BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0330.2
(1649 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF24529.1| F7F22.15 [Arabidopsis thaliana] 1539 0.0
gb|AAF24531.1| F7F22.17 [Arabidopsis thaliana] 1374 0.0
dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis t... 1160 0.0
gb|AAF79809.1| T32E20.9 [Arabidopsis thaliana] 1044 0.0
gb|AAR00600.1| putative reverse transcriptase [Oryza sativa (jap... 804 0.0
pir||D84513 probable retroelement pol polyprotein [imported] - A... 723 0.0
gb|AAD19780.2| hypothetical protein [Arabidopsis thaliana] 679 0.0
emb|CAD39928.2| OSJNBa0091C12.6 [Oryza sativa (japonica cultivar... 675 0.0
emb|CAD39877.2| OSJNBb0058J09.16 [Oryza sativa (japonica cultiva... 650 0.0
emb|CAE03895.1| OSJNBb0026I12.3 [Oryza sativa (japonica cultivar... 639 0.0
gb|AAG52026.1| polyprotein, putative; 77260-80472 [Arabidopsis t... 618 e-175
pir||T12085 reverse transcriptase homolog - fava bean (fragment)... 588 e-166
gb|AAF63114.1| Hypothetical protein [Arabidopsis thaliana] gi|25... 579 e-163
emb|CAD39882.2| OSJNBb0067G11.5 [Oryza sativa (japonica cultivar... 551 e-155
gb|AAD23707.1| putative retroelement pol polyprotein [Arabidopsi... 541 e-152
emb|CAB81136.1| putative athila transposon protein [Arabidopsis ... 535 e-150
gb|AAV43951.1| putative polyprotein [Oryza sativa (japonica cult... 527 e-147
gb|AAT81690.1| putative reverse transcriptase [Oryza sativa (jap... 527 e-147
gb|AAV43847.1| putative polyprotein [Oryza sativa (japonica cult... 523 e-146
emb|CAD40178.2| OSJNBa0061A09.17 [Oryza sativa (japonica cultiva... 460 e-127
>gb|AAF24529.1| F7F22.15 [Arabidopsis thaliana]
Length = 1862
Score = 1539 bits (3984), Expect = 0.0
Identities = 817/1703 (47%), Positives = 1108/1703 (64%), Gaps = 98/1703 (5%)
Query: 3 EDPHAHMERFIRNCNTYRVMNVPSEAIRLSLFPFSLKDAAEDWLNSQPQGSLTTWEDLAE 62
EDP H++ F R CN ++ V + +L LFPFSL D A W + P S+TTW+D +
Sbjct: 178 EDPLDHLDEFDRLCNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLPHDSITTWDDCKK 237
Query: 63 KFTTRFFPRSLLRKLKNDIMTFAQSTDENLYEAWEHFKKLLRKCPQHNLTQAECVAKFYD 122
F ++FF + +L+N+I F+Q T E+ EAWE FK +C H T+A ++ Y
Sbjct: 238 AFLSKFFSNARTARLRNEISGFSQKTGESFCEAWERFKGYTNQCSHHGFTKASLLSTLYR 297
Query: 123 GLLYSSRFGLDAASSGEFDALSPQVGYNLIEKMAMRAMN-SEN-ERQIRRSSFEVETYDK 180
G+L R LD AS+G F + G+ L+E +A N +EN +R +R ++ + + K
Sbjct: 298 GVLPRIRMLLDTASNGNFQNKDVEEGWELVENLAQSNGNYNENCDRTVRGTADSDDKHRK 357
Query: 181 LI-ASNKQLSEEVAEMRKHI------KETKSIGARVTCLECKFCGESHDSNQCTVNDDDS 233
I A N +L + KH+ ++ + LE ++ N+ +
Sbjct: 358 EIKALNDKLDRILLSQHKHVHFLVDDEQYEVQDGEGNQLEEVSYINNNQGGYKGYNNFKT 417
Query: 234 KVRTLTQGGKTPTSEQDPLDQPQIVVKTVGKKSLEELIERFIDHTSSNYKSHDMAIKSLE 293
L+ + QD + PQ + + F+ + + ++ + K+++
Sbjct: 418 NNPNLSYRSTNVANPQDQVYPPQ---------QQQSQNKPFVPYNQATKQTSQLPGKAVQ 468
Query: 294 SKLGHLAKQMSDNHQGKFSSETLTLIEQENTAVVSTRSGRVLHEPEEKIEGDKNEEAEVE 353
+ + H GK L E+ T + +K + DK + +E
Sbjct: 469 NPKEYA--HAITLHSGK----ALPTREEPKTVTEDSEDQDGEDLSLKKDQADKPLDLSLE 522
Query: 354 RDEGVMEERAREP---TRTRVVNTHTPELRKIPFPKALVKKNLDK*FSKFLEVFKKLHIN 410
+ + +++ +P + TR PK + KN +K + +
Sbjct: 523 QPLDLSLQQSLDPPLDSFTRPTTRPVIPAASPTAPKPVAVKNKEK-----------VELR 571
Query: 411 IPFSEALEQMPIYAKFMKDILSKRRKLSEVDETILMTEECSAILQRKM-PKKRRDPGSFT 469
IP +AL +P KF+KD++ +R + EV ++++ ECSAI+Q+K+ PKK DPGSFT
Sbjct: 572 IPLVDALALIPDSHKFLKDLIVER--IQEVQGMVVLSHECSAIIQKKIIPKKLSDPGSFT 629
Query: 470 IPVEIEGLTVVEALCDLGASINLMPLSMFKRLNLGEVTPTMISLQMADRSLKTPYGIIED 529
+P + L LCDLGAS++LMPLS+ KRL + ISL +ADRS++ P+G++E+
Sbjct: 630 LPCSLGPLAFNRCLCDLGASVSLMPLSVAKRLGFTQYKSCNISLILADRSVRIPHGLLEN 689
Query: 530 VVVKVDKFVFPVDFVILDMEEDSKVPLILGRPFLATGEAEIKVAKGTLTLKVGED-EVLF 588
+ +++ P DFV+L+M+E+ K PLILGRPFLAT A I V KG + L +G+D + F
Sbjct: 690 LPIRIGAVEIPTDFVVLEMDEEPKDPLILGRPFLATAGAMIDVKKGKIDLNLGKDFRMTF 749
Query: 589 NIFDSLKHRADE-EVFRCEVVDELVCEEFVRISIKDPLETTIMEG-----LEIEDQNLER 642
++ D++K E ++F E +D+L E ++ +D L + + + L +E ++
Sbjct: 750 DVKDAMKKPTIEGQLFWIEEMDQLADELLEELAEEDHLNSALTKSGEDGFLHLETLGYQK 809
Query: 643 ELDSL--------YHEVNATLSQLECVSSLA----------TKSIWKEELTRDE-EIPI- 682
LDS + E+N +++ +S T S L+ DE PI
Sbjct: 810 LLDSHKAMEESEPFEELNGPATEVMVMSEEGSTRVQPALSRTYSSNHSTLSTDEPREPII 869
Query: 683 ----------EEKSELKPLPSSLKYAYLEEGENKPVILNSALTPLEEEKLLRVLRDHKSA 732
K +LKPLP L+YA+L PVI+N+ L E LL LR ++ A
Sbjct: 870 STSDDWSELKAPKVDLKPLPKGLRYAFLGPNSTYPVIINAELNSDEVNLLLSELRKYRRA 929
Query: 733 LGWTIDDIKGISPAICMHKILLEENYKPIVQPQRRLNPSMKDVVRKEIIKLLDAGVIYPI 792
+G+++ DIKGISP++C H+I LE ++P RRLNP++K+VV+KEI+KLLDAGVIYPI
Sbjct: 930 IGYSLSDIKGISPSLCNHRIHLENESYSSIEPHRRLNPNLKEVVKKEILKLLDAGVIYPI 989
Query: 793 SDSEWVSPVQVVPKKGGITVVANENNELIPTRQVTKWRVCIDYRRLNSVTRKDHFPLPFI 852
SDS WVSPV VPKK G+ VV NE +ELIPTR +T R+CIDYR+LN+ +RKDHFPLPFI
Sbjct: 990 SDSTWVSPVHCVPKKDGMIVVKNEKDELIPTRTITGHRMCIDYRKLNAASRKDHFPLPFI 1049
Query: 853 DQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQEKTAFTCPYDVFAYKRMPFGLCNAPATF 912
DQML++LA H YYCFLDGYSG+ QI + P DQEKT FTCPY FAYKRMPFGLCNAPATF
Sbjct: 1050 DQMLERLANHPYYCFLDGYSGFFQIPIHPNDQEKTTFTCPYGTFAYKRMPFGLCNAPATF 1109
Query: 913 QRCMFAIFSDLIETCIEIFMDDFSVFGPNFDACLGNLALVLKRCQETNLVLNWEKCHFMV 972
QRCM +IFSDLI+ +E+FMDDFSV+GP+F +CL NL VL RC+ETNLVLNWEKCHFMV
Sbjct: 1110 QRCMTSIFSDLIKEMVEVFMDDFSVYGPSFSSCLLNLGRVLTRCEETNLVLNWEKCHFMV 1169
Query: 973 RDGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKP 1032
++GIVLGHK+SE+GIEVD+ K+EV+ +L PP +K IRSFLGHAGFYRRFIKDFSK+A+P
Sbjct: 1170 KEGIVLGHKISEKGIEVDKGKVEVMMQLQPPKTVKDIRSFLGHAGFYRRFIKDFSKIARP 1229
Query: 1033 MTNLLEKEAPFTFDENCLKAFESIKKSLVTAPVIVAPDWSLPFEIMCDASDLALGAVLCQ 1092
+T LL KE F FD++CLK+F++IK +LV+APV+ AP+W PFEIMCDASD A+GAVL Q
Sbjct: 1230 LTRLLCKETEFKFDDDCLKSFQTIKDALVSAPVVRAPNWDYPFEIMCDASDYAVGAVLGQ 1289
Query: 1093 KKERVLYVIYYASTVLNEAQRNYTTTEKELLGVVFACEKFRPYILGFKVVVHTDHAALRH 1152
K ++ L+VIYYAS L++AQ Y TTEKELL VVFA EKFR Y++G KV V+TDHAALRH
Sbjct: 1290 KIDKKLHVIYYASRTLDDAQGRYATTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAALRH 1349
Query: 1153 LFAKQDSKPRLIRWVLLLQEFDLEIIDRRGKDNGVADHLSRLEGGACSPIPIQEEFPDEK 1212
L+AK+D+KPRL+RW+LLLQEFD+EI+D++G +NG ADHLSR+ P+ I + P+E+
Sbjct: 1350 LYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGAADHLSRMR--IEEPLLIDDSMPEEQ 1407
Query: 1213 LLAV----------------STEEPLPWYVHFANFRVAGLIPHDLTWQQKKKFLHDAKSY 1256
L+ V + E PWY N+ G+ P +LT ++KKF D Y
Sbjct: 1408 LMVVEFFGKSYSGKEFHQLNAVEGESPWYADHVNYLACGVEPPNLTSYERKKFFRDIHHY 1467
Query: 1257 LWDDPFLFKICSDGVIRRCIPEVNFEKILWYCHGSSYGGHFSGERTAAKVLQSGFYWPTL 1316
WD+P+L+ +C D + RRC+ E E IL +CHGS+YGGHF+ +T +K+LQ+GF+WPT+
Sbjct: 1468 YWDEPYLYTLCKDKIYRRCVSEDEVEGILLHCHGSAYGGHFATFKTVSKILQAGFWWPTM 1527
Query: 1317 NRDSRAFVESCDRCQRTGNISRRNEMPLKNILEIELFDVWGIDFMGPFPPSFGCQYILLA 1376
+D++ FV CD CQR GNISRRNEMP ILE+E+FDVWGIDFMGPFP S+G +YIL+A
Sbjct: 1528 FKDAQEFVSKCDSCQRKGNISRRNEMPQNPILEVEIFDVWGIDFMGPFPSSYGNKYILVA 1587
Query: 1377 VDYVSKWVEAAALSTNDSKVVVAFLKKNIFTRFGVPRAIISDGGTHFCNRAFESLLEKYG 1436
VDYVSKWVEA A TND+KVV+ K IF RFGVPR +ISDGG HF N+ FE+LL+K+G
Sbjct: 1588 VDYVSKWVEAIASPTNDAKVVLKLFKTIIFPRFGVPRVVISDGGKHFINKVFENLLKKHG 1647
