BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0336.12
(267 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB79796.1| putative protein [Arabidopsis thaliana] gi|28973... 115 2e-24
ref|XP_468236.1| hypothetical protein [Oryza sativa (japonica cu... 112 8e-24
gb|AAP49526.1| At2g24100 [Arabidopsis thaliana] gi|15809913|gb|A... 108 2e-22
gb|AAD03372.2| expressed protein [Arabidopsis thaliana] gi|18400... 108 2e-22
emb|CAC84497.1| hypothetical protein [Pinus pinaster] 108 2e-22
gb|AAD25610.1| Hypothetical protein [Arabidopsis thaliana] gi|25... 98 3e-19
ref|NP_175832.1| hypothetical protein [Arabidopsis thaliana] 94 4e-18
gb|AAF26079.1| unknown protein [Arabidopsis thaliana] gi|1523004... 91 3e-17
gb|AAM09320.2| similar to Dictyostelium discoideum (Slime mold).... 74 6e-12
ref|XP_638504.1| hypothetical protein DDB0218621 [Dictyostelium ... 47 7e-04
dbj|BAD72448.1| unknown protein [Oryza sativa (japonica cultivar... 45 0.002
ref|NP_705040.1| hypothetical protein [Plasmodium falciparum 3D7... 35 1.7
ref|NP_969048.1| ABC-type transporter [Bdellovibrio bacteriovoru... 35 2.2
gb|EAK87317.1| hypothetical protein cgd3_160 [Cryptosporidium pa... 35 2.8
ref|XP_665663.1| hypothetical protein Chro.30025 [Cryptosporidiu... 35 2.8
emb|CAA06932.1| AND-1 protein [Homo sapiens] gi|38648713|gb|AAH6... 33 6.3
ref|NP_704780.1| hypothetical protein [Plasmodium falciparum 3D7... 33 6.3
emb|CAI75545.1| integral membrane protein family I, putative [Th... 33 6.3
ref|NP_001008397.1| WD repeat and HMG-box DNA binding protein 1 ... 33 6.3
gb|AAM22188.1| Gal/GalNAc lectin heavy subunit region A [Entamoe... 33 6.3
>emb|CAB79796.1| putative protein [Arabidopsis thaliana] gi|28973227|gb|AAO63938.1|
unknown protein [Arabidopsis thaliana]
gi|5725442|emb|CAB52451.1| putative protein [Arabidopsis
thaliana] gi|28393759|gb|AAO42289.1| unknown protein
[Arabidopsis thaliana] gi|15234853|ref|NP_194807.1|
expressed protein [Arabidopsis thaliana]
gi|25407680|pir||C85360 hypothetical protein AT4g30780
[imported] - Arabidopsis thaliana
Length = 589
Score = 115 bits (287), Expect = 2e-24
Identities = 61/156 (39%), Positives = 89/156 (56%), Gaps = 4/156 (2%)
Query: 64 KFAPATFYAKLLNVGKYNFIPTTVNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPWDRI 123
K + F A LL +G++ + LV KC FA+ KL+WE+L+ + K K E+ W I
Sbjct: 135 KLKASNFPASLLKIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLE--QGLKSKIEIQWSDI 192
Query: 124 SAIRAFIEENKTEILEIELDEQPIFHKEINSQST-HTTWEISDHDFTGGHAMTYRIHHLE 182
A++A E+ L + L QP+F +E N Q HT W+ + DFT G A R H L+
Sbjct: 193 MALKANCPEDGPGTLTLVLARQPLFFRETNPQPRKHTLWQATS-DFTDGQASMNRQHFLQ 251
Query: 183 FASGDLGQHYENMLKCDERLMKLSQQPFPRLDSPYF 218
A G + +H+E +++CD RL LS+QP +DSPYF
Sbjct: 252 CAQGIMNKHFEKLVQCDHRLFHLSRQPEIAIDSPYF 287
