BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0343.7
(342 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA04529.1| Rad51-like protein [Arabidopsis thaliana] gi|184... 600 e-170
dbj|BAB85490.1| Rad51 [Oryza sativa (japonica cultivar-group)] 597 e-169
gb|AAC23700.1| LeRAD51 [Lycopersicon esculentum] gi|7448301|pir|... 596 e-169
gb|AAD32030.1| RAD51 homolog RAD51B [Zea mays] gi|55976630|sp|Q9... 593 e-168
gb|AAD32029.1| RAD51 homolog RAD51A [Zea mays] gi|55976364|sp|Q6... 586 e-166
dbj|BAB85492.1| Rad51 [Oryza sativa (japonica cultivar-group)] g... 578 e-164
emb|CAC82997.1| Rad51B protein [Physcomitrella patens] gi|166055... 523 e-147
emb|CAC82996.1| Rad51A protein [Physcomitrella patens] gi|166055... 521 e-146
gb|AAV38510.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevis... 479 e-134
ref|XP_510313.1| PREDICTED: hypothetical protein XP_510313 [Pan ... 478 e-133
gb|AAX43285.1| RAD51-like [synthetic construct] gi|60829742|gb|A... 478 e-133
ref|NP_001003043.1| Rad51 [Canis familiaris] gi|20387091|dbj|BAB... 476 e-133
emb|CAA69384.1| rad51 [Cricetulus griseus] gi|2500103|sp|P70099|... 476 e-133
dbj|BAA02962.1| HsRad51 [Homo sapiens] 476 e-133
ref|XP_575211.1| PREDICTED: similar to DNA repair protein RAD51 ... 476 e-133
gb|AAH27384.1| RAD51 homolog [Mus musculus] gi|407349|dbj|BAA027... 476 e-133
dbj|BAA78377.1| Rad51 [Cynops pyrrhogaster] 475 e-133
gb|AAV38511.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevis... 474 e-132
ref|NP_990504.1| homolog to S.cerevisiae [Gallus gallus] gi|4799... 474 e-132
emb|CAH69022.1| novel protein (zgc:77754) [Danio rerio] 474 e-132
>emb|CAA04529.1| Rad51-like protein [Arabidopsis thaliana]
gi|18420327|ref|NP_568402.1| DNA repair protein RAD51,
putative [Arabidopsis thaliana]
gi|1706949|gb|AAC49555.1| AtRAD51
gi|1706947|gb|AAB37762.1| RAD51 homolog AtRad51
gi|55976288|sp|P94102|RA51_ARATH DNA repair protein
RAD51 homolog 1 (Rad51-like protein 1) (AtRAD51)
Length = 342
Score = 600 bits (1546), Expect = e-170
Identities = 301/342 (88%), Positives = 324/342 (94%), Gaps = 3/342 (0%)
Query: 1 MEQQRHQKTAQQQPQEEGEEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPR 60
MEQ+R+Q QQQ + EE QHGP P+EQLQA+GIAS+DVKKL+DAG+CTVE VAYTPR
Sbjct: 4 MEQRRNQNAVQQQ---DDEETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPR 60
Query: 61 KDLLQIKGISEAKVDKIVEAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGI 120
KDLLQIKGIS+AKVDKIVEAASKLVP+GFTSAS+LH QR+ IIQIT+GSRELDK+L+GGI
Sbjct: 61 KDLLQIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGI 120
Query: 121 ETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR 180
ETGSITELYGEFRSGKTQLCHTLCVTCQLP+DQGGGEGKAMYIDAEGTFRPQRLLQIADR
Sbjct: 121 ETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADR 180
Query: 181 FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGE 240
FGLNGADVLENVAYARAYNTDHQSRLLLEAASMM+ETRFA++IVDSATALYRTDFSGRGE
Sbjct: 181 FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGE 240
Query: 241 LSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATT 300
LSARQMHLAKFLRSLQKLADEFGVA+VITNQVV+QVDGSA+FAGPQ KPIGGNIMAHATT
Sbjct: 241 LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATT 300
Query: 301 TRLALRKGRGEERICKVISSPCLAEAEARFQILAEGVSDVKD 342
TRLALRKGR EERICKVISSPCL EAEARFQI EGV+D KD
Sbjct: 301 TRLALRKGRAEERICKVISSPCLPEAEARFQISTEGVTDCKD 342
>dbj|BAB85490.1| Rad51 [Oryza sativa (japonica cultivar-group)]
Length = 339
Score = 597 bits (1539), Expect = e-169
Identities = 302/333 (90%), Positives = 322/333 (96%), Gaps = 3/333 (0%)
Query: 10 AQQQPQEEGEEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGI 69
A +Q QEEGE HGP PIEQLQASGIA++DVKKLKD+G+ TVESVAYTPRKDLLQIKGI
