BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.3
(374 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179432.3| expressed protein [Arabidopsis thaliana] 372 e-101
gb|AAD15496.1| hypothetical protein [Arabidopsis thaliana] gi|25... 321 3e-86
ref|XP_643146.1| hypothetical protein DDB0217818 [Dictyostelium ... 73 1e-11
gb|AAL92344.1| hypothetical protein [Dictyostelium discoideum] 68 5e-10
gb|AAW27781.1| unknown [Schistosoma japonicum] 41 0.052
gb|AAM10496.1| S-phase 2 protein [Homo sapiens] 40 0.088
gb|EAK87240.1| hypothetical protein UM06383.1 [Ustilago maydis 5... 40 0.12
ref|NP_981960.1| S-phase 2 protein [Homo sapiens] gi|44662826|re... 40 0.15
dbj|BAB87800.1| dermal papilla derived protein 6 (DERP6) [Homo s... 40 0.15
emb|CAG62907.1| unnamed protein product [Candida glabrata CBS138... 39 0.20
emb|CAA22665.1| SPBC18E5.05c [Schizosaccharomyces pombe] gi|1911... 39 0.34
emb|CAH56280.1| hypothetical protein [Homo sapiens] 38 0.44
ref|NP_061210.1| S-phase 2 protein [Mus musculus] gi|2183323|gb|... 38 0.57
emb|CAG90984.1| unnamed protein product [Debaryomyces hansenii C... 38 0.57
emb|CAI35160.1| retinoic acid induced 12 [Mus musculus] gi|13277... 37 0.75
emb|CAG00709.1| unnamed protein product [Tetraodon nigroviridis] 37 0.75
dbj|BAB28944.1| unnamed protein product [Mus musculus] 37 0.75
ref|XP_314123.2| ENSANGP00000022479 [Anopheles gambiae str. PEST... 37 0.98
ref|NP_198440.1| 3'-5' exonuclease domain-containing protein / h... 37 0.98
ref|XP_126724.6| PREDICTED: fetal Alzheimer antigen [Mus musculus] 37 0.98
>ref|NP_179432.3| expressed protein [Arabidopsis thaliana]
Length = 374
Score = 372 bits (954), Expect = e-101
Identities = 211/384 (54%), Positives = 266/384 (68%), Gaps = 20/384 (5%)
Query: 1 MAESICRTLRDGALEGELAPTLTITDSLTSPLASDVFSHLLLQLSSHLIASKSHSQFRSG 60
MAESI R LRDG EGELAP LTI +++ SP DV +LL LSS ++A KS SQ G
Sbjct: 1 MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQ---G 57
Query: 61 IVIVALSRTPSSYAALFKTKGIHISSSNNNWIHILDCYTDPLGWKEKPRKSQNVTNPSHQ 120
+V++ SR+PS Y L K KGI +SSS+ WI ILDCYTDPLGW ++ S + + S
Sbjct: 58 LVLITFSRSPSFYLQLLKQKGIVVSSSSK-WIRILDCYTDPLGWIDQ--SSTSFSEGSSL 114
Query: 121 VSLATTSYKTVKDLDKLFSVITELGRGLIGENKARFCVAIDSLSELLRHASLQSVAGLLS 180
+ L +K V DL KLFS I E GR L+G K RFCVAIDS++ELLRH+++ V+GLL+
Sbjct: 115 IKL----HKCVSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLT 170
Query: 181 NLRSHDQISSIFGLLHSDLHEERAAAVLEYMSSMVASVAPLHHSA--ERGNLENSLS-EQ 237
+LRSH QISS+F L++DLH+E+ LEY+S+M A++ PL S+ +R LEN S Q
Sbjct: 171 DLRSHAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQ 230
