BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0349b.2
(400 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_671823.1| expressed protein [Arabidopsis thaliana] 176 9e-43
ref|NP_915242.1| P0703B11.15 [Oryza sativa (japonica cultivar-gr... 157 4e-37
gb|AAP54021.1| contains similarity to ribosomal protein [Oryza s... 154 4e-36
ref|NP_918048.1| B1074C08.24 [Oryza sativa (japonica cultivar-gr... 154 4e-36
gb|AAP55032.1| hypothetical protein [Oryza sativa (japonica cult... 154 5e-36
gb|AAY33663.1| unknown [Brassica juncea] 153 8e-36
gi|27575890 TPA: putative transposase [Oryza sativa (japonica cu... 152 1e-35
gb|AAV44104.1| hypothetical protein [Oryza sativa (japonica cult... 152 2e-35
gb|AAX94933.1| transposon protein, putative, ping/pong/SNOOPY su... 150 5e-35
gi|27575887 TPA: putative transposase [Oryza sativa (japonica cu... 150 5e-35
gb|AAX96772.1| transposon protein, putative, ping/pong/SNOOPY su... 147 4e-34
gb|AAX96665.1| transposon protein, putative, ping/pong/SNOOPY su... 147 4e-34
emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa (japonica cultiva... 144 4e-33
gb|AAX96400.1| transposon protein, putative, ping/pong/SNOOPY su... 143 8e-33
ref|XP_470831.1| hypothetical protein [Oryza sativa (japonica cu... 142 2e-32
gb|AAL79730.1| putative ribosomal protein [Oryza sativa] 142 2e-32
ref|XP_471573.1| OSJNBb0032D24.14 [Oryza sativa (japonica cultiv... 138 3e-31
dbj|BAD36605.1| ribosomal protein-like [Oryza sativa (japonica c... 135 2e-30
ref|XP_475696.1| hypothetical protein [Oryza sativa (japonica cu... 133 8e-30
gb|AAM45005.1| unknown protein [Arabidopsis thaliana] gi|1529288... 129 2e-28
>ref|NP_671823.1| expressed protein [Arabidopsis thaliana]
Length = 270
Score = 176 bits (447), Expect = 9e-43
Identities = 103/185 (55%), Positives = 113/185 (60%), Gaps = 51/185 (27%)
Query: 6 MDPPE--FDLEAYLEKSEREDTYILNRFRDRRNLILEDSAPRGRKHLSRDHAGANQRLID 63
MDP E FD++AY +SE E+ YI+NRFR+RRN I ED P
Sbjct: 1 MDPSEYPFDIKAYKRQSEIEEMYIINRFRERRNKIGEDYPPH------------------ 42
Query: 64 DYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRVDAAKKEGISPLAKCTTT 123
LS+SDNYFTQR DAAKKEGISPL K TTT
Sbjct: 43 -------------------------------LSNSDNYFTQRYDAAKKEGISPLPKYTTT 71
Query: 124 MRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEYLRAPTQEDLQRILHVNE 183
MRM A GVAADAVDEY KIG TTTLECLRRFCKGII+LYE EYLRAPTQ+DLQRIL V+E
Sbjct: 72 MRMFAYGVAADAVDEYSKIGGTTTLECLRRFCKGIIKLYETEYLRAPTQDDLQRILRVSE 131
Query: 184 MWGVP 188
M G P
Sbjct: 132 MRGFP 136
>ref|NP_915242.1| P0703B11.15 [Oryza sativa (japonica cultivar-group)]
Length = 401
Score = 157 bits (398), Expect = 4e-37
Identities = 72/142 (50%), Positives = 98/142 (68%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
RK+++R+H GA+ +L DYF +P Y FRRR+RM++HVFL IV +L +YFT RV
Sbjct: 54 RKYINRNHEGAHDQLFADYFAEDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRV 113
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
