BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0336.3
(230 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB79652.1| predicted protein [Arabidopsis thaliana] gi|2842... 330 2e-89
dbj|BAD73614.1| no apical meristem (NAM) protein-like [Oryza sat... 315 8e-85
ref|NP_916854.1| OJ1125_C04.12 [Oryza sativa (japonica cultivar-... 308 1e-82
ref|NP_564309.1| no apical meristem (NAM) family protein [Arabid... 306 2e-82
gb|AAM63478.1| NAM protein, putative [Arabidopsis thaliana] 306 4e-82
gb|AAT77390.1| unknown protein [Oryza sativa (japonica cultivar-... 303 3e-81
gb|AAF16767.1| F3M18.9 [Arabidopsis thaliana] 298 6e-80
emb|CAB79681.1| putative protein [Arabidopsis thaliana] gi|15233... 285 5e-76
dbj|BAD72224.1| unknown protein [Oryza sativa (japonica cultivar... 275 7e-73
dbj|BAB09880.1| unnamed protein product [Arabidopsis thaliana] g... 260 2e-68
ref|NP_914555.1| P0710E05.22 [Oryza sativa (japonica cultivar-gr... 245 6e-64
gb|AAU10833.1| unknown protein [Oryza sativa (japonica cultivar-... 244 1e-63
gb|AAT38066.1| unknown protein [Oryza sativa (japonica cultivar-... 244 1e-63
ref|XP_466515.1| no apical meristem (NAM)-like protein [Oryza sa... 214 2e-54
gb|AAQ62870.1| At1g25580 [Arabidopsis thaliana] gi|62319881|dbj|... 209 6e-53
pir||C86386 hypothetical protein F2J7.1 - Arabidopsis thaliana g... 209 6e-53
gb|AAG50527.1| unknown protein [Arabidopsis thaliana] 209 6e-53
gb|AAK07611.1| CUC2-like protein [Brassica napus] 201 2e-50
emb|CAB87788.1| putative protein [Arabidopsis thaliana] gi|15241... 171 1e-41
gb|AAF01544.1| hypothetical protein [Arabidopsis thaliana] gi|15... 166 4e-40
>emb|CAB79652.1| predicted protein [Arabidopsis thaliana] gi|2842493|emb|CAA16890.1|
predicted protein [Arabidopsis thaliana]
gi|67633762|gb|AAY78805.1| no apical meristem family
protein [Arabidopsis thaliana]
gi|15235314|ref|NP_194579.1| no apical meristem (NAM)
family protein [Arabidopsis thaliana]
gi|7485897|pir||T04621 hypothetical protein F20O9.190 -
Arabidopsis thaliana
Length = 305
Score = 330 bits (845), Expect = 2e-89
Identities = 160/231 (69%), Positives = 183/231 (78%), Gaps = 7/231 (3%)
Query: 1 MKWCND-SDKEKGNKYLITPTNTPKAIINLTEGIHTIKCPSCSHNTDVRDQGGIH---GL 56
M WCND SD + + + +P + +L H CPSC HN +Q GIH GL
Sbjct: 1 MTWCNDRSDVQTVERIIPSPGAAESPVASLPVSCHKT-CPSCGHNFKFHEQAGIHDLPGL 59
Query: 57 PAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDG 116
PAGVKFDP DQE+LEHLE KV D KLHPLID+FI T+ G+NGICYTHPEKLPGV+KDG
Sbjct: 60 PAGVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDGENGICYTHPEKLPGVNKDG 119
Query: 117 QVRHFFHRPSKAYTTGTRKRRKVHTD-DEGSETRWHKTGKTRAVFAGGGAVKGFKKIMVL 175
VRHFFHRPSKAYTTGTRKRRKVHTD D G ETRWHKTGKTR V A GG V+G+KKI+VL
Sbjct: 120 TVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTRPVLA-GGRVRGYKKILVL 178
Query: 176 YTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCGTSI 226
YTN+G+Q+KPEKTNWVMHQYHLG++EEE++GELVVSKVFYQTQPRQCG S+
Sbjct: 179 YTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVVSKVFYQTQPRQCGGSV 229
>dbj|BAD73614.1| no apical meristem (NAM) protein-like [Oryza sativa (japonica
cultivar-group)] gi|56201848|dbj|BAD73298.1| no apical
