BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.4
(142 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA43646.1| P-glycoprotein [Arabidopsis thaliana] gi|4883607... 146 9e-35
gb|AAM98246.1| putative ABC transporter [Arabidopsis thaliana] 146 9e-35
gb|AAD10836.1| P-glycoprotein [Solanum tuberosum] 143 8e-34
gb|AAR10387.1| P-glycoprotein 1 [Sorghum bicolor] 126 1e-28
ref|XP_483820.1| putative P-glycoprotein 1 [Oryza sativa (japoni... 121 4e-27
ref|XP_483819.1| putative P-glycoprotein 1 [Oryza sativa (japoni... 121 4e-27
ref|XP_483818.1| putative P-glycoprotein 1 [Oryza sativa (japoni... 121 4e-27
emb|CAD59580.1| MDR-like ABC transporter [Oryza sativa (japonica... 121 4e-27
gb|AAR00316.1| PGP1; ZMPGP1 [Zea mays] 99 2e-20
ref|XP_474071.1| OSJNBb0079B02.13 [Oryza sativa (japonica cultiv... 97 6e-20
emb|CAD40903.1| OSJNBa0036B21.21 [Oryza sativa (japonica cultiva... 97 8e-20
emb|CAD59581.1| MDR-like ABC transporter [Oryza sativa (japonica... 97 8e-20
gb|AAF23176.1| P-glycoprotein [Gossypium hirsutum] 85 3e-16
dbj|BAB02129.1| P-glycoprotein; multi-drug resistance related; A... 85 4e-16
dbj|BAC41846.1| putative P-glycoprotein [Arabidopsis thaliana] 85 4e-16
gb|AAN28720.2| MDR-like p-glycoprotein [Arabidopsis thaliana] 85 4e-16
ref|XP_464406.1| putative multidrug resistance p-glycoprotein [O... 82 2e-15
emb|CAA71277.1| P-glycoprotein-2 [Arabidopsis thaliana] gi|21082... 81 5e-15
emb|CAD41096.2| OSJNBb0011N17.13 [Oryza sativa (japonica cultiva... 81 5e-15
emb|CAD59592.1| MDR-like ABC transporter [Oryza sativa (japonica... 81 5e-15
>emb|CAA43646.1| P-glycoprotein [Arabidopsis thaliana] gi|4883607|gb|AAD31576.1|
putative ABC transporter [Arabidopsis thaliana]
gi|15228052|ref|NP_181228.1| multidrug resistance
P-glycoprotein (PGP1) [Arabidopsis thaliana]
gi|419760|pir||A42150 P-glycoprotein pgp1 - Arabidopsis
thaliana
Length = 1286
Score = 146 bits (369), Expect = 9e-35
Identities = 75/82 (91%), Positives = 78/82 (94%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDRFMIGRTTL+IAHRLSTIRKADLVAVLQQGSVSEIGTHDEL SKGENGVYA
Sbjct: 543 KLVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAK 602
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
L+KMQE AHETAM+NARKSSAR
Sbjct: 603 LIKMQEAAHETAMSNARKSSAR 624
Score = 76.6 bits (187), Expect = 1e-13
Identities = 35/82 (42%), Positives = 54/82 (65%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
++VQEALD+ GRT++V+AHRLSTIR A ++AV+ G V+E G+H L +G+YA
Sbjct: 1199 RSVQEALDQACSGRTSIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNHPDGIYAR 1258
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
++++Q H + SS+R
Sbjct: 1259 MIQLQRFTHTQVIGMTSGSSSR 1280
>gb|AAM98246.1| putative ABC transporter [Arabidopsis thaliana]
Length = 1286
Score = 146 bits (369), Expect = 9e-35
Identities = 75/82 (91%), Positives = 78/82 (94%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDRFMIGRTTL+IAHRLSTIRKADLVAVLQQGSVSEIGTHDEL SKGENGVYA
Sbjct: 543 KLVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAK 602
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
L+KMQE AHETAM+NARKSSAR
Sbjct: 603 LIKMQEAAHETAMSNARKSSAR 624
Score = 76.6 bits (187), Expect = 1e-13