D + G SPL KCT +RMLA G AADA+DEY+K+ ++T LECL F +G++ ++ Y
Sbjct: 114 DCTGRLGHSPLQKCTAAIRMLAYGTAADALDEYLKVPQSTALECLENFVEGVVEVFSSRY 173
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LR PT EDL+R+L V E G P
Sbjct: 174 LRRPTAEDLERLLQVGESRGFP 195
>gb|AAP54021.1| contains similarity to ribosomal protein [Oryza sativa (japonica
cultivar-group)] gi|37534864|ref|NP_921734.1| contains
similarity to ribosomal protein [Oryza sativa (japonica
cultivar-group)]
Length = 308
Score = 154 bits (390), Expect = 4e-36
Identities = 69/143 (48%), Positives = 98/143 (68%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
RK+++R+H GA+ +L DYF +P Y FRRR+RM++HVFL IV +L +YFT R+
Sbjct: 54 RKYINRNHEGAHDQLFADYFAKDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRI 113
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
+ + G SPL KCT +RMLA G AAD +DEY+K+ ++T LECL F +G++ ++ Y
Sbjct: 114 NCTGRLGHSPLQKCTAAIRMLAYGTAADTLDEYLKVPQSTALECLENFVEGVVEVFSSRY 173
Query: 167 LRAPTQEDLQRILHVNEMWGVPK 189
LR PT EDL+R+L V E G P+
Sbjct: 174 LRRPTAEDLERLLQVGESRGFPR 196
>ref|NP_918048.1| B1074C08.24 [Oryza sativa (japonica cultivar-group)]
Length = 408
Score = 154 bits (390), Expect = 4e-36
Identities = 74/142 (52%), Positives = 101/142 (71%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
RK + DH A+ LI DYF +P Y + +FR R+RM + +FLRIV+ L YFT +V
Sbjct: 52 RKTIKTDHTVAHHCLIADYFSEDPLYPESMFRTRFRMGRPLFLRIVSALGRWSPYFTLKV 111
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
D + ++G+SPL KCTTTMRMLA G AD++DEY+KIG++T+L+CL F +G+I ++ EY
Sbjct: 112 DCSGRQGLSPLQKCTTTMRMLAYGSPADSLDEYLKIGKSTSLQCLDMFARGVIEVFGSEY 171
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LR PT ED++RIL VNE G P
Sbjct: 172 LRRPTYEDVERILQVNESRGFP 193
>gb|AAP55032.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37536886|ref|NP_922745.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|12597879|gb|AAG60187.1| hypothetical protein [Oryza
sativa]
Length = 513
Score = 154 bits (389), Expect = 5e-36
Identities = 71/142 (50%), Positives = 96/142 (67%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
RK+++R+H GA+ +L DYF +P Y FRRR+RM++HVFL IV +L +YFT RV
Sbjct: 54 RKYINRNHEGAHDQLFADYFAEDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRV 113
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
D G SPL KCT +RMLA G AAD +DEY+K+ ++T LECL F +G++ ++ Y
Sbjct: 114 DCTGCLGHSPLQKCTAAIRMLAYGTAADTLDEYLKVPQSTALECLENFVEGVVEVFSSRY 173
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LR PT EDL+R+L V E G P
Sbjct: 174 LRRPTAEDLERLLQVGESRGFP 195
>gb|AAY33663.1| unknown [Brassica juncea]
Length = 136
Score = 153 bits (387), Expect = 8e-36
Identities = 79/122 (64%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
Query: 6 MDPPEFD--LEAYLEKSEREDTYILNRFRDRRNLILED-SAPRGRKHLSRDHAGANQRLI 62
MDP EFD +EAY +SE ++ YILN F +RR I +D S+ + R++ RDHA ANQRLI
Sbjct: 15 MDPLEFDFDIEAYKRQSEIKERYILNHFSERRQKIEQDYSSSKKRRYFKRDHAAANQRLI 74