Sbjct: 10 AAEQQQEEGE---HGPFPIEQLQASGIAALDVKKLKDSGLYTVESVAYTPRKDLLQIKGI 66
Query: 70 SEAKVDKIVEAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELY 129
SEAKVDKIVEAASKLVP+GFTSAS+LH QR IIQ+TTGSRELDKILDGGIETGSITE+Y
Sbjct: 67 SEAKVDKIVEAASKLVPLGFTSASQLHAQRLEIIQVTTGSRELDKILDGGIETGSITEIY 126
Query: 130 GEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVL 189
GEFRSGKTQLCHTLCVTCQLPLDQGGGEGKA+YIDAEGTFRPQRLLQIADRFGLNGADVL
Sbjct: 127 GEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADRFGLNGADVL 186
Query: 190 ENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLA 249
ENVAYARAYNTDHQSRLLLEAASMM+ETRFA+MIVDSATALYRTDFSGRGELSARQMH+A
Sbjct: 187 ENVAYARAYNTDHQSRLLLEAASMMIETRFALMIVDSATALYRTDFSGRGELSARQMHMA 246
Query: 250 KFLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGR 309
KFLRSLQKLADEFGVA+VITNQVV+QVDGSA+FAGPQ+KPIGGNIMAHA+TTRLALRKGR
Sbjct: 247 KFLRSLQKLADEFGVAVVITNQVVAQVDGSAMFAGPQIKPIGGNIMAHASTTRLALRKGR 306
Query: 310 GEERICKVISSPCLAEAEARFQILAEGVSDVKD 342
GEERICKVISSPCLAEAEARFQI +EGV+DVKD
Sbjct: 307 GEERICKVISSPCLAEAEARFQIASEGVADVKD 339
>gb|AAC23700.1| LeRAD51 [Lycopersicon esculentum] gi|7448301|pir||T06365 RAD51
protein homolog - tomato gi|2500107|sp|Q40134|RA51_LYCES
DNA repair protein RAD51 homolog
Length = 342
Score = 596 bits (1537), Expect = e-169
Identities = 297/342 (86%), Positives = 322/342 (93%)
Query: 1 MEQQRHQKTAQQQPQEEGEEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPR 60
MEQQ + + Q +E E++QHGP P+EQLQASGIA++DVKKLKDAG+CTVESV Y PR
Sbjct: 1 MEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPR 60
Query: 61 KDLLQIKGISEAKVDKIVEAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGI 120
K+LLQIKGISEAKVDKI+EAASKLVP+GFTSAS+LH QR IIQIT+GS+ELDKIL+GGI
Sbjct: 61 KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSKELDKILEGGI 120
Query: 121 ETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR 180
ETGSITE+YGEFR GKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR
Sbjct: 121 ETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR 180
Query: 181 FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGE 240
+GLNG DVLENVAYARAYNTDHQSRLLLEAASMMVETRFA+MIVDSATALYRTDFSGRGE
Sbjct: 181 YGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE 240
Query: 241 LSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATT 300
LSARQMHLAKFLRSLQKLADEFGVA+VITNQVV+QVDGSAVFAGPQ+KPIGGNIMAHA+T
Sbjct: 241 LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAHAST 300
Query: 301 TRLALRKGRGEERICKVISSPCLAEAEARFQILAEGVSDVKD 342
TRLALRKGR EERICKV+SSPCLAEAEARFQI EGV+DVKD
Sbjct: 301 TRLALRKGRAEERICKVVSSPCLAEAEARFQISVEGVTDVKD 342
>gb|AAD32030.1| RAD51 homolog RAD51B [Zea mays] gi|55976630|sp|Q9XED7|R512_MAIZE
DNA repair protein RAD51 homolog B (Rad51-like protein
B) (RAD51B) (ZmRAD51b)
Length = 340
Score = 593 bits (1528), Expect = e-168
Identities = 298/337 (88%), Positives = 322/337 (95%), Gaps = 3/337 (0%)
Query: 6 HQKTAQQQPQEEGEEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQ 65
HQK + P E E +HGP PIEQLQASGIA++DVKKLKDAG+CTVESVAY+PRKDLLQ
Sbjct: 7 HQKAS---PPIEEEATEHGPFPIEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQ 63
Query: 66 IKGISEAKVDKIVEAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSI 125
IKGISEAKVDKI+EAASKLVP+GFTSAS+LH QR IIQ+TTGSRELD+ILDGGIETGSI
Sbjct: 64 IKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQLTTGSRELDQILDGGIETGSI 123
Query: 126 TELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNG 185
TE+YGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKA+YIDAEGTFRPQR+LQIADRFGLNG
Sbjct: 124 TEMYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRILQIADRFGLNG 183
Query: 186 ADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQ 245
ADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA+M+VDSATALYRTDFSGRGELSARQ
Sbjct: 184 ADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMVVDSATALYRTDFSGRGELSARQ 243
Query: 246 MHLAKFLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLAL 305
MHLAKFLRSLQKLADEFGVA+VITNQVV+QVDG+A+FAGPQ+KPIGGNIMAHA+TTRL L
Sbjct: 244 MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGAAMFAGPQIKPIGGNIMAHASTTRLFL 303
Query: 306 RKGRGEERICKVISSPCLAEAEARFQILAEGVSDVKD 342
RKGRGEERICKVISSPCLAEAEARFQI +EGV+DVKD
Sbjct: 304 RKGRGEERICKVISSPCLAEAEARFQISSEGVTDVKD 340
>gb|AAD32029.1| RAD51 homolog RAD51A [Zea mays] gi|55976364|sp|Q67EU8|R511_MAIZE
DNA repair protein RAD51 homolog A (Rad51-like protein
A) (RAD51A) (ZmRAD51a)
Length = 340
Score = 586 bits (1510), Expect = e-166
Identities = 293/336 (87%), Positives = 321/336 (95%), Gaps = 3/336 (0%)
Query: 10 AQQQPQE---EGEEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQI 66
AQQQ + E EE++HGP PIEQLQASGIA++DVKKLKD+G+ TVE+VAYTPRKDLLQI
Sbjct: 5 AQQQQKAAAAEQEEVEHGPFPIEQLQASGIAALDVKKLKDSGLHTVEAVAYTPRKDLLQI 64
Query: 67 KGISEAKVDKIVEAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSIT 126
KGISEAK DKI+EAASK+VP+GFTSAS+LH QR IIQ+TTGSRELDKIL+GGIETGSIT
Sbjct: 65 KGISEAKADKIIEAASKIVPLGFTSASQLHAQRLEIIQVTTGSRELDKILEGGIETGSIT 124
Query: 127 ELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGA 186
E+YGEFRSGKTQLCHT CVTCQLPLDQGGGEGKA+YIDAEGTFRPQRLLQIADRFGLNGA
Sbjct: 125 EIYGEFRSGKTQLCHTPCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADRFGLNGA 184
Query: 187 DVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQM 246
DVLENVAYARAYNTDHQSRLLLEAASMM+ETRFA+M+VDSATALYRTDFSGRGELSARQM
Sbjct: 185 DVLENVAYARAYNTDHQSRLLLEAASMMIETRFALMVVDSATALYRTDFSGRGELSARQM 244
Query: 247 HLAKFLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALR 306
H+AKFLRSLQKLADEFGVA+VITNQVV+QVDGSA+FAGPQ KPIGGNIMAHA+TTRLALR
Sbjct: 245 HMAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAMFAGPQFKPIGGNIMAHASTTRLALR 304
Query: 307 KGRGEERICKVISSPCLAEAEARFQILAEGVSDVKD 342
KGRGEERICKVISSPCLAEAEARFQ+ +EG++DVKD
Sbjct: 305 KGRGEERICKVISSPCLAEAEARFQLASEGIADVKD 340
>dbj|BAB85492.1| Rad51 [Oryza sativa (japonica cultivar-group)]
gi|18874075|dbj|BAB85493.1| Rad51 [Oryza sativa
(japonica cultivar-group)]
Length = 341
Score = 578 bits (1491), Expect = e-164
Identities = 290/321 (90%), Positives = 310/321 (96%), Gaps = 1/321 (0%)
Query: 22 QHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIVEAA 81
+HGP PIEQLQASGIA++DVKKLKDAG+CTVESV Y+PRKDLLQIKGISEAKVDKI+E A
Sbjct: 22 EHGPFPIEQLQASGIAALDVKKLKDAGLCTVESVVYSPRKDLLQIKGISEAKVDKIIEGA 81
Query: 82 SKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCH 141
SKLVP+GFTSAS+LH QR IIQ+TTGSRELDKILDGGIETGSITE+YGEFRSGKTQLCH
Sbjct: 82 SKLVPLGFTSASQLHAQRLEIIQVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCH 141
Query: 142 TLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTD 201
TLCVTCQLPLDQGGGEGKA+YIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTD
Sbjct: 142 TLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTD 201
Query: 202 HQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADE 261
HQSRLLLEAASMMVETRFA+MIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADE
Sbjct: 202 HQSRLLLEAASMMVETRFAIMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADE 261
Query: 262 FGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVISSP 321
FGVA+VITNQVV+QVDG+A+F GPQ+KPIGGNIMAHA+TTRL LRKGR EERICKV+SSP
Sbjct: 262 FGVAVVITNQVVAQVDGAAMF-GPQIKPIGGNIMAHASTTRLFLRKGRAEERICKVVSSP 320
Query: 322 CLAEAEARFQILAEGVSDVKD 342
CLAEAEARFQI EGV+DVKD
Sbjct: 321 CLAEAEARFQISPEGVTDVKD 341
>emb|CAC82997.1| Rad51B protein [Physcomitrella patens] gi|16605548|emb|CAC86604.1|