meristem (NAM) protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 333
Score = 315 bits (806), Expect = 8e-85
Identities = 154/236 (65%), Positives = 177/236 (74%), Gaps = 14/236 (5%)
Query: 1 MKWCND-SDKEKGNKYLITPTNTPKAIIN-----LTEGIHTIK-CPSCSHNTDVRDQGG- 52
M WCN +D L T A +++ ++ IK CPSC H
Sbjct: 1 MTWCNSFNDVRAVENNLATAAAVAAAKKQQQQQQVSQHVNLIKTCPSCGHRAQYEQAAAA 60
Query: 53 -----IHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPE 107
+ GLPAGVKFDP DQE+LEHLE K D KLHPLID+FIPT++G+NGICYTHPE
Sbjct: 61 ATIQDLPGLPAGVKFDPTDQELLEHLEGKARPDARKLHPLIDEFIPTIEGENGICYTHPE 120
Query: 108 KLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVK 167
+LPGV KDG +RHFFHRPSKAYTTGTRKRRKVHTD++G ETRWHKTGKTR VF GG +K
Sbjct: 121 RLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFT-GGKLK 179
Query: 168 GFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCG 223
G+KKI+VLYTN+G+QRKPEKTNWVMHQYHLGS+EEE+DGELVVSKVFYQTQPRQCG
Sbjct: 180 GYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKDGELVVSKVFYQTQPRQCG 235
>ref|NP_916854.1| OJ1125_C04.12 [Oryza sativa (japonica cultivar-group)]
Length = 340
Score = 308 bits (788), Expect = 1e-82
Identities = 154/243 (63%), Positives = 177/243 (72%), Gaps = 21/243 (8%)
Query: 1 MKWCND-SDKEKGNKYLITPTNTPKAIIN-----LTEGIHTIK-CPSCSHNTDVRDQGG- 52
M WCN +D L T A +++ ++ IK CPSC H
Sbjct: 1 MTWCNSFNDVRAVENNLATAAAVAAAKKQQQQQQVSQHVNLIKTCPSCGHRAQYEQAAAA 60
Query: 53 -----IHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPE 107
+ GLPAGVKFDP DQE+LEHLE K D KLHPLID+FIPT++G+NGICYTHPE
Sbjct: 61 ATIQDLPGLPAGVKFDPTDQELLEHLEGKARPDARKLHPLIDEFIPTIEGENGICYTHPE 120
Query: 108 KLPG-------VSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVF 160
+LPG V KDG +RHFFHRPSKAYTTGTRKRRKVHTD++G ETRWHKTGKTR VF
Sbjct: 121 RLPGTGCSFHGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVF 180
Query: 161 AGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPR 220
GG +KG+KKI+VLYTN+G+QRKPEKTNWVMHQYHLGS+EEE+DGELVVSKVFYQTQPR
Sbjct: 181 TGG-KLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKDGELVVSKVFYQTQPR 239
Query: 221 QCG 223
QCG
Sbjct: 240 QCG 242
>ref|NP_564309.1| no apical meristem (NAM) family protein [Arabidopsis thaliana]
Length = 314
Score = 306 bits (785), Expect = 2e-82
Identities = 153/211 (72%), Positives = 172/211 (81%), Gaps = 9/211 (4%)
Query: 20 TNTPKAIINLTEGIHTIKCPSCSHNTDVR--DQGG----IHGLPAGVKFDPNDQEILEHL 73
T+ P + I+ I T CPSC H DQ G + LPAGVKFDP+D+EIL HL
Sbjct: 37 TSRPDSKISAETPITT--CPSCGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHL 94
Query: 74 EAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGT 133
EAKV SD KLHPLID+FIPTL+G+NGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGT
Sbjct: 95 EAKVSSDKRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGT 154
Query: 134 RKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMH 193
RKRRKV TD+EG ETRWHKTGKTR V + G GFKKI+VLYTN+GRQ+KPEKTNWVMH
Sbjct: 155 RKRRKVSTDEEGHETRWHKTGKTRPVLSQSGET-GFKKILVLYTNYGRQKKPEKTNWVMH 213
Query: 194 QYHLGSNEEEQDGELVVSKVFYQTQPRQCGT 224
QYHLGS+E+E+DGE V+SKVFYQTQPRQCG+
Sbjct: 214 QYHLGSSEDEKDGEPVLSKVFYQTQPRQCGS 244
>gb|AAM63478.1| NAM protein, putative [Arabidopsis thaliana]
Length = 314
Score = 306 bits (783), Expect = 4e-82