Query: 238 NFTKGRLNVRFKRRNGRVRVTCEEFKVEAGGISLTSVSSADG--ATVAGLLPKVQFNLQL 295
+F KGR +VRFK R GRVRV EE+ V+ GI+ + +SS D A LLPKVQFNLQL
Sbjct: 231 DFGKGRFHVRFKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKVQFNLQL 290
Query: 296 SEKEKTDRAKVVLPFEHQGTGRPIQIYDGRRSLDDNSSEAAPISSGKKE-----NSEMGE 350
SEKE+ ++ KVVLPFEHQ G+ +IYDGRRSL D E P+SS + + + + GE
Sbjct: 291 SEKERVEKEKVVLPFEHQDDGKSNEIYDGRRSLVDGKIETTPLSSMELQTDVVSSGKGGE 350
Query: 351 IIYFRDSDDEMPDSDEDPDDDLDI 374
IIYFRDSDDE PDSDEDPDDDLDI
Sbjct: 351 IIYFRDSDDEHPDSDEDPDDDLDI 374
>gb|AAD15496.1| hypothetical protein [Arabidopsis thaliana] gi|25371281|pir||A84564
hypothetical protein At2g18410 [imported] - Arabidopsis
thaliana
Length = 392
Score = 321 bits (822), Expect = 3e-86
Identities = 200/413 (48%), Positives = 252/413 (60%), Gaps = 60/413 (14%)
Query: 1 MAESICRTLRDGALEGELAPTLTITDSLTSPLASDVFSHLLLQLSSHLIASKSHSQFRSG 60
MAESI R LRDG EGELAP LTI +++ SP DV +LL LSS ++A KS SQ G
Sbjct: 1 MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQ---G 57
Query: 61 IVIVALSRTPSSYAALFKTKGIHISSSNNNWIHILDCYTDPLGWKEKPRKSQNVTNPSHQ 120
+V++ SR+PS Y L K KGI +SSS+ WI ILDCYTDPLGW ++ S + + S
Sbjct: 58 LVLITFSRSPSFYLQLLKQKGIVVSSSSK-WIRILDCYTDPLGWIDQ--SSTSFSEGSSL 114
Query: 121 VSLATTSYKTVKDLDKLFSVITELGR------------------GLIGENKARFCVAIDS 162
+ L +K V DL KLFS I E GR L+G K RFCVAIDS
Sbjct: 115 IKL----HKCVSDLKKLFSSIIEAGRVRSLSKGLYEIKSDCFGAELVGTGKTRFCVAIDS 170
Query: 163 LSELLRHASLQSVAGLLSNLRSHDQISSIFGLLHSDLHEERAAAVLEYMSSMVASVAPLH 222
E++ + + +S QISS+F L++DLH+E+ LEY+S+M A++ PL
Sbjct: 171 KREVIIYLNFESA-----------QISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLC 219
Query: 223 HSAE--RGNLENSLS-EQNFTKGRLNVRFKRRNGRVRVTCEEFKVEAGGISLTSVSSADG 279
S++ R LEN S Q+F KGR +VRFK R GRVRV EE+ V+ GI+ + +SS D
Sbjct: 220 PSSDGQRNALENLFSVHQDFGKGRFHVRFKLRKGRVRVMSEEYHVDQSGINFSPISSVDT 279
Query: 280 ATVA--GLLPK-----------VQFNLQLSEKEKTDRAKVVLPFEHQGTGRPIQIYDGRR 326
A LLPK VQFNLQLSEKE+ ++ KVVLPFEHQ G+ +IYDGRR
Sbjct: 280 VIAATKSLLPKASYLDLLFNYLVQFNLQLSEKERVEKEKVVLPFEHQDDGKSNEIYDGRR 339
Query: 327 SLDDNSSEAAPISSGKKE-----NSEMGEIIYFRDSDDEMPDSDEDPDDDLDI 374
SL D E P+SS + + + + GEIIYFRDSDDE PDSDEDPDDDLDI
Sbjct: 340 SLVDGKIETTPLSSMELQTDVVSSGKGGEIIYFRDSDDEHPDSDEDPDDDLDI 392
>ref|XP_643146.1| hypothetical protein DDB0217818 [Dictyostelium discoideum]
gi|60471275|gb|EAL69238.1| hypothetical protein
DDB0217818 [Dictyostelium discoideum]
Length = 391
Score = 73.2 bits (178), Expect = 1e-11
Identities = 98/396 (24%), Positives = 152/396 (37%), Gaps = 106/396 (26%)