>ref|XP_468236.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|47497146|dbj|BAD19195.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|47497593|dbj|BAD19663.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 523
Score = 112 bits (281), Expect = 8e-24
Identities = 70/197 (35%), Positives = 107/197 (53%), Gaps = 11/197 (5%)
Query: 31 PLGLK-RTTSAMKEREKMWRKMQKSKKQNSSTTLKFAP-----ATFYAKLLNVGKYNFIP 84
PLGL+ R + ++ E +M M+ +KK++ + A + F A L +G +
Sbjct: 99 PLGLRLRKSPSLLELIQMKLAMENTKKEDIKSRSLIASERVKASNFAADFLKIGTWECTS 158
Query: 85 TTVNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPWDRISAIRAFIEENKTEILEIELDE 144
LV KC FA+ KL+WE+LD+ +K E+ W I A++A EN L++ L
Sbjct: 159 QYEGDLVAKCYFAKHKLVWEVLDAGLKRKI--EIQWSDIIALKATCPENGIGTLDLVLAR 216
Query: 145 QPIFHKEINSQST-HTTWEISDHDFTGGHAMTYRIHHLEFASGDLGQHYENMLKCDERLM 203
P F KE + Q HT W+++ DFTGG A R H L+ S L +++E +++CD+RL
Sbjct: 217 PPTFFKETDPQPRKHTLWQVAS-DFTGGQASIKRRHILQCQSSLLSKNFEKLIQCDQRLN 275
Query: 204 KLSQQPFPRLDSPYFGP 220
LS QP+ +DSP F P
Sbjct: 276 YLSLQPY-MIDSPVFRP 291
>gb|AAP49526.1| At2g24100 [Arabidopsis thaliana] gi|15809913|gb|AAL06884.1|
At2g24100/F27D4.1 [Arabidopsis thaliana]
gi|14596217|gb|AAK68836.1| Unknown protein [Arabidopsis
thaliana] gi|25371341|pir||F84632 hypothetical protein
At2g24100 [imported] - Arabidopsis thaliana
Length = 466
Score = 108 bits (270), Expect = 2e-22
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 4/159 (2%)
Query: 61 TTLKFAPATFYAKLLNVGKYNFIPTTVNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPW 120
T K + F A +L +G++ + LV KC FA+ KL+WE+L+ + K K E+ W
Sbjct: 105 TVEKLKASNFPATILRIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLE--QGLKSKIEIQW 162
Query: 121 DRISAIRAFIEENKTEILEIELDEQPIFHKEINSQST-HTTWEISDHDFTGGHAMTYRIH 179
I A++A + E++ L I L +P+F +E N Q HT W+ + DFT G A R H
Sbjct: 163 SDIMALKANLPEDEPGTLTIVLARRPLFFRETNPQPRKHTLWQATS-DFTDGQASMNRQH 221
Query: 180 HLEFASGDLGQHYENMLKCDERLMKLSQQPFPRLDSPYF 218
L+ G + +H+E +++CD RL LS+QP L +P+F
Sbjct: 222 FLQCPPGIMNKHFEKLVQCDHRLFCLSRQPEINLAAPFF 260
>gb|AAD03372.2| expressed protein [Arabidopsis thaliana]
gi|18400458|ref|NP_565562.1| expressed protein
[Arabidopsis thaliana]
Length = 463
Score = 108 bits (270), Expect = 2e-22
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 4/159 (2%)
Query: 61 TTLKFAPATFYAKLLNVGKYNFIPTTVNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPW 120
T K + F A +L +G++ + LV KC FA+ KL+WE+L+ + K K E+ W
Sbjct: 102 TVEKLKASNFPATILRIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLE--QGLKSKIEIQW 159
Query: 121 DRISAIRAFIEENKTEILEIELDEQPIFHKEINSQST-HTTWEISDHDFTGGHAMTYRIH 179
I A++A + E++ L I L +P+F +E N Q HT W+ + DFT G A R H
Sbjct: 160 SDIMALKANLPEDEPGTLTIVLARRPLFFRETNPQPRKHTLWQATS-DFTDGQASMNRQH 218
Query: 180 HLEFASGDLGQHYENMLKCDERLMKLSQQPFPRLDSPYF 218
L+ G + +H+E +++CD RL LS+QP L +P+F
