BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0336.10
(114 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB65313.1| VAP27 [Nicotiana plumbaginifolia] gi|11288307|pi... 81 5e-15
ref|XP_467003.1| putative vesicle-associated membrane protein-as... 81 7e-15
ref|XP_480176.1| putative vesicle-associated membrane protein-as... 79 3e-14
emb|CAB82664.1| putative protein [Arabidopsis thaliana] gi|11288... 77 8e-14
gb|AAQ63968.1| VAP27-1 [Arabidopsis thaliana] gi|30023744|gb|AAP... 77 1e-13
gb|AAM63134.1| putative VAMP-associated protein [Arabidopsis tha... 77 1e-13
ref|XP_480160.1| putative 27k vesicle-associated membrane protei... 75 4e-13
ref|NP_914955.1| P0504E02.2 [Oryza sativa (japonica cultivar-gro... 74 8e-13
dbj|BAD87304.1| putative VAP27 [Oryza sativa (japonica cultivar-... 74 8e-13
ref|NP_172359.2| vesicle-associated membrane family protein / VA... 74 1e-12
gb|AAF99771.1| F22O13.31 [Arabidopsis thaliana] gi|25407055|pir|... 74 1e-12
pir||T00738 hypothetical protein F22O13.33 - Arabidopsis thaliana 74 1e-12
gb|AAM62506.1| VAMP (vesicle-associated membrane protein)-associ... 73 1e-12
gb|AAP13391.1| At2g45140 [Arabidopsis thaliana] gi|21594019|gb|A... 73 2e-12
gb|AAP54536.1| putative vesicle-associated membrane protein [Ory... 66 2e-10
gb|AAP54911.1| putative membrane protein [Oryza sativa (japonica... 63 2e-09
ref|XP_475148.1| 'unknown protein, contains major sperm protein ... 63 2e-09
gb|AAC63657.1| unknown protein [Arabidopsis thaliana] gi|2541216... 63 2e-09
emb|CAE01696.2| OSJNBa0010H02.20 [Oryza sativa (japonica cultiva... 62 4e-09
ref|NP_175538.1| vesicle-associated membrane protein, putative /... 62 4e-09
>emb|CAB65313.1| VAP27 [Nicotiana plumbaginifolia] gi|11288307|pir||JC7234 27k
vesicle-associated membrane protein-associated protein -
curled-leaved tobacco
Length = 240
Score = 81.3 bits (199), Expect = 5e-15
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 5 EILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQG 62
E+LQIEP EL F E K+ C + L NK+ NYVAF+++ + P+KY V P G++MP
Sbjct: 7 ELLQIEPLELQFPFELKKQISCSIQLTNKSDNYVAFKVKTTNPKKYCVRPNT-GVVMPHS 65
Query: 63 TYDIIVSRKSDKLPPPGFECTDRFFIQSMALS----VKDLFTENRGK---RHVEEKELK 114
D+IV+ ++ K P +C D+F +QS+ S KD+ E K HVE+ +L+
Sbjct: 66 ASDVIVTMQAQKEAPADMQCKDKFLLQSVVASPGATAKDITPEMFNKEEGNHVEDCKLR 124
>ref|XP_467003.1| putative vesicle-associated membrane protein-associated protein
[Oryza sativa (japonica cultivar-group)]
gi|49388105|dbj|BAD25238.1| putative vesicle-associated
membrane protein-associated protein [Oryza sativa
(japonica cultivar-group)]
Length = 259
Score = 80.9 bits (198), Expect = 7e-15
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 12/123 (9%)
Query: 2 DHAEILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIM 59
D E+L I+P EL F E K+ C LHL NKT YV F+++ + P+KY V P GI+
Sbjct: 38 DSRELLGIDPPELIFPFELKKQISCSLHLTNKTDEYVTFKVKTTSPKKYCVRP-NNGIVA 96
Query: 60 PQGTYDIIVSRKSDKLPPPGFECTDRFFIQSMALSVK--------DLFTENRGKRHVEEK 111
PQ T +++V+ ++ + PP +C D+F +QS ++ + D+FT+ G V+E
Sbjct: 97 PQSTSNVLVTMQAQREAPPDMQCKDKFLVQSAIVTQELTPKDITGDMFTKESG-NVVDEV 155
Query: 112 ELK 114
+LK
Sbjct: 156 KLK 158
>ref|XP_480176.1| putative vesicle-associated membrane protein-associated protein
[Oryza sativa (japonica cultivar-group)]
gi|37805852|dbj|BAC99503.1| putative vesicle-associated
membrane protein-associated protein [Oryza sativa
(japonica cultivar-group)]
Length = 243
Score = 79.0 bits (193), Expect = 3e-14