Query: 39 HLLLQLSSHLIASKSHSQFRSGIVIVALSRTPSSYAALFKTKGIHISSSNNNWIHILDCY 98
HLL L S + + S Q R+ I + S T S Y L K +N N+I ++D Y
Sbjct: 42 HLLNHLYSLWLPTIS-KQHRN-IWFLNFSSTISEYKQLSK------KYNNCNFI-VIDYY 92
Query: 99 TDPLGWKEKPRKSQNVTNPSHQVSLATTSYKTVK-DLDKLFSVITELGRGLIGENKARFC 157
+D GW + N N + + +K+VK D + I + + + K
Sbjct: 93 SDSFGWNNNNNNNSNNNNITENLQQIPMIFKSVKHDSASIIKDIQNVYNCVPNKFKENPI 152
Query: 158 VAIDSLSELLRHASLQSVAGLLSNLRSHD------------------------------- 186
+ I+S+S L+ + L L+ +L +++
Sbjct: 153 ILINSISTLILKSGLSDTCNLIRSLTNYNFNKVKQDKEKQEKEQKEQQDNNNNNNKKKIE 212
Query: 187 ---------------------QISSIFGLLHSDLHE--ERAAAVLEYMSSMVASVAPLHH 223
S IF +LH+DLHE + L+Y+SS+ V PL
Sbjct: 213 KINKIETGIEGSVSNRIKMEKSFSCIFAILHTDLHEYEQSVQKQLQYISSVSIQVTPLS- 271
Query: 224 SAERGNLENSLSEQNFTKGRLNVRFKRRNGRVRVTCEEFKVE--AGGI---SLTSVSSAD 278
L+ S S + + + + K+R+GRV E + + G + S S+ +
Sbjct: 272 ----AKLKYSESLPHPYESTITLITKKRSGRVVRNVEYYYINNATGKVEFDSAESLQTKQ 327
Query: 279 GATVAGLLPKVQFNLQLSEKEKTDRAKVVLPFEHQGTGRPIQIYDGRRSLDDNSSEAAPI 338
+ FNL+L+E EK R VVLP+ HQG N++E
Sbjct: 328 EEQEPDPTQNLSFNLKLTEDEKQARDSVVLPYRHQG----------------NNNE---- 367
Query: 339 SSGKKENSEMGEIIYFRDSDDEMPDSDEDPDDDLDI 374
+ + D DDE D DEDPDDDLDI
Sbjct: 368 -----------QTLLIEDPDDEDFD-DEDPDDDLDI 391
>gb|AAL92344.1| hypothetical protein [Dictyostelium discoideum]
Length = 253
Score = 67.8 bits (164), Expect = 5e-10
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 45/208 (21%)
Query: 175 VAGLLSN-LRSHDQISSIFGLLHSDLHE--ERAAAVLEYMSSMVASVAPLHHSAERGNLE 231
+ G +SN ++ S IF +LH+DLHE + L+Y+SS+ V PL L+
Sbjct: 83 IEGSVSNRIKMEKSFSCIFAILHTDLHEYEQSVQKQLQYISSVSIQVTPLS-----AKLK 137
Query: 232 NSLSEQNFTKGRLNVRFKRRNGRVRVTCEEFKVE--AGGI---SLTSVSSADGATVAGLL 286
S S + + + + K+R+GRV E + + G + S S+ +
Sbjct: 138 YSESLPHPYESTITLITKKRSGRVVRNVEYYYINNATGKVEFDSAESLQTKQEEQEPDPT 197
Query: 287 PKVQFNLQLSEKEKTDRAKVVLPFEHQGTGRPIQIYDGRRSLDDNSSEAAPISSGKKENS 346
+ FNL+L+E EK R VVLP+ HQG N++E
Sbjct: 198 QNLSFNLKLTEDEKQARDSVVLPYRHQG----------------NNNE------------ 229
Query: 347 EMGEIIYFRDSDDEMPDSDEDPDDDLDI 374
+ + D DDE D DEDPDDDLDI
Sbjct: 230 ---QTLLIEDPDDEDFD-DEDPDDDLDI 253
>gb|AAW27781.1| unknown [Schistosoma japonicum]
Length = 109
Score = 41.2 bits (95), Expect = 0.052
Identities = 31/101 (30%), Positives = 48/101 (46%), Gaps = 26/101 (25%)
Query: 275 SSADGATVAGLLPKVQFNLQLSEKEKTDRAKVVLPFEHQGTGRPIQIYDGRRSLDDNSSE 334
+ +D ++ LPK FNL ++E EK R+ VV+P +
Sbjct: 34 NESDSLPLSVTLPKSTFNLTMTESEKIARSLVVMP-----------------------HD 70
Query: 335 AAPISSGKKENSEMGEIIYFR-DSDDEMPDSDEDPDDDLDI 374
A +S+ ++N G II ++ D D++ EDPDDDLDI