Identities = 156/245 (63%), Positives = 179/245 (72%), Gaps = 22/245 (8%)
Query: 1 MKWCNDSDKEKG-NKYLITPTNTPKAIIN--------------LTEGIHTIKCPSCSHNT 45
M WC+ SD N ++ T+ P + ++ CPSC H
Sbjct: 1 MSWCDGSDDNYDLNLERVSNTDHPSVQLKDQSQSCVTSRPDSKISAETPITSCPSCGHKL 60
Query: 46 DVR--DQGG----IHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDN 99
DQ G + LPAGVKFDP+D+EIL HLEAKV SD KLHPLID+FIPTL+G+N
Sbjct: 61 HHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSSDKRKLHPLIDEFIPTLEGEN 120
Query: 100 GICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAV 159
GICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKV TD+EG ETRWHKTGKTR V
Sbjct: 121 GICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVSTDEEGHETRWHKTGKTRPV 180
Query: 160 FAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQP 219
+ G GFKKI+VLYTN+GRQ+KPEKTNWVMHQYHLGS+E+E+DGE V+SKVFYQTQP
Sbjct: 181 LSQSGET-GFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPVLSKVFYQTQP 239
Query: 220 RQCGT 224
RQCG+
Sbjct: 240 RQCGS 244
>gb|AAT77390.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 314
Score = 303 bits (775), Expect = 3e-81
Identities = 151/238 (63%), Positives = 178/238 (74%), Gaps = 17/238 (7%)
Query: 1 MKWCND-SDKEKGNKYLITPTNTPKAIIN----LTEGIHTIKCPSCSHN-------TDVR 48
M WCN SD ++P A + + CPSC H T ++
Sbjct: 1 MTWCNSFSDVRTAVDSSLSPAAAVAAAAGKKAAASLAVLVKMCPSCGHRARYEQETTTIQ 60
Query: 49 DQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEK 108
D + GLPAGVKFDP DQE+LEHLE K D KLHPL+D+FIPT++G+NGICYTHPE+
Sbjct: 61 D---LPGLPAGVKFDPTDQELLEHLEGKARPDSRKLHPLVDEFIPTIEGENGICYTHPER 117
Query: 109 LPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDD-EGSETRWHKTGKTRAVFAGGGAVK 167
LPGVSKDG VRHFFHRPSKAYTTGTRKRRKVH+D+ +G ETRWHKTGKTR V A G +
Sbjct: 118 LPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHSDEVDGGETRWHKTGKTRPVMA-NGRPR 176
Query: 168 GFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCGTS 225
G+KKI+VLYTN+G+QRKPEKTNWVMHQYHLGS+EEE+DGELVVSKVF+QTQPRQCG++
Sbjct: 177 GYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEERDGELVVSKVFFQTQPRQCGST 234
>gb|AAF16767.1| F3M18.9 [Arabidopsis thaliana]
Length = 252
Score = 298 bits (764), Expect = 6e-80
Identities = 140/169 (82%), Positives = 155/169 (90%), Gaps = 1/169 (0%)
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LPAGVKFDP+D+EIL HLEAKV SD KLHPLID+FIPTL+G+NGICYTHPEKLPGVSKD
Sbjct: 15 LPAGVKFDPSDKEILMHLEAKVSSDKRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 74
Query: 116 GQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMVL 175
GQVRHFFHRPSKAYTTGTRKRRKV TD+EG ETRWHKTGKTR V + G GFKKI+VL
Sbjct: 75 GQVRHFFHRPSKAYTTGTRKRRKVSTDEEGHETRWHKTGKTRPVLSQSGET-GFKKILVL 133
Query: 176 YTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCGT 224
YTN+GRQ+KPEKTNWVMHQYHLGS+E+E+DGE V+SKVFYQTQPRQCG+
Sbjct: 134 YTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPVLSKVFYQTQPRQCGS 182
>emb|CAB79681.1| putative protein [Arabidopsis thaliana]
gi|15233497|ref|NP_194652.1| no apical meristem (NAM)
family protein [Arabidopsis thaliana]
gi|7487112|pir||T13434 hypothetical protein T17A13.50 -
Arabidopsis thaliana
Length = 498
Score = 285 bits (730), Expect = 5e-76