Identities = 35/82 (42%), Positives = 54/82 (65%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
++VQEALD+ GRT++V+AHRLSTIR A ++AV+ G V+E G+H L +G+YA
Sbjct: 1199 RSVQEALDQACSGRTSIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNHPDGIYAR 1258
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
++++Q H + SS+R
Sbjct: 1259 MIQLQRFTHTQVIGMTSGSSSR 1280
>gb|AAD10836.1| P-glycoprotein [Solanum tuberosum]
Length = 1313
Score = 143 bits (361), Expect = 8e-34
Identities = 73/82 (89%), Positives = 78/82 (95%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIG+HDEL SKGENG+YA
Sbjct: 569 KLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGSHDELMSKGENGMYAK 628
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
L+KMQE AHETA++NARKSSAR
Sbjct: 629 LIKMQEAAHETALSNARKSSAR 650
Score = 80.5 bits (197), Expect = 8e-15
Identities = 37/81 (45%), Positives = 55/81 (67%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALDR G+TT+V+AHRLSTIR A ++AV+ G V+E G+H L +G+YA
Sbjct: 1224 RCVQEALDRACAGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYSDGIYAR 1283
Query: 113 LVKMQEMAHETAMNNARKSSA 133
++++Q H A+N A S++
Sbjct: 1284 MIQLQRFTHGEAVNMATGSTS 1304
>gb|AAR10387.1| P-glycoprotein 1 [Sorghum bicolor]
Length = 1402
Score = 126 bits (316), Expect = 1e-28
Identities = 63/82 (76%), Positives = 70/82 (84%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDRFMIGRTTLVIAHR+STIRKAD+VAVLQ G VSE+G HDEL +KGENG YA
Sbjct: 647 KLVQEALDRFMIGRTTLVIAHRMSTIRKADVVAVLQGGPVSEMGAHDELMAKGENGTYAK 706
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
++MQE AHE A NAR+SSAR
Sbjct: 707 FIRMQEQAHEAAFVNARRSSAR 728
Score = 65.9 bits (159), Expect = 2e-10
Identities = 30/67 (44%), Positives = 46/67 (67%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEAL+R GRTT+V+AHRL+T+R A +AV+ G V+E G+H L +G YA
Sbjct: 1305 RCVQEALERAGSGRTTIVVAHRLATVRGAHTIAVIDDGKVAEQGSHSHLLKHHPDGCYAR 1364
Query: 113 LVKMQEM 119
++++Q +
Sbjct: 1365 MLQLQRL 1371
>ref|XP_483820.1| putative P-glycoprotein 1 [Oryza sativa (japonica cultivar-group)]
gi|45735909|dbj|BAD12941.1| putative P-glycoprotein 1
[Oryza sativa (japonica cultivar-group)]
Length = 760
Score = 121 bits (303), Expect = 4e-27
Identities = 62/82 (75%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQ G++SE+GTHDEL ++G+ G YA
Sbjct: 23 KLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQGGAISEVGTHDELMARGD-GTYAR 81
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
L++MQE AHE A+ AR+SSAR
Sbjct: 82 LIRMQEQAHEAALVAARRSSAR 103
Score = 63.2 bits (152), Expect = 1e-09
Identities = 30/70 (42%), Positives = 48/70 (67%), Gaps = 1/70 (1%)
Query: 53 KAVQEALDRFM-IGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYA 111
++VQEAL GRTT+V+AHRL+T+R A +AV+ G V+E G+H L + +G YA
Sbjct: 675 RSVQEALASSSGSGRTTIVVAHRLATVRNAHTIAVIDDGKVAEQGSHSHLLNHHPDGCYA 734
Query: 112 NLVKMQEMAH 121
++++Q ++H
Sbjct: 735 RMLQLQRLSH 744
>ref|XP_483819.1| putative P-glycoprotein 1 [Oryza sativa (japonica cultivar-group)]
gi|45735908|dbj|BAD12940.1| putative P-glycoprotein 1
[Oryza sativa (japonica cultivar-group)]
Length = 1344
Score = 121 bits (303), Expect = 4e-27