Identities = 42/120 (35%), Positives = 76/120 (63%), Gaps = 12/120 (10%)
Query: 5 EILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQG 62
E+L+I+P EL F E K+ C + L N + +Y+AF+++ + P+KY V P G +++P+
Sbjct: 11 ELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTG-VVLPRS 69
Query: 63 TYDIIVSRKSDKLPPPGFECTDRFFIQSM----ALSVKD----LFTENRGKRHVEEKELK 114
T D++V+ ++ + PP +C D+F +QS+ ++VKD +FT+ G + VEE +L+
Sbjct: 70 TCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNK-VEEVKLR 128
>emb|CAB82664.1| putative protein [Arabidopsis thaliana] gi|11288305|pir||T47871
hypothetical protein T4C21.10 - Arabidopsis thaliana
Length = 250
Score = 77.4 bits (189), Expect = 8e-14
Identities = 43/120 (35%), Positives = 74/120 (60%), Gaps = 8/120 (6%)
Query: 1 MDHAEILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGII 58
M ++E+L +EP +L F E K+ C L+L NKT N VAF+++ + P+KY V P G++
Sbjct: 17 MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNT-GVV 75
Query: 59 MPQGTYDIIVSRKSDKLPPPGFECTDRFFIQ----SMALSVKDLFTENRGKRHVEEKELK 114
+P+ T +++V+ ++ K P +C D+F +Q S ++ K++ E G R VEE +L+
Sbjct: 76 LPRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMAGHR-VEETKLR 134
>gb|AAQ63968.1| VAP27-1 [Arabidopsis thaliana] gi|30023744|gb|AAP13405.1| At3g60600
[Arabidopsis thaliana] gi|17473763|gb|AAL38320.1|
putative protein [Arabidopsis thaliana]
gi|18411661|ref|NP_567101.1| vesicle-associated membrane
protein, putative / VAMP, putative [Arabidopsis
thaliana]
Length = 256
Score = 76.6 bits (187), Expect = 1e-13
Identities = 42/124 (33%), Positives = 74/124 (58%), Gaps = 12/124 (9%)
Query: 1 MDHAEILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGII 58
M ++E+L +EP +L F E K+ C L+L NKT N VAF+++ + P+KY V P G++
Sbjct: 17 MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNT-GVV 75
Query: 59 MPQGTYDIIVSRKSDKLPPPGFECTDRFFIQSMALS--------VKDLFTENRGKRHVEE 110
+P+ T +++V+ ++ K P +C D+F +Q + S ++F++ G R VEE
Sbjct: 76 LPRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHR-VEE 134
Query: 111 KELK 114
+L+
Sbjct: 135 TKLR 138
>gb|AAM63134.1| putative VAMP-associated protein [Arabidopsis thaliana]
Length = 240
Score = 76.6 bits (187), Expect = 1e-13
Identities = 42/124 (33%), Positives = 74/124 (58%), Gaps = 12/124 (9%)
Query: 1 MDHAEILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGII 58
M ++E+L +EP +L F E K+ C L+L NKT N VAF+++ + P+KY V P G++
Sbjct: 1 MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNT-GVV 59
Query: 59 MPQGTYDIIVSRKSDKLPPPGFECTDRFFIQSMALS--------VKDLFTENRGKRHVEE 110
+P+ T +++V+ ++ K P +C D+F +Q + S ++F++ G R VEE
Sbjct: 60 LPRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHR-VEE 118
Query: 111 KELK 114
+L+
Sbjct: 119 TKLR 122
>ref|XP_480160.1| putative 27k vesicle-associated membrane protein-associated
protein [Oryza sativa (japonica cultivar-group)]
gi|51964702|ref|XP_507135.1| PREDICTED OJ1177_E11.5
gene product [Oryza sativa (japonica cultivar-group)]
gi|37805977|dbj|BAC99391.1| putative 27k
vesicle-associated membrane protein-associated protein
[Oryza sativa (japonica cultivar-group)]
Length = 237
Score = 75.1 bits (183), Expect = 4e-13
Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 4 AEILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQ 61
A L+I+P+EL+F E K+ C + L NKT +YVAF+++ + P++Y V P G+++P
Sbjct: 3 ASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNI-GVVLPG 61
Query: 62 GTYDIIVSRKSDKLPPPGFECTDRFFIQSMA 92
T D+ V+ ++ + PP +C D+F +QS+A
Sbjct: 62 STCDVTVTMQAQREAPPDMQCKDKFLVQSVA 92