Query: 63 DDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRVDAAKKEGISPLAKCTT 122
DDYF N+PTYDD +FRRR+RM+KHVFL IV +LS SD+YFTQR DAA KEGISPLAK TT
Sbjct: 75 DDYFSNQPTYDDAMFRRRFRMRKHVFLWIVGNLSISDDYFTQRFDAANKEGISPLAKYTT 134
Query: 123 TM 124
M
Sbjct: 135 AM 136
>gi|27575890 TPA: putative transposase [Oryza sativa (japonica cultivar-group)]
gi|22830897|dbj|BAC15771.1| B [Oryza sativa (japonica
cultivar-group)]
Length = 455
Score = 152 bits (385), Expect = 1e-35
Identities = 72/142 (50%), Positives = 96/142 (66%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
RKH+ R A+Q L++DYF P Y IFRRR+RM + +FLRIV L +YFTQRV
Sbjct: 57 RKHIKRPREEAHQNLVNDYFSENPLYPSNIFRRRFRMYRPLFLRIVDALGQWSDYFTQRV 116
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
DAA ++G+SPL KCT +R LA G AD +DEY+KIGETT ++ ++ F KGI ++ + Y
Sbjct: 117 DAAGRQGLSPLQKCTAAIRQLATGSGADELDEYLKIGETTAMDAMKNFVKGIREVFGERY 176
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LR PT ED +R+L + E G P
Sbjct: 177 LRRPTVEDTERLLELGERRGFP 198
>gb|AAV44104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|55167955|gb|AAV43824.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 444
Score = 152 bits (384), Expect = 2e-35
Identities = 74/141 (52%), Positives = 95/141 (66%)
Query: 48 KHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRVD 107
K + RDH A+ RL+ DYF P Y + +FR R+RM K +FLRIV LS YFTQR D
Sbjct: 59 KTIRRDHVDAHSRLVADYFAEHPLYPERMFRTRFRMHKPLFLRIVEALSQWSPYFTQRGD 118
Query: 108 AAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEYL 167
+ +SPL KCT +RMLA G ADA+DEY+KIG++T LECL F +G+I ++ YL
Sbjct: 119 CSGHTSLSPLQKCTAALRMLAYGTPADALDEYLKIGKSTALECLEMFSRGVIVVFGGTYL 178
Query: 168 RAPTQEDLQRILHVNEMWGVP 188
R PT+ED++ ILHVNE G P
Sbjct: 179 RRPTREDVEHILHVNESRGFP 199
>gb|AAX94933.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
gi|50252817|dbj|BAD29050.1| ribosomal protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 447
Score = 150 bits (380), Expect = 5e-35
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
RKH+ R A+Q+L++DYF P Y IFRRR+RM + +FLRIV L YFTQRV
Sbjct: 56 RKHIKRPREEAHQQLVNDYFSENPLYPSKIFRRRFRMSRPLFLRIVEALGQWSVYFTQRV 115
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
DA ++G+SPL KCT +R LA G AD +DEY+KIGETT +E ++ F KG+ ++ + Y
Sbjct: 116 DAVNRKGLSPLQKCTAAIRQLATGSGADELDEYLKIGETTAMEAMKNFVKGLQDVFGERY 175
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LR PT ED +R+L + E G P
Sbjct: 176 LRRPTMEDTERLLQLGEKRGFP 197
>gi|27575887 TPA: putative transposase [Oryza sativa (japonica cultivar-group)]
Length = 482
Score = 150 bits (380), Expect = 5e-35
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
RKH+ R A+Q+L++DYF P Y IFRRR+RM + +FLRIV L YFTQRV
Sbjct: 91 RKHIKRPREEAHQQLVNDYFSENPLYPSKIFRRRFRMSRPLFLRIVEALGQWSVYFTQRV 150
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
DA ++G+SPL KCT +R LA G AD +DEY+KIGETT +E ++ F KG+ ++ + Y
Sbjct: 151 DAVNRKGLSPLQKCTAAIRQLATGSGADELDEYLKIGETTAMEAMKNFVKGLQDVFGERY 210