Identities = 62/82 (75%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQ G++SE+GTHDEL ++G+ G YA
Sbjct: 607 KLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQGGAISEVGTHDELMARGD-GTYAR 665
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
L++MQE AHE A+ AR+SSAR
Sbjct: 666 LIRMQEQAHEAALVAARRSSAR 687
Score = 63.2 bits (152), Expect = 1e-09
Identities = 30/70 (42%), Positives = 48/70 (67%), Gaps = 1/70 (1%)
Query: 53 KAVQEALDRFM-IGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYA 111
++VQEAL GRTT+V+AHRL+T+R A +AV+ G V+E G+H L + +G YA
Sbjct: 1259 RSVQEALASSSGSGRTTIVVAHRLATVRNAHTIAVIDDGKVAEQGSHSHLLNHHPDGCYA 1318
Query: 112 NLVKMQEMAH 121
++++Q ++H
Sbjct: 1319 RMLQLQRLSH 1328
>ref|XP_483818.1| putative P-glycoprotein 1 [Oryza sativa (japonica cultivar-group)]
gi|45735907|dbj|BAD12939.1| putative P-glycoprotein 1
[Oryza sativa (japonica cultivar-group)]
Length = 952
Score = 121 bits (303), Expect = 4e-27
Identities = 62/82 (75%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQ G++SE+GTHDEL ++G+ G YA
Sbjct: 523 KLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQGGAISEVGTHDELMARGD-GTYAR 581
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
L++MQE AHE A+ AR+SSAR
Sbjct: 582 LIRMQEQAHEAALVAARRSSAR 603
>emb|CAD59580.1| MDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
Length = 1349
Score = 121 bits (303), Expect = 4e-27
Identities = 62/82 (75%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQ G++SE+GTHDEL ++G+ G YA
Sbjct: 612 KLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQGGAISEVGTHDELMARGD-GTYAR 670
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
L++MQE AHE A+ AR+SSAR
Sbjct: 671 LIRMQEQAHEAALVAARRSSAR 692
Score = 63.2 bits (152), Expect = 1e-09
Identities = 30/70 (42%), Positives = 48/70 (67%), Gaps = 1/70 (1%)
Query: 53 KAVQEALDRFM-IGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYA 111
++VQEAL GRTT+V+AHRL+T+R A +AV+ G V+E G+H L + +G YA
Sbjct: 1264 RSVQEALASSSGSGRTTIVVAHRLATVRNAHTIAVIDDGKVAEQGSHSHLLNHHPDGCYA 1323
Query: 112 NLVKMQEMAH 121
++++Q ++H
Sbjct: 1324 RMLQLQRLSH 1333
>gb|AAR00316.1| PGP1; ZMPGP1 [Zea mays]
Length = 1394
Score = 99.4 bits (246), Expect = 2e-20
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query: 53 KAVQEALDRFMIGRTTLVI-AHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYA 111
K VQEALDRFM+GRTTL A KAD+VAVLQ G+VSE+ HDEL +KGENG YA
Sbjct: 637 KLVQEALDRFMMGRTTLGDRATGCPPSAKADVVAVLQGGAVSEMSAHDELMAKGENGTYA 696
Query: 112 NLVKMQEMAHETAMNNARKSSAR 134
L++MQE AHE A+ NAR+SSAR
Sbjct: 697 KLIRMQEQAHEAALVNARRSSAR 719
Score = 63.2 bits (152), Expect = 1e-09
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEAL+R GRTT+V+AHRL+T+R A +AV+ G V+E G+H L +G YA
Sbjct: 1296 RCVQEALERAGSGRTTIVVAHRLATVRGAHTIAVIDDGKVAEQGSHSHLLKHHPDGCYAR 1355
Query: 113 LVKM 116
++++
Sbjct: 1356 MLQL 1359
>ref|XP_474071.1| OSJNBb0079B02.13 [Oryza sativa (japonica cultivar-group)]
gi|38347317|emb|CAE05967.2| OSJNBa0063C18.8 [Oryza
sativa (japonica cultivar-group)]
gi|38344910|emb|CAD41854.2| OSJNBb0079B02.13 [Oryza
sativa (japonica cultivar-group)]
gi|27368849|emb|CAD59582.1| MDR-like ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 1268
Score = 97.4 bits (241), Expect = 6e-20