>ref|NP_914955.1| P0504E02.2 [Oryza sativa (japonica cultivar-group)]
Length = 394
Score = 73.9 bits (180), Expect = 8e-13
Identities = 38/120 (31%), Positives = 70/120 (57%), Gaps = 12/120 (10%)
Query: 5 EILQIEPAEL--TFLTEKKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQG 62
++ +I P EL TF +K+ C +HL+NK+ YVAF+++ + P++Y V P G+I+P+
Sbjct: 4 DLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNT-GVILPRS 62
Query: 63 TYDIIVSRKSDKLPPPGFECTDRFFIQSMALS--------VKDLFTENRGKRHVEEKELK 114
T D V+ ++ + PP + D+F +Q+ + V F++ G R++EE +L+
Sbjct: 63 TCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESG-RYIEESKLR 121
>dbj|BAD87304.1| putative VAP27 [Oryza sativa (japonica cultivar-group)]
Length = 380
Score = 73.9 bits (180), Expect = 8e-13
Identities = 38/120 (31%), Positives = 70/120 (57%), Gaps = 12/120 (10%)
Query: 5 EILQIEPAEL--TFLTEKKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQG 62
++ +I P EL TF +K+ C +HL+NK+ YVAF+++ + P++Y V P G+I+P+
Sbjct: 4 DLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNT-GVILPRS 62
Query: 63 TYDIIVSRKSDKLPPPGFECTDRFFIQSMALS--------VKDLFTENRGKRHVEEKELK 114
T D V+ ++ + PP + D+F +Q+ + V F++ G R++EE +L+
Sbjct: 63 TCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESG-RYIEESKLR 121
>ref|NP_172359.2| vesicle-associated membrane family protein / VAMP family protein
[Arabidopsis thaliana]
Length = 386
Score = 73.6 bits (179), Expect = 1e-12
Identities = 42/119 (35%), Positives = 68/119 (56%), Gaps = 12/119 (10%)
Query: 6 ILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQGT 63
+L I+P L F + K+ C + L N T +YVAF+++ + P+KY V P G ++ P+ T
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVG-VVAPKST 63
Query: 64 YDIIVSRKSDKLPPPGFECTDRFFIQSMALSVK--------DLFTENRGKRHVEEKELK 114
+ V ++ K PPP C D+F IQS A+S + +F++ GK H+EE +L+
Sbjct: 64 CEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGK-HIEENKLR 121
>gb|AAF99771.1| F22O13.31 [Arabidopsis thaliana] gi|25407055|pir||B86220 protein
F22O13.31 [imported] - Arabidopsis thaliana
Length = 432
Score = 73.6 bits (179), Expect = 1e-12
Identities = 42/119 (35%), Positives = 68/119 (56%), Gaps = 12/119 (10%)
Query: 6 ILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQGT 63
+L I+P L F + K+ C + L N T +YVAF+++ + P+KY V P G ++ P+ T
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVG-VVAPKST 63
Query: 64 YDIIVSRKSDKLPPPGFECTDRFFIQSMALSVK--------DLFTENRGKRHVEEKELK 114
+ V ++ K PPP C D+F IQS A+S + +F++ GK H+EE +L+
Sbjct: 64 CEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGK-HIEENKLR 121
>pir||T00738 hypothetical protein F22O13.33 - Arabidopsis thaliana
Length = 441
Score = 73.6 bits (179), Expect = 1e-12
Identities = 42/119 (35%), Positives = 68/119 (56%), Gaps = 12/119 (10%)
Query: 6 ILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQGT 63
+L I+P L F + K+ C + L N T +YVAF+++ + P+KY V P G ++ P+ T
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVG-VVAPKST 63
Query: 64 YDIIVSRKSDKLPPPGFECTDRFFIQSMALSVK--------DLFTENRGKRHVEEKELK 114
+ V ++ K PPP C D+F IQS A+S + +F++ GK H+EE +L+
Sbjct: 64 CEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGK-HIEENKLR 121
>gb|AAM62506.1| VAMP (vesicle-associated membrane protein)-associated protein-like
[Arabidopsis thaliana] gi|17104633|gb|AAL34205.1|
putative VAMP-associated protein [Arabidopsis thaliana]
gi|14334974|gb|AAK59664.1| putative VAMP
(vesicle-associated membrane protein)-associated protein
[Arabidopsis thaliana] gi|8809600|dbj|BAA97151.1| VAMP
(vesicle-associated membrane protein)-associated