Query: 1437 VKHKVSTPYHPQTSGQVEISNRELKRILEKVVDSSRKDWSRKLDDALWAYRTAFKTPIGT 1496
VKHKV+TPY+PQTSGQVEISNRE+K ILEK V +RKDWS KLDDALWAYRT FKTPIGT
Sbjct: 1648 VKHKVATPYNPQTSGQVEISNREIKTILEKTVGITRKDWSAKLDDALWAYRTTFKTPIGT 1707
Query: 1497 SPFHLVFGKACHLPVELEHKAYWAIRKLNFDWKVASEKRLLQLNELDEFRLRAYESASIY 1556
+PF+L++GK+CHLPVELE+KA WA++ LNFD K A EKRL+QL++LDE RL AYES+ IY
Sbjct: 1708 TPFNLLYGKSCHLPVELEYKAMWAVKLLNFDIKTAEEKRLIQLSDLDEIRLEAYESSKIY 1767
Query: 1557 KEKTKKWHDRKILNREFVSGQLVLLFNSRLRLFPGKLKSRWSGPFVVKRVFPHGAVEVEN 1616
KE+TK +HD+KI+ ++F G VLLFNSRL+LFPGKLKSRWSGPF + V P+GAV +
Sbjct: 1768 KERTKLFHDKKIITKDFQVGDQVLLFNSRLKLFPGKLKSRWSGPFCITEVRPYGAVTLTG 1827
Query: 1617 PETKNTFTVNGQRLKVYHGGEVL 1639
FTVNGQRLK Y ++L
Sbjct: 1828 --KSGDFTVNGQRLKKYLADQIL 1848
>gb|AAF24531.1| F7F22.17 [Arabidopsis thaliana]
Length = 1799
Score = 1374 bits (3556), Expect = 0.0
Identities = 707/1301 (54%), Positives = 923/1301 (70%), Gaps = 83/1301 (6%)
Query: 377 PELRKIPFPKALVKKNLDK*FSKFLEVFKKLHINIPFSEALEQMPIYAKFMKDILSKRRK 436
P ++PFP K DK + F + K++ + IP +AL +P KF+KD++ +R
Sbjct: 530 PYKSQLPFPGRHKKALADKYRAMFAKNIKEVELRIPLVDALALIPDSHKFLKDLIVER-- 587
Query: 437 LSEVDETILMTEECSAILQRKM-PKKRRDPGSFTIPVEIEGLTVVEALCDLGASINLMPL 495
+ EV ++++ ECSAI+Q+K+ PKK DPGSFT+P + L LCDLGAS++LMPL
Sbjct: 588 IQEVQGMVVLSHECSAIIQKKIIPKKLSDPGSFTLPCSLGPLAFNRCLCDLGASVSLMPL 647
Query: 496 SMFKRLNLGEVTPTMISLQMADRSLKTPYGIIEDVVVKVDKFVFPVDFVILDMEEDSKVP 555
S+ KRL + ISL +ADRS++ P+G++E++ +++ P DFV+L+M+E+ K P
Sbjct: 648 SVAKRLGFTQYKSCNISLILADRSVRIPHGLLENLPIRIGAVEIPTDFVVLEMDEEPKDP 707
Query: 556 LILGRPFLATGEAEIKVAKGTLTLKVGED-EVLFNIFDSLKHRADE-EVFRCEVVDELVC 613
LILGRPFLAT A I V KG + L +G+D + F++ D++K E ++F E +D+L
Sbjct: 708 LILGRPFLATAGAMIDVKKGKIDLNLGKDFRMTFDVKDAMKKPTIEGQLFWIEEMDQLAD 767
Query: 614 EEFVRISIKDPLETTIMEG-----LEIEDQNLERELDSL--------YHEVNATLSQLEC 660
E ++ +D L + + + L +E ++ LDS + E+N +++
Sbjct: 768 ELLEELAEEDHLNSALTKSGEDGFLHLETLGYQKLLDSHKAMEESEPFEELNGPATEVMV 827
Query: 661 VSSLA----------TKSIWKEELTRDEE----IPIEE--------KSELKPLPSSLKYA 698
+S T S L+ DE IP + K +LKPLP L+YA
Sbjct: 828 MSEEGSTRVQPALSRTYSSNHSTLSTDEPREPIIPTSDDWSELKAPKVDLKPLPKGLRYA 887
Query: 699 YLEEGENKPVILNSALTPLEEEKLLRVLRDHKSALGWTIDDIKGISPAICMHKILLEENY 758
+L PVI+N+ L E LL L+ ++ A+G+++ DIKGISP++C H+I LE
Sbjct: 888 FLGPNSTYPVIINAELNSDEVNLLLSELKKYRRAIGYSLSDIKGISPSLCNHRIHLENES 947
Query: 759 KPIVQPQRRLNPSMKDVVRKEIIKLLDAGVIYPISDSEWVSPVQVVPKKGGITVVANENN 818
++PQRRLNP++K+VV+KEI+KLLDAGVIYPISD + VPKK G+TVV NE +
Sbjct: 948 YSSIEPQRRLNPNLKEVVKKEILKLLDAGVIYPISD------MHCVPKKDGMTVVKNEKD 1001
Query: 819 ELIPTRQVTKWRVCIDYRRLNSVTRKDHFPLPFIDQMLDKLAGHQYYCFLDGYSGYNQIC 878
ELIPTR +T R+CIDYR+LN+ +RKDHFPLPFIDQML++LA H YYCFLDGY+G+ QI
Sbjct: 1002 ELIPTRTITGHRMCIDYRKLNAASRKDHFPLPFIDQMLERLANHPYYCFLDGYNGFFQIP 1061
Query: 879 VAPEDQEKTAFTCPYDVFAYKRMPFGLCNAPATFQRCMFAIFSDLIETCIEIFMDDFSVF 938
+ P DQEKT FTCPY FAYKRMPFGLCNAPATFQRCM +IFSDLIE +E+FMDDFSV+
Sbjct: 1062 IHPNDQEKTTFTCPYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSVY 1121
Query: 939 GPNFDACLGNLALVLKRCQETNLVLNWEKCHFMVRDGIVLGHKVSERGIEVDRAKIEVIE 998
GP+F +CL NL VL RC+ETNLVLNWEKCHFMV++GIVLGHK+SE+GIEVD+ K+EV+
Sbjct: 1122 GPSFSSCLLNLGRVLTRCEETNLVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGKVEVMM 1181
Query: 999 KLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKPMTNLLEKEAPFTFDENCLKAFESIKK 1058
+L PP +K IRSFLGHAGFYRRFIKDFSK+A+P+T LL KE F FD++CLK+F++IK
Sbjct: 1182 QLQPPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTRLLCKETEFKFDDDCLKSFQTIKD 1241
Query: 1059 SLVTAPVIVAPDWSLPFEIMCDASDLALGAVLCQKKERVLYVIYYASTVLNEAQRNYTTT 1118
+LV+APV+ AP+W PFEIMCDASD A+GAVL QK ++ L+VIYYAS L++AQ Y TT
Sbjct: 1242 ALVSAPVVRAPNWDYPFEIMCDASDYAVGAVLGQKIDKKLHVIYYASRTLDDAQGRYATT 1301
Query: 1119 EKELLGVVFACEKFRPYILGFKVVVHTDHAALRHLFAKQDSKPRLIRWVLLLQEFDLEII 1178
EKELL VVFA EKFR Y++G KV V+TDHAALRHL+AK+D+KPRL+RW+LLLQEFD+EI+
Sbjct: 1302 EKELLVVVFAFEKFRSYLVGSKVTVYTDHAALRHLYAKKDTKPRLLRWILLLQEFDMEIV 1361
Query: 1179 DRRGKDNGVADHLSRLEGGACSPIPIQEEFPDEKLLAVSTEEPLPWYVHFANFRVAGLIP 1238
D++G +NG ADHLSR+ P+ I + P+E+L+ V F +G
Sbjct: 1362 DKKGIENGAADHLSRMR--IEEPLLIDDSMPEEQLMVVE----------FFGKSYSG--- 1406
Query: 1239 HDLTWQQKKKFLHDAKSYLWDDPFLFKICSDGVIRRCIPEVNFEKILWYCHGSSYGGHFS 1298
K H + + P+ RC+ E E IL +CHGS+YGGHF+
Sbjct: 1407 ---------KEFHQLNAVEGESPW-----------RCVSEDEVEGILLHCHGSAYGGHFA 1446
Query: 1299 GERTAAKVLQSGFYWPTLNRDSRAFVESCDRCQRTGNISRRNEMPLKNILEIELFDVWGI 1358
+T +K+LQ+GF+WPT+ +D++ FV CD CQR GNISRRNEMP ILE+E+FDVWGI
Sbjct: 1447 TFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKGNISRRNEMPQNPILEVEIFDVWGI 1506
Query: 1359 DFMGPFPPSFGCQYILLAVDYVSKWVEAAALSTNDSKVVVAFLKKNIFTRFGVPRAIISD 1418
DFMGPFP S+G +YIL+AVDYVSKWVEA A TND+KVV+ K IF RFGVPR +ISD
Sbjct: 1507 DFMGPFPSSYGNKYILVAVDYVSKWVEAIASPTNDAKVVLKLFKTIIFPRFGVPRVVISD 1566
Query: 1419 GGTHFCNRAFESLLEKYGVKHKVSTPYHPQTSGQVEISNRELKRILEKVVDSSRKDWSRK 1478
GG HF N+ FE+LL+K+GVKHKV+TPY+PQTSGQVEISNRE+K ILEK V +RKDWS K
Sbjct: 1567 GGKHFINKVFENLLKKHGVKHKVATPYNPQTSGQVEISNREIKTILEKTVGITRKDWSAK 1626
Query: 1479 LDDALWAYRTAFKTPIGTSPFHLVFGKACHLPVELEHKAYWAIRKLNFDWKVASEKRLLQ 1538
LDDALWAYRTAFKTPIGT+PF+L++GK+CHLPVELE+KA WA++ LNFD K A EKRL+Q
Sbjct: 1627 LDDALWAYRTAFKTPIGTTPFNLLYGKSCHLPVELEYKAMWAVKLLNFDIKTAEEKRLIQ 1686
Query: 1539 LNELDEFRLRAYESASIYKEKTKKWHDRKILNREFVSGQLVLLFNSRLRLFPGKLKSRWS 1598
L++LDE RL AYES+ IYKE+TK +HD+KI+ ++F G VLLFNSRL+LFPGKLKSRWS
Sbjct: 1687 LSDLDEIRLEAYESSKIYKERTKLFHDKKIITKDFQFGVQVLLFNSRLKLFPGKLKSRWS 1746
Query: 1599 GPFVVKRVFPHGAVEVENPETKNTFTVNGQRLKVYHGGEVL 1639
GPF + V P+GAV + FTVNGQRLK Y ++L
Sbjct: 1747 GPFCITEVRPYGAVTLAG--KSGDFTVNGQRLKKYLADQIL 1785
Score = 132 bits (333), Expect = 8e-29
Identities = 70/200 (35%), Positives = 108/200 (54%), Gaps = 3/200 (1%)
Query: 3 EDPHAHMERFIRNCNTYRVMNVPSEAIRLSLFPFSLKDAAEDWLNSQPQGSLTTWEDLAE 62
EDP H++ F R CN ++ V + +L LFPFSL D A W + P S+TTW+D +
Sbjct: 43 EDPLDHLDEFDRLCNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLPHDSITTWDDCKK 102
Query: 63 KFTTRFFPRSLLRKLKNDIMTFAQSTDENLYEAWEHFKKLLRKCPQHNLTQAECVAKFYD 122
F ++FF + +L+N+I F+Q T E+ EAWE FK +CP H T+A ++ Y
Sbjct: 103 VFLSKFFSNARTARLRNEISGFSQKTGESFCEAWERFKGYTNQCPHHGFTKASLLSTLYR 162
Query: 123 GLLYSSRFGLDAASSGEFDALSPQVGYNLIEKMAMR--AMNSENERQIRRSSFEVETYDK 180
G+L R LD AS+G F + G+ L+E +A N + +R +R ++ + + K
Sbjct: 163 GVLPRIRMLLDTASNGNFQNKDVEEGWELVENLAQSDGNYNEDCDRTVRGTADSDDKHRK 222
Query: 181 LI-ASNKQLSEEVAEMRKHI 199
I A N +L + KH+
Sbjct: 223 EIKALNDKLDRILLSQHKHV 242
>dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 897
Score = 1160 bits (3000), Expect = 0.0
Identities = 567/932 (60%), Positives = 706/932 (74%), Gaps = 49/932 (5%)
Query: 708 VILNSALTPLEEEKLLRVLRDHKSALGWTIDDIKGISPAICMHKILLEENYKPIVQPQRR 767
+I+N+ L E L LR ++ A+G+++ DIKGISP++C H+I LE ++PQRR
Sbjct: 1 MIINAELNSDEVNLQLSELRKYRRAIGYSLSDIKGISPSLCNHRIHLENESYSSIEPQRR 60
Query: 768 LNPSMKDVVRKEIIKLLDAGVIYPISDSEWVSPVQVVPKKGGITVVANENNELIPTRQVT 827
LNP+ DAGVIYPISDS WVS V VPKKGG+TVV NE +ELIPTR +T