Sbjct: 219 FLQCPPGIMNKHFEKLVQCDHRLFCLSRQPEINLAAPFF 257
>emb|CAC84497.1| hypothetical protein [Pinus pinaster]
Length = 197
Score = 108 bits (269), Expect = 2e-22
Identities = 64/166 (38%), Positives = 90/166 (53%), Gaps = 6/166 (3%)
Query: 54 SKKQNSSTTLKFAPATFYAKLLNVGKYNFIPTTVNQLVVKCQFARRKLIWEILDSSKNKK 113
S QN+ LK + F L +G + I LV KC FA+ KL+WE+LD K
Sbjct: 8 SAAQNNPDKLK--ASNFPVSNLRIGTWECISRYEGDLVAKCYFAKHKLVWEVLDGGL--K 63
Query: 114 FKAEVPWDRISAIRAFIEENKTEILEIELDEQPIFHKEINSQST-HTTWEISDHDFTGGH 172
K E+ W I+A++A E++ L+IE+ P+F +E N Q HT W+ + DFTGG
Sbjct: 64 SKIEIQWSDITALKASYLEDEPGTLDIEVSRPPLFFRETNPQPRKHTLWQATS-DFTGGQ 122
Query: 173 AMTYRIHHLEFASGDLGQHYENMLKCDERLMKLSQQPFPRLDSPYF 218
A R H L+ G L +HYE +++CD RL LS++ F SP F
Sbjct: 123 ATICRRHFLQCPHGLLNRHYEKLIQCDPRLNLLSKKGFLSEASPLF 168
>gb|AAD25610.1| Hypothetical protein [Arabidopsis thaliana] gi|25405713|pir||E96584
hypothetical protein F20D21.12 [imported] - Arabidopsis
thaliana
Length = 444
Score = 97.8 bits (242), Expect = 3e-19
Identities = 75/240 (31%), Positives = 113/240 (46%), Gaps = 27/240 (11%)
Query: 5 PPFGLELSSST--MNEREPHLRNVCPKPPLGLKRTTSAMKEREKMWRKMQKSKKQNSSTT 62
P L L+ S +N+ E +L C P + T +R + + +K K N
Sbjct: 6 PHLNLSLTKSPELINKIESYLNGHCTCP----HQQTENSSKRSTLPKSPEKLKAMN---- 57
Query: 63 LKFAPATFYAKLLNVGKYNFIPTTVNQLVVKCQFARRKLIWEIL-----DSSKNKKFKAE 117
F + +G + + + +V K FA++KLIWE L ++ K K E
Sbjct: 58 -------FPISTIRIGGWVVVAKNPDDIVAKFYFAKKKLIWEFLFGEPETNTLRLKRKIE 110
Query: 118 VPWDRISAIRAFIEE-NKTEILEIELDEQPIFHKEINSQS-THTTWEISDHDFTGGHAMT 175
+ W+ +S+ I ++T IL+IEL ++P F E N Q+ HT W+ DHDFTG HA
Sbjct: 111 IQWNDVSSFEESISSRDETGILKIELKKRPTFFIETNPQAGKHTQWKQLDHDFTGDHASN 170
Query: 176 YRIHHLEFASGDLGQHYENMLKCDERLMKLSQQPFPRLDSPYFGPPVLFKNIRDYNTVQH 235
YR H L F G L ++ E ++ D KL + PFP +S YF F+N N+ H
Sbjct: 171 YRRHTLHFPPGVLQKNLEKLV-TDSFWSKLYEVPFPVHESRYFDSG--FENNSSRNSHSH 227
>ref|NP_175832.1| hypothetical protein [Arabidopsis thaliana]
Length = 314
Score = 94.0 bits (232), Expect = 4e-18
Identities = 61/173 (35%), Positives = 90/173 (51%), Gaps = 10/173 (5%)
Query: 70 FYAKLLNVGKYNFIPTTVNQLVVKCQFARRKLIWEIL-----DSSKNKKFKAEVPWDRIS 124
F + +G + + + +V K FA++KLIWE L ++ K K E+ W+ +S
Sbjct: 3 FPISTIRIGGWVVVAKNPDDIVAKFYFAKKKLIWEFLFGEPETNTLRLKRKIEIQWNDVS 62
Query: 125 AIRAFIEE-NKTEILEIELDEQPIFHKEINSQS-THTTWEISDHDFTGGHAMTYRIHHLE 182
+ I ++T IL+IEL ++P F E N Q+ HT W+ DHDFTG HA YR H L
Sbjct: 63 SFEESISSRDETGILKIELKKRPTFFIETNPQAGKHTQWKQLDHDFTGDHASNYRRHTLH 122
Query: 183 FASGDLGQHYENMLKCDERLMKLSQQPFPRLDSPYFGPPVLFKNIRDYNTVQH 235
F G L ++ E ++ D KL + PFP +S YF F+N N+ H
Sbjct: 123 FPPGVLQKNLEKLV-TDSFWSKLYEVPFPVHESRYFDSG--FENNSSRNSHSH 172
>gb|AAF26079.1| unknown protein [Arabidopsis thaliana] gi|15230043|ref|NP_187228.1|
expressed protein [Arabidopsis thaliana]
Length = 410
