Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0344.11
         (579 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO73528.1| envelope-like protein [Glycine max]                     52  7e-05
gb|AAO73524.1| envelope-like protein [Glycine max]                     52  7e-05
gb|AAO73522.1| envelope-like protein [Glycine max]                     52  7e-05
gb|AAO73530.1| envelope-like protein [Glycine max]                     50  3e-04
gb|AAC24322.1| envelope-like [Glycine max] gi|7488670|pir||T0889...    47  0.002
gb|AAO73526.1| envelope-like protein [Glycine max]                     45  0.005
gb|AAU04774.1| Ulp1 peptidase-like [Cucumis melo] gi|46398240|gb...    42  0.070
dbj|BAD73702.1| EBNA-1-like protein [Oryza sativa (japonica cult...    41  0.092
ref|NP_074052.1| unc-13 homolog A [Rattus norvegicus] gi|5131655...    40  0.16
gb|AAF59236.1| CG10667-PA [Drosophila melanogaster] gi|20151547|...    40  0.20
ref|XP_419834.1| PREDICTED: similar to KIAA1315 protein [Gallus ...    40  0.20
gb|AAC47802.1| origin recognition complex subunit 1 [Drosophila ...    40  0.20
dbj|BAC71835.1| putative ATP-dependent RNA helicase [Streptomyce...    38  0.78
emb|CAA65494.1| RAD50 [Saccharomyces cerevisiae] gi|6324079|ref|...    38  1.0
pir||T18216 integrin-like protein alpha chain - yeast (Candida a...    37  1.3
gb|AAP86262.1| Ac2-067 [Rattus norvegicus]                             37  1.3
gb|AAH84174.1| Hypothetical LOC496459 [Xenopus tropicalis] gi|58...    37  1.3
gb|AAB37246.1| calmodulin-binding protein gi|7489107|pir||T03793...    37  1.3
gb|AAU90302.1| hypothetical protein PGEC591C22.18 [Solanum demis...    37  1.7
ref|XP_512051.1| PREDICTED: Rho-associated, coiled-coil containi...    37  2.3

>gb|AAO73528.1| envelope-like protein [Glycine max]
          Length = 680

 Score = 51.6 bits (122), Expect = 7e-05
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 407 PITLDQRLFLDPHVLDIDLPSSRTSVPASMS-ASGTHSVIAELEAISKELQETIRIAAAR 465
           P++L  +LF   HV DI   S  TS  A+ S A    ++IAEL+   K L+ TI+    +
Sbjct: 565 PLSLHYKLFEGTHVPDIVSTSVSTSGKAAASGAVSKDALIAELKDTCKVLEATIKATTEK 624

Query: 466 KIKVDALIQTLKEEAGQEGEHAADAEREGSAENDE 500
           K++++ LI+ L  E+G + E AA+ E E + E +E
Sbjct: 625 KMELELLIKRL-SESGIDDEEAAEEEGEAAEEEEE 658


>gb|AAO73524.1| envelope-like protein [Glycine max]
          Length = 682

 Score = 51.6 bits (122), Expect = 7e-05
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 407 PITLDQRLFLDPHVLDIDLPSSRTSVPASMS-ASGTHSVIAELEAISKELQETIRIAAAR 465
           P++L  +LF   HV DI   S  TS  A+ S A    ++IAEL+   K L+ TI+    +
Sbjct: 567 PLSLHYKLFEGTHVPDIVSTSVSTSGKAAASGAVSKDALIAELKDTCKVLEATIKATTEK 626

Query: 466 KIKVDALIQTLKEEAGQEGEHAADAEREGSAENDE 500
           K++++ LI+ L  E+G + E AA+ E E + E +E
Sbjct: 627 KMELELLIKRL-SESGIDDEEAAEEEGEAAEEEEE 660


>gb|AAO73522.1| envelope-like protein [Glycine max]
          Length = 680

 Score = 51.6 bits (122), Expect = 7e-05
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 407 PITLDQRLFLDPHVLDIDLPSSRTSVPASMS-ASGTHSVIAELEAISKELQETIRIAAAR 465
           P++L  +LF   HV DI   S  TS  A+ S A    ++IAEL+   K L+ TI+    +
Sbjct: 565 PLSLHYKLFEGTHVPDIVSTSVSTSGKAAASGAVSKDALIAELKDTCKVLEATIKATTEK 624