Identities = 47/84 (55%), Positives = 61/84 (71%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
VQEALDR M GRTT+V+AHRLSTIR +++AV+QQG V E GTHDEL +KG +G YA+L+
Sbjct: 557 VQEALDRLMTGRTTVVVAHRLSTIRNVNMIAVIQQGQVVETGTHDELLAKGSSGAYASLI 616
Query: 115 KMQEMAHETAMNNARKSSAR*LSL 138
+ QEMA + A +R + L
Sbjct: 617 RFQEMAQNRDLGGASTRRSRSMHL 640
Score = 68.6 bits (166), Expect = 3e-11
Identities = 34/66 (51%), Positives = 49/66 (73%), Gaps = 1/66 (1%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
+QEAL+R M GRTT+++AHRLSTIR D +AV+Q G + E G+H +L S+ E G Y+ L+
Sbjct: 1204 LQEALERLMKGRTTVLVAHRLSTIRGVDRIAVVQDGRIVEHGSHSDLVSRPE-GAYSRLL 1262
Query: 115 KMQEMA 120
++Q A
Sbjct: 1263 QLQHHA 1268
>emb|CAD40903.1| OSJNBa0036B21.21 [Oryza sativa (japonica cultivar-group)]
gi|50924782|ref|XP_472741.1| OSJNBa0036B21.21 [Oryza
sativa (japonica cultivar-group)]
Length = 1252
Score = 97.1 bits (240), Expect = 8e-20
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
VQEALDR M+GRTT+V+AHRLSTIR D++AV+QQG V E GTHDEL +KG +G YA L+
Sbjct: 530 VQEALDRLMVGRTTVVVAHRLSTIRCVDMIAVIQQGQVVETGTHDELLAKGSSGAYAALI 589
Query: 115 KMQEMAHETAMN--NARKSSAR*LS 137
+ QEMA + RKS + LS
Sbjct: 590 RFQEMARNRDFRGPSTRKSRSSRLS 614
Score = 65.9 bits (159), Expect = 2e-10
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
+QEAL+R M GRT +++AHRLSTIR D +AV+Q G V E G+H EL S+ +G Y+ L+
Sbjct: 1187 LQEALERIMKGRTAVLVAHRLSTIRGVDSIAVVQDGRVVEQGSHGELVSR-PDGAYSRLL 1245
Query: 115 KMQ 117
++Q
Sbjct: 1246 QLQ 1248
>emb|CAD59581.1| MDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
Length = 1256
Score = 97.1 bits (240), Expect = 8e-20
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
VQEALDR M+GRTT+V+AHRLSTIR D++AV+QQG V E GTHDEL +KG +G YA L+
Sbjct: 544 VQEALDRLMVGRTTVVVAHRLSTIRCVDMIAVIQQGQVVETGTHDELLAKGSSGAYAALI 603
Query: 115 KMQEMAHETAMN--NARKSSAR*LS 137
+ QEMA + RKS + LS
Sbjct: 604 RFQEMARNRDFRGPSTRKSRSSRLS 628
Score = 65.9 bits (159), Expect = 2e-10
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
+QEAL+R M GRT +++AHRLSTIR D +AV+Q G V E G+H EL S+ +G Y+ L+
Sbjct: 1191 LQEALERIMKGRTAVLVAHRLSTIRGVDSIAVVQDGRVVEQGSHGELVSR-PDGAYSRLL 1249
Query: 115 KMQ 117
++Q
Sbjct: 1250 QLQ 1252
>gb|AAF23176.1| P-glycoprotein [Gossypium hirsutum]
Length = 1249
Score = 85.1 bits (209), Expect = 3e-16
Identities = 42/66 (63%), Positives = 53/66 (79%), Gaps = 1/66 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K+VQEALDR M+GRTT+V+AHRLSTIR AD++AV+Q G + E GTHDEL S N Y++
Sbjct: 544 KSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQNGKIVETGTHDELIS-NPNSTYSS 602
Query: 113 LVKMQE 118
LV+ QE
Sbjct: 603 LVQHQE 608
Score = 66.6 bits (161), Expect = 1e-10
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR M RTT+++AHRLSTI+ AD ++V+Q G + E GTH L + NG Y
Sbjct: 1179 RVVQQALDRLMRNRTTVMVAHRLSTIKNADRISVIQGGRIIEQGTHSSLI-ENRNGPYFK 1237
Query: 113 LVKMQE 118
L+ +Q+
Sbjct: 1238 LINLQQ 1243
>dbj|BAB02129.1| P-glycoprotein; multi-drug resistance related; ABC transporter-like
protein [Arabidopsis thaliana]
gi|15228506|ref|NP_189528.1| multidrug resistance
P-glycoprotein, putative [Arabidopsis thaliana]
Length = 1252
Score = 84.7 bits (208), Expect = 4e-16