Sbjct: 71 AVRLSNTVEKNDSAGCIIQYQPDCFDDL--DAEDPDDDLDI 109
>gb|AAM10496.1| S-phase 2 protein [Homo sapiens]
Length = 307
Score = 40.4 bits (93), Expect = 0.088
Identities = 57/241 (23%), Positives = 88/241 (35%), Gaps = 69/241 (28%)
Query: 158 VAIDSLSELLRHASLQSVAGLLSNLRSHDQIS---------SIFGLLHSDLHEERAAAVL 208
+A+DSLS LL ++ +L + D S+ GLLH +LH L
Sbjct: 112 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSRPGDSSSVGKVSVLGLLHEELHGPSPVGAL 171
Query: 209 EYMSSMVASVAPLHHSAERGNLENSLSEQNFTKGRLNVRFKRRNGRVRVTCE-------- 260
++ ++ T G+ + R R R T +
Sbjct: 172 NSLAQTEVTLGG-------------------TMGQASAHILCRRPRQRPTDQTQWFSILP 212
Query: 261 EFKVEAG-GISLTSVSSADGATVAGLLPKVQ------FNLQLSEKEKTDRAKVVLPFEHQ 313
+F ++ G S+ S +D +P+V FNL LS+KE+ R ++LPF+
Sbjct: 213 DFSLDLKEGPSVESQPYSDPH-----IPRVDPTTHLTFNLHLSKKEREARDSLILPFQF- 266
Query: 314 GTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFRDSDDEMPDSDEDPDDDLD 373
SSE + I Y D+ D++ EDPDDDLD
Sbjct: 267 ------------------SSEKQQALLRPRPGQATSHIFYEPDAYDDL--DQEDPDDDLD 306
Query: 374 I 374
I
Sbjct: 307 I 307
>gb|EAK87240.1| hypothetical protein UM06383.1 [Ustilago maydis 521]
gi|49081110|ref|XP_403998.1| hypothetical protein
UM06383.1 [Ustilago maydis 521]
Length = 1327
Score = 40.0 bits (92), Expect = 0.12
Identities = 28/102 (27%), Positives = 46/102 (44%), Gaps = 21/102 (20%)
Query: 273 SVSSADGATVAGLLPKVQFNLQLSEKEKTDRAKVVLPFEHQGTGRPIQIYDGRRSLDDNS 332
S + + GA + ++ + FNL + ++ R V LP+ + N+
Sbjct: 1247 SAACSGGAAHSSMISTLPFNLSETVDQRQRRETVALPYAYH----------------QNA 1290
Query: 333 SEAAPISSGKKENSEMGEIIYFRDSDDEMPDSDEDPDDDLDI 374
+A G N++ I+F DD+ D DEDPDDDLD+
Sbjct: 1291 QQAERALRGTTGNAK----IFFEPEDDDDED-DEDPDDDLDL 1327
>ref|NP_981960.1| S-phase 2 protein [Homo sapiens] gi|44662826|ref|NP_981959.1|
S-phase 2 protein [Homo sapiens]
gi|44662830|ref|NP_056177.3| S-phase 2 protein [Homo
sapiens]
Length = 316
Score = 39.7 bits (91), Expect = 0.15
Identities = 57/241 (23%), Positives = 87/241 (35%), Gaps = 69/241 (28%)
Query: 158 VAIDSLSELLRHASLQSVAGLLSNLRSHDQIS---------SIFGLLHSDLHEERAAAVL 208
+A+DSLS LL ++ +L + D S+ GLLH +LH L
Sbjct: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180
Query: 209 EYMSSMVASVAPLHHSAERGNLENSLSEQNFTKGRLNVRFKRRNGRVRVTCE-------- 260
++ ++ T G+ + R R R T +
Sbjct: 181 SSLAQTEVTLGG-------------------TMGQASAHILCRRPRQRPTDQTQWFSILP 221
Query: 261 EFKVEAG-GISLTSVSSADGATVAGLLPKVQ------FNLQLSEKEKTDRAKVVLPFEHQ 313
+F ++ G S+ S +D +P V FNL LS+KE+ R ++LPF+
Sbjct: 222 DFSLDLQEGPSVESQPYSDPH-----IPPVDPTTHLTFNLHLSKKEREARDSLILPFQF- 275
Query: 314 GTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFRDSDDEMPDSDEDPDDDLD 373