Query: 466 KIKVDALIQTLKEEAGQEGEHAADAEREGSAENDE 500
           K++++ LI+ L  E+G + E AA+ E E + E +E
Sbjct: 625 KMELELLIKRL-SESGIDDEEAAEEEGEAAEEEEE 658


>gb|AAO73530.1| envelope-like protein [Glycine max]
          Length = 685

 Score = 49.7 bits (117), Expect = 3e-04
 Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 9/100 (9%)

Query: 407 PITLDQRLFLDPHVLDIDLPSSRTSVPASMSASGTHSVIAELEAISKELQETIRIAAARK 466
           P++L  +LF   HV DI   S + +   ++S     ++IAEL+   K L+ TI+    +K
Sbjct: 573 PLSLHYKLFEGTHVPDIVSTSGKAAASGAVSKD---ALIAELKDTCKVLEATIKATTEKK 629

Query: 467 IKVDALIQTLKE------EAGQEGEHAADAEREGSAENDE 500
           ++++ LI+ L +      EA +E E AA+ E E + E ++
Sbjct: 630 MELERLIKRLSDSGIDDGEAAEEEEEAAEEEEEAAEEEED 669


>gb|AAC24322.1| envelope-like [Glycine max] gi|7488670|pir||T08898 envelope-like -
           soybean (fragment)
          Length = 648

 Score = 46.6 bits (109), Expect = 0.002
 Identities = 29/104 (27%), Positives = 56/104 (52%), Gaps = 9/104 (8%)

Query: 408 ITLDQRLFLDPHVLDIDLPSSRTSVPASMSASGTHSVIAELEAISKELQETIRIAAARKI 467
           ++L  +LF   HV DI   S + +   ++S     ++IAEL+   K L+ TI+    +K+
Sbjct: 544 LSLHYKLFEGTHVPDIVSTSGKAAASGAVSKD---ALIAELKDTCKVLEATIKATTEKKM 600

Query: 468 KVDALIQTLKE------EAGQEGEHAADAEREGSAENDEEHSSS 505
           +++ LI+ L +      EA +E E AA+ E++ + + + +   S
Sbjct: 601 ELERLIKRLSDSGIDDGEAAEEEEEAAEEEKDAAEDTESDDDDS 644


>gb|AAO73526.1| envelope-like protein [Glycine max]
          Length = 656

 Score = 45.4 bits (106), Expect = 0.005
 Identities = 29/106 (27%), Positives = 52/106 (48%), Gaps = 3/106 (2%)

Query: 401 VKPIGPPITLDQRLFLDPHVLDIDLPSSRTSVPASMSASGTHSVIAELEAISKELQETIR 460
           VK     ++L  +LF   HV DI   S + +   +++     ++IAEL+   K L+ TI+
Sbjct: 545 VKKRESALSLHYKLFEGTHVPDIVSTSGKAAASGAVTKD---ALIAELKDTCKVLEATIK 601

Query: 461 IAAARKIKVDALIQTLKEEAGQEGEHAADAEREGSAENDEEHSSSS 506
               +K++++ LI+ L +    +GE A + E     E D    + S
Sbjct: 602 ATTEKKMELERLIKRLSDSGIDDGEAAEEEEEAAEEEEDAAEDTES 647


>gb|AAU04774.1| Ulp1 peptidase-like [Cucumis melo] gi|46398240|gb|AAS91798.1|
           Ulp1-like peptidase [Cucumis melo]
          Length = 423

 Score = 41.6 bits (96), Expect = 0.070
 Identities = 24/87 (27%), Positives = 39/87 (44%)

Query: 243 DWLHPYAQLKYIYVPINAGYDHYYLMVIALSERRVYHFDSFPDEDTSFYKQFFMRQIRKM 302
           D+  P+A + Y+Y P N   +H+ L+ + L   +V  +DS P   T+      +  IR++
Sbjct: 276 DFQDPWASVDYVYSPFNVHGNHWVLLCLDLVSCQVKVWDSLPSLTTAEEMTNILLPIRQL 335