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LR PT ED +R+L + E G P
Sbjct: 211 LRRPTMEDTERLLQLGEKRGFP 232
>gb|AAX96772.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 403
Score = 147 bits (372), Expect = 4e-34
Identities = 66/142 (46%), Positives = 97/142 (67%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
R+++ R + + L+ DYF+ P Y+D FRRR+RM+KH+FLRIV L D YFT R+
Sbjct: 67 RRYVDRPYEESKHGLLKDYFVQNPVYNDTTFRRRFRMKKHLFLRIVEALGQWDKYFTLRM 126
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
DA + G+SPL KCT+ + L NG AD +DEY+ IG++TT+ECL+ F KG+I ++ EY
Sbjct: 127 DALNRPGLSPLKKCTSAICQLGNGSPADQLDEYLNIGDSTTVECLKMFVKGVIEVFGAEY 186
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LR P +D++R++ + E G P
Sbjct: 187 LRRPMVQDVERLVQIGERRGFP 208
>gb|AAX96665.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 408
Score = 147 bits (372), Expect = 4e-34
Identities = 66/142 (46%), Positives = 97/142 (67%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
R+++ R + + L+ DYF+ P Y+D FRRR+RM+KH+FLRIV L D YFT R+
Sbjct: 67 RRYVDRPYEESKHGLLKDYFVQNPVYNDTTFRRRFRMKKHLFLRIVEALGQWDKYFTLRM 126
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
DA + G+SPL KCT+ + L NG AD +DEY+ IG++TT+ECL+ F KG+I ++ EY
Sbjct: 127 DALNRPGLSPLKKCTSAICQLGNGSPADQLDEYLNIGDSTTVECLKMFVKGVIEVFGAEY 186
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LR P +D++R++ + E G P
Sbjct: 187 LRRPMVQDVERLVQIGERRGFP 208
>emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa (japonica cultivar-group)]
gi|50927987|ref|XP_473521.1| OSJNBa0017B10.12 [Oryza
sativa (japonica cultivar-group)]
Length = 454
Score = 144 bits (364), Expect = 4e-33
Identities = 81/177 (45%), Positives = 102/177 (56%), Gaps = 6/177 (3%)
Query: 12 DLEAYLEKSEREDTYILNRFRDRRNLILEDSAPRGRKHLSRDHAGANQRLIDDYFLNEPT 71
D +Y+E ED + + R + RK++ R+ A RL YFL P
Sbjct: 38 DTSSYIETQIEEDISYQIKKQQR------GPPTQQRKYIRRERQDAEDRLKAYYFLENPM 91
Query: 72 YDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRVDAAKKEGISPLAKCTTTMRMLANGV 131
Y+D FR RYRM+KH+FL IV LS F QR DA K G SPL KCT +RMLA G
Sbjct: 92 YNDTQFRWRYRMKKHLFLHIVQTLSHWSPVFQQRKDAFGKVGFSPLLKCTAALRMLAYGT 151
Query: 132 AADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEYLRAPTQEDLQRILHVNEMWGVP 188
+AD +DE ++I ETT +E L FCKGII + +YLR PT ED+QR+LHV E G P
Sbjct: 152 SADILDENLQIAETTVIESLVNFCKGIIDCFGPKYLRRPTAEDIQRLLHVGEARGFP 208
>gb|AAX96400.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 454
Score = 143 bits (361), Expect = 8e-33
Identities = 72/149 (48%), Positives = 97/149 (64%), Gaps = 2/149 (1%)
Query: 42 SAPRG--RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSD 99
S PR RK++ R+ ++RL++DYF +P Y D FR RYRM++ +FLRIV L
Sbjct: 61 SHPRSGERKYVKRNREEGHRRLVEDYFSKDPIYSDKQFRARYRMRRPLFLRIVHALGEWS 120
Query: 100 NYFTQRVDAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGII 159
YFT R DA ++G+SPL KCT +R LA G DA+DEY+ G +T LECL F +G+I
Sbjct: 121 PYFTSRRDAINRQGLSPLQKCTIAIRALACGTLGDAIDEYVDTGISTALECLDWFVEGVI 180