Sbjct: 61 LNPNF------------DAGVIYPISDSTWVSLVYCVPKKGGMTVVKNEKDELIPTRTIT 108
Query: 828 KWRVCIDYRRLNSVTRKDHFPLPFIDQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQEKT 887
R+CIDYR+LN+ +RKDHFPLPFIDQML++LA H YYCFLDGYSG+ QI + P DQEKT
Sbjct: 109 GHRMCIDYRKLNAASRKDHFPLPFIDQMLERLANHPYYCFLDGYSGFFQIPIHPNDQEKT 168
Query: 888 AFTCPYDVFAYKRMPFGLCNAPATFQRCMFAIFSDLIETCIEIFMDDFSVFGPNFDACLG 947
FTCPY FAYKRMPFGLCNAPATFQRCM +IFSDLIE +E+FMDDFS +GP+F +CL
Sbjct: 169 TFTCPYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSGYGPSFSSCLL 228
Query: 948 NLALVLKRCQETNLVLNWEKCHFMVRDGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIK 1007
NL VL RC+ETNLVLNWEKCHFMV++GIVLGHK+SE+GIEVD+ K+EV+ +L PP +K
Sbjct: 229 NLGRVLTRCEETNLVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGKVEVMMQLQPPKTVK 288
Query: 1008 GIRSFLGHAGFYRRFIKDFSKLAKPMTNLLEKEAPFTFDENCLKAFESIKKSLVTAPVIV 1067
IRSFLGHAGFYRRFIKDFSK+ +P+T LL KE F FDE+CLK+F++IK +LV+APV+
Sbjct: 289 EIRSFLGHAGFYRRFIKDFSKIVRPLTRLLCKETEFEFDEDCLKSFQTIKDALVSAPVVR 348
Query: 1068 APDWSLPFEIMCDASDLALGAVLCQKKERVLYVIYYASTVLNEAQRNYTTTEKELLGVVF 1127
AP+W PFEIMCDASD +GAVL QK ++ L+VIYYAS L++AQ Y TTEKELL VVF
Sbjct: 349 APNWDYPFEIMCDASDYVVGAVLGQKIDKKLHVIYYASRTLDDAQGRYATTEKELLAVVF 408
Query: 1128 ACEKFRPYILGFKVVVHTDHAALRHLFAKQDSKPRLIRWVLLLQEFDLEIIDRRGKDNGV 1187
A EKFR Y++G KV V+TDHAALRHL+AK+D+KPRL+RW+LLLQEFD+EI+D++G +NG
Sbjct: 409 AFEKFRSYLVGSKVTVYTDHAALRHLYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGA 468
Query: 1188 ADHLSRLEGGACSPIPIQEEFPDEKLLAVSTEEPLPWYVHFANFRVAGLIPHDLTWQQKK 1247
ADHL R+ P+PI + P+E+L+ V F +G
Sbjct: 469 ADHLLRMR--IEEPLPIDDSMPEEQLMV----------VEFFGKSYSG------------ 504
Query: 1248 KFLHDAKSYLWDDPFLFKICSDGVIRRCIPEVNFEKILWYCHGSSYGGHFSGERTAAKVL 1307
K H + P+ RC+ E E IL +CH S+YGGHF+ +T +K+L
Sbjct: 505 KEFHQLNDVEGESPW-----------RCVSEDEVEGILLHCHCSAYGGHFATFKTVSKIL 553
Query: 1308 QSGFYWPTLNRDSRAFVESCDRCQRTGNISRRNEMPLKNILEIELFDVWGIDFMGPFPPS 1367
Q+GF+WPT+ +D++ FV CD CQR NISR NEMP I+E+E+FDVWGIDFMG FP S
Sbjct: 554 QAGFWWPTMFKDAQEFVSKCDSCQRKDNISRINEMPQNPIVEVEIFDVWGIDFMGLFPSS 613
Query: 1368 FGCQYILLAVDYVSKWVEAAALSTNDSKVVVAFLKKNIFTRFGVPRAIISDGGTHFCNRA 1427
+G +YIL+A+DYVSKWVEA A+ TND+KVV+ K IF RFGVPR +ISDGG HF N+
Sbjct: 614 YGNKYILVAIDYVSKWVEAIAIPTNDAKVVLKLFKTIIFPRFGVPRVVISDGGKHFINKV 673
Query: 1428 FESLLEKYGVKHKVSTPYHPQTSGQVEISNRELKRILEKVVDSSRKDWSRKLDDALWAYR 1487
FE+LL+K+GVKHKV+TPYHPQTSGQVEIS+RE+K ILEK V +RKDWS KLDDALWAYR
Sbjct: 674 FENLLKKHGVKHKVATPYHPQTSGQVEISDREIKTILEKTVGITRKDWSAKLDDALWAYR 733
Query: 1488 TAFKTPIGTSPFHLVFGKACHLPVELEHKAYWAIRKLNFDWKVASEKRLLQLNELDEFRL 1547
TAFKTPIGT+PF++++GK+CHLPVELE+KA WA++ LNFD K A EKRL+QL++LDE RL
Sbjct: 734 TAFKTPIGTTPFNILYGKSCHLPVELEYKAMWAVKLLNFDIKTAEEKRLIQLSDLDEIRL 793
Query: 1548 RAYESASIYKEKTKKWHDRKILNREFVSGQLVLLFNSRLRLFPGKLKSRWSGPFVVKRVF 1607
AYES+ IYKE+TK +HD+KI+ ++F G VLLFNSRL+LFPGKLKSRWSGPF + +V
Sbjct: 794 EAYESSKIYKERTKLFHDKKIITKDFQVGDQVLLFNSRLKLFPGKLKSRWSGPFCITKVR 853
Query: 1608 PHGAVEVENPETKNTFTVNGQRLKVYHGGEVL 1639
P+GAV + FTVNGQRLK Y ++L
Sbjct: 854 PYGAVTLAG--KSGDFTVNGQRLKKYLADQIL 883
>gb|AAF79809.1| T32E20.9 [Arabidopsis thaliana]
Length = 1586
Score = 1044 bits (2700), Expect = 0.0
Identities = 519/925 (56%), Positives = 647/925 (69%), Gaps = 115/925 (12%)
Query: 709 ILNSALTPLEEEKLLRVLRDHKSALGWTIDDIKGISPAICMHKILLEENYKPIVQPQRRL 768
I N+ P E + + A+G+++DDIKGISP +C H+I LE ++PQRRL
Sbjct: 757 ITNTMKKPTIEGNIFWIEEMDMKAIGYSLDDIKGISPTLCTHRIHLENESYSSIEPQRRL 816
Query: 769 NPSMKDVVRKEIIKLLDAGVIYPISDSEWVSPVQVVPKKGGITVVANENNELIPTRQVTK 828
NP++K+VV+KEI+KLLDAGVIYPISDS WVSPV VPKKGG+TVV N +ELIPTR +T
Sbjct: 817 NPNLKEVVKKEILKLLDAGVIYPISDSTWVSPVHCVPKKGGMTVVKNSKDELIPTRTITG 876
Query: 829 WRVCIDYRRLNSVTRKDHFPLPFIDQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQEKTA 888
R+CI+YR+LN +RK+HFPLPFID ML++LA H YYCFLD YSG+ QI + P DQ KT
Sbjct: 877 HRMCIEYRKLNVASRKEHFPLPFIDHMLERLANHPYYCFLDSYSGFFQIPIHPNDQGKTT 936
Query: 889 FTCPYDVFAYKRMPFGLCNAPATFQRCMFAIFSDLIETCIEIFMDDFSVFGPNFDACLGN 948
FTCPY FAYKRMPFGLCNAPATFQRCM +IFSDLIE +E+FMDDFSV+G +F +CL N
Sbjct: 937 FTCPYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSVYGSSFSSCLLN 996
Query: 949 LALVLKRCQETNLVLNWEKCHFMVRDGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIKG 1008
L VLKRC+ETNLVLNWEKCHFMVR+GIVLG K+SE GIEVD+AKI+V+ +L PP +K
Sbjct: 997 LCRVLKRCEETNLVLNWEKCHFMVREGIVLGRKISEEGIEVDKAKIDVMMQLQPPKTVKD 1056
Query: 1009 IRSFLGHAGFYRRFIKDFSKLAKPMTNLLEKEAPFTFDENCLKAFESIKKSLVTAPVIVA 1068
IRSFLGHAGFYR FIKDFSKLA+P+T LL KE F FD+ CL AF+ IK++L+TAP++ A
Sbjct: 1057 IRSFLGHAGFYRIFIKDFSKLARPLTRLLCKETEFAFDDECLTAFKLIKEALITAPIVQA 1116
Query: 1069 PDWSLPFEIMCDASDLALGAVLCQKKERVLYVIYYASTVLNEAQRNYTTTEKELLGVVFA 1128
P+W PFEI+ +++AQ Y TTEKELL VVFA
Sbjct: 1117 PNWDFPFEII----------------------------TMDDAQVRYATTEKELLAVVFA 1148
Query: 1129 CEKFRPYILGFKVVVHTDHAALRHLFAKQDSKPRLIRWVLLLQEFDLEIIDRRGKDNGVA 1188
EKFR Y++G KV ++TDHAALRH++AK+D+KPRL+RW+LLLQEFD+EI+D++G +N
Sbjct: 1149 FEKFRSYLVGSKVTIYTDHAALRHIYAKKDTKPRLLRWILLLQEFDMEIVDKKGIEN--- 1205
Query: 1189 DHLSRLEGGACSPIPIQEEFPDEKLLAVSTEEPLPWYVHFANFRVAGLIPHDLTWQQKKK 1248
E LPWY N+ V+G P +L+ +KKK
Sbjct: 1206 -------------------------------EKLPWYADHVNYLVSGEEPPNLSSYEKKK 1234
Query: 1249 FLHDAKSYLWDDPFLFKICSDGVIRRCIPEVNFEKILWYCHGSSYGGHFSGERTAAKVLQ 1308
F D + WD+P+L+ +C D + R C+ E E IL +CHG +YGGHF+ +T +K+LQ
Sbjct: 1235 FFKDINHFYWDEPYLYTLCKDKIYRTCVSEDEIEGILLHCHGFAYGGHFATFKTMSKILQ 1294
Query: 1309 SGFYWPTLNRDSRAFVESCDRCQRTGNISRRNEMPLKNILEIELFDVWGIDFMGPFPPSF 1368
+ E+E FDVWGIDFMGPFP S+
Sbjct: 1295 A---------------------------------------EVENFDVWGIDFMGPFPSSY 1315
Query: 1369 GCQYILLAVDYVSKWVEAAALSTNDSKVVVAFLKKNIFTRFGVPRAIISDGGTHFCNRAF 1428
G +YIL+A+DYVSKWVEA A TND++VV+ K IF RFGVPR +ISDGG HF N+ F
Sbjct: 1316 GNKYILVAIDYVSKWVEAIASHTNDARVVLKLFKTIIFPRFGVPRIVISDGGKHFINKGF 1375
Query: 1429 ESLLEKYGVKHKVSTPYHPQTSGQVEISNRELKRILEKVVDSSRKDWSRKLDDALWAYRT 1488
E+LL+K+GVKHK VEISNRE+K ILEK V S+RKDWS KL+D LWAYRT
Sbjct: 1376 ENLLKKHGVKHK------------VEISNREIKAILEKTVGSTRKDWSAKLNDTLWAYRT 1423
Query: 1489 AFKTPIGTSPFHLVFGKACHLPVELEHKAYWAIRKLNFDWKVASEKRLLQLNELDEFRLR 1548
AFKTPIGT+PF+L++GK+CHLPVELE+KA WA++ LNFD K A EKRL+QLN+L++ RL
Sbjct: 1424 AFKTPIGTTPFNLLYGKSCHLPVELEYKAMWAVKLLNFDIKTAEEKRLIQLNDLNKIRLE 1483
Query: 1549 AYESASIYKEKTKKWHDRKILNREFVSGQLVLLFNSRLRLFPGKLKSRWSGPFVVKRVFP 1608
AYES+ IYKE+TK +HD+KI++R+F G VLLFNSRLRLFPGKLKSRWSGPF V V P
Sbjct: 1484 AYESSKIYKERTKSFHDKKIVSRDFKVGDQVLLFNSRLRLFPGKLKSRWSGPFSVTAVRP 1543
Query: 1609 HGAVEVENPETKNTFTVNGQRLKVY 1633
+GA+ + FTVNGQRLK Y
Sbjct: 1544 YGAITLAG--KNGDFTVNGQRLKKY 1566
Score = 175 bits (443), Expect = 1e-41
Identities = 124/398 (31%), Positives = 203/398 (50%), Gaps = 34/398 (8%)
Query: 244 TPTSEQDPLDQPQIVVKTVGKKSLEELIERFIDHTSSNYKSHDMAIKSLESKLGHLAKQM 303
TP S+ + Q + + G L + + + +Y ++ +++L SK+ ++ Q
Sbjct: 382 TPDSDLKNMLQQILQGQATGAMDLSKRMAEIHNKVDCSYNDINIKVEALTSKIRYIEGQT 441
Query: 304 SDNHQGKFSSETLTLIE--QENTAVVSTRSGRVL---HEPEEKIEGDKNEEAEVERDEGV 358
KF+ + + +E ++ RSG+ L P + E +++ E G
Sbjct: 442 GSTAAPKFTGPSGKSMSNSKEYAHAITLRSGKELPTKESPNQNTEDSLDQDGEDFCQNGN 501