Query: 303 IQDLLALDKFSSMESNGKVDLENWEVV 329
           +  LL    F           E W VV
Sbjct: 336 VPKLLDSTGFFDRRGRSSTYKEPWPVV 362


>dbj|BAD73702.1| EBNA-1-like protein [Oryza sativa (japonica cultivar-group)]
           gi|56202058|dbj|BAD73587.1| EBNA-1-like protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 613

 Score = 41.2 bits (95), Expect = 0.092
 Identities = 17/44 (38%), Positives = 28/44 (63%)

Query: 249 AQLKYIYVPINAGYDHYYLMVIALSERRVYHFDSFPDEDTSFYK 292
           AQ + I++PIN   +H+YL V+ + +R++   DS P    SFY+
Sbjct: 515 AQNEQIFIPINRNKNHWYLAVVHVKQRQIQLLDSSPSTGLSFYR 558


>ref|NP_074052.1| unc-13 homolog A [Rattus norvegicus]
           gi|51316551|sp|Q62768|UN13A_RAT Unc-13 homolog A
           (Munc13-1) gi|915328|gb|AAC52266.1| Munc13-1
          Length = 1735

 Score = 40.4 bits (93), Expect = 0.16
 Identities = 29/127 (22%), Positives = 60/127 (46%), Gaps = 13/127 (10%)

Query: 28  EDFDTTLKEI-ATKVDE---LDLAQGCTSKANIHTDSPKWRLDDYNIFVIDSSDDEDVPR 83
           EDFD     +  +++D+    D    C S  + H DSP+W  D+ ++  ++  +DE++P 
Sbjct: 277 EDFDPDEHSLQGSELDDERDRDSYHSCHSSVSYHKDSPRWDQDEEDLEDLEDLEDEELPE 336

Query: 84  TATHLQKQVKTEVLERQHELITPQGKSFLQFEQNKVFGSGKDSYQRAPKKSMEDSLARKR 143
                +++++ E LE + EL   +    L+ E+ +       SY +    ++ +    KR
Sbjct: 337 -----EEELEEEELEEEEELEEEE----LELEEEEEVPDDLASYTQQEDTTVAEPKEFKR 387

Query: 144 LPYTPEA 150
           + +   A
Sbjct: 388 ISFPTAA 394


>gb|AAF59236.1| CG10667-PA [Drosophila melanogaster] gi|20151547|gb|AAM11133.1|
           LD11626p [Drosophila melanogaster]
           gi|17137456|ref|NP_477303.1| CG10667-PA [Drosophila
           melanogaster] gi|13124778|sp|O16810|ORC1_DROME Origin
           recognition complex subunit 1 (DmORC1)
          Length = 924

 Score = 40.0 bits (92), Expect = 0.20
 Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 19/126 (15%)

Query: 79  EDVPRTATHLQKQVKTEVLERQHELITP-QGKSFLQFEQNKVFGSGKDSYQRAPKKSMED 137
           E  PR + HL   V+  V E    + TP +G+S    + N    S K S Q+ P ++   
Sbjct: 437 EGTPRRSIHLSNIVEQRVFEDDEIISTPKRGRSKKTVQDNDEDYSPKKSVQKTPTRTRRS 496

Query: 138 SLARK-------------RLPYTPEAKRPK-----LEPNLQSHKLIKTKFKPSEDMKLTP 179
           S   K               P TP  K  K     L P++Q    +  K     +++L  
Sbjct: 497 STTTKTATTPSKGITTATATPMTPSQKMKKIRAGELSPSMQQRTDLPAKDSSKSELQLAR 556

Query: 180 TQLHLA 185
            QLH++
Sbjct: 557 EQLHVS 562


>ref|XP_419834.1| PREDICTED: similar to KIAA1315 protein [Gallus gallus]
          Length = 2370

 Score = 40.0 bits (92), Expect = 0.20
 Identities = 64/269 (23%), Positives = 100/269 (36%), Gaps = 35/269 (13%)