SSE + I Y D+ D++ EDPDDDLD
Sbjct: 276 ------------------SSEKQQALLRPRPGQATSHIFYEPDAYDDL--DQEDPDDDLD 315
Query: 374 I 374
I
Sbjct: 316 I 316
>dbj|BAB87800.1| dermal papilla derived protein 6 (DERP6) [Homo sapiens]
Length = 316
Score = 39.7 bits (91), Expect = 0.15
Identities = 57/241 (23%), Positives = 87/241 (35%), Gaps = 69/241 (28%)
Query: 158 VAIDSLSELLRHASLQSVAGLLSNLRSHDQIS---------SIFGLLHSDLHEERAAAVL 208
+A+DSLS LL ++ +L + D S+ GLLH +LH L
Sbjct: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180
Query: 209 EYMSSMVASVAPLHHSAERGNLENSLSEQNFTKGRLNVRFKRRNGRVRVTCE-------- 260
++ ++ T G+ + R R R T +
Sbjct: 181 SSLAQTEVTLGG-------------------TMGQASAHILCRRPRQRPTDQTQWFSILP 221
Query: 261 EFKVEAG-GISLTSVSSADGATVAGLLPKVQ------FNLQLSEKEKTDRAKVVLPFEHQ 313
+F ++ G S+ S +D +P V FNL LS+KE+ R ++LPF+
Sbjct: 222 DFSLDLQEGPSVESQPYSDPH-----IPPVDPTTHLTFNLHLSKKEREARDSLILPFQF- 275
Query: 314 GTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFRDSDDEMPDSDEDPDDDLD 373
SSE + I Y D+ D++ EDPDDDLD
Sbjct: 276 ------------------SSEKQQALLRPRPGQATSHIFYEPDAYDDL--DQEDPDDDLD 315
Query: 374 I 374
I
Sbjct: 316 I 316
>emb|CAG62907.1| unnamed protein product [Candida glabrata CBS138]
gi|50295032|ref|XP_449927.1| unnamed protein product
[Candida glabrata]
Length = 307
Score = 39.3 bits (90), Expect = 0.20
Identities = 54/238 (22%), Positives = 91/238 (37%), Gaps = 61/238 (25%)
Query: 155 RFCVAIDSLSELLRHASLQSVAGLLSNLRSHDQISSIFGLLHSDLHEE----------RA 204
R + IDSL+ + R A L G ++ + +I LH D+H+ A
Sbjct: 106 RNVIVIDSLNHVPR-AQLTKFIGSIATPHA-----TILATLHRDMHDSPYEHGLDNYPSA 159
Query: 205 AAVLEYMSSMVASVAPLHHSAERGNLENSLSEQNFTKG------RLNVRFKRRNGRVRVT 258
+L +M++ V P ++ L LS+ +G ++++ +KR++GR
Sbjct: 160 IELLHFMATTSLDVTPASTISDDDELNQQLSKLQIPRGLNNTTFKVSLTYKRKSGRELTY 219
Query: 259 CEEFKVEAGGISLTSVSSADGA------TVAGLLPKVQFNLQLSEKEKTDRAKVVLPFEH 312
+FKV+ + T L FNL S K+K + +V LPF
Sbjct: 220 --DFKVDYNTHQYYQIMDKKDVDENALETPEMLQGLTTFNLSTSAKQKAAKDQVELPF-- 275
Query: 313 QGTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFRDSDDEMPDSD--EDP 368
EA +++G G I+Y + DD+ + D EDP
Sbjct: 276 --------------------LEAQSLTAG-------GAIVYEYEKDDDYDEEDPYEDP 306
>emb|CAA22665.1| SPBC18E5.05c [Schizosaccharomyces pombe]
gi|19112643|ref|NP_595851.1| hypothetical protein
SPBC18E5.05c [Schizosaccharomyces pombe 972h-]
gi|7491445|pir||T39756 hypothetical protein SPBC18E5.05c
- fission yeast (Schizosaccharomyces pombe)
Length = 314
Score = 38.5 bits (88), Expect = 0.34
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 24/85 (28%)
