNBb0032E06.7 [Oryza sativa (japonica cultivar-group)]
gi|50928031|ref|XP_473543.1| OSJNBb0032E06.7 [Oryza
sativa (japonica cultivar-group)]
Length = 806
Score = 93.6 bits (231), Expect = 9e-19
Identities = 59/180 (32%), Positives = 94/180 (51%), Gaps = 30/180 (16%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A C CGG LGE+S +E +++ENARL++ + R+ + AK+ GKS + + +
Sbjct: 192 AVCVGCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPH 251
Query: 61 QMPSSSRAFDLGVGNYGG------------DGNDLLRSSL------------PPILADAD 96
+P SS +L VG G D + SS+ P +A D
Sbjct: 252 PVPGSS--LELAVGGIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAMAGID 309
Query: 97 KPIIVEVAVAAMEELVRLARVGHPLWV----LSNNHNVETLNEEEYVREFPRGTGSKPFG 152
K + +E+A++AM+ELV++A++G PLW+ + ++ E+LN EEY+ FP G KP G
Sbjct: 310 KSLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEG 369
>dbj|BAC77157.1| GL2-type homeodomain protein [Oryza sativa (japonica
cultivar-group)]
Length = 813
Score = 93.6 bits (231), Expect = 9e-19
Identities = 59/180 (32%), Positives = 94/180 (51%), Gaps = 30/180 (16%)
Query: 1 ATCTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYN 60
A C CGG LGE+S +E +++ENARL++ + R+ + AK+ GKS + + +
Sbjct: 192 AVCVGCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPH 251
Query: 61 QMPSSSRAFDLGVGNYGG------------DGNDLLRSSL------------PPILADAD 96
+P SS +L VG G D + SS+ P +A D
Sbjct: 252 PVPGSS--LELAVGGIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAMAGID 309
Query: 97 KPIIVEVAVAAMEELVRLARVGHPLWV----LSNNHNVETLNEEEYVREFPRGTGSKPFG 152
K + +E+A++AM+ELV++A++G PLW+ + ++ E+LN EEY+ FP G KP G
Sbjct: 310 KSLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEG 369
>gb|AAU12247.1| homeodomain protein HOX3 [Gossypium hirsutum]
Length = 713
Score = 93.2 bits (230), Expect = 1e-18
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query: 3 CTTCGGLTSLGEMSYDEQLMKLENARLREAIERISGIVAKYAGKSTTSYSSLLSQNYNQM 62
C +CGG + + +D+Q M++ENA+L+E ++R+S I AKY G+ + + + + +
Sbjct: 117 CPSCGGPPANEDSYFDDQKMRMENAQLKEELDRVSSIAAKYIGRPISQLPPVQPVHISSL 176
Query: 63 PSSSRAFD-LGVGNYGGDGNDLLRSSL---------PPILADADKPIIVEVAVAAMEELV 112
+FD GVG DLL S P +++D DK ++ ++A AMEEL+
Sbjct: 177 DFRMASFDGYGVGAGPSLDLDLLPGSSSSMPNLPFQPVVISDIDKSLMSDIAANAMEELL 236
Query: 113 RLARVGHPLWVLSNNHNVETLNEEEYVREFPR 144
RL + PLW+ S N + LN E Y R FP+
Sbjct: 237 RLLQTNEPLWIKSTNDGKDALNLESYERIFPK 268
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 257,256,223
Number of Sequences: 2540612
Number of extensions: 9518253
Number of successful extensions: 20889
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 20723
Number of HSP's gapped (non-prelim): 112
length of query: 152
length of database: 863,360,394
effective HSP length: 128
effective length of query: 24
effective length of database: 538,162,058
effective search space: 12915889392
effective search space used: 12915889392
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0358.18