Score = 91.3 bits (225), Expect = 3e-17
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 13/179 (7%)
Query: 52 QKSKKQNSSTTLKFAPA-----TFYAKLLNVGKYNFIPTTVNQLVVKCQFARRKLIWEIL 106
Q+++ + ++TL +P F + +G F+ + +V K FA++KL+WE L
Sbjct: 53 QQTENSSKTSTLPKSPEKLKAMNFPISTIKIGDCVFVAKNPDDIVAKFYFAKKKLLWEFL 112
Query: 107 -----DSSKNKKFKAEVPWDRISAIRAFIEE-NKTEILEIELDEQPIFHKEINSQS-THT 159
+ K K E+ W+ +S+ I ++T IL+IEL ++P F E N Q+ HT
Sbjct: 113 FGEPVANMPRLKSKIEIQWNDVSSFEESINSRDETGILKIELKKRPTFFTETNPQAGKHT 172
Query: 160 TWEISDHDFTGGHAMTYRIHHLEFASGDLGQHYENMLKCDERLMKLSQQPFPRLDSPYF 218
W+ D+DFTG A YR H L F G L ++ E +L D KL + PFP +S YF
Sbjct: 173 QWKQLDYDFTGDQASYYRRHTLHFPPGVLQKNLEKLL-TDSFWSKLYKVPFPVHESLYF 230
>gb|AAM09320.2| similar to Dictyostelium discoideum (Slime mold).
Homeobox-containing protein (Fragment)
gi|66820947|ref|XP_644015.1| hypothetical protein
DDB0167808 [Dictyostelium discoideum]
gi|60472067|gb|EAL70020.1| hypothetical protein
DDB0167808 [Dictyostelium discoideum]
Length = 1108
Score = 73.6 bits (179), Expect = 6e-12
Identities = 44/146 (30%), Positives = 76/146 (51%), Gaps = 5/146 (3%)
Query: 62 TLKFAPATFYAKLLNVGKYNFIPTTVNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPWD 121
T K P+ A + VG++ + ++ K F +++++WE+L K K + +
Sbjct: 476 TSKLKPSNLAATKIKVGEWECSASFPGDIIAKFYFTKKQIVWELL--KLGLKSKMVISFS 533
Query: 122 RISAIRAFIEENKTEILEIELDEQPIFHKEINSQ-STHTTWEISDHDFTGGH-AMTYRIH 179
I+A++ + + L IE+ + P F+KE+N Q +TTW +S+ DFT A TYR H
Sbjct: 534 EITAVKVEDTSDDSATLSIEISKAPKFYKEVNPQPKKNTTWNLSN-DFTDNQSASTYRRH 592
Query: 180 HLEFASGDLGQHYENMLKCDERLMKL 205
L F L ++ + K D++L KL
Sbjct: 593 ILTFKKSSLAKNIVKLHKSDQKLKKL 618
>ref|XP_638504.1| hypothetical protein DDB0218621 [Dictyostelium discoideum]
gi|60467112|gb|EAL65150.1| hypothetical protein
DDB0218621 [Dictyostelium discoideum]
Length = 1222
Score = 46.6 bits (109), Expect = 7e-04
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 75 LNVGKYNFIPTTVNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPWDRISAIRAFIEENK 134
+ +G + I + LV + + RK +WEI ++ K+ K E+ +D ++++ + +
Sbjct: 646 MKIGNWEKISSFCGDLVARFSYTERKFMWEIFNNGKSLT-KMEMFFDDVTSVDINLLDGD 704
Query: 135 TEILEIELDEQPIFHKEINSQSTHTTWEISDHDFTGGHAMTYRIHHLEFASGDLGQHYEN 194
+ + L + P F++ I ++ + S DFTGG A H L F L E
Sbjct: 705 KVEMTLHLKKCPTFYEAIFIENIPSMVYQSCGDFTGGEATKSNKHTLCFIKNALANPLEA 764
Query: 195 MLKCDER 201
+ D R
Sbjct: 765 LSSTDPR 771
>dbj|BAD72448.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 299
Score = 45.1 bits (105), Expect = 0.002
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 177 RIHHLEFASGDLGQHYENMLKCDERLMKLSQQPFPRLDSPYFGP 220
R H L+ S L +++E +L+CD+RL +LSQQP LDSP F P
Sbjct: 3 RRHFLQCPSSLLSKNFEKLLQCDQRLNQLSQQPDIILDSPVFEP 46
>ref|NP_705040.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23615285|emb|CAD52275.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 2900