Query: 289 VQFNLQLSEKEKTDRAKVVLP-FEHQGTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSE 347
V FNL +SEKE+ +R KV LP F Q G S K +
Sbjct: 251 VSFNLNVSEKERKERDKVFLPYFSAQMVG----------------------SQHKSSFVD 288
Query: 348 MGEIIYFRDSDDEMPDSDEDPDDDL 372
G IIY D D+ D +ED D+DL
Sbjct: 289 EGTIIYHADEADDF-DEEEDADEDL 312
>emb|CAH56280.1| hypothetical protein [Homo sapiens]
Length = 175
Score = 38.1 bits (87), Expect = 0.44
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 21/84 (25%)
Query: 291 FNLQLSEKEKTDRAKVVLPFEHQGTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSEMGE 350
FNL LS+KE+ R ++LPF+ SSE +
Sbjct: 113 FNLHLSKKEREARDSLILPFQF-------------------SSEKQQALLRPRPGQATSH 153
Query: 351 IIYFRDSDDEMPDSDEDPDDDLDI 374
I Y D+ D++ EDPDDDLDI
Sbjct: 154 IFYEPDAYDDL--DQEDPDDDLDI 175
>ref|NP_061210.1| S-phase 2 protein [Mus musculus] gi|2183323|gb|AAC16252.1| unknown
[Mus musculus]
Length = 300
Score = 37.7 bits (86), Expect = 0.57
Identities = 55/234 (23%), Positives = 86/234 (36%), Gaps = 55/234 (23%)
Query: 158 VAIDSLSELLRHASLQSVAGLLSNLRSHD---------QISSIFGLLHSDLHEERAAAVL 208
+A+DSLS LL H ++ L L + + + GLLH +LH + L
Sbjct: 105 IALDSLSWLLCHIPCVTLCQALHALSQQNGDPGDNSLVEQVHVLGLLHEELHGPGSMGAL 164
Query: 209 EYMSSMVASVAPLHHSAERGNLENSLSEQNFTKGRLNVRFKRRNGRVRVTCEEFKVEAG- 267
++ +++ G ++ + + ++ +R R F V
Sbjct: 165 NTLAHTEVTLS--------GKVDQTSA---------SILCRRPQQRATYQTWWFSVLPDF 207
Query: 268 ------GISLTSVSSADGATV-AGLLPKVQFNLQLSEKEKTDRAKVVLPFEHQGTGRPIQ 320
G+ L S D T + FNL LS+KE+ R + LPF+
Sbjct: 208 SLTLHEGLPLRSELHPDHHTTQVDPTAHLTFNLHLSKKEREARDSLTLPFQF-------- 259
Query: 321 IYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFRDSDDEMPDSDEDPDDDLDI 374
SSE + G I Y D+ D++ EDPDDDLDI
Sbjct: 260 -----------SSEKQKALLHPVPSRTTGRIFYEPDAFDDV--DQEDPDDDLDI 300
>emb|CAG90984.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50427723|ref|XP_462474.1| unnamed protein product
[Debaryomyces hansenii]
Length = 298
Score = 37.7 bits (86), Expect = 0.57
Identities = 70/324 (21%), Positives = 128/324 (38%), Gaps = 69/324 (21%)
Query: 44 LSSHLIASKSHSQFRSGIVIVALSRTPSSYAALFKTKGIHISSSNNNWIHILDCYTDPLG 103
L + L++ K +S F ++V S SSY L + SNN I+I
Sbjct: 9 LLNRLLSLKENSPF----ILVLDSLIQSSYNIL---REFAYKCSNNKIIYI--------- 52
Query: 104 WKEKPRKSQNVTNPSHQVSLATTSYKTVKDLDK-LFSVITELGRGLIGENKARFCVAIDS 162
+ + PS S S ++ K + S I E+G ++ V +DS
Sbjct: 53 ------SFETLNKPSFASSFIQCSGLPAAEVSKKIKSEILEVGE----TTSSKCLVIVDS 102
Query: 163 LSELLRHASLQSVAG-LLSNLRSHDQISSIFGLLHSDLHEERAA--------AVLEYMSS 213
L+ + ++ +L N+ S+ G+ H++L + ++ ++L Y++S
Sbjct: 103 LNYIANDELAHFISSTILPNI-------SLVGVFHTNLPQPHSSVMNYPSSLSLLSYIAS 155