Query: 359 MEERARE------PTRTRVV----------------NTHTPELRK--IPFPKALVKKNLD 394
E+A E PTR N P K +PFP K +
Sbjct: 502 SAEKAIEEPILHQPTRPLAPAASPLVEKPAAAKTKENVFIPPPYKPPLPFPGRFKKVMIQ 561
Query: 395 K*FSKFLEVFKKLHINIPFSEALEQMPIYAKFMKDILSKRRKLSEVDETILMTEECSAIL 454
K + + K L + +P + L +P K++KD++++R K EV ++++ ECSAI+
Sbjct: 562 KYKALLEKQLKNLEVTMPLVDCLALIPDSNKYVKDMITERIK--EVQGMVVLSHECSAII 619
Query: 455 QRKM-PKKRRDPGSFTIPVEIEGLTVVEALCDLGASINLMPLSMFKRLNLGEVTPTMISL 513
Q+K+ PKK DPGSFT+P + L + LCDLGAS++LMPL + K+L + P ISL
Sbjct: 620 QQKIIPKKLGDPGSFTLPCALGPLAFSKCLCDLGASVSLMPLPVAKKLGFNKYKPCNISL 679
Query: 514 QMADRSLKTPYGIIEDVVVKVDKFVFPVDFVILDMEEDSKVPLILGRPFLATGEAEIKVA 573
+ADRS++ +G++ED+ V + P DFV+L+M+E+ K PLILGRPFLA A I V
Sbjct: 680 ILADRSVRISHGLLEDLPVMIGVVEVPTDFVVLEMDEEPKDPLILGRPFLARARAIIDVK 739
Query: 574 KGTLTLKVGED-EVLFNIFDSLKHRADE-EVFRCEVVD 609
KG + L +G D ++ F+I +++K E +F E +D
Sbjct: 740 KGKIDLNLGRDLKMTFDITNTMKKPTIEGNIFWIEEMD 777
Score = 120 bits (302), Expect = 3e-25
Identities = 69/200 (34%), Positives = 101/200 (50%), Gaps = 22/200 (11%)
Query: 3 EDPHAHMERFIRNCNTYRVMNVPSEAIRLSLFPFSLKDAAEDWLNSQPQGSLTTWEDLAE 62
EDP H++ F R C+ ++ V + +L LFPFSL D A W S PQGS+T+W D +
Sbjct: 92 EDPLDHLDEFDRLCSLTKINRVSEDGFKLRLFPFSLGDKAHQWEKSLPQGSITSWNDCKK 151
Query: 63 KFTTRFFPRSLLRKLKNDIMTFAQSTDENLYEAWEHFKKLLRKCPQHNLTQAECVAKFYD 122
F +FF S +L+NDI F Q+ +E YEAWE FK +CP H +
Sbjct: 152 AFLAKFFSNSRTARLRNDISGFTQTNNETFYEAWERFKGYQTQCPHHEML---------- 201
Query: 123 GLLYSSRFGLDAASSGEFDALSPQVGYNLIEKMAMR--AMNSENERQIRRSSFEVETYDK 180
LD AS+G F + G+ ++E +A N + +R IR SS E + +
Sbjct: 202 ---------LDTASNGNFLNKDVEDGWEVVENLAQSDGNYNEDYDRSIRTSSDSDEKHRR 252
Query: 181 -LIASNKQLSEEVAEMRKHI 199
+ A N +L + + +KHI
Sbjct: 253 EMKAMNDKLDKLLLMQQKHI 272
>gb|AAR00600.1| putative reverse transcriptase [Oryza sativa (japonica
cultivar-group)] gi|50901488|ref|XP_463177.1| putative
reverse transcriptase [Oryza sativa (japonica
cultivar-group)]
Length = 743
Score = 804 bits (2076), Expect = 0.0
Identities = 402/825 (48%), Positives = 533/825 (63%), Gaps = 105/825 (12%)
Query: 810 ITVVANENNELIPTRQVTKWRVCIDYRRLNSVTRKDHFPLPFIDQMLDKLAGHQYYCFLD 869
+TVVAN NELIP R VT WR+CIDYR+LN T++DHFPLPFID+ML+++A H ++CFLD
Sbjct: 1 MTVVANAQNELIPQRTVTGWRMCIDYRKLNKATKEDHFPLPFIDEMLERMANHSFFCFLD 60
Query: 870 GYSGYNQICVAPEDQEKTAFTCPYDVFAYKRMPFGLCNAPATFQRCMFAIFSDLIETCIE 929
GYSGY+QI + PEDQ KT FTCPY +AY+RM FGLCNAPA+FQRCM +IFSD+IE
Sbjct: 61 GYSGYHQIPIHPEDQSKTTFTCPYGTYAYRRMSFGLCNAPASFQRCMMSIFSDMIE---- 116
Query: 930 IFMDDFSVFGPNFDACLGNLALVLKRCQETNLVLNWEKCHFMVRDGIVLGHKVSERGIEV 989
D VF +F V G
Sbjct: 117 ---DIMEVFMDDFS---------------------------------VYG---------- 130
Query: 990 DRAKIEVIEKLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKPMTNLLEKEAPFTFDENC 1049
+ +++ PP NIKGIRSFLGHAGFYRRFIKDFS +A+P+TNLL K+APF D+ C
Sbjct: 131 -----KTFDQIRPPVNIKGIRSFLGHAGFYRRFIKDFSTIARPLTNLLAKDAPFESDDAC 185
Query: 1050 LKAFESIKKSLVTAPVIVAPDWSLPFEIMCDASDLALGAVLCQKKERVLYVIYYASTVLN 1109
LK+FE +KK+LV+AP+I PDW+L FEIMCDASD A+GA
Sbjct: 186 LKSFEVLKKALVSAPIIQPPDWTLSFEIMCDASDFAVGA--------------------- 224
Query: 1110 EAQRNYTTTEKELLGVVFACEKFRPYILGFKVVVHTDHAALRHLFAKQDSKPRLIRWVLL 1169
FR Y++ KV+++TDHAAL++ K+D+KPRL+RW+LL
Sbjct: 225 ----------------------FRSYLVRAKVIIYTDHAALKYPLTKKDAKPRLLRWILL 262
Query: 1170 LQEFDLEIIDRRGKDNGVADHLSRLEGGACSPIPIQEEFPDEKLLAVSTEEPLPWYVHFA 1229
LQEFDLEI D++G +N VADHLSRL+ PI + D+ L+ V P WY +
Sbjct: 263 LQEFDLEIKDKKGVENSVADHLSRLQITNMPEQPINDFLRDDMLMTVRDSNP--WYANIV 320
Query: 1230 NFRVAGLIPHDLTWQQKKKFLHDAKSYLWDDPFLFKICSDGVIRRCIPEVNFEKILWYCH 1289
N+ V IP + ++ ++++ ++WD+P+L+++CSDG++RRC+P KI+ CH
Sbjct: 321 NYMVFKYIPPG---KNQRNLKYESRRHIWDEPYLYRVCSDGLLRRCVPTEEGLKIIERCH 377
Query: 1290 GSSYGGHFSGERTAAKVLQSGFYWPTLNRDSRAFVESCDRCQRTGNISRRNEMPLKNILE 1349
S YGGH+ RT AK+ QSGF+WPT+ DS+ FV C CQR G I+ R+ MPL L+
Sbjct: 378 ASPYGGHYGVFRTQAKIWQSGFFWPTMYEDSKEFVRRCTSCQRQGGITARDAMPLTYNLQ 437
Query: 1350 IELFDVWGIDFMGPFPPSFGCQYILLAVDYVSKWVEAAALSTNDSKVVVAFLKKNIFTRF 1409
+E+FDVWGIDFMGPFP S C+YIL+AVDYVSKWV+A S D++ + IF +F
Sbjct: 438 VEIFDVWGIDFMGPFPKSRNCEYILVAVDYVSKWVKAMPCSATDARHAKKMFIEIIFPKF 497
Query: 1410 GVPRAIISDGGTHFCNRAFESLLEKYGVKHKVSTPYHPQTSGQVEISNRELKRILEKVVD 1469
PR +ISDGG+HF ++ F LL + G KH V+TPYHPQTSGQ E SN+++K IL+K V+
Sbjct: 498 DTPRMVISDGGSHFIDKTFRDLLREMGAKHNVATPYHPQTSGQAETSNKQIKNILQKTVN 557
Query: 1470 SSRKDWSRKLDDALWAYRTAFKTPIGTSPFHLVFGKACHLPVELEHKAYWAIRKLNFDWK 1529
W +L DAL AY A+KTPI SP+ +V+ K C LPVELEH+AYWAIR N D++
Sbjct: 558 KMGTGWKDRLPDALCAYWIAYKTPIRMSPYQIVYRKPCRLPVELEHRAYWAIRNWNMDFE 617
Query: 1530 VASEKRLLQLNELDEFRLRAYESASIYKEKTKKWHDRKILNREFVSGQLVLLFNSRLRLF 1589
A E R +Q+ EL+E+R +AY +A IYKE+TK+WHD++ ++F G VL+FNSR++LF
Sbjct: 618 GAGEWRKMQIAELEEWREKAYHNAKIYKERTKRWHDKRKKIKKFKPGDKVLMFNSRVKLF 677
Query: 1590 -PGKLKSRWSGPFVVKRVFPHGAVEVENPETKNTFTVNGQRLKVY 1633
GKL+S+W GPF V HGA+ + + E N F VNGQRLK++
Sbjct: 678 GHGKLRSKWEGPFDVIDTSSHGAITLRD-ELGNIFKVNGQRLKIF 721
>pir||D84513 probable retroelement pol polyprotein [imported] - Arabidopsis
thaliana
Length = 841
Score = 723 bits (1867), Expect = 0.0
Identities = 410/868 (47%), Positives = 535/868 (61%), Gaps = 116/868 (13%)
Query: 431 LSKRRKLSEVDETILMTE----ECSAILQRKMPKKRRDPGSFTIPVEIEGLTVVEALCDL 486
+ + ++ S DE + + ECSAILQ +P KR DPGSF +P I T LCDL
Sbjct: 33 IQREKEYSLFDEIMRQLQRYSPECSAILQNVIPVKREDPGSFVLPSRIGEYTFDRCLCDL 92
Query: 487 GASINLMPLSMFKRLNLGEVTPTMISLQMADRSLKTPYGIIEDVVVKVDKFVFPVDFVIL 546
GA ++LMP S+ KRL TPT +SL + DRS+ P G+ EDV V+V F P DFVI+
Sbjct: 93 GAGVSLMPFSVAKRLGDTNFTPTKMSLVLGDRSISFPVGVAEDVQVRVGNFYIPTDFVII 152
Query: 547 DMEEDSKVPLILGRPFLATGEAEIKVAKGTLTLKVGEDEVLFNIFDSLKHRADE-EVFRC 605
+++E+ + LILGRPFL A I V K + L++G+ FN+ + E + F
Sbjct: 153 ELDEEPRHRLILGRPFLNIVAALIDVRKSKINLRIGDIVQEFNMERIMSKPTTECQTFWV 212
Query: 606 EVVDELVCEEFVRISIKDPLETTIMEGLEIEDQNLERELDSLYHEVNATLSQLECVSSLA 665
+++DELV E ++ +DPL+T + + E E L E +++ SS
Sbjct: 213 DIMDELVNELLAELNTEDPLQTVLTKE--------ESEFGYL-GEATTRFARILDSSSPM 263
Query: 666 TKSIWKEELTRDEEIPIEE-------------------KSELKPLPSSLKYAYLEEGENK 706
TK + EL +E +E+ K ELKPLP+ L+ A+L
Sbjct: 264 TKVVAFAELGDNE---VEKALVVSSPKDCDDWSELNAPKMELKPLPARLRVAFLGPNSTY 320
Query: 707 PVILNSALTPLEEEKLLRVLRDHKSALGWTIDDIKGISPAICMHKILLEENYKPIVQPQR 766
VI+N L +E LL LR ++ ALG+++DDI GISP +CMH I LE V+ QR
Sbjct: 321 LVIINPELNNVESALLLCELRKYRKALGYSLDDITGISPTLCMHMIHLEGESITSVEHQR 380
Query: 767 RLNPSMKDVVRKEIIKLLDAGVIYPISDSEWVSPVQVVPKKGGITVVANENNELIPTRQV 826
RLN +++DVV+KEI+KLLDAG+IYPISDS WVSPV VVPKKGG+ V+ NE NELIPTR V
Sbjct: 381 RLNSNLRDVVKKEIMKLLDAGIIYPISDSTWVSPVHVVPKKGGVIVIKNEKNELIPTRTV 440
Query: 827 TKWRVCIDYRRLNSVTRKDHFPLPFIDQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQEK 886
T R+CIDYR+LNS TRKD+FPL FIDQML++L+ YYCFLDGY G+ QI + P+DQEK
Sbjct: 441 TGHRMCIDYRKLNSATRKDNFPLSFIDQMLERLSNQPYYCFLDGYLGFFQILIHPDDQEK 500
Query: 887 TAFTCPYDVFAYKRMPFGLCNAPATFQRCMFAIFSDLIETCIEIFMDDFSVFGPNFDACL 946
T FTCPY FAY+RMPFGLCNAPATFQ CM IFSD+IE +E+F+DDF
Sbjct: 501 TTFTCPYGTFAYRRMPFGLCNAPATFQHCMKYIFSDMIEDFMEVFIDDF----------- 549