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
VQEALDR M+GRTT+V+AHRL TIR D +AV+QQG V E GTH+EL +K +G YA+L+
Sbjct: 542 VQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAK--SGAYASLI 599
Query: 115 KMQEMAHETAMNN 127
+ QEM +N
Sbjct: 600 RFQEMVGTRDFSN 612
Score = 69.3 bits (168), Expect = 2e-11
Identities = 34/63 (53%), Positives = 47/63 (73%), Gaps = 1/63 (1%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
+QEAL+R M GRTT+V+AHRLSTIR D + V+Q G + E G+H EL S+ E G Y+ L+
Sbjct: 1187 LQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDGRIVEQGSHSELVSRPE-GAYSRLL 1245
Query: 115 KMQ 117
++Q
Sbjct: 1246 QLQ 1248
>dbj|BAC41846.1| putative P-glycoprotein [Arabidopsis thaliana]
Length = 1252
Score = 84.7 bits (208), Expect = 4e-16
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
VQEALDR M+GRTT+V+AHRL TIR D +AV+QQG V E GTH+EL +K +G YA+L+
Sbjct: 542 VQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAK--SGAYASLI 599
Query: 115 KMQEMAHETAMNN 127
+ QEM +N
Sbjct: 600 RFQEMVGTRDFSN 612
Score = 66.2 bits (160), Expect = 2e-10
Identities = 33/63 (52%), Positives = 46/63 (72%), Gaps = 1/63 (1%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
+QEAL+R M GRTT+V+AHRLSTIR D + V+Q + E G+H EL S+ E G Y+ L+
Sbjct: 1187 LQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDERIVEQGSHSELVSRPE-GAYSRLL 1245
Query: 115 KMQ 117
++Q
Sbjct: 1246 QLQ 1248
>gb|AAN28720.2| MDR-like p-glycoprotein [Arabidopsis thaliana]
Length = 1252
Score = 84.7 bits (208), Expect = 4e-16
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
VQEALDR M+GRTT+V+AHRL TIR D +AV+QQG V E GTH+EL +K +G YA+L+
Sbjct: 542 VQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAK--SGAYASLI 599
Query: 115 KMQEMAHETAMNN 127
+ QEM +N
Sbjct: 600 RFQEMVGTRDFSN 612
Score = 69.3 bits (168), Expect = 2e-11
Identities = 34/63 (53%), Positives = 47/63 (73%), Gaps = 1/63 (1%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
+QEAL+R M GRTT+V+AHRLSTIR D + V+Q G + E G+H EL S+ E G Y+ L+
Sbjct: 1187 LQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDGRIVEQGSHSELVSRPE-GAYSRLL 1245
Query: 115 KMQ 117
++Q
Sbjct: 1246 QLQ 1248
>ref|XP_464406.1| putative multidrug resistance p-glycoprotein [Oryza sativa
(japonica cultivar-group)] gi|46390962|dbj|BAD16475.1|
putative multidrug resistance p-glycoprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1245
Score = 82.4 bits (202), Expect = 2e-15
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALD +GRTT+VIAHRLSTIR AD++AV+Q G V E+G HDEL + +NG+Y++
Sbjct: 534 RVVQEALDLASMGRTTIVIAHRLSTIRNADIIAVMQSGEVKELGPHDELIA-NDNGLYSS 592
Query: 113 LVKMQE 118
LV++Q+
Sbjct: 593 LVRLQQ 598
Score = 81.6 bits (200), Expect = 4e-15
Identities = 39/66 (59%), Positives = 52/66 (78%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDR MIGRT++V+AHRLSTI+ DL+ VL++G+V E GTH L +KG +G Y +
Sbjct: 1172 KVVQEALDRVMIGRTSVVVAHRLSTIQNCDLITVLEKGTVVEKGTHASLMAKGLSGTYFS 1231
Query: 113 LVKMQE 118
LV +Q+
Sbjct: 1232 LVNLQQ 1237
>emb|CAA71277.1| P-glycoprotein-2 [Arabidopsis thaliana] gi|2108254|emb|CAA71276.1|
P-glycoprotein-2 [Arabidopsis thaliana]
gi|7269447|emb|CAB79451.1| P-glycoprotein-2 (pgp2)
[Arabidopsis thaliana] gi|4538925|emb|CAB39661.1|