Query: 291  YKQFFMRQIRKMIQDLLALDKFSSMESNGKVDLENWEVVELTVDGG---ESYMYNSPIWV 347
            ++QF       +  DLL   + S++  N   D +  E+ +  + G    E    N     
Sbjct: 1376 FQQFRDANKSDLSYDLLTEQQASTLTFNLVSDAQMGEIFKSLLQGSDLLEKSGSNIDRHD 1435

Query: 348  MEWLSMGSSFHQNAKTKLNERASRMKIAVNLVGGVHNECWKELEGKVDKFWNMVKPI-GP 406
             E+ +    F  N K K N      +IA         E   E     D  W +V PI  P
Sbjct: 1436 WEFRTPEKQFSDNHKCKTNTSELVQRIAPK-------EVHVESRSVEDISWAVVSPIRAP 1488

Query: 407  PITLDQRLFLDPHVLD----IDLPSSRTSV-----PASMSASGTHSVIAELEAISKELQE 457
             +T   ++ +DP VLD     ++P+  TS          S S   S++ E  A+S  +  
Sbjct: 1489 SLTSRLQMSVDPDVLDESCMFEVPTGATSCREDECSLQKSKSFVSSILLEDLAVSLTIPS 1548

Query: 458  TIRIAA----------ARKIKVDALIQTLKEEAGQEGEHAADAEREGSAENDEEHSSSSV 507
             ++  A          +       L     E+A  EGE A + +   + E+D   S SS 
Sbjct: 1549 PLKSDAHLSFLKSENNSSSTPECVLSAHYSEDALLEGEDATEQDIHLALESDNSSSRSSC 1608

Query: 508  CSFVKTRPVQEIFYVQVFKCYKLASVQVV 536
             S   +RPV     +  F C     +Q V
Sbjct: 1609 SSSWTSRPV-----IPGFPCRSSLPMQAV 1632


>gb|AAC47802.1| origin recognition complex subunit 1 [Drosophila melanogaster]
          Length = 924

 Score = 40.0 bits (92), Expect = 0.20
 Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 19/126 (15%)

Query: 79  EDVPRTATHLQKQVKTEVLERQHELITP-QGKSFLQFEQNKVFGSGKDSYQRAPKKSMED 137
           E  PR + HL   V+  V E    + TP +G+S    + N    S K S Q+ P ++   
Sbjct: 437 EGTPRRSIHLSNIVEQRVFEDDEIISTPKRGRSKKTVQDNDEDYSPKKSVQKTPTRTRRS 496

Query: 138 SLARK-------------RLPYTPEAKRPK-----LEPNLQSHKLIKTKFKPSEDMKLTP 179
           S   K               P TP  K  K     L P++Q    +  K     +++L  
Sbjct: 497 STTTKTATTPSKGITTATATPMTPSQKMKKIRAGELSPSMQQRTDLPAKDSSKSELQLAR 556

Query: 180 TQLHLA 185
            QLH++
Sbjct: 557 EQLHVS 562


>dbj|BAC71835.1| putative ATP-dependent RNA helicase [Streptomyces avermitilis
           MA-4680] gi|29830666|ref|NP_825300.1| putative
           ATP-dependent RNA helicase [Streptomyces avermitilis
           MA-4680]
          Length = 747

 Score = 38.1 bits (87), Expect = 0.78
 Identities = 24/81 (29%), Positives = 36/81 (43%)

Query: 417 DPHVLDIDLPSSRTSVPASMSASGTHSVIAELEAISKELQETIRIAAARKIKVDALIQTL 476
           +P V +I    S T V A  +         E+  ++KEL+   R AA  + + D L+   
Sbjct: 426 EPEVAEITGARSMTEVQAQSAGDAAQQAEREVTQLTKELERAQRRAAELRGEADRLVARA 485