Rad51B protein [Physcomitrella patens]
Length = 342
Score = 523 bits (1347), Expect = e-147
Identities = 250/324 (77%), Positives = 297/324 (91%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EEI HGP +E LQ+ GI+++D+KKLKDAG CTVE+VAY+ +KDL+ IKG+S+AKVDKI+
Sbjct: 19 EEIHHGPYLVEHLQSCGISALDLKKLKDAGYCTVEAVAYSAKKDLVNIKGLSDAKVDKII 78
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
EAA KLVPMGFTSA ++H QR +IQITTGS+E D IL+GGIETGSITE+YGEFRSGK+Q
Sbjct: 79 EAAGKLVPMGFTSAKQMHEQRAELIQITTGSKEFDSILEGGIETGSITEIYGEFRSGKSQ 138
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTLCVTCQLPLDQGGGEGKA+YIDAEGTFRPQRLLQIA+++GLNG DVL+NVAYARAY
Sbjct: 139 ICHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIAEKYGLNGQDVLDNVAYARAY 198
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL+EAASMM ETRFA+M+VDSATALYRTD+SGRGEL+ARQ HLAKFLR QK+
Sbjct: 199 NTDHQTKLLVEAASMMAETRFALMVVDSATALYRTDYSGRGELAARQFHLAKFLRGCQKM 258
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFG+A+V+TNQVV+QVDGSA+F GPQ KPIGGNI+AHA+TTRL++RKGRGEER+ KV+
Sbjct: 259 ADEFGIAVVVTNQVVAQVDGSAMFNGPQFKPIGGNIIAHASTTRLSVRKGRGEERVIKVV 318
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
+SPCLAE EARFQI EGV DVK+
Sbjct: 319 ASPCLAEQEARFQITNEGVVDVKE 342
>emb|CAC82996.1| Rad51A protein [Physcomitrella patens] gi|16605546|emb|CAC86603.1|
Rad51A protein [Physcomitrella patens]
Length = 342
Score = 521 bits (1342), Expect = e-146
Identities = 250/324 (77%), Positives = 297/324 (91%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE+ HGP +EQLQ GI+S+D+KKLKDAG CTVESVAY+ +KDL+ IKG+S+AKVDKI+
Sbjct: 19 EEVHHGPYLVEQLQNCGISSLDLKKLKDAGFCTVESVAYSAKKDLVLIKGLSDAKVDKII 78
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
EAA+KLVPMGFTSA ++H QR +IQITTG++E D IL+GGIETGSITE+YGEFRSGK+Q
Sbjct: 79 EAATKLVPMGFTSAKQMHEQRAELIQITTGAKEFDNILEGGIETGSITEIYGEFRSGKSQ 138
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTLCVTCQLPLDQGGGEGKA+YIDAEGTFRPQRLLQIA+++GLNG DVL+NVAYARAY
Sbjct: 139 ICHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIAEKYGLNGQDVLDNVAYARAY 198
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ +LL+EAASMM ETRFA+M+VDS+TALYRTD+SGRGEL+ARQ+HLAKFLR QK+
Sbjct: 199 NTDHQMKLLVEAASMMAETRFALMVVDSSTALYRTDYSGRGELAARQVHLAKFLRGCQKI 258
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFG+A+VITNQVV+QVDGSA+F GPQ KPIGGNI+AHA+TTRL++RKGRGEER+ KV+
Sbjct: 259 ADEFGIAVVITNQVVAQVDGSAMFNGPQHKPIGGNIIAHASTTRLSVRKGRGEERVIKVV 318
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
+SPCLAE EARFQI EG DVK+
Sbjct: 319 ASPCLAEQEARFQITNEGAVDVKE 342
>gb|AAV38510.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [synthetic
construct]
Length = 340
Score = 479 bits (1233), Expect = e-134
Identities = 234/324 (72%), Positives = 283/324 (87%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI + DVKKL++AG TVE+VAY P+K+L+ IKGISEAK DKI+
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITE++GEFR+GKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTL VTCQLP+DQGGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYARA+
Sbjct: 136 ICHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MMVE+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRGE RICK+
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D KD
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKD 339
>ref|XP_510313.1| PREDICTED: hypothetical protein XP_510313 [Pan troglodytes]
gi|27368250|gb|AAN87149.1| RAD51 homolog (RecA homolog,
E. coli) (S. cerevisiae) [Homo sapiens]
gi|61358913|gb|AAX41640.1| RAD51-like [synthetic
construct] gi|60817856|gb|AAX36441.1| RAD51-like
[synthetic construct] gi|5733658|gb|AAD49705.1| Rad51
[Homo sapiens] gi|19924133|ref|NP_002866.2| RAD51
homolog protein isoform 1 [Homo sapiens]