Query: 947 GNLALVLKRCQETNLVLNWEKCHFMVRDGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNI 1006
LVL+RC++ +LVLNWEK HFMVRDGIVLGHK+SE+G+EVDRAKIE++
Sbjct: 550 ----LVLQRCEDKHLVLNWEKSHFMVRDGIVLGHKISEKGVEVDRAKIEIMR-------- 597
Query: 1007 KGIRSFLGHAGFYRRFIKDFSKLAKPMTNLLEKEAPFTFDENCLKAFESIKKSLVTAPVI 1066
FLGHAGFYRRFIKDFSK+A+P T LL KE FD+ CL+AF +K+SLV+A ++
Sbjct: 598 -----FLGHAGFYRRFIKDFSKIARPCTQLLCKEQKSEFDDTCLQAFNIVKESLVSALIV 652
Query: 1067 VAPDWSLPFEIMCDASDLALGAVLCQKKERVLYVIYYASTVLNEAQRNYTTTEKELLGVV 1126
P+W LPFE++CDASD +GAVL Q+K++ L+ IYYAS L+ AQ
Sbjct: 653 QPPEWELPFEVICDASDYVVGAVLGQRKDKKLHAIYYASRTLDGAQ-------------- 698
Query: 1127 FACEKFRPYILGFKVVVHTDHAALRHLFAKQDSKPRLIRWVLLLQEFDLEIIDRRGKDNG 1186
V+VHT HAALR+L +K+D+KPRL+RW+LLLQ+FDLEI D++G +N
Sbjct: 699 --------------VIVHTVHAALRYLLSKKDAKPRLLRWILLLQDFDLEIKDKKGIENE 744
Query: 1187 VADHLSRLEGGACSPIPIQEEFPDEKL-------------LAVST---------EEPLPW 1224
VAD+LSRL + +++ P E L L VST E LPW
Sbjct: 745 VADNLSRLR--VQEEVLMRDILPGENLASIEDCYMDEVGRLRVSTLELMTLHTGESNLPW 802
Query: 1225 YVHFANFRVAGLIPHDLTWQQKKKFLHD 1252
Y FAN+ + P D T KKK L +
Sbjct: 803 YADFANYLSCEVPPPDFTGYFKKKLLKE 830
>gb|AAD19780.2| hypothetical protein [Arabidopsis thaliana]
Length = 1048
Score = 679 bits (1752), Expect = 0.0
Identities = 409/973 (42%), Positives = 554/973 (56%), Gaps = 165/973 (16%)
Query: 330 RSGRVLH--------EPEEKIEGDKNEEAEVERDEGVMEERAREPTRTRVVNTHTPELRK 381
+SGR L+ + + K D EE ++ +EE+A++ P + K
Sbjct: 45 KSGRELNPILKKEKAKEKSKAASDDLEEDNTGKESDTLEEKAKKTVLP-------PYVPK 97
Query: 382 IPFPKALVKKNLDK*FSKFLEVFKKLHINIPFSEALEQMPIYAKFMKDILSKRRKLSEVD 441
+PFP K +K +S F E+ ++L + +PF + ++ + IY K +KDIL+ +R L E
Sbjct: 98 LPFPGRQRKIQREKEYSLFDEIMRQLQVKLPFLDLVQNVSIYRKHLKDILTNKRTLEEGH 157
Query: 442 ETILMTEECSAILQRKMPKKRRDPGSFTIPVEIEGLTVVEALCDLGASINLMPLSMFKRL 501
+L++ ECSAILQ R I T LCDLGA ++LMP S+ KRL
Sbjct: 158 --VLISHECSAILQNVALFSRM----------IGEYTFDRCLCDLGAGVSLMPFSVAKRL 205
Query: 502 NLGEVTPTMISLQMADRSLKTPYGIIEDVVVKVDKFVFPVDFVILDMEEDSKVPLILGRP 561
TPT +SL + DRS+ P G+ EDV V+V F P DFVI++++E+ + LILGRP
Sbjct: 206 GDTNFTPTKMSLVLGDRSISFPVGVAEDVQVRVGNFYIPTDFVIIELDEEPRHRLILGRP 265
Query: 562 FLATGEAEIKVAKGTLTLKVGEDEVLFNIFDSLKHRADE-EVFRCEVVDELVCEEFVRIS 620
FL A I V K + L++G+ FN+ + E + F +++DELV E ++
Sbjct: 266 FLNIVAALIDVRKSKINLRIGDIVQEFNMERIMSKPTTECQTFWVDIMDELVNELLAELN 325
Query: 621 IKDPLETTIMEGLEIEDQNLERELDSLYHEVNATLSQLECVSSLATKSIWKEELTRDEEI 680
+DPL+T + + E E L E +++ SS TK + EL +E
Sbjct: 326 TEDPLQTVLTKE--------ESEFGYL-GEATTRFARILDSSSPMTKVVAFAELGDNE-- 374
Query: 681 PIEE-------------------KSELKPLPSSLKYAYLEEGENKPVILNSALTPLEEEK 721
+E+ K ELKPLP+ L+ A+L VI+N L +E
Sbjct: 375 -VEKALVVSSPKDCDDWSELNAPKMELKPLPARLRVAFLGPNSTYLVIINPELNNVESAL 433
Query: 722 LLRVLRDHKSALGWTIDDIKGISPAICMHKILLEENYKPIVQPQRRLNPSMKDVVRKEII 781
LL LR ++ ALG+++DDI GISP +CMH I LE V+ QRRLN +++DVV+KEI+
Sbjct: 434 LLCELRKYRKALGYSLDDITGISPTLCMHMIHLEGESITSVEHQRRLNSNLRDVVKKEIM 493
Query: 782 KLLDAGVIYPISDSEWVSPVQVVPKKGGITVVANENNELIPTRQVTKWRVCIDYRRLNSV 841
KLLDAG+IYPISDS WVSPV VVPKKGG+ V+ NE NELIPTR VT R+CIDYR+LNS
Sbjct: 494 KLLDAGIIYPISDSTWVSPVHVVPKKGGVIVIKNEKNELIPTRTVTGHRMCIDYRKLNSA 553
Query: 842 TRKDHFPLPFIDQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQEKTAFTCPYDVFAYKRM 901
TRKD+FPL FIDQML++L+ YYCFLDGY G+ QI + P+DQEKT FTCPY FAY+RM
Sbjct: 554 TRKDNFPLSFIDQMLERLSNQPYYCFLDGYLGFFQILIHPDDQEKTTFTCPYGTFAYRRM 613
Query: 902 PFGLCNAPATFQRCMFAIFSDLIETCIEIFMDDFSVFGPNFDACLGNLALVLKRCQETNL 961
PFGLCNAPATFQ CM IFSD+IE DF ++RC++ +L
Sbjct: 614 PFGLCNAPATFQHCMKYIFSDMIE--------DF-----------------MERCEDKHL 648
Query: 962 VLNWEKCHFMVRDGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGIRSFLGHAGFYRR 1021
VLNWEK HFMVRDGIVLGHK+SE+G+EVDRAKIEV+ + PP ++K
Sbjct: 649 VLNWEKSHFMVRDGIVLGHKISEKGVEVDRAKIEVMMSMQPPNSVKD------------- 695
Query: 1022 FIKDFSKLAKPMTNLLEKEAPFTFDENCLKAFESIKKSLVTAPVIVAPDWSLPFEIMCDA 1081
+E FD+ CL+AF +K+SLV+A ++ P+W LPFE++CDA
Sbjct: 696 ----------------HEEQKSEFDDTCLQAFNIVKESLVSALIVQPPEWELPFEVICDA 739
Query: 1082 SDLALGAVLCQKKERVLYVIYYASTVLNEAQRNYTTTEKELLGVVFACEKFRPYILGFKV 1141
SD +GAVL Q+K++ L+ IYYAS L+ AQ V
Sbjct: 740 SDYVVGAVLGQRKDKKLHAIYYASRTLDGAQ----------------------------V 771
Query: 1142 VVHTDHAALRHLFAKQDSKPRLIRWVLLLQEFDLEIIDRRGKDNGVADHLSRLEGGACSP 1201
+VHT HAALR+L +K+D+KPRL+RW+LLLQ+FDLEI D++G +N VAD+LSRL
Sbjct: 772 IVHTVHAALRYLLSKKDAKPRLLRWILLLQDFDLEIKDKKGIENEVADNLSRLR--VQEE 829
Query: 1202 IPIQEEFPDEKL-------------LAVST---------EEPLPWYVHFANFRVAGLIPH 1239
+ +++ P E L L VST E LPWY FAN+ + P
Sbjct: 830 VLMRDILPGENLASIEDCYMDEVGRLRVSTLELMTLHTGESNLPWYADFANYLSCEVPPP 889
Query: 1240 DLTWQQKKKFLHD 1252
D T KKK L +
Sbjct: 890 DFTGYFKKKLLKE 902
Score = 134 bits (337), Expect = 3e-29
Identities = 73/174 (41%), Positives = 104/174 (58%), Gaps = 43/174 (24%)
Query: 1461 KRILEKVVDSSRKDWSRKLDDALWAYRTAFKTPIGTSPFHLVFGKACHLPVELEHKAYWA 1520
K++L++V++ W T +KTP+GT+PF+L++GK+CHLPVELE+KA WA
Sbjct: 897 KKLLKEVLEERPPSW------------TTYKTPVGTTPFNLIYGKSCHLPVELEYKALWA 944
Query: 1521 IRKLNFDWKVASE-KRLLQLNELDEFRLRAYESASIYKEKTKKWHDRKILNREFVSGQLV 1579
+ +N+D K A E +RLLQLNELDE + G V
Sbjct: 945 TKLMNYDIKPAGERRRLLQLNELDE-----------------------------IQGDKV 975
Query: 1580 LLFNSRLRLFPGKLKSRWSGPFVVKRVFPHGAVEVENPETKNTFTVNGQRLKVY 1633
LLFNS+L++FPGKL+S+WSGPFV+ + P+G+ + + K F+ NGQRLK Y
Sbjct: 976 LLFNSKLKIFPGKLRSKWSGPFVIMEMRPNGSAILWDNNGK-PFSTNGQRLKPY 1028
>emb|CAD39928.2| OSJNBa0091C12.6 [Oryza sativa (japonica cultivar-group)]
gi|50921841|ref|XP_471281.1| OSJNBa0091C12.6 [Oryza
sativa (japonica cultivar-group)]
Length = 781
Score = 675 bits (1741), Expect = 0.0
Identities = 374/857 (43%), Positives = 516/857 (59%), Gaps = 99/857 (11%)
Query: 467 SFTIPVEIEGLTVVEALCDLGASINLMPLSM-FKRLNLGEVTPTMISLQMADRSLKTPYG 525
S TI I G +V AL + N+M + F L + PT+ + +++ S G
Sbjct: 22 SSTIMCHIGGNSV-RALYNPSVGANIMSATFAFDCLGDRSLEPTVRTFRISTNSTTEGLG 80
Query: 526 IIEDVVVKVDKFVFPVDFVILDMEEDSKVPLILGRPFLATGEAEIKVAK-GTLTLKVGED 584
II V + + +DF + ++ + +++G P E + V + G L LK+G
Sbjct: 81 IISGVPTRHNSVEVILDFHVFEIYD---FDILIGHPI----EKLLDVPETGVLNLKIGRI 133
Query: 585 EVLFNIFDSLKHRADEEVFRCEVVDELVCEEFVRISIKDPLETTIMEGLEIEDQNLEREL 644
+ S + V E + E + IS + LE+ E +E E
Sbjct: 134 ATSVPMLQSTN-----SLMESLPVPEPI-EGVMAISPFETLESIFDESIE--------EF 179
Query: 645 DSLYHEVNATLSQLECVSSLATKSIWKEELTRDEEIPIEEKSELKPLPSSLKYAYLEEGE 704
+ E T+ + ++P ELKPLPSSL YA+L
Sbjct: 180 NEGEDETGETMDLPKT------------------DLPSRAPIELKPLPSSLSYAFLNSDA 221
Query: 705 NKPVILNSALTPLEEEKLLRVLRDHKSALGWTIDDIKGISPAICMHKILLEENYKPIVQP 764
VI++ L+ E +L+ +L H +A G+++ D+KGISP +C H+ILLE + P +P
Sbjct: 222 ESLVIISDKLSEREMARLIAILEKHSAAFGYSLQDLKGISPTLCTHRILLEPSSTPSREP 281
Query: 765 QRRLNPSMKDVVRKEIIKLLDAGVIYPISDSEWVSPVQVVPKKGGITVVANENNELIPTR 824
QRRLN +M++V++KE++KLL G+IYP+ SEWVSPVQVVPKKGG+TVV N NNELIP R
Sbjct: 282 QRRLNNAMREVIKKEVLKLLHTGIIYPVPYSEWVSPVQVVPKKGGMTVVENSNNELIPQR 341
Query: 825 QVTKWRVCIDYRRLNSVTRKDHFPLPFIDQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQ 884
VT WR+CIDYR+LN T+KDHF LPFID+ML++LA H ++CFLDGYS Y+Q