Identities = 135/197 (68%), Positives = 158/197 (79%), Gaps = 10/197 (5%)
Query: 37 KCPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQ 96
KCPSC H + + Q + GLPAGVKFDP DQE++EHLEAKV++ K HPLID+FIPT++
Sbjct: 30 KCPSCGHKLEGKPQDWV-GLPAGVKFDPTDQELIEHLEAKVLAKDFKSHPLIDEFIPTIE 88
Query: 97 GDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTD--------DEGSET 148
G++GICYTHPEKLPGV++DG RHFFHRPSKAYTTGTRKRRK+ T+ ET
Sbjct: 89 GEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDNNLQGSSSSGET 148
Query: 149 RWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGEL 208
RWHKTGKTR V G KG KKI+VLYTNFG+ RKPEKTNWVMHQYHLG++EEE++GEL
Sbjct: 149 RWHKTGKTRPVMV-NGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGTHEEEKEGEL 207
Query: 209 VVSKVFYQTQPRQCGTS 225
VVSK+FYQTQPRQC S
Sbjct: 208 VVSKIFYQTQPRQCNWS 224
>dbj|BAD72224.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 433
Score = 275 bits (703), Expect = 7e-73
Identities = 131/190 (68%), Positives = 152/190 (79%), Gaps = 5/190 (2%)
Query: 38 CPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQG 97
CPSC + D + GLPAGVKFDP DQE++EHLEAKV + + HPLID+FIPT++G
Sbjct: 27 CPSCGNKLDCKPDWV--GLPAGVKFDPTDQELIEHLEAKVREEGSRSHPLIDEFIPTIEG 84
Query: 98 DNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHT--DDEGSETRWHKTGK 155
++GICYTHPEKLPGV++DG +HFFHRPSKAYTTGTRKRRK+ T D + ETRWHKTGK
Sbjct: 85 EDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQTECDVQKGETRWHKTGK 144
Query: 156 TRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFY 215
TR V G KG KKI+VLYTNFG+ RKPEKTNWVMHQYHLG EEE++GELVV K+FY
Sbjct: 145 TRPVMV-SGRQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGDLEEEKEGELVVCKIFY 203
Query: 216 QTQPRQCGTS 225
QTQPRQC S
Sbjct: 204 QTQPRQCSWS 213
>dbj|BAB09880.1| unnamed protein product [Arabidopsis thaliana]
gi|15241889|ref|NP_200473.1| no apical meristem (NAM)
family protein [Arabidopsis thaliana]
Length = 386
Score = 260 bits (665), Expect = 2e-68
Identities = 125/196 (63%), Positives = 146/196 (73%), Gaps = 12/196 (6%)
Query: 38 CPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDV-----CKLHPLIDQFI 92
CP C + GLPAGVKFDP DQE++EHLEAKV HPLID+FI
Sbjct: 25 CPGCGRMIQAATKPNWVGLPAGVKFDPTDQELIEHLEAKVKGKEENKKWSSSHPLIDEFI 84
Query: 93 PTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDE------GS 146
PT+ G++GICYTHP+KLPGV++DG +HFFH+PS+AYTTGTRKRRK+ D S
Sbjct: 85 PTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTTGTRKRRKIIQTDHDSELTGSS 144
Query: 147 ETRWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDG 206
ETRWHKTGKTR V G +G KKI+VLYTNFG+ R+PEKTNWVMHQYHLG NEEE++G
Sbjct: 145 ETRWHKTGKTRPVMINGQQ-RGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGINEEEREG 203
Query: 207 ELVVSKVFYQTQPRQC 222
ELVVSK+FYQTQPRQC
Sbjct: 204 ELVVSKIFYQTQPRQC 219
>ref|NP_914555.1| P0710E05.22 [Oryza sativa (japonica cultivar-group)]
Length = 569
Score = 245 bits (626), Expect = 6e-64
Identities = 119/190 (62%), Positives = 140/190 (73%), Gaps = 21/190 (11%)
Query: 38 CPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQG 97
CPSC + D + E++EHLEAKV + + HPLID+FIPT++G
Sbjct: 170 CPSCGNKLDCKP------------------ELIEHLEAKVREEGSRSHPLIDEFIPTIEG 211
Query: 98 DNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHT--DDEGSETRWHKTGK 155