Query: 160 RLYEQEYLRAPTQEDLQRILHVNEMWGVP 188
+ +EYLR+PT ED+Q IL +NE G P
Sbjct: 181 DNFGEEYLRSPTSEDMQHILQMNEARGFP 209
>ref|XP_470831.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|29824487|gb|AAP04202.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 626
Score = 142 bits (358), Expect = 2e-32
Identities = 67/142 (47%), Positives = 96/142 (67%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
R+++ R+ +N L+ +YF P Y D +FRRR+RM+K +FLRIV+ LS YFT R+
Sbjct: 241 RRYIPRNREASNADLVANYFSESPIYTDKMFRRRFRMRKPLFLRIVSALSEWSPYFTNRL 300
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
DA + G SPL KCT +RMLA G AD +DE +KIG T LECL +F +G+I ++ +EY
Sbjct: 301 DATGRAGHSPLQKCTAAIRMLAYGTPADQLDEVLKIGPNTALECLGKFAEGVIEIFRKEY 360
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LRAP ++++R+L V + G P
Sbjct: 361 LRAPRSDEVERLLQVADSRGFP 382
>gb|AAL79730.1| putative ribosomal protein [Oryza sativa]
Length = 915
Score = 142 bits (357), Expect = 2e-32
Identities = 81/198 (40%), Positives = 119/198 (59%), Gaps = 12/198 (6%)
Query: 2 ISQKMDPPE-FDLEAYLEKSEREDTYILNRFRDRRNLILEDSA---PRGR-------KHL 50
+ +++DP E + LE +L + E +++ + D+ +E S+ PR R +++
Sbjct: 473 VLEEIDPAEVYTLEDFLAEDEIMESF-RRKIGDKLKAKIEGSSSGPPRRRQRQSGPRRYI 531
Query: 51 SRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRVDAAK 110
R ++ L+ +YF P Y D FRRR+RM K +FLRIV LS+ D +FTQRVDA
Sbjct: 532 PRPREKGHEDLVANYFSANPIYTDEQFRRRFRMNKPLFLRIVNALSNWDQFFTQRVDATG 591
Query: 111 KEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEYLRAP 170
++ SPL KCT +RML G ADA+DE +KI +T+LECL +F GII + EYLR P
Sbjct: 592 RDSHSPLQKCTAAIRMLGYGTPADALDEVLKIAASTSLECLGKFAVGIIECFGSEYLRPP 651
Query: 171 TQEDLQRILHVNEMWGVP 188
T ++L++IL NE G P
Sbjct: 652 TSDELEKILQENEARGFP 669
>ref|XP_471573.1| OSJNBb0032D24.14 [Oryza sativa (japonica cultivar-group)]
gi|38344363|emb|CAE04084.2| OSJNBb0032D24.14 [Oryza
sativa (japonica cultivar-group)]
Length = 450
Score = 138 bits (348), Expect = 3e-31
Identities = 77/182 (42%), Positives = 103/182 (56%), Gaps = 6/182 (3%)
Query: 7 DPPEFDLEAYLEKSEREDTYILNRFRDRRNLILEDSAPRGRKHLSRDHAGANQRLIDDYF 66
DP E LEA LE + + ++ N + R+++SRDH + RL YF
Sbjct: 31 DPMEAQLEARLEA--QLEARLMAHLAGSSNQL----GGYTRRYISRDHEDDHNRLFAKYF 84
Query: 67 LNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRVDAAKKEGISPLAKCTTTMRM 126
P Y D FRRR+RM++H+FLRIV L YF R DA K G+SPL KCT MRM
Sbjct: 85 SESPLYTDDQFRRRFRMRRHLFLRIVQALGVWSPYFRLRRDAFGKVGLSPLQKCTAAMRM 144
Query: 127 LANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEYLRAPTQEDLQRILHVNEMWG 186
LA G AD +DE + E+T +EC+ F +G+ L+ ++YLR PT ED+QR+L E G
Sbjct: 145 LAYGTPADLMDETFGVAESTAMECMINFVQGVRHLFGEQYLRRPTVEDIQRLLQFGEAHG 204
Query: 187 VP 188
P
Sbjct: 205 FP 206
>dbj|BAD36605.1| ribosomal protein-like [Oryza sativa (japonica cultivar-group)]
Length = 510
Score = 135 bits (341), Expect = 2e-30
Identities = 72/188 (38%), Positives = 108/188 (57%), Gaps = 4/188 (2%)