Sbjct: 342 TVTGWRMCIDYRKLNKATKKDHFSLPFIDEMLERLANHSFFCFLDGYSSYHQ-------- 393
Query: 885 EKTAFTCPYDVFAYKRMPFGLCNAPATFQRCMFAIFSDLIETCIEIFMDDFSVFGPNFDA 944
I I+ DD ++G F+
Sbjct: 394 -------------------------------------------IPIYPDD-QIYGKTFNH 409
Query: 945 CLGNLALVLKRCQETNLVLNWEKCHFMVRDGIVLGHKVSERGIEVDRAKIEVIEKLPPPT 1004
CL NL VL+RCQE +LVLNWEK HFMVR+GIVLGH++SERG+EVDRAKIEVI +LPPP
Sbjct: 410 CLENLDKVLQRCQEKDLVLNWEKYHFMVREGIVLGHQISERGVEVDRAKIEVIRQLPPPV 469
Query: 1005 NIKGIRSFLGHAGFYRRFIKDFSKLAKPMTNLLEKEAPFTFDENCLKAFESIKKSLVTAP 1064
N G+RSFLGHAGFYRRFIKDFSK+A+P+T LL + P FD+ C+K+F+ +K+SL++AP
Sbjct: 470 NDMGVRSFLGHAGFYRRFIKDFSKIARPLTALLANDVPVDFDDECMKSFKILKESLISAP 529
Query: 1065 VIVAPDWSLPFEIMCDASDLALGAVLCQKKERVLYVIYYASTVLNEAQRNYTTTEKELLG 1124
+I DWSL FEIMCDASD A+GAVL Q K+R + I YAS L AQ NY TTEKELL
Sbjct: 530 IIQPSDWSLLFEIMCDASDFAVGAVLGQTKDRKHHAITYASKTLTGAQLNYATTEKELLA 589
Query: 1125 VVFACEKFRPYILGFKVVVHTDHAALRHLFAKQDSKPRLIRWVLLLQEFDLEIIDRRGKD 1184
VVFA EKFR Y++G KVVV+TDHAAL++L K+D+KPR+IRW+LLLQEFD+EI+D++G +
Sbjct: 590 VVFAIEKFRSYLVGAKVVVYTDHAALKYLLTKKDAKPRVIRWILLLQEFDIEIMDKKGVE 649
Query: 1185 NGVADHLSRLEGGACSPIPIQEEFPDEKLLAVSTEEPLPWYVHFANFRVAGLIPHDLTWQ 1244
N VADHLSR++ + I + D+ L V + PWY NF G +P +
Sbjct: 650 NYVADHLSRMQITNMQKLLINDYLRDDMRLKVIDSD--PWYATIVNFMATGHVP---PVE 704
Query: 1245 QKKKFLHDAKSYLWDDPFLFKICSDGVIRRCIPEVNFEKILWYCHGSSYGGHFSGERTAA 1304
KK+ +++++ +LWD P+LF++CSDG++R C+ I+ CH + YGGH+ RT A
Sbjct: 705 NKKRLIYESRRHLWDAPYLFRVCSDGLLRICVSTDEGIMIIEKCHAAPYGGHYGAFRTHA 764
Query: 1305 KVLQSGFYWPTLNRDSR 1321
K+ QSGF+WP++ D++
Sbjct: 765 KIWQSGFFWPSMYDDTK 781
>emb|CAD39877.2| OSJNBb0058J09.16 [Oryza sativa (japonica cultivar-group)]
gi|50922333|ref|XP_471527.1| OSJNBb0058J09.16 [Oryza
sativa (japonica cultivar-group)]
Length = 1045
Score = 650 bits (1676), Expect = 0.0
Identities = 308/567 (54%), Positives = 406/567 (71%), Gaps = 23/567 (4%)
Query: 999 KLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKPMTNLLEKEAPFTFDENCLKAFESIKK 1058
+LPPP NIKGI SFLGHAGFYRRFIKDFS +A+P+TNLL K+APF F++ CL++F+ +KK
Sbjct: 500 RLPPPVNIKGICSFLGHAGFYRRFIKDFSTIARPLTNLLAKDAPFEFNDACLRSFKILKK 559
Query: 1059 SLVTAPVIVAPDWSLPFEIMCDASDLALGAVLCQKKERVLYVIYYASTVLNEAQRNYTTT 1118
+LV+AP+I PDW+LPFEIMCDASD A+GAVL Q K++ + I YAS L AQ NY TT
Sbjct: 560 ALVSAPIIQPPDWTLPFEIMCDASDFAVGAVLGQTKDKKHHAICYASKTLTGAQLNYATT 619
Query: 1119 EKELLGVVFACEKFRPYILGFKVVVHTDHAALRHLFAKQDSKPRLIRWVLLLQEFDLEII 1178
EKELL VVFA +KFR Y++G KV+++TDHAAL++L K+D+KPRL+RW+LLLQEFD+EI
Sbjct: 620 EKELLTVVFAIDKFRSYLVGAKVIIYTDHAALKYLLTKKDAKPRLLRWILLLQEFDIEIK 679
Query: 1179 DRRGKDNGVADHLSRLEGGACSPIPIQEEFPDEKLLAVSTEEPLPWYVHFANFRVAGLIP 1238
D++G +N VADHLSRL PI + D+ L+ IP
Sbjct: 680 DKKGVENYVADHLSRLHITNMQEQPINDLLRDDMLMTC--------------------IP 719
Query: 1239 HDLTWQQKKKFLHDAKSYLWDDPFLFKICSDGVIRRCIPEVNFEKILWYCHGSSYGGHFS 1298
+ ++K +++ ++WD+P+L+++CSDG++RRC+P KI+ CH S YGGH+
Sbjct: 720 PG---ENQRKLKYESHRHIWDEPYLYRVCSDGLLRRCVPTDEGLKIIERCHASPYGGHYG 776
Query: 1299 GERTAAKVLQSGFYWPTLNRDSRAFVESCDRCQRTGNISRRNEMPLKNILEIELFDVWGI 1358
RT AK+ QSGF+WPT+ DS+ F+ C CQR G I+ R+ MPL L++E+FDVWGI
Sbjct: 777 AFRTQAKIWQSGFFWPTMYEDSKEFIRRCTSCQRQGGITARDAMPLTYNLQVEIFDVWGI 836
Query: 1359 DFMGPFPPSFGCQYILLAVDYVSKWVEAAALSTNDSKVVVAFLKKNIFTRFGVPRAIISD 1418
DFMGPFP S C+YIL+AVDYVSKWVEA S D++ + IF RFG R +ISD
Sbjct: 837 DFMGPFPKSRNCEYILVAVDYVSKWVEAMPCSAADARHAKKMFTETIFPRFGTRRMVISD 896
Query: 1419 GGTHFCNRAFESLLEKYGVKHKVSTPYHPQTSGQVEISNRELKRILEKVVDSSRKDWSRK 1478
G HF ++ F LL + KH V+TPYHPQTSGQ E SN+++K IL+K V+ +W +
Sbjct: 897 RGFHFIDKTFRDLLREMEAKHNVATPYHPQTSGQAETSNKQIKNILQKTVNKMGTEWKDR 956
Query: 1479 LDDALWAYRTAFKTPIGTSPFHLVFGKACHLPVELEHKAYWAIRKLNFDWKVASEKRLLQ 1538
L DALWAYRTA+KTPIG SP+ +V+GK+C LPVELEH+AYWAIR N D++ A E R +Q
Sbjct: 957 LQDALWAYRTAYKTPIGMSPYQIVYGKSCRLPVELEHRAYWAIRNSNMDFEGAGEWRKMQ 1016
Query: 1539 LNELDEFRLRAYESASIYKEKTKKWHD 1565
+ EL+E+R AY +A IYKE+TK+WHD
Sbjct: 1017 IAELEEWREMAYHNAKIYKERTKRWHD 1043
Score = 102 bits (253), Expect = 1e-19
Identities = 91/301 (30%), Positives = 151/301 (49%), Gaps = 48/301 (15%)
Query: 493 MPLSMFKRLNLGEVTPTMISLQ--MADRSLKTPYGIIEDVVVKVDKFVFPVDFVILDMEE 550
+PLS + LG + T+ L M+D L+ I++DV+V ++ +DF + ++++
Sbjct: 210 VPLSPPNPMELGFLRETVRELTSIMSDEWLRE---IVQDVLVYFEEREAILDFHVFEIQD 266
Query: 551 -DSKVPLILGRPFLATGEAEIKVAKGTLTLKVGEDEVLFNIFDSLKHRADEEVFRCEVVD 609
D + L + + + T G+L + +GE+E F RA
Sbjct: 267 FDILIRLPIEQLLINTPHL------GSLKITLGENE-----FSIPFSRA----------- 304
Query: 610 ELVCEEFVRISIKDPLETTIMEGLEIEDQNLERELDSLY-HEVNATLSQLECVSSLATKS 668
RI++ DPL EIE L E+ ++ HE L + E + ++
Sbjct: 305 --------RITLTDPLP-------EIE---LVEEVTAVPPHESPEALLEDEVPDFIKEEA 346
Query: 669 IWKEELTRD-EEIPIEEKSELKPLPSSLKYAYLEEGENKPVILNSALTPLEEEKLLRVLR 727
E L E P + ELKPLP L+YA+L PVI++ L+ E ++L VL
Sbjct: 347 DPGETLDLPIMEPPPQPPLELKPLPLGLRYAFLHNDREAPVIISDKLSKDETQRLPTVLE 406
Query: 728 DHKSALGWTIDDIKGISPAICMHKILLEENYKPIVQPQRRLNPSMKDVVRKEIIKLLDAG 787
H+S LG+++ D++GI+ A+C H+I ++ P +PQRRLN M++VV+KE++KLL AG
Sbjct: 407 KHRSVLGYSLQDLRGINLALCTHRIPIDPKSTPSREPQRRLNNEMQEVVKKEVLKLLHAG 466
Query: 788 V 788
+
Sbjct: 467 I 467
>emb|CAE03895.1| OSJNBb0026I12.3 [Oryza sativa (japonica cultivar-group)]
gi|50921891|ref|XP_471306.1| OSJNBb0026I12.3 [Oryza
sativa (japonica cultivar-group)]
Length = 589
Score = 639 bits (1648), Expect = 0.0
Identities = 301/508 (59%), Positives = 395/508 (77%), Gaps = 6/508 (1%)
Query: 810 ITVVANENNELIPTRQVTKWRVCIDYRRLNSVTRKDHFPLPFIDQMLDKLAGHQYYCFLD 869
+TVVAN NNELIP R VT WR+CIDY++LN T+KD+FPLP ID+ML++LA H +CFLD
Sbjct: 1 MTVVANVNNELIPQRTVTGWRMCIDYQKLNKATKKDNFPLPVIDEMLERLANHSLFCFLD 60
Query: 870 GYSGYNQICVAPEDQEKTAFTCPYDVFAYKRMPFGLCNAPATFQRCMFAIFSDLIETCIE 929
GYSGY+QI + P+DQ KT FTCPY +AY+RM FGLCNAPA+FQRCM +IFSD+IE +E
Sbjct: 61 GYSGYHQIPIHPKDQCKTTFTCPYGTYAYRRMSFGLCNAPASFQRCMMSIFSDMIEAIME 120
Query: 930 IFMDDFSVFGPNFDACLGNLALVLKRCQETNLVLNWEKCHFMVRDGIVLGHKVSERGIEV 989
+FMDDFS++G FD CL NL V +RCQE +LVLNWEKCHFMV +GIVLGH+VSERGIEV
Sbjct: 121 VFMDDFSLYGKTFDHCLQNLDKVFQRCQEKDLVLNWEKCHFMVHEGIVLGHRVSERGIEV 180
Query: 990 DRAKIEVIEKLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKPMTNLLEKEAPFTFDENC 1049
DRAKIEVI++LPPP NIKGIR+FLGHAGF+RRFIK+FS +A+P+TNLL K+APF FD+ C
Sbjct: 181 DRAKIEVIDQLPPPVNIKGIRNFLGHAGFHRRFIKEFSTIARPLTNLLAKDAPFEFDDVC 240
Query: 1050 LKAFESIKKSLVTAPVIVAPDWSLPFEIMCDASDLALGAVLCQKKERVLYVIYYASTVLN 1109
LK+F+++KK+LV+A +I PD LPFEIMCDASD +GAVL Q K++ L+ I YAS L
Sbjct: 241 LKSFKTLKKALVSALIIQPPDGMLPFEIMCDASDFIVGAVLGQTKDKKLHAICYASETLA 300
Query: 1110 EAQRNYTTTEKELLGVVFACEKF-RPYILGFKVVVHTDHAALRHLFAKQDSKPRLIRWVL 1168
AQ NY TTEKELL VVFA +KF R ++G KV+V+T+HAAL++L K+D+KPRL+RW+
Sbjct: 301 GAQSNYATTEKELLAVVFAIDKFRRSDLVGAKVIVYTEHAALKYLLTKKDAKPRLLRWIP 360
Query: 1169 LLQEFDLEIIDRRGKDNGVADHLSRLEGGACSPIPIQEEFPDEKLLAVSTEEPLPWYVHF 1228
LLQEFDLEI D++G +N VADHLSRL+ PI D+ L+AV + PWY +
Sbjct: 361 LLQEFDLEIKDKKGVENSVADHLSRLQLTNMQEPPINYFLQDDMLMAVRNSD--PWYANI 418
Query: 1229 ANFRVAGLIPHDLTWQQKKKFLHDAKSYLWDDPFLFKICSDGVIRRCIPEVNFEKILWYC 1288
N+ V+ +P + ++K +++ ++WD+P+L+++CS+G++RRC+P+ KI+ C