++GICYTHPEKLPGV++DG +HFFHRPSKAYTTGTRKRRK+ T D + ETRWHKTGK
Sbjct: 212 EDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQTECDVQKGETRWHKTGK 271
Query: 156 TRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFY 215
TR V G KG KKI+VLYTNFG+ RKPEKTNWVMHQYHLG EEE++GELVV K+FY
Sbjct: 272 TRPVMV-SGRQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGDLEEEKEGELVVCKIFY 330
Query: 216 QTQPRQCGTS 225
QTQPRQC S
Sbjct: 331 QTQPRQCSWS 340
>gb|AAU10833.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 360
Score = 244 bits (624), Expect = 1e-63
Identities = 117/208 (56%), Positives = 148/208 (70%), Gaps = 15/208 (7%)
Query: 32 GIHTIKCPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQF 91
G + +CPSC H+ D + G+PAGV+FDP DQE++EHLEAKV HPLID+F
Sbjct: 24 GASSRRCPSCGHDPDCNKPFDMVGMPAGVRFDPTDQELIEHLEAKVKDGGSTSHPLIDEF 83
Query: 92 IPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDE------- 144
I T+QG++GICYTHPE LPGV++DG +HFFHR +KAY TGTRKRRKV D +
Sbjct: 84 IHTIQGEDGICYTHPENLPGVTRDGLSKHFFHRSAKAYPTGTRKRRKVLADQQPDDHPQA 143
Query: 145 -------GSETRWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHL 197
+ETRWHKTGKTR + G KG KKI+VLYT+FG++RK EKT+WVMHQYHL
Sbjct: 144 SKGRNVAAAETRWHKTGKTREITV-RGQPKGCKKILVLYTSFGKKRKAEKTSWVMHQYHL 202
Query: 198 GSNEEEQDGELVVSKVFYQTQPRQCGTS 225
G ++E++GEL++SKVFYQTQ R +
Sbjct: 203 GELDDEKEGELILSKVFYQTQTRSAAAA 230
>gb|AAT38066.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 348
Score = 244 bits (624), Expect = 1e-63
Identities = 117/208 (56%), Positives = 148/208 (70%), Gaps = 15/208 (7%)
Query: 32 GIHTIKCPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQF 91
G + +CPSC H+ D + G+PAGV+FDP DQE++EHLEAKV HPLID+F
Sbjct: 24 GASSRRCPSCGHDPDCNKPFDMVGMPAGVRFDPTDQELIEHLEAKVKDGGSTSHPLIDEF 83
Query: 92 IPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDE------- 144
I T+QG++GICYTHPE LPGV++DG +HFFHR +KAY TGTRKRRKV D +
Sbjct: 84 IHTIQGEDGICYTHPENLPGVTRDGLSKHFFHRSAKAYPTGTRKRRKVLADQQPDDHPQA 143
Query: 145 -------GSETRWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHL 197
+ETRWHKTGKTR + G KG KKI+VLYT+FG++RK EKT+WVMHQYHL
Sbjct: 144 SKGRNVAAAETRWHKTGKTREITV-RGQPKGCKKILVLYTSFGKKRKAEKTSWVMHQYHL 202
Query: 198 GSNEEEQDGELVVSKVFYQTQPRQCGTS 225
G ++E++GEL++SKVFYQTQ R +
Sbjct: 203 GELDDEKEGELILSKVFYQTQTRSAAAA 230
>ref|XP_466515.1| no apical meristem (NAM)-like protein [Oryza sativa (japonica
cultivar-group)] gi|46805288|dbj|BAD16820.1| no apical
meristem (NAM)-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 393
Score = 214 bits (544), Expect = 2e-54
Identities = 109/196 (55%), Positives = 132/196 (66%), Gaps = 9/196 (4%)
Query: 36 IKCPSCSH---NTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFI 92
++CP+C H N+DV Q GLPAGVKFDP+D E+LEHLE K+ K H ID+FI
Sbjct: 36 MECPNCKHVIDNSDVAIQWP--GLPAGVKFDPSDLELLEHLEQKIGLGGSKPHTFIDEFI 93
Query: 93 PTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDD---EGSETR 149
PT+ D GICY+HPE LPG+ KDG HFFHR S AY G RKRRK+ D R
Sbjct: 94 PTIDNDEGICYSHPENLPGMKKDGTSGHFFHRVSNAYGCGQRKRRKISNCDHVVSVEHVR 153
Query: 150 WHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELV 209
WHKTGK++A+ G KG+KKIMVLY + R KP+K NWVMHQYHLG+ E+E+DGELV