P-glycoprotein-2 (pgp2) [Arabidopsis thaliana]
gi|15236067|ref|NP_194326.1| multidrug resistance
P-glycoprotein, putative [Arabidopsis thaliana]
gi|7442648|pir||T04251 P-glycoprotein 2 - Arabidopsis
thaliana
Length = 1233
Score = 81.3 bits (199), Expect = 5e-15
Identities = 37/68 (54%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K+VQEALDR M+GRTT+V+AHRLST+R AD++AV+ +G + E G H+ L S +G Y++
Sbjct: 536 KSVQEALDRVMVGRTTVVVAHRLSTVRNADIIAVVHEGKIVEFGNHENLIS-NPDGAYSS 594
Query: 113 LVKMQEMA 120
L+++QE A
Sbjct: 595 LLRLQETA 602
Score = 63.5 bits (153), Expect = 1e-09
Identities = 31/66 (46%), Positives = 46/66 (68%), Gaps = 1/66 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR M RTT+V+AHRLSTI+ AD ++VL G + E G+H +L ++G Y
Sbjct: 1165 RVVQQALDRLMANRTTVVVAHRLSTIKNADTISVLHGGKIVEQGSHRKLV-LNKSGPYFK 1223
Query: 113 LVKMQE 118
L+ +Q+
Sbjct: 1224 LISLQQ 1229
>emb|CAD41096.2| OSJNBb0011N17.13 [Oryza sativa (japonica cultivar-group)]
gi|50925231|ref|XP_472917.1| OSJNBb0011N17.13 [Oryza
sativa (japonica cultivar-group)]
Length = 1271
Score = 81.3 bits (199), Expect = 5e-15
Identities = 40/69 (57%), Positives = 51/69 (72%), Gaps = 3/69 (4%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSK---GENGV 109
+ VQ+ALDR +GRTT+++AHRLST+RKAD +AVL G V E GTHDEL GE GV
Sbjct: 539 RTVQDALDRASVGRTTVIVAHRLSTLRKADTIAVLDAGRVVEAGTHDELLGMDDGGEGGV 598
Query: 110 YANLVKMQE 118
YA +V +Q+
Sbjct: 599 YARMVHLQK 607
Score = 73.2 bits (178), Expect = 1e-12
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+A+DR + GRT +V+AHRLST+ K+D +AV++ G V+E G H EL + G G Y N
Sbjct: 1197 RLVQDAVDRMLRGRTCVVVAHRLSTVEKSDTIAVVKDGRVAERGRHHELLAVGRAGTYYN 1256
Query: 113 LVKMQ 117
L+K+Q
Sbjct: 1257 LIKLQ 1261
>emb|CAD59592.1| MDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
Length = 1279
Score = 81.3 bits (199), Expect = 5e-15
Identities = 40/69 (57%), Positives = 51/69 (72%), Gaps = 3/69 (4%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSK---GENGV 109
+ VQ+ALDR +GRTT+++AHRLST+RKAD +AVL G V E GTHDEL GE GV
Sbjct: 547 RTVQDALDRASVGRTTVIVAHRLSTLRKADTIAVLDAGRVVEAGTHDELLGMDDGGEGGV 606
Query: 110 YANLVKMQE 118
YA +V +Q+
Sbjct: 607 YARMVHLQK 615
Score = 73.2 bits (178), Expect = 1e-12
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+A+DR + GRT +V+AHRLST+ K+D +AV++ G V+E G H EL + G G Y N
Sbjct: 1205 RLVQDAVDRMLRGRTCVVVAHRLSTVEKSDTIAVVKDGRVAERGRHHELLAVGRAGTYYN 1264
Query: 113 LVKMQ 117
L+K+Q
Sbjct: 1265 LIKLQ 1269
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.335 0.142 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,803,451
Number of Sequences: 2540612
Number of extensions: 5795654
Number of successful extensions: 27576
Number of sequences better than 10.0: 3412
Number of HSP's better than 10.0 without gapping: 3149
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 23758
Number of HSP's gapped (non-prelim): 3962
length of query: 142
length of database: 863,360,394
effective HSP length: 118
effective length of query: 24
effective length of database: 563,568,178
effective search space: 13525636272
effective search space used: 13525636272
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0346.4