Query: 214 MVASVAPLHHSA-ERGNLENSLSEQNF--------TKGRLNVRFKRRNGRVRVTCEEFKV 264
+ + P + + L+N +S F T +L + +R++GR + ++
Sbjct: 156 SIFEIEPFYQDKIDEETLDNKISRLRFPINCSLNSTTYKLTLTNRRKSGRSLI----YQF 211
Query: 265 EAGGISLT-------SVSSADGATVAGLLPKVQFNLQLSEKEKTDRAKVVLPF----EHQ 313
I+ T + D + L FNL S K+K R +V LPF E
Sbjct: 212 MVNSITHTYDVFKEAKEEAIDPEDESMLKDLTTFNLTTSSKQKLAREQVELPFMEAQEAM 271
Query: 314 GTGRPIQIYDGRRSLDDNSSEAAP 337
G+ +Y+ + DD+ E P
Sbjct: 272 GSSGGAIVYEFEK--DDDYDEEDP 293
>emb|CAI35160.1| retinoic acid induced 12 [Mus musculus] gi|13277702|gb|AAH03752.1|
S-phase 2 protein [Mus musculus]
Length = 300
Score = 37.4 bits (85), Expect = 0.75
Identities = 55/234 (23%), Positives = 86/234 (36%), Gaps = 55/234 (23%)
Query: 158 VAIDSLSELLRHASLQSVAGLLSNLRSHD---------QISSIFGLLHSDLHEERAAAVL 208
+A+DSLS LL H ++ L L + + + GLLH +LH + L
Sbjct: 105 IALDSLSWLLCHIPCVTLCQALHALSQQNGDPGDNSLVEQVRVLGLLHEELHGPGSMGAL 164
Query: 209 EYMSSMVASVAPLHHSAERGNLENSLSEQNFTKGRLNVRFKRRNGRVRVTCEEFKVEAG- 267
++ +++ G ++ + + ++ +R R F V
Sbjct: 165 NTLAHTEVTLS--------GKVDQTSA---------SILCRRPQQRATYQTWWFSVLPDF 207
Query: 268 ------GISLTSVSSADGATV-AGLLPKVQFNLQLSEKEKTDRAKVVLPFEHQGTGRPIQ 320
G+ L S D T + FNL LS+KE+ R + LPF+
Sbjct: 208 SLTLHEGLPLRSELHPDHHTTQVDPTAHLTFNLHLSKKEREARDSLTLPFQF-------- 259
Query: 321 IYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFRDSDDEMPDSDEDPDDDLDI 374
SSE + G I Y D+ D++ EDPDDDLDI
Sbjct: 260 -----------SSEKQKALLHPVPSRTTGHIFYEPDAFDDV--DPEDPDDDLDI 300
>emb|CAG00709.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 37.4 bits (85), Expect = 0.75
Identities = 26/84 (30%), Positives = 40/84 (46%), Gaps = 23/84 (27%)
Query: 291 FNLQLSEKEKTDRAKVVLPFEHQGTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSEMGE 350
FNL+LS+ E + K+ LPF + + A + SG G+
Sbjct: 39 FNLRLSDSELEAKEKLALPF-----------------VFSKEKKTALLCSGPGS----GQ 77
Query: 351 IIYFRDSDDEMPDSDEDPDDDLDI 374
I+Y D++D+ +EDPDDDLD+
Sbjct: 78 ILYEPDANDDY--DEEDPDDDLDV 99
>dbj|BAB28944.1| unnamed protein product [Mus musculus]
Length = 277
Score = 37.4 bits (85), Expect = 0.75
Identities = 55/234 (23%), Positives = 86/234 (36%), Gaps = 55/234 (23%)
Query: 158 VAIDSLSELLRHASLQSVAGLLSNLRSHD---------QISSIFGLLHSDLHEERAAAVL 208
+A+DSLS LL H ++ L L + + + GLLH +LH + L
Sbjct: 82 IALDSLSWLLCHIPCVTLCQALHALSQQNGDPGDNSLVEQVRVLGLLHEELHGPGSMGAL 141
Query: 209 EYMSSMVASVAPLHHSAERGNLENSLSEQNFTKGRLNVRFKRRNGRVRVTCEEFKVEAG- 267
++ +++ G ++ + + ++ +R R F V
Sbjct: 142 NTLAHTEVTLS--------GKVDQTSA---------SILCRRPQQRATYQTWWFSVLPDF 184