Sbjct: 154 WHKTGKSKAI-VEKGVTKGWKKIMVLYKSSQRGAKPDKANWVMHQYHLGAEEDEKDGELV 212
Query: 210 VSKVFYQTQPRQCGTS 225
VSK+ YQ +Q S
Sbjct: 213 VSKISYQLHGKQIDKS 228
>gb|AAQ62870.1| At1g25580 [Arabidopsis thaliana] gi|62319881|dbj|BAD93935.1|
hypothetical protein [Arabidopsis thaliana]
gi|30689293|ref|NP_564238.2| no apical meristem (NAM)
family protein [Arabidopsis thaliana]
Length = 449
Score = 209 bits (531), Expect = 6e-53
Identities = 109/187 (58%), Positives = 129/187 (68%), Gaps = 13/187 (6%)
Query: 38 CPSCSH---NTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPT 94
CP C H N+DV D GLP GVKFDP+D EI+ HL AK HP ID+FIPT
Sbjct: 39 CPKCQHVIDNSDVVDDWP--GLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPT 96
Query: 95 LQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTG 154
+ D+GICYTHP+ LPGV DG V HFFH+ KAY+TGTRKRRK+H DD G + RWHKTG
Sbjct: 97 VNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFG-DVRWHKTG 155
Query: 155 KTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVF 214
+T+ V G +G KKIMVLY K KTNWVMHQYHLG E+E++G+ VVSK+F
Sbjct: 156 RTKPVVL-DGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVSKIF 209
Query: 215 YQTQPRQ 221
YQ QP+Q
Sbjct: 210 YQ-QPQQ 215
>pir||C86386 hypothetical protein F2J7.1 - Arabidopsis thaliana
gi|12321499|gb|AAG50802.1| hypothetical protein
[Arabidopsis thaliana]
Length = 276
Score = 209 bits (531), Expect = 6e-53
Identities = 109/187 (58%), Positives = 129/187 (68%), Gaps = 13/187 (6%)
Query: 38 CPSCSH---NTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPT 94
CP C H N+DV D GLP GVKFDP+D EI+ HL AK HP ID+FIPT
Sbjct: 22 CPKCQHVIDNSDVVDDWP--GLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPT 79
Query: 95 LQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTG 154
+ D+GICYTHP+ LPGV DG V HFFH+ KAY+TGTRKRRK+H DD G + RWHKTG
Sbjct: 80 VNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFG-DVRWHKTG 138
Query: 155 KTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVF 214
+T+ V G +G KKIMVLY K KTNWVMHQYHLG E+E++G+ VVSK+F
Sbjct: 139 RTKPVVL-DGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVSKIF 192
Query: 215 YQTQPRQ 221
YQ QP+Q
Sbjct: 193 YQ-QPQQ 198
>gb|AAG50527.1| unknown protein [Arabidopsis thaliana]
Length = 455
Score = 209 bits (531), Expect = 6e-53
Identities = 109/187 (58%), Positives = 129/187 (68%), Gaps = 13/187 (6%)
Query: 38 CPSCSH---NTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPT 94
CP C H N+DV D GLP GVKFDP+D EI+ HL AK HP ID+FIPT
Sbjct: 45 CPKCQHVIDNSDVVDDWP--GLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPT 102
Query: 95 LQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTG 154
+ D+GICYTHP+ LPGV DG V HFFH+ KAY+TGTRKRRK+H DD G + RWHKTG
Sbjct: 103 VNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFG-DVRWHKTG 161
Query: 155 KTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVF 214
+T+ V G +G KKIMVLY K KTNWVMHQYHLG E+E++G+ VVSK+F
Sbjct: 162 RTKPVVL-DGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVSKIF 215
Query: 215 YQTQPRQ 221
YQ QP+Q
Sbjct: 216 YQ-QPQQ 221
>gb|AAK07611.1| CUC2-like protein [Brassica napus]
Length = 189
Score = 201 bits (510), Expect = 2e-50