gi|548663|sp|Q06609|RAD51_HUMAN DNA repair protein RAD51
homolog 1 (hRAD51) (HsRAD51) gi|7767554|gb|AAF69145.1|
RAD51 [Homo sapiens] gi|49168602|emb|CAG38796.1| RAD51
[Homo sapiens] gi|285977|dbj|BAA03189.1| RAD51 [Homo
sapiens]
Length = 339
Score = 478 bits (1229), Expect = e-133
Identities = 233/324 (71%), Positives = 283/324 (86%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI + DVKKL++AG TVE+VAY P+K+L+ IKGISEAK DKI+
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITE++GEFR+GKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYARA+
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MMVE+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRGE RICK+
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D KD
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKD 339
>gb|AAX43285.1| RAD51-like [synthetic construct] gi|60829742|gb|AAX36891.1|
RAD51-like [synthetic construct]
Length = 340
Score = 478 bits (1229), Expect = e-133
Identities = 233/324 (71%), Positives = 283/324 (86%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI + DVKKL++AG TVE+VAY P+K+L+ IKGISEAK DKI+
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITE++GEFR+GKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYARA+
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MMVE+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRGE RICK+
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D KD
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKD 339
>ref|NP_001003043.1| Rad51 [Canis familiaris] gi|20387091|dbj|BAB91246.1| Rad51 [Canis
familiaris]
Length = 339
Score = 476 bits (1225), Expect = e-133
Identities = 232/324 (71%), Positives = 282/324 (86%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI + DVKKL++AG TVE+VAY P+K+L+ IKGISEAK DKI+
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELISIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITE++GEFR+GKTQ
Sbjct: 76 TEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYAR +
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MMVE+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRGE RICK+
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D KD
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKD 339
>emb|CAA69384.1| rad51 [Cricetulus griseus] gi|2500103|sp|P70099|RA51_CRIGR DNA
repair protein RAD51 homolog 1
Length = 339
Score = 476 bits (1225), Expect = e-133
Identities = 232/324 (71%), Positives = 282/324 (86%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI++ DVKKL++AG TVE+VAY P+K+L+ IKGISEAK DKI+
Sbjct: 16 EEESFGPQPISRLEQCGISANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITE++GEFR+GKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYAR +
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MMVE+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+F KPIGGNI+AHA+TTRL LRKGRGE RICKV
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFTADPKKPIGGNIIAHASTTRLYLRKGRGETRICKVY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D KD
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKD 339
>dbj|BAA02962.1| HsRad51 [Homo sapiens]
Length = 339
Score = 476 bits (1225), Expect = e-133
Identities = 232/324 (71%), Positives = 283/324 (86%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI + DVKKL++AG TVE+VAY P+K+L+ IKGISEAK DKI+
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITE++GEFR+GKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYARA+
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MMVE+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRGE RIC++
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICQIY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D KD