Sbjct: 419 VNYMVSKYVPQG---ENQRKLKYESHCHIWDEPYLYRVCSNGLLRRCVPKEEGFKIIERC 475
Query: 1289 HGSSYGGHFSGERTAAKVLQSGFYWPTL 1316
H + Y GH+ RT AK+ QS F+WPT+
Sbjct: 476 HAAPYRGHYGAFRTQAKIWQSRFFWPTM 503
Score = 71.2 bits (173), Expect = 3e-10
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 1428 FESLLEKYGVKHKVSTPYHPQTSGQVEISNRELKRILEKVVDSSRKDWSRKLDDALW 1484
F LL K KH ++TPYHPQT+GQ E+SN+++K IL+K V W KL DALW
Sbjct: 505 FRELLRKMNAKHNIATPYHPQTNGQAEMSNKQIKNILQKTVHEMGTGWKDKLPDALW 561
>gb|AAG52026.1| polyprotein, putative; 77260-80472 [Arabidopsis thaliana]
gi|25405064|pir||B96492 probable polyprotein, 77260-80472
[imported] - Arabidopsis thaliana
Length = 884
Score = 618 bits (1593), Expect = e-175
Identities = 352/821 (42%), Positives = 495/821 (59%), Gaps = 124/821 (15%)
Query: 381 KIPFPKALVKKNLDK*FSKFLEVFKKLHINIPFSEALEQMPIYAKFMKDILSKRRKLSEV 440
K+PFPK+ K + ++ + KL + +P +A++ P+ +F+K I++K +
Sbjct: 160 KVPFPKSPRKSKQELDDARCKVMMDKLIVEMPLIDAVKSSPMIRQFVKRIVTK----DML 215
Query: 441 DETILMT--EECSAILQRKMPKKRRDPGSFTIPVEIEGLTVVEALCDLGASINLMPLSMF 498
ET++MT + S I+Q K+P+K D
Sbjct: 216 TETVVMTMSTQVSDIIQNKIPQKLPDR--------------------------------- 242
Query: 499 KRLNLGEVTPTMISLQMADRSLKTPYGIIEDVVVKVDKFVFPVDFVILDMEEDSKVPLIL 558
++ PT I+L +ADRS++ GII DV V+V P D V+L E++ K PLIL
Sbjct: 243 ------DLEPTQITLVLADRSVRRSDGIICDVPVQVGTSYIPTDLVVLSYEKEPKDPLIL 296
Query: 559 GRPFLATGEAEIKVAKGTLTLKVGEDEVLFNIFDSLKHRA-DEEVFRCEVVDELVCEEFV 617
GRPFL T A I V KG + L VG+ + F+I +K D + F + + L E +
Sbjct: 297 GRPFLVTTGAIIDVRKGIIGLNVGDLTMQFDINKVVKKPTIDGKTFYLDTISFLADEFLM 356
Query: 618 RISIKDPLETTIMEGLEIEDQNLERELDSLYHEVNATLSQLECV---SSLATKSIWKEEL 674
++++ PL+ ++ ++ + + LD + H V ++Q E + S AT W E
Sbjct: 357 KMTLAVPLKHALIPSIDKVPKGYGKLLDRIEH-VMQLVAQEELIGTSSQAATIGDWSLEK 415
Query: 675 TRDEEIPIEEKSELKPLPSSLKYAYLEEGENKPVILNSALTPLEEEKLLRVLRDHKSALG 734
K +LKPLP L+YA+L E VI+N++L +E LL LR ++ ALG
Sbjct: 416 A--------PKVDLKPLPPGLRYAFLGENSTYHVIVNASLNKVELTLLLSKLRKYRKALG 467
Query: 735 WTIDDIKGISPAICMHKILLEENYKPIVQPQRRLNPSMKDVVRKEIIKLLDAGVIYPISD 794
+++DDI GISP +CMH+I L++ KP V+ +RRLNP++ K+ +K
Sbjct: 468 YSLDDITGISPDLCMHRIHLKDESKPSVEHRRRLNPNL-----KDAVK------------ 510
Query: 795 SEWVSPVQVVPKKGGITVVANENNELIPTRQVTKWRVCIDYRRLNSVTRKDHFPLPFIDQ 854
+++ K +LN+ TRK+HFPL FIDQ
Sbjct: 511 -----------------------------KEIMK--------KLNAATRKNHFPLQFIDQ 533
Query: 855 MLDKLAGHQYYCFLDGYSGYNQICVAPEDQEKTAFTCPYDVFAYKRMPFGLCNAPATFQR 914
+L++L+ H+YYC LDGYSG+ QI + P+DQEKT FTCPY FAY RMPFGLCNAPA F+R
Sbjct: 534 LLERLSNHKYYCVLDGYSGFFQIPIHPDDQEKTMFTCPYGTFAYSRMPFGLCNAPAIFER 593
Query: 915 CMFAIFSDLIETCIEIFMDDFSVFGPNFDACLGNLALVLKRCQETNLVLNWEKCHFMVRD 974
CM +IF+D+IE IE+FMDDFSV+G +F+ACL NL VL RC+E NLVLNWEKCHFMV++
Sbjct: 594 CMMSIFTDMIENFIEVFMDDFSVYGSSFEACLENLRKVLARCEEKNLVLNWEKCHFMVQE 653
Query: 975 GIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKPMT 1034
GIVLGHKVS GIEV++AKIEV+ L ++ RF+KDFSK+A+P+T
Sbjct: 654 GIVLGHKVSGAGIEVNKAKIEVMTSLQALDSVN------------LRFVKDFSKIARPLT 701
Query: 1035 NLLEKEAPFTFDENCLKAFESIKKSLVTAPVIVAPDWSLPFEIMCDASDLALGAVLCQKK 1094
LL K+ F F+ C AF IK +LV+AP++ DW+LPFEIMCDA D A+GAVL Q+K
Sbjct: 702 ALLCKDVKFDFNSECHDAFNQIKNALVSAPIVQPLDWNLPFEIMCDAGDYAVGAVLGQRK 761
Query: 1095 ERVLYVIYYASTVLNEAQRNYTTTEKELLGVVFACEKFRPYILGFKVVVHTDHAALRHLF 1154
L+ I+YAS L++AQRN TTEKELL VVFA +KFR Y++G KV+VHTDH+AL++L
Sbjct: 762 GNKLHAIHYASRTLDDAQRNNATTEKELLAVVFAFDKFRSYLVGSKVIVHTDHSALKYLM 821
Query: 1155 AKQDSKPRLIRWVLLLQEFDLEIIDRRGKDNGVADHLSRLE 1195
K+D+KPRL+RW+LLLQEFD+E+ DR+G +NGVADHLSR++
Sbjct: 822 QKKDAKPRLLRWILLLQEFDIEVRDRKGIENGVADHLSRIK 862
>pir||T12085 reverse transcriptase homolog - fava bean (fragment)
gi|2522228|dbj|BAA22787.1| reverse transcriptase-like
protein [Vicia faba]
Length = 407
Score = 588 bits (1516), Expect = e-166
Identities = 278/397 (70%), Positives = 339/397 (85%), Gaps = 5/397 (1%)
Query: 831 VCIDYRRLNSVTRKDHFPLPFIDQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQEKTAFT 890
VCIDYRRLN TRKDHFPLPFIDQML++LA H+YYCFLDGYSGYNQI V PEDQEKT FT
Sbjct: 1 VCIDYRRLNLATRKDHFPLPFIDQMLERLADHEYYCFLDGYSGYNQIAVVPEDQEKTTFT 60
Query: 891 CPYDVFAYKRMPFGLCNAPATFQRCMFAIFSDLIETCIEIFMDDFSVFGPNFDACLGNLA 950
CP+ +F+Y+R+PFGLCNAPATFQRCM +IF+D++E +E+FMDDFSVFG +FD CL NLA
Sbjct: 61 CPFGIFSYRRIPFGLCNAPATFQRCMQSIFADMLEKYMEVFMDDFSVFGKSFDNCLSNLA 120
Query: 951 LVLKRCQETNLVLNWEKCHFMVRDGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGIR 1010
LVL+RCQE+NL+LNWEKCHFMVR+GIVLGHK+S +GIEVD+AKIEVI KL PPTN KGIR
Sbjct: 121 LVLERCQESNLILNWEKCHFMVREGIVLGHKISYKGIEVDQAKIEVISKLHPPTNEKGIR 180
Query: 1011 SFLGHAGFYRRFIKDFSKLAKPMTNLLEKEAPFTFDENCLKAFESIKKSLVTAPVIVAPD 1070
SFLGH GFYRRFI+DFSK+ KP+T LL K+ F FD+ C+ AFE++K LV+AP++VAPD
Sbjct: 181 SFLGHVGFYRRFIRDFSKIEKPLTTLLVKDKDFVFDKECVVAFETLKGKLVSAPIVVAPD 240
Query: 1071 WSLPFEIMCDASDLALGAVLCQKKERVLYVIYYASTVLNEAQRNYTTTEKELLGVVFACE 1130
W LPFEIMCDASD+A+GAVL Q++E+ L+VIYYAS VLN AQ NY TTEKELL +V+A +
Sbjct: 241 WYLPFEIMCDASDIAVGAVLGQRREKRLHVIYYASHVLNPAQMNYATTEKELLVMVYAFD 300
Query: 1131 KFRPYILGFKVVVHTDHAALRHLFAKQDSKPRLIRWVLLLQEFDLEIIDRRGKDNGVADH 1190
KFR Y+LG KV+V+TDHAAL++LF+KQDSKPRL+RW+LLLQEFD+EI D+RG +N VADH
Sbjct: 301 KFRQYMLGSKVIVYTDHAALKYLFSKQDSKPRLLRWILLLQEFDVEIRDKRGCENTVADH 360
Query: 1191 LSRLEGGACSPI--PIQEEFPDEKLLAVSTEEPLPWY 1225
LSR+ + + PI++EF DE +L V +PW+
Sbjct: 361 LSRMSHIEETKVKQPIKDEFADEHILVVI---GVPWF 394
>gb|AAF63114.1| Hypothetical protein [Arabidopsis thaliana] gi|25405147|pir||B96502
hypothetical protein F28H19.8 [imported] - Arabidopsis
thaliana
Length = 640
Score = 579 bits (1492), Expect = e-163
Identities = 280/471 (59%), Positives = 353/471 (74%), Gaps = 17/471 (3%)
Query: 974 DGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKPM 1033
+GIVLGHK+S +GIEVD+AKI+V+ +L P +K IRSFLGHAGFYRRFIKDFSK+A+P+
Sbjct: 170 EGIVLGHKISGKGIEVDKAKIDVMVRLQPLKTVKDIRSFLGHAGFYRRFIKDFSKIARPL 229
Query: 1034 TNLLEKEAPFTFDENCLKAFESIKKSLVTAPVIVAPDWSLPFEIMCDASDLALGAVLCQK 1093
T LL KEA F FDE+CLKAF SIK++LV AP++ AP+W+ PFEIMCDASD A+GAVL Q+
Sbjct: 230 TRLLCKEAEFDFDEDCLKAFHSIKEALVLAPIVQAPNWNHPFEIMCDASDYAVGAVLGQR 289
Query: 1094 KERVLYVIYYASTVLNEAQRNYTTTEKELLGVVFACEKFRPYILGFKVVVHTDHAALRHL 1153
++ L+VIYYAS L++ Q Y TTEKELL VVFA EKFR Y++G KV V+TDHAAL+H+
Sbjct: 290 IDKKLHVIYYASRTLDDTQSRYATTEKELLVVVFAFEKFRSYLVGSKVTVYTDHAALKHI 349
Query: 1154 FAKQDSKPRLIRWVLLLQEFDLEIIDRRGKDNGVADHLSRLEGGACSPIPIQEEFPDEKL 1213
+AK+D+KPRL+RW+L LQEFD+EI+D+RG +NGVADHLSR+ +PI + P+E+L
Sbjct: 350 YAKKDTKPRLLRWILFLQEFDMEIVDKRGSENGVADHLSRMR--MTEAVPIDDSMPEEQL 407
Query: 1214 LAVST--------------EEPLPWYVHFANFRVAGLIPHDLTWQQKKKFLHDAKSYLWD 1259
LAV T LPWYV N+ AG++P +L+ QKKKF D Y WD
Sbjct: 408 LAVGTSFDKFKIETMCATRSGKLPWYVDLVNYLTAGIVPSELSSYQKKKFFRDINHYYWD 467
Query: 1260 DPFLFKICSDGVIRRCIPEVNFEKILWYCHGSSYGGHFSGERTAAKVLQSGFYWPTLNRD 1319
+P L+K DG+ RRCI E + +L CH S YGGHF+ +T KVLQ+G +WP++ +D
Sbjct: 468 EPVLYKKGVDGLFRRCIAEEEVQGVLELCHNSPYGGHFATFKTVQKVLQAGLWWPSMFKD 527
Query: 1320 SRAFVESCDRCQRTGNISRRNEMPLKNILEIELFDVWGIDFMGPF-PPSFGCQYILLAVD 1378
+ + CDRCQR GNISRRNEMP ILE+E+FDVWGIDFMGPF P S+G +YIL+AVD