Identities = 94/116 (81%), Positives = 105/116 (90%), Gaps = 2/116 (1%)
Query: 112 VSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDE-GSETRWHKTGKTRAVFAGGGAVKGFK 170
V+KDG VRHFFHRPSKAYTTGTRKRRKVHTD E ETRWHKTGKTR V GG V+G+K
Sbjct: 1 VNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSEVDGETRWHKTGKTRPVLTGG-RVRGYK 59
Query: 171 KIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCGTSI 226
KI+VLYTN+G+Q+KPEKTNWVMHQYHLG+NEEE++GELVVSKVFYQTQPRQCG S+
Sbjct: 60 KILVLYTNYGKQKKPEKTNWVMHQYHLGTNEEEKEGELVVSKVFYQTQPRQCGGSV 115
>emb|CAB87788.1| putative protein [Arabidopsis thaliana]
gi|15241416|ref|NP_196953.1| no apical meristem (NAM)
family protein [Arabidopsis thaliana]
gi|11357552|pir||T48622 hypothetical protein F18O22.280
- Arabidopsis thaliana
Length = 350
Score = 171 bits (434), Expect = 1e-41
Identities = 97/188 (51%), Positives = 123/188 (64%), Gaps = 5/188 (2%)
Query: 36 IKCPSCSHNTDVRDQ-GGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPT 94
I C +CS+ D + GLP GVKF+P D+E++EHLEAK D K H LI FI +
Sbjct: 37 INCFNCSYRIDNSNVLTPWPGLPKGVKFEPTDEEVIEHLEAKCGIDGLKPHLLIQDFICS 96
Query: 95 LQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKV-HTDDEGSETRWHKT 153
+ D GI YTHP+ LPGVSKDG FF++ + AY G RKRR++ T + RWHKT
Sbjct: 97 VTQDVGINYTHPQNLPGVSKDGTSVFFFNKTAHAYQNGQRKRRRITPTSLKDDTVRWHKT 156
Query: 154 GKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKV 213
G+T+ V G KG KKIMVLY + + KPEK+NWV+HQYHLG+ EE + GE VVSK+
Sbjct: 157 GQTKPVML-NGIQKGCKKIMVLYKSARKGFKPEKSNWVLHQYHLGT-EEGEIGEYVVSKI 214
Query: 214 FYQTQPRQ 221
YQ QP+Q
Sbjct: 215 TYQ-QPKQ 221
>gb|AAF01544.1| hypothetical protein [Arabidopsis thaliana]
gi|15232150|ref|NP_186809.1| no apical meristem (NAM)
family protein [Arabidopsis thaliana]
Length = 370
Score = 166 bits (421), Expect = 4e-40
Identities = 93/189 (49%), Positives = 122/189 (64%), Gaps = 5/189 (2%)
Query: 32 GIHTIKCPSCSHNTDVRDQG-GIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQ 90
G H IKCP+C++ D + GLP GVKF+P D++I+E LEAK + H LI++
Sbjct: 31 GAH-IKCPNCTYRIDNSNVLIPWPGLPKGVKFEPTDEDIIEFLEAKCGIGGSEPHVLIEE 89
Query: 91 FIPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSE-TR 149
FI + D GI YTHP+ LPG +KDG FFH+ +AY TG RKRRK+ E R
Sbjct: 90 FIRPVTEDVGINYTHPQNLPGANKDGVSVFFFHKTVQAYGTGQRKRRKITPTLVNDEPVR 149
Query: 150 WHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELV 209
WHKTG+T+ V G +G KKIMVLY + + KPEK+NWV+HQYHLG+ E ++ G+ V
Sbjct: 150 WHKTGRTKPVML-SGVQRGCKKIMVLYKSARKGTKPEKSNWVLHQYHLGT-EGKEIGDYV 207
Query: 210 VSKVFYQTQ 218
VSK+ YQ Q
Sbjct: 208 VSKITYQQQ 216
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.136 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,586,590
Number of Sequences: 2540612
Number of extensions: 20661330
Number of successful extensions: 38245
Number of sequences better than 10.0: 336
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 37845
Number of HSP's gapped (non-prelim): 352
length of query: 230
length of database: 863,360,394
effective HSP length: 124
effective length of query: 106
effective length of database: 548,324,506
effective search space: 58122397636
effective search space used: 58122397636
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0336.3