Query: 5 KMDPPE-FDLEAYLEKSEREDTYILNRFRDRRNLILEDSAP---RGRKHLSRDHAGANQR 60
++DP E + +E YL++ + + + + S+ R R++ RD G + R
Sbjct: 14 EVDPTEIYTMEDYLQRQQAWNAAAAQLASHLLHTLGPSSSQQPRRRRRYCRRDRIGGHAR 73
Query: 61 LIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRVDAAKKEGISPLAKC 120
++ DYF P Y D FRRR+RM++ +FLRI+ L YFTQRVD + G+SP+ KC
Sbjct: 74 IMADYFCENPVYSDRDFRRRFRMRRPLFLRILNALGEWSEYFTQRVDGIGQLGLSPIQKC 133
Query: 121 TTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEYLRAPTQEDLQRILH 180
T RMLA +AD VDEY +IG +T LE L+ FC+G+I ++ EYL P +D R+L
Sbjct: 134 TAVNRMLAYAASADQVDEYCRIGGSTALESLKLFCQGVIEIFGPEYLHQPNVDDTGRLLQ 193
Query: 181 VNEMWGVP 188
++ G P
Sbjct: 194 IHGSRGFP 201
>ref|XP_475696.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|48475076|gb|AAT44145.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 443
Score = 133 bits (335), Expect = 8e-30
Identities = 64/142 (45%), Positives = 92/142 (64%)
Query: 47 RKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQRV 106
R+++ R+ + L+ +YF P Y D +FRRR+RM++ +FLRIV +LS YFTQRV
Sbjct: 59 RRYIPRNRERGHDDLVANYFSANPIYTDEMFRRRFRMRRPLFLRIVHELSEWSPYFTQRV 118
Query: 107 DAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQEY 166
DA + +SPL KC +RML G AAD +DE ++I +T LECL +F +G+I + EY
Sbjct: 119 DATGRNSLSPLQKCIAAIRMLGYGTAADQLDEVLRIAASTCLECLGKFAEGVIEKFGDEY 178
Query: 167 LRAPTQEDLQRILHVNEMWGVP 188
LR P ++L++IL NE G P
Sbjct: 179 LRLPRADELEKILQENEARGFP 200
>gb|AAM45005.1| unknown protein [Arabidopsis thaliana] gi|15292885|gb|AAK92813.1|
unknown protein [Arabidopsis thaliana]
gi|9294258|dbj|BAB02160.1| unnamed protein product
[Arabidopsis thaliana] gi|18400709|ref|NP_566505.1|
expressed protein [Arabidopsis thaliana]
Length = 415
Score = 129 bits (323), Expect = 2e-28
Identities = 66/144 (45%), Positives = 92/144 (63%)
Query: 45 RGRKHLSRDHAGANQRLIDDYFLNEPTYDDGIFRRRYRMQKHVFLRIVADLSSSDNYFTQ 104
R R + R + L +DYF + + FRRR+RM+K +FLRIV LSS +F
Sbjct: 43 RKRAYFDRKREEGHVLLWNDYFSDNAIFPLQTFRRRFRMKKPLFLRIVDRLSSELMFFQH 102
Query: 105 RVDAAKKEGISPLAKCTTTMRMLANGVAADAVDEYIKIGETTTLECLRRFCKGIIRLYEQ 164
R DA + G SP+ KCT +R+LA G A+DAVDEY+++GETT + CL F KGII +
Sbjct: 103 RRDATGRFGHSPIQKCTAAIRLLAYGYASDAVDEYLRMGETTAMSCLENFTKGIISFFGD 162
Query: 165 EYLRAPTQEDLQRILHVNEMWGVP 188
EYLRAPT +L+R+L++ ++ G P
Sbjct: 163 EYLRAPTATNLRRLLNIGKIRGFP 186
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.345 0.152 0.506
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 607,358,598
Number of Sequences: 2540612
Number of extensions: 22409959
Number of successful extensions: 82657
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 82587
Number of HSP's gapped (non-prelim): 71
length of query: 400
length of database: 863,360,394
effective HSP length: 130
effective length of query: 270
effective length of database: 533,080,834
effective search space: 143931825180
effective search space used: 143931825180
T: 11
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0349b.2