protein-like [Arabidopsis thaliana]
gi|30695123|ref|NP_851144.1| vesicle-associated membrane
family protein / VAMP family protein [Arabidopsis
thaliana] gi|15238034|ref|NP_199529.1|
vesicle-associated membrane family protein / VAMP family
protein [Arabidopsis thaliana]
Length = 220
Score = 73.2 bits (178), Expect = 1e-12
Identities = 42/117 (35%), Positives = 67/117 (56%), Gaps = 11/117 (9%)
Query: 5 EILQIEPAELTFL--TEKKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQG 62
+++ I+P EL FL EK+ +C L + NKT NYVAF+++ + P+KY V P G+I P
Sbjct: 8 QLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNT-GVIQPWD 66
Query: 63 TYDIIVSRKSDKLPPPGFECTDRFFIQSMALS--------VKDLFTENRGKRHVEEK 111
+ I V+ ++ + PP +C D+F +QS + +D FT++ GK E K
Sbjct: 67 SCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECK 123
>gb|AAP13391.1| At2g45140 [Arabidopsis thaliana] gi|21594019|gb|AAM65937.1|
putative VAMP-associated protein [Arabidopsis thaliana]
gi|20260230|gb|AAM13013.1| putative VAMP-associated
protein [Arabidopsis thaliana] gi|4895238|gb|AAD32823.1|
putative VAMP (vesicle-associated membrane
protein)-associated protein [Arabidopsis thaliana]
gi|15225415|ref|NP_182039.1| vesicle-associated membrane
protein, putative / VAMP, putative [Arabidopsis
thaliana] gi|25363150|pir||H84886 probable
VAMP-associated protein [imported] - Arabidopsis
thaliana
Length = 239
Score = 72.8 bits (177), Expect = 2e-12
Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 12/120 (10%)
Query: 5 EILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQG 62
E+L I+P +L F E K+ C L+L NKT NYVAF+++ + P+KY V P G++ P+
Sbjct: 4 ELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNT-GVVHPRS 62
Query: 63 TYDIIVSRKSDKLPPPGFECTDRFFIQSMALS--------VKDLFTENRGKRHVEEKELK 114
+ +++V+ ++ K P +C D+F +Q + S ++F++ G R VEE +L+
Sbjct: 63 SSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHR-VEETKLR 121
>gb|AAP54536.1| putative vesicle-associated membrane protein [Oryza sativa
(japonica cultivar-group)] gi|37535894|ref|NP_922249.1|
putative vesicle-associated membrane protein [Oryza
sativa (japonica cultivar-group)]
gi|22324961|gb|AAM95688.1| putative vesicle-associated
membrane protein [Oryza sativa (japonica
cultivar-group)]
Length = 275
Score = 66.2 bits (160), Expect = 2e-10
Identities = 38/119 (31%), Positives = 67/119 (55%), Gaps = 10/119 (8%)
Query: 5 EILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQG 62
+++ ++P EL F E K+ C L + NKT VAF+++ + P+KY V P G++ P+
Sbjct: 6 DLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRP-NNGVVRPRS 64
Query: 63 TYDIIVSRKSDKLPPPGFECTDRFFIQSM----ALSVKDLFTE---NRGKRHVEEKELK 114
++V+ ++ + PP +C D+F +QS+ LS KD+ ++ VEE +LK
Sbjct: 65 ASVVVVTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVKLK 123
>gb|AAP54911.1| putative membrane protein [Oryza sativa (japonica
cultivar-group)] gi|37536644|ref|NP_922624.1| putative
membrane protein [Oryza sativa (japonica
cultivar-group)] gi|13876524|gb|AAK43500.1| putative
membrane protein [Oryza sativa (japonica
cultivar-group)]
Length = 233
Score = 62.8 bits (151), Expect = 2e-09
Identities = 32/87 (36%), Positives = 52/87 (58%), Gaps = 3/87 (3%)
Query: 6 ILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQGT 63
++ I P +LTFL E K +C L ++N + ++VAF+++ + P KY V P II P +
Sbjct: 7 LISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRP-NASIIQPWDS 65
Query: 64 YDIIVSRKSDKLPPPGFECTDRFFIQS 90
I ++ ++ K PP +C D+F IQS
Sbjct: 66 CTITITLQAQKEYPPDMQCKDKFLIQS 92