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKD 339
>ref|XP_575211.1| PREDICTED: similar to DNA repair protein RAD51 homolog 1 [Rattus
norvegicus]
Length = 339
Score = 476 bits (1224), Expect = e-133
Identities = 232/324 (71%), Positives = 282/324 (86%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI + DVKKL++AG TVE+VAY P+K+L+ IKGISEAK DKI+
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITE++GEFR+GKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYAR +
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MMVE+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRGE RICK+
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D KD
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKD 339
>gb|AAH27384.1| RAD51 homolog [Mus musculus] gi|407349|dbj|BAA02718.1| Rad51
protein [Mus musculus] gi|6755276|ref|NP_035364.1| RAD51
homolog [Mus musculus] gi|585772|sp|Q08297|RAD51_MOUSE
DNA repair protein RAD51 homolog 1
gi|26345412|dbj|BAC36357.1| unnamed protein product [Mus
musculus] gi|397831|dbj|BAA02961.1| MmRad51 [Mus
musculus] gi|12847236|dbj|BAB27489.1| unnamed protein
product [Mus musculus] gi|1093114|prf||2102359A
RAD51-like protein
Length = 339
Score = 476 bits (1224), Expect = e-133
Identities = 232/324 (71%), Positives = 282/324 (86%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI + DVKKL++AG TVE+VAY P+K+L+ IKGISEAK DKI+
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITE++GEFR+GKTQ
Sbjct: 76 TEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYAR +
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MMVE+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRGE RICK+
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D KD
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKD 339
>dbj|BAA78377.1| Rad51 [Cynops pyrrhogaster]
Length = 337
Score = 475 bits (1222), Expect = e-133
Identities = 233/332 (70%), Positives = 283/332 (85%)
Query: 11 QQQPQEEGEEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGIS 70
Q + EE GP PI +L+ GI + DVKKL++AG TVE+VAY P+K+LL IKGIS
Sbjct: 6 QYEASSATEEESLGPQPIARLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELLNIKGIS 65
Query: 71 EAKVDKIVEAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYG 130
EAK DKI+ A+KLVPMGFT+A+E H +R IIQ+TTGS+ELDK+L GGIETGSITE++G
Sbjct: 66 EAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQVTTGSKELDKLLQGGIETGSITEMFG 125
Query: 131 EFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLE 190
EFR+GKTQLCHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+
Sbjct: 126 EFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLD 185
Query: 191 NVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAK 250
NVAYARA+NTDHQ++LL +A++MM E+R+A++IVDSATALYRTD+SGRGELSARQMHLA+
Sbjct: 186 NVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLAR 245
Query: 251 FLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRG 310
FLR L +LADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRG
Sbjct: 246 FLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRG 305
Query: 311 EERICKVISSPCLAEAEARFQILAEGVSDVKD 342
E RICK+ SPCL EAEA F I +GV D KD
Sbjct: 306 ETRICKIYDSPCLPEAEAMFAINPDGVGDAKD 337
>gb|AAV38511.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Homo
sapiens]
Length = 339
Score = 474 bits (1221), Expect = e-132
Identities = 232/324 (71%), Positives = 282/324 (86%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI + DVKKL++AG TVE+VAY P+K+L+ IKGISEAK DKI+
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITE++GEFR+GKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
+CHTL VTCQLP+D+G GEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYARA+