Score = 35.4 bits (80), Expect = 1.7
Identities = 24/86 (27%), Positives = 42/86 (47%), Gaps = 4/86 (4%)
Query: 79 KYNFIPTTVNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPWDRISAIRAFIE----ENK 134
KY T NQ ++K ++K I + SKNK F+ + + I+ + IE E K
Sbjct: 2750 KYKLEQTNNNQYILKIIAIKKKKIHKTFSLSKNKHFRKCLEIELINTEKKNIENEMYERK 2809
Query: 135 TEILEIELDEQPIFHKEINSQSTHTT 160
+L+ ++ + +FHK+ +TT
Sbjct: 2810 ENVLDKKIYGKQVFHKKSFDNLYNTT 2835
>ref|NP_969048.1| ABC-type transporter [Bdellovibrio bacteriovorus HD100]
gi|39575875|emb|CAE80041.1| ABC-type transporter
[Bdellovibrio bacteriovorus HD100]
Length = 466
Score = 35.0 bits (79), Expect = 2.2
Identities = 19/87 (21%), Positives = 42/87 (47%), Gaps = 2/87 (2%)
Query: 33 GLKRTTSAMKEREKMWRKMQKSKKQNSSTTLKFAPATFY--AKLLNVGKYNFIPTTVNQL 90
G+ + + +E+ W+++ +S+ QN S L + ++L++ +F+P N+L
Sbjct: 43 GVTTALKSKESKEETWKQLLQSQAQNISAELGELKGSLMKAGQMLSMYGEHFLPPEANEL 102
Query: 91 VVKCQFARRKLIWEILDSSKNKKFKAE 117
+ Q L WE ++ + K+ E
Sbjct: 103 LKSLQHDSPPLSWEAIEPTLKKQLPPE 129
>gb|EAK87317.1| hypothetical protein cgd3_160 [Cryptosporidium parvum]
gi|66356366|ref|XP_625330.1| hypothetical protein
cgd3_160 [Cryptosporidium parvum]
Length = 684
Score = 34.7 bits (78), Expect = 2.8
Identities = 23/113 (20%), Positives = 50/113 (43%), Gaps = 23/113 (20%)
Query: 37 TTSAMKEREKMWRK----MQKSKKQNSSTTLKFAPATFYAKLLNVGKYNFIPTTVNQLVV 92
T+ MK + +W + +Q + + + ++++ +LLN+ + IP + QL+
Sbjct: 464 TSELMKRDKNLWTRGLYMLQNTDRSELESIVRWS-----CRLLNISNFRNIPIQIGQLLA 518
Query: 93 KCQFARRKLIWEILDSSKNKKFKAEVPWDRISAIRAFIEENKTEILEIELDEQ 145
K + I I +S+ +KK + + N E++ IEL ++
Sbjct: 519 KKSTSATPKITHIFESASSKKISS--------------QNNSQEVISIELHDR 557
>ref|XP_665663.1| hypothetical protein Chro.30025 [Cryptosporidium hominis]
gi|54656452|gb|EAL35433.1| hypothetical protein
Chro.30025 [Cryptosporidium hominis]
Length = 577
Score = 34.7 bits (78), Expect = 2.8
Identities = 23/113 (20%), Positives = 50/113 (43%), Gaps = 23/113 (20%)
Query: 37 TTSAMKEREKMWRK----MQKSKKQNSSTTLKFAPATFYAKLLNVGKYNFIPTTVNQLVV 92
T+ MK + +W + +Q + + + ++++ +LLN+ + IP + QL+
Sbjct: 464 TSELMKRDKNLWTRGLYMLQNTDRSELESIVRWS-----CRLLNISNFRNIPIQIGQLLA 518
Query: 93 KCQFARRKLIWEILDSSKNKKFKAEVPWDRISAIRAFIEENKTEILEIELDEQ 145
K + I I +S+ +KK + + N E++ IEL ++
Sbjct: 519 KKSTSATPKITHIFESASSKKISS--------------QNNSQEVISIELHDR 557
>emb|CAA06932.1| AND-1 protein [Homo sapiens] gi|38648713|gb|AAH63041.1| WD repeat and
HMG-box DNA binding protein 1 [Homo sapiens]
gi|5901892|ref|NP_009017.1| WD repeat and HMG-box DNA
binding protein 1 isoform 1 [Homo sapiens]
gi|28558057|sp|O75717|WDHD1_HUMAN WD repeat and HMG-box
DNA binding protein 1 (Acidic nucleoplasmic DNA-binding
protein 1) (And-1)
Length = 1129
Score = 33.5 bits (75), Expect = 6.3
Identities = 17/58 (29%), Positives = 28/58 (47%)