Query: 268 ------GISLTSVSSADGATV-AGLLPKVQFNLQLSEKEKTDRAKVVLPFEHQGTGRPIQ 320
G+ L S D T + FNL LS+KE+ R + LPF+
Sbjct: 185 SLTLHEGLPLRSELHPDHHTTQVDPTAHLTFNLHLSKKEREARDSLTLPFQF-------- 236
Query: 321 IYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFRDSDDEMPDSDEDPDDDLDI 374
SSE + G I Y D+ D++ EDPDDDLDI
Sbjct: 237 -----------SSEKQKALLHPVPSRTTGHIFYEPDAFDDV--DPEDPDDDLDI 277
>ref|XP_314123.2| ENSANGP00000022479 [Anopheles gambiae str. PEST]
gi|55240609|gb|EAA44543.2| ENSANGP00000022479 [Anopheles
gambiae str. PEST]
Length = 223
Score = 37.0 bits (84), Expect = 0.98
Identities = 27/131 (20%), Positives = 57/131 (42%), Gaps = 4/131 (3%)
Query: 247 RFKRRNGRVRVTCEEFKVEAGGISLTSVSSA----DGATVAGLLPKVQFNLQLSEKEKTD 302
R K+R + EE K + + V++ D A + + Q QL +K KT
Sbjct: 47 RLKKREMLKQKQKEEKKTKKATKNAAKVAAVPNTFDPAEIFNIEKSRQKYQQLGQKSKTP 106
Query: 303 RAKVVLPFEHQGTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFRDSDDEMP 362
+ ++ + ++D +D++ +AA + + S+M + + +S+DE
Sbjct: 107 QPVATNGHQNGSAKKGRNLFDSDNEMDEDEQKAATGKKVQVKKSQMKKFLQRAESEDESD 166
Query: 363 DSDEDPDDDLD 373
+E+ D D++
Sbjct: 167 SEEEEMDSDVE 177
>ref|NP_198440.1| 3'-5' exonuclease domain-containing protein / helicase and RNase D
C-terminal domain-containing protein / HRDC
domain-containing protein [Arabidopsis thaliana]
Length = 838
Score = 37.0 bits (84), Expect = 0.98
Identities = 19/53 (35%), Positives = 31/53 (57%), Gaps = 7/53 (13%)
Query: 323 DGRRSLDDNSSEAAPI-------SSGKKENSEMGEIIYFRDSDDEMPDSDEDP 368
DG + L D+S EA+ I S K +SEMG+II + D++ D++++P
Sbjct: 691 DGVKELKDDSEEASEIVGTSGRVSESKVSSSEMGDIILLENGDEKKVDAEDEP 743
>ref|XP_126724.6| PREDICTED: fetal Alzheimer antigen [Mus musculus]
Length = 3018
Score = 37.0 bits (84), Expect = 0.98
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 321 IYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFRDSDDEMPDSDEDPDDDLD 373
+YD S DD+ E +S +E E G+ +DS+DE D E+ DDD D
Sbjct: 169 VYDDHES-DDDDEEEDMVSEEDEEEEEDGDAEETQDSEDEEEDDMEEDDDDSD 220
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.131 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 597,247,110
Number of Sequences: 2540612
Number of extensions: 23822982
Number of successful extensions: 77694
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 77515
Number of HSP's gapped (non-prelim): 94
length of query: 374
length of database: 863,360,394
effective HSP length: 129
effective length of query: 245
effective length of database: 535,621,446
effective search space: 131227254270
effective search space used: 131227254270
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0346.3