>ref|XP_475148.1| 'unknown protein, contains major sperm protein domain,PF00635'
[Oryza sativa (japonica cultivar-group)]
gi|49328137|gb|AAT58835.1| 'unknown protein, contains
major sperm protein domain,PF00635' [Oryza sativa
(japonica cultivar-group)]
Length = 477
Score = 62.8 bits (151), Expect = 2e-09
Identities = 34/118 (28%), Positives = 63/118 (52%), Gaps = 10/118 (8%)
Query: 6 ILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQGT 63
+++I P E+ F E KK C + L+NK+ YVAF+++ + P++Y V P G+I+P+ T
Sbjct: 8 LVEIHPGEIRFEFEVKKKSSCYVCLVNKSEEYVAFKVKTTSPKRYCVRPNV-GVILPRAT 66
Query: 64 YDIIVSRKSDKLPPPGFECTDRFFIQSMAL-------SVKDLFTENRGKRHVEEKELK 114
V ++ + PP + D+F +Q+ + + F R++EE +L+
Sbjct: 67 CVFTVIMQAQMIAPPDLQIRDKFLVQTTVVPFGTADEDIAPAFFSKEVGRYIEENKLR 124
>gb|AAC63657.1| unknown protein [Arabidopsis thaliana] gi|25412162|pir||E84629
hypothetical protein At2g23830 [imported] - Arabidopsis
thaliana gi|15224067|ref|NP_179963.1| vesicle-associated
membrane protein, putative / VAMP, putative [Arabidopsis
thaliana]
Length = 149
Score = 62.8 bits (151), Expect = 2e-09
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 12/124 (9%)
Query: 1 MDHAEILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGII 58
M + E+L+IEP L F E K+ C L+L NKT N VAF+++ + Y V P G+I
Sbjct: 1 MSNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNY-GLI 59
Query: 59 MPQGTYDIIVSRKSDKLPPPGFECTDRFFIQSMALS--------VKDLFTENRGKRHVEE 110
+P+ T ++V+ ++ K P + ++F IQS+ S +++F++ G VEE
Sbjct: 60 LPKSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESG-HVVEE 118
Query: 111 KELK 114
+L+
Sbjct: 119 TKLR 122
>emb|CAE01696.2| OSJNBa0010H02.20 [Oryza sativa (japonica cultivar-group)]
gi|50927837|ref|XP_473446.1| OSJNBa0010H02.20 [Oryza
sativa (japonica cultivar-group)]
Length = 244
Score = 61.6 bits (148), Expect = 4e-09
Identities = 40/119 (33%), Positives = 66/119 (54%), Gaps = 12/119 (10%)
Query: 6 ILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQGT 63
+L++ P+EL E +K C + L NKT YVAF+++ + P KY V GI+ P+ +
Sbjct: 5 LLRVHPSELKIPYEYKRKRSCCMQLTNKTNQYVAFKVKTTNPRKYSVR-HACGILPPRSS 63
Query: 64 YDIIVSRKSDKLPPPGFECTDRFFIQSMALS--------VKDLFTENRGKRHVEEKELK 114
DI V+ ++ + C D+F +QS+A+ V +LFT+ G R +EE +L+
Sbjct: 64 CDITVTMQAPVEMLSDYHCKDKFLVQSVAVGYGATMRDFVPELFTKAPG-RVIEEFKLR 121
>ref|NP_175538.1| vesicle-associated membrane protein, putative / VAMP, putative
[Arabidopsis thaliana]
Length = 289
Score = 61.6 bits (148), Expect = 4e-09
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 5 EILQIEPAELTFLTE--KKDFCKLHLINKTTNYVAFRLRLSKPEKYGVTPREGGIIMPQG 62
E+L I+P ++ F E KK C L+L NKT NYVAF+ + + +KY V P G+++P+
Sbjct: 127 ELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNV-GVVLPRS 185
Query: 63 TYDIIVSRKSDKLPPPGFECTDRFFIQSMAL----SVKDLFTENRGK---RHVEEKELK 114
+ +++V ++ K P +C D+ Q + + KD+ +E K EE LK
Sbjct: 186 SCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 244
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.139 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,622,439
Number of Sequences: 2540612
Number of extensions: 7885180
Number of successful extensions: 13822
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 13732
Number of HSP's gapped (non-prelim): 83
length of query: 114
length of database: 863,360,394
effective HSP length: 90
effective length of query: 24
effective length of database: 634,705,314
effective search space: 15232927536
effective search space used: 15232927536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0336.10