Query: 11 LSSSTMNEREPHLRNVCPKPPLGLKRTTSAMKEREKMWRKMQKSKKQNSSTTLKFAPA 68
LS +T NE+ P ++ + PKP S ++R K ++ K++N L PA
Sbjct: 949 LSRTTNNEKSPIIKPLIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPA 1006
>ref|NP_704780.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23505141|emb|CAD51923.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 698
Score = 33.5 bits (75), Expect = 6.3
Identities = 18/66 (27%), Positives = 35/66 (52%), Gaps = 3/66 (4%)
Query: 79 KYNFIPTTVNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPWDRISAIRAFIEENKTEIL 138
K N++ TT+NQ V KC+ + L + + +K V +I + A+++ K I+
Sbjct: 631 KSNYLETTINQDVSKCKIVNKNLKHPM---KGDNLYKEIVELKKIKSNHAYVQIRKKYIM 687
Query: 139 EIELDE 144
++ LD+
Sbjct: 688 KVSLDD 693
>emb|CAI75545.1| integral membrane protein family I, putative [Theileria annulata]
Length = 619
Score = 33.5 bits (75), Expect = 6.3
Identities = 22/87 (25%), Positives = 42/87 (47%), Gaps = 8/87 (9%)
Query: 94 CQFARRKLIWEILDSSKNKKFKAEVPWDRISAIRAFIEENKTEILEIELDEQPIFHKEIN 153
C + L+ ++ D+ N +E P + ++ ++ + ENK ++ E+ +D + F K+IN
Sbjct: 242 CTCNKSNLLSDLNDNFGNLHVISEYPPNLLTDSKSNLLENKIDVPEVYIDTKKTFIKDIN 301
Query: 154 SQSTHTTWEISDHDFTGGHAMTYRIHH 180
SDHD G T +I +
Sbjct: 302 I--------CSDHDSETGSITTKKIRN 320
>ref|NP_001008397.1| WD repeat and HMG-box DNA binding protein 1 isoform 2 [Homo
sapiens]
Length = 1006
Score = 33.5 bits (75), Expect = 6.3
Identities = 17/58 (29%), Positives = 28/58 (47%)
Query: 11 LSSSTMNEREPHLRNVCPKPPLGLKRTTSAMKEREKMWRKMQKSKKQNSSTTLKFAPA 68
LS +T NE+ P ++ + PKP S ++R K ++ K++N L PA
Sbjct: 826 LSRTTNNEKSPIIKPLIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPA 883
>gb|AAM22188.1| Gal/GalNAc lectin heavy subunit region A [Entamoeba histolytica]
Length = 194
Score = 33.5 bits (75), Expect = 6.3
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 24/107 (22%)
Query: 87 VNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPWDRISAIRAFIEENKTEILEIE----- 141
+N+ +K F R++ + I K EV WD + ++E + E ++I
Sbjct: 93 INKTNIKQDFCRKEYAYPIE--------KYEVDWDNVP-----VDEQRIESVDINGKTCF 139
Query: 142 --LDEQPIFHKEINSQSTHTT----WEISDHDFTGGHAMTYRIHHLE 182
++P+ + +N++ T+ T +++ DF GG ++T+R + E
Sbjct: 140 KYAAKRPLAYVYLNTKMTYATKTEAYDVCRMDFIGGRSITFRSFNTE 186
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 453,247,422
Number of Sequences: 2540612
Number of extensions: 18226672
Number of successful extensions: 58499
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 58471
Number of HSP's gapped (non-prelim): 25
length of query: 267
length of database: 863,360,394
effective HSP length: 126
effective length of query: 141
effective length of database: 543,243,282
effective search space: 76597302762
effective search space used: 76597302762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0336.12