Query: 477 KEEAGQEGEHAADAEREGSAE 497
             E G++ E A  A  E  AE
Sbjct: 486 ARERGEDPEAAVAAAAEAVAE 506


>emb|CAA65494.1| RAD50 [Saccharomyces cerevisiae] gi|6324079|ref|NP_014149.1|
           Subunit of MRX complex, with Mre11p and Xrs2p, involved
           in processing double-strand DNA breaks in vegetative
           cells, initiation of meiotic DSBs, telomere maintenance,
           and nonhomologous end joining; Rad50p [Saccharomyces
           cerevisiae] gi|1302293|emb|CAA96157.1| RAD50
           [Saccharomyces cerevisiae] gi|4273|emb|CAA32919.1|
           unnamed protein product [Saccharomyces cerevisiae]
           gi|131782|sp|P12753|RAD50_YEAST DNA repair protein RAD50
           (153 kDa protein)
          Length = 1312

 Score = 37.7 bits (86), Expect = 1.0
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 29/170 (17%)

Query: 27  LEDFDTTLKEIATKVDELDLAQGCTSKANIHTDSPKWRLDDYNIFVIDSSDDEDVPRTA- 85
           LE    TL  I  K+D    +Q C  KA   T + K +LD+  +      D++++  +  
Sbjct: 736 LEKHIITLNSINEKIDN---SQKCLEKAKEETKTSKSKLDELEVDSTKLKDEKELAESEI 792

Query: 86  -------THLQKQVKTEVLERQHELITPQGKSFLQFEQNKVFGSGKDSYQ-----RAPKK 133
                  T+L+K++K   LE   + I+         E+  ++ + +D  Q     R  ++
Sbjct: 793 RPLIEKFTYLEKELKD--LENSSKTIS---------EELSIYNTSEDGIQTVDELRDQQR 841

Query: 134 SMEDSL--ARKRLPYTPEAKRPKLEPNLQSHKLIKTKFKPSEDMKLTPTQ 181
            M DSL   RK +      K  K+  N +   LIK K     +++ + TQ
Sbjct: 842 KMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTVSEIESSLTQ 891


>pir||T18216 integrin-like protein alpha chain - yeast (Candida albicans)
           gi|1144531|gb|AAA96019.1| integrin-like protein alpha
           Int1p gi|1708501|sp|P53705|INT1_CANAL Integrin alpha
           chain-like protein (Alpha-INT1)
          Length = 1664

 Score = 37.4 bits (85), Expect = 1.3
 Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 11/160 (6%)

Query: 19  QNEAMTTKLEDFDTTLKEIATKVDELDLAQGCTSKA-NIHTDSPKWRLDDYNIFVIDSSD 77
           +NEA  + +ED D  LK+     +E D  Q  T  +   H DS  W+L+D N    D  D
Sbjct: 554 ENEA-NSHVEDTDALLKKALNDDEESDTTQNSTKMSIRFHIDS-DWKLEDSNDG--DRED 609

Query: 78  DEDVPRTATHLQKQVKTEVLERQHELITPQGKSFLQFEQNKVFGSGKDSYQRAPKKSMED 137
           ++D+ R     +  +  +V +    +    G S  +     +     D+  +   KS+ED
Sbjct: 610 NDDISRFE---KSDILNDVSQTSDIIGDKYGNSSSEITTKTLAPPRSDNNDKENSKSLED 666

Query: 138 SLARKRLPYTPEAKRPKLEPNLQSHKLIKTKFKPSEDMKL 177
               + L    E    K + ++ ++    +   P E++ L
Sbjct: 667 PANNESLQQQLEVPHTKEDDSILAN---SSNIAPPEELTL 703


>gb|AAP86262.1| Ac2-067 [Rattus norvegicus]
          Length = 253

 Score = 37.4 bits (85), Expect = 1.3
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 427 SSRTSVPASMSASGTHSVIAELEAISKELQETIRIAAARKIKVDALIQTLKEEAGQEGEH 486
           S +  +PA ++ S   S+  +++    E   T      R I+VD L++ LKEE  +E E 
Sbjct: 176 SKKAKMPAVVAKS---SISLDVKPWDDETDMTKLEECVRSIQVDGLLERLKEEEEEEEEE 232

Query: 487 AADAEREGSAENDEEHSSSSV 507
             + E E   E +EE     +
Sbjct: 233 EEEEEEEEEEEEEEEEEEEEL 253


>gb|AAH84174.1| Hypothetical LOC496459 [Xenopus tropicalis]
           gi|58332324|ref|NP_001011049.1| hypothetical LOC496459
           [Xenopus tropicalis]
          Length = 859