Sbjct: 136 ICHTLAVTCQLPIDRGEGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MMVE+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRGE RICK+
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D KD
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKD 339
>ref|NP_990504.1| homolog to S.cerevisiae [Gallus gallus] gi|479915|pir||S35642 RAD51
protein homolog - chicken gi|299819|gb|AAB26354.1|
homolog to S.cerevisiae [Gallus gallus]
gi|585770|sp|P37383|RA51_CHICK DNA repair protein RAD51
homolog
Length = 339
Score = 474 bits (1219), Expect = e-132
Identities = 233/324 (71%), Positives = 281/324 (85%)
Query: 19 EEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIV 78
EE GP PI +L+ GI + DVKKL++AG TVESVA+ P+K+LL IKGISEAK DKI+
Sbjct: 16 EEESFGPEPISRLEQCGINANDVKKLEEAGYHTVESVAHAPKKELLNIKGISEAKADKIL 75
Query: 79 EAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQ 138
A+KLVPMGFT+A+E H +R IIQITTGS+ELDK+L GGIETGSITEL+GEFR+GKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQ 135
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 198
LCHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYAR +
Sbjct: 136 LCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGF 195
Query: 199 NTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
NTDHQ++LL +A++MM E+R+A++IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255
Query: 259 ADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVI 318
ADEFGVA+VITNQVV+QVDG+A+FA KPIGGNI+AHA+TTRL LRKGRGE RICK+
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIY 315
Query: 319 SSPCLAEAEARFQILAEGVSDVKD 342
SPCL EAEA F I A+GV D K+
Sbjct: 316 DSPCLPEAEAMFAINADGVGDAKE 339
>emb|CAH69022.1| novel protein (zgc:77754) [Danio rerio]
Length = 340
Score = 474 bits (1219), Expect = e-132
Identities = 231/327 (70%), Positives = 281/327 (85%)
Query: 16 EEGEEIQHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVD 75
E EE GP P+ +L+ SGI+S D+KKL+D G TVE+VAY P+K+LL IKGISEAK D
Sbjct: 14 EVEEEENFGPQPVSRLEQSGISSSDIKKLEDGGFHTVEAVAYAPKKELLNIKGISEAKAD 73
Query: 76 KIVEAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSG 135
KI+ A+K+VPMGFT+A+E H +R IIQI+TGS+ELDK+L GGIETGSITE++GEFR+G
Sbjct: 74 KILTEAAKMVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTG 133
Query: 136 KTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYA 195
KTQLCHTL VTCQLP+DQGGGEGKAMYID EGTFRP+RLL +A+R+GL G+DVL+NVAYA
Sbjct: 134 KTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLVGSDVLDNVAYA 193
Query: 196 RAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSL 255
RA+NTDHQ++LL +A++MM E+R+A++IVDSATALYRTD+SGRGELSARQ HL +FLR L
Sbjct: 194 RAFNTDHQTQLLYQASAMMTESRYALLIVDSATALYRTDYSGRGELSARQGHLGRFLRML 253
Query: 256 QKLADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERIC 315
+LADEFGVA+VITNQVV+QVDG+A+F+ KPIGGNI+AHA+TTRL LRKGRGE RIC
Sbjct: 254 LRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLYLRKGRGETRIC 313
Query: 316 KVISSPCLAEAEARFQILAEGVSDVKD 342
K+ SPCL EAEA F I A+GV D KD
Sbjct: 314 KIYDSPCLPEAEAMFAINADGVGDAKD 340
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.133 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 516,225,128
Number of Sequences: 2540612
Number of extensions: 20560864
Number of successful extensions: 90233
Number of sequences better than 10.0: 1792
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 1309
Number of HSP's that attempted gapping in prelim test: 89158
Number of HSP's gapped (non-prelim): 1888
length of query: 342
length of database: 863,360,394
effective HSP length: 129
effective length of query: 213
effective length of database: 535,621,446
effective search space: 114087367998
effective search space used: 114087367998
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0343.7