 Score = 37.4 bits (85), Expect = 1.3
 Identities = 34/122 (27%), Positives = 54/122 (43%), Gaps = 9/122 (7%)

Query: 65  LDDYNIFVIDSSDDEDV--PRTATHLQKQVKTE------VLERQHELITPQGKSFLQFEQ 116
           L  ++IF   S  +ED   P +    QK  + E      VL RQ + +   GK +L+ E+
Sbjct: 606 LPRHSIFKRRSMREEDFVKPNSKEEAQKLWEKERDKMLQVLNRQQQQMEEDGK-WLKQEE 664

Query: 117 NKVFGSGKDSYQRAPKKSMEDSLARKRLPYTPEAKRPKLEPNLQSHKLIKTKFKPSEDMK 176
             +  + KDS Q+       D+L  K L YT     P+  P L +  L   +  P+ ++ 
Sbjct: 665 KSLANTLKDSKQKTNNNKPPDALPEKELAYTEFTVPPQKPPRLGAQSLQPLQPTPTANID 724

Query: 177 LT 178
            T
Sbjct: 725 RT 726


>gb|AAB37246.1| calmodulin-binding protein gi|7489107|pir||T03793
           calmodulin-binding protein TCB60 - common tobacco
          Length = 551

 Score = 37.4 bits (85), Expect = 1.3
 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 3/62 (4%)

Query: 101 HELITPQGKSFLQFEQNKVFGSGKDSYQRAP---KKSMEDSLARKRLPYTPEAKRPKLEP 157
           ++++   GKSFL  +QN+  GS ++     P     +M + L + RLP + ++++  ++P
Sbjct: 292 NQVVEYDGKSFLNIKQNQKAGSSRNELPVGPVDYPNNMVNQLPQSRLPVSVQSEQSSMDP 351

Query: 158 NL 159
           NL
Sbjct: 352 NL 353


>gb|AAU90302.1| hypothetical protein PGEC591C22.18 [Solanum demissum]
          Length = 987

 Score = 37.0 bits (84), Expect = 1.7
 Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 5/73 (6%)

Query: 231 RKIEEIMDTYSNDWLHPYAQLKYIYVPINAGYD-HYYLMVIALSERRVYHFDSFPDEDTS 289
           R I++I+  +S     P+  +  +Y+P+N G D H+ L V+ L ER +  +DS       
Sbjct: 785 RSIKDIISGFSIPVALPWHLVDEVYIPVNCGEDFHWVLAVVVLKERLIRVYDS----SMV 840

Query: 290 FYKQFFMRQIRKM 302
             K+ + ++I+K+
Sbjct: 841 SRKKVYAKKIKKL 853


>ref|XP_512051.1| PREDICTED: Rho-associated, coiled-coil containing protein kinase 1
           [Pan troglodytes]
          Length = 1363

 Score = 36.6 bits (83), Expect = 2.3
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 20/133 (15%)

Query: 422 DIDLPSSRTSVPASMSASGTHSVIAELEAISKELQETIRIAAARKIKVD-------ALIQ 474
           D+    S T+V    S +     I++LE++++ELQE  RI    K + D       A+++
Sbjct: 561 DLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILE 620

Query: 475 TLKEEAGQEGEHAADAEREGSAENDEEHS-------------SSSVCSFVKTRPVQEIFY 521
             + + G + E   D +     E++ +HS             +  V     T  +QE   
Sbjct: 621 AERRDRGHDSEMIGDLQAMNCPEHNHQHSLVLPSAMVNDSNGNGGVYYMTPTPILQEKNN 680

Query: 522 VQVFKCYKLASVQ 534
           +++   YKL S+Q
Sbjct: 681 LEIDLNYKLKSLQ 693


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.318    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 971,272,582
Number of Sequences: 2540612
Number of extensions: 41099801
Number of successful extensions: 135026
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 134990
Number of HSP's gapped (non-prelim): 58
length of query: 579
length of database: 863,360,394
effective HSP length: 134
effective length of query: 445
effective length of database: 522,918,386
effective search space: 232698681770
effective search space used: 232698681770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)


Lotus: description of TM0344.11