Sbjct: 528 AHEHITRCDRCQRVGNISRRNEMPQNPILEVEVFDVWGIDFMGPFEPASYGNKYILVAVD 587
Query: 1379 YVSKWVEAAALSTNDSKVVVAFLKKNIFTRFGVPRAIISDGGTHFCNRAFE 1429
YVSKWVEA A TNDSKVV+ K IF RFG+PR +ISDGG+HF N+ FE
Sbjct: 588 YVSKWVEAIASPTNDSKVVLKLFKTIIFPRFGIPRVVISDGGSHFINKVFE 638
>emb|CAD39882.2| OSJNBb0067G11.5 [Oryza sativa (japonica cultivar-group)]
gi|50922247|ref|XP_471484.1| OSJNBb0067G11.5 [Oryza
sativa (japonica cultivar-group)]
Length = 791
Score = 551 bits (1420), Expect = e-155
Identities = 264/439 (60%), Positives = 335/439 (76%), Gaps = 16/439 (3%)
Query: 673 ELTRDEEIPIEEKSELKPLPSSLKYAYLEEGENKPVILNSALTPLEEEKLLRVLRDHKSA 732
E ++E+P K E P L+Y +L PVI++ L+ E + LL VL H+S
Sbjct: 369 EALLEDEVPDFIKEEADP---GLRYDFLHNDREAPVIISDKLSEDETQHLLTVLEKHRSI 425
Query: 733 LGWTIDDIKGISPAICMHKILLEENYKPIVQPQRRLNPSMKDVVRKEIIKLLDAGVIYPI 792
LG+++ D++GI+PA+C H+IL++ P +PQR LN +M++VV+KE++KLL AG+IYPI
Sbjct: 426 LGYSLQDLRGINPALCTHRILIDPESTPSREPQRWLNNAMREVVKKEVLKLLHAGIIYPI 485
Query: 793 SDSEWVSPVQVVPKKGGITVVANENNELIPTRQVTKWRVCIDYRRLNSVTRKDHFPLPFI 852
SEWVSPVQVVPKKGG+TVV +WR+CIDYR+LN T+KDHFPLPFI
Sbjct: 486 PYSEWVSPVQVVPKKGGMTVVY-------------RWRMCIDYRKLNKATKKDHFPLPFI 532
Query: 853 DQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQEKTAFTCPYDVFAYKRMPFGLCNAPATF 912
D+ML++LA H ++CFLDGYSGY+QI + PEDQ KT FTCPY +AY+RM FGLCN PA+F
Sbjct: 533 DEMLERLANHSFFCFLDGYSGYHQIPIHPEDQSKTTFTCPYGTYAYRRMSFGLCNTPASF 592
Query: 913 QRCMFAIFSDLIETCIEIFMDDFSVFGPNFDACLGNLALVLKRCQETNLVLNWEKCHFMV 972
QRCM +IFSD+IE +E+FMDDFSV+G CL NL VL+RCQE +LVLN EKCHFMV
Sbjct: 593 QRCMMSIFSDMIEDIMEVFMDDFSVYGKTLGHCLQNLDKVLQRCQEKDLVLNREKCHFMV 652
Query: 973 RDGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKP 1032
R+GIVLGH+VSERG+EVDRAKI+VI++LPPP NIKGI SF GHAGFYRRFIKDFS +A+P
Sbjct: 653 REGIVLGHRVSERGVEVDRAKIDVIDQLPPPMNIKGIHSFFGHAGFYRRFIKDFSTIARP 712
Query: 1033 MTNLLEKEAPFTFDENCLKAFESIKKSLVTAPVIVAPDWSLPFEIMCDASDLALGAVLCQ 1092
+TNLL K+AP FD+ CLK+FE +KK+LV+AP+I PDW+LPFEIMCDASD A+GAVL Q
Sbjct: 713 LTNLLAKDAPIEFDDVCLKSFEILKKALVSAPIIQPPDWTLPFEIMCDASDFAVGAVLGQ 772
Query: 1093 KKERVLYVIYYASTVLNEA 1111
K++ + I YAS L A
Sbjct: 773 TKDKKHHAICYASKTLTGA 791
Score = 69.3 bits (168), Expect = 1e-09
Identities = 33/109 (30%), Positives = 59/109 (53%)
Query: 3 EDPHAHMERFIRNCNTYRVMNVPSEAIRLSLFPFSLKDAAEDWLNSQPQGSLTTWEDLAE 62
E+P+ H+ F + C+ ++ + E + LFPFSL++ A+ W S +WE L +
Sbjct: 51 ENPYHHLRDFEQVCSCLKIRGMRQETVWWKLFPFSLQERAKQWYTSTVGCVNGSWEKLRD 110
Query: 63 KFTTRFFPRSLLRKLKNDIMTFAQSTDENLYEAWEHFKKLLRKCPQHNL 111
+F FFP + + L+ +I+ F Q +E++ AW F L++ P +L
Sbjct: 111 RFCLTFFPVTRITALRVEILNFKQIENESIGAAWSRFTNLVQSGPTLSL 159
>gb|AAD23707.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|25411232|pir||G84476 probable retroelement pol
polyprotein [imported] - Arabidopsis thaliana
Length = 466
Score = 541 bits (1394), Expect = e-152
Identities = 254/417 (60%), Positives = 317/417 (75%), Gaps = 2/417 (0%)
Query: 1223 PWYVHFANFRVAGLIPHDLTWQQKKKFLHDAKSYLWDDPFLFKICSDGVIRRCIPEVNFE 1282
PWY N+ G+ P +LT ++K F D Y WD+P+L+ +C D + R + E E
Sbjct: 38 PWYADHVNYLACGIEPPNLTSYERKNFFRDIHHYYWDEPYLYTLCKDKIYRSYVSEDEVE 97
Query: 1283 KILWYCHGSSYGGHFSGERTAAKVLQSGFYWPTLNRDSRAFVESCDRCQRTGNISRRNEM 1342
IL +CH S+YGGHF+ +T +K+LQ+GF+WPT+ +D++ FV CD CQR GNISRRNEM
Sbjct: 98 GILLHCHDSAYGGHFATFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKGNISRRNEM 157
Query: 1343 PLKNILEIELFDVWGIDFMGPFPPSFGCQYILLAVDYVSKWVEAAALSTNDSKVVVAFLK 1402
P ILE+++FDVWGIDFMGPFP S+G +YIL+ VDYVSKWVEA A TND+KVV+ K
Sbjct: 158 PQNPILEVDIFDVWGIDFMGPFPSSYGNKYILVVVDYVSKWVEAIASPTNDAKVVLKLFK 217
Query: 1403 KNIFTRFGVPRAIISDGGTHFCNRAFESLLEKYGVKHKVSTPYHPQTSGQVEISNRELKR 1462
IF RFGV +ISDGG HF N+ FE+LL+K+GVKHKV+TPYHPQTSGQVEISNRE+K
Sbjct: 218 TIIFPRFGVSWVVISDGGKHFINKVFENLLKKHGVKHKVATPYHPQTSGQVEISNREIKT 277
Query: 1463 ILEKVVDSSRKDWSRKLDDALWAYRTAFKTPIGTSPFHLVFGKACHLPVELEHKAYWAIR 1522
ILEK V +RKDWS KLDDALWAY+TAFKTPIGT+PF+L+ K+CHL VELE+KA WA++
Sbjct: 278 ILEKTVGITRKDWSTKLDDALWAYKTAFKTPIGTTPFNLLCVKSCHLHVELEYKAMWAVK 337
Query: 1523 KLNFDWKVASEKRLLQLNELDEFRLRAYESASIYKEKTKKWHDRKILNREFVSGQLVLLF 1582
LNFD K A EKRL+QL+ELDE RL AYES+ IYKE+TK +HD+KI+ ++F G VLLF
Sbjct: 338 LLNFDIKTAEEKRLIQLSELDEIRLEAYESSKIYKERTKLFHDKKIITKDFQVGDQVLLF 397
Query: 1583 NSRLRLFPGKLKSRWSGPFVVKRVFPHGAVEVENPETKNTFTVNGQRLKVYHGGEVL 1639
NSRL++FPGKLKSRWSGPF + V P+GAV + FTVNGQRLK Y ++L
Sbjct: 398 NSRLKIFPGKLKSRWSGPFCITEVRPYGAVTLAG--KSGVFTVNGQRLKKYLANQIL 452
>emb|CAB81136.1| putative athila transposon protein [Arabidopsis thaliana]
gi|25407395|pir||D85075 probable athila transposon
protein [imported] - Arabidopsis thaliana
Length = 724
Score = 535 bits (1378), Expect = e-150
Identities = 288/596 (48%), Positives = 389/596 (64%), Gaps = 38/596 (6%)
Query: 452 AILQRKM-PKKRRDPGSFTIPVEIEGLTVVEALCDLGASINLMPLSMFKRLNLGEVTPTM 510
AI Q+K+ PKK DPGSFT+P + L LCDLGA ++LMPLS+ KRL +
Sbjct: 3 AITQKKIVPKKLIDPGSFTLPCSLGPLAFKRCLCDLGALVSLMPLSVAKRLGFTQYKSCN 62
Query: 511 ISLQMADRSLKTPYGIIEDVVVKVDKFVFPVDFVILDMEEDSKVPLILGRPFLATGEAEI 570
ISL +ADRS++ P+ + E++ +++ P DFV+L+M+E+ K PLILGRPFLAT A
Sbjct: 63 ISLILADRSVRIPHSLFENLPIRIGAVDIPTDFVVLEMDEEPKDPLILGRPFLATAGAMN 122
Query: 571 KVAKGTLTLKVGE-DEVLFNIFDSLKHRADE-EVFRCEVVDELVCEEFVRISIKDPLETT 628
V KG + L +G+ + F++ D++K + ++F E +D+L E + +D L +
Sbjct: 123 DVKKGKIDLNLGKYCRMTFDVKDAMKKPTIKGQLFWIEEIDQLADELLEERAEEDHLYSA 182
Query: 629 IMEG-----LEIEDQNLERELDS--------LYHEVNATLSQLECVSSLATKSIW----- 670
+ + L +E ++ LDS + E+N +++ +S + +
Sbjct: 183 LTKRGEDGFLHLETLGYQKLLDSHKAMEESEPFEELNGPETEVMVMSEEGSTQVQPAHSR 242
Query: 671 -------KEELTRDEEIPI----------EEKSELKPLPSSLKYAYLEEGENKPVILNSA 713
++ E+ I K +LK LP L+Y + PVI+N
Sbjct: 243 TYSTNNSTSTISNSGELIIPTSDDWSELKAPKVDLKSLPKGLRYVFFGPNSTYPVIINVE 302
Query: 714 LTPLEEEKLLRVLRDHKSALGWTIDDIKGISPAICMHKILLEENYKPIVQPQRRLNPSMK 773
L E LL LR +K A+G+++ DIK ISP++C H+I LE ++PQRRLN ++K
Sbjct: 303 LNDNEVNLLLSELRKYKRAIGYSLSDIKRISPSLCNHRIHLENESYSSIEPQRRLNLNLK 362
Query: 774 DVVRKEIIKLLDAGVIYPISDSEWVSPVQVVPKKGGITVVANENNELIPTRQVTKWRVCI 833
+VV+KEI+KLLDAGVIYPISDS WV PV VPKKGG+TVV NE +ELIPTR +T RVCI
Sbjct: 363 EVVKKEILKLLDAGVIYPISDSTWVFPVHCVPKKGGMTVVKNEKDELIPTRTITGHRVCI 422
Query: 834 DYRRLNSVTRKDHFPLPFIDQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQEKTAFTCPY 893
DYR+LN+ +RKDHFPLPF +QML+ LA H Y CFLDGYSG+ QI + P DQEKT FTCPY
Sbjct: 423 DYRKLNAASRKDHFPLPFTNQMLEGLANHLYNCFLDGYSGFFQIPIHPNDQEKTTFTCPY 482
Query: 894 DVFAYKRMPFGLCNAPATFQRCMFAIFSDLIETCIEIFMDDFSVFGPNFDACLGNLALVL 953
FAYKRMPFGLCNAP TFQRCM +IFSDLIE +E+FMDDFSV+GP+F +CL NL VL
Sbjct: 483 GTFAYKRMPFGLCNAPTTFQRCMTSIFSDLIEKMVEVFMDDFSVYGPSFSSCLLNLGRVL 542
Query: 954 KRCQETNLVLNWEKCHFMVRDGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGI 1009
+ +ETNLVLNWEKC+FMV++GIVLGHK+SE+GIEVD+ KI+V+ +L PP +K I
Sbjct: 543 TKWEETNLVLNWEKCYFMVKEGIVLGHKISEKGIEVDKEKIKVMMQLQPPKTVKDI 598
Score = 140 bits (352), Expect = 5e-31
Identities = 69/116 (59%), Positives = 91/116 (77%), Gaps = 2/116 (1%)
Query: 1101 IYYASTVLNEAQRNYTTTEKELLGVVFACEKFRPYILGFKVVVHTDHAALRHLFAKQDSK 1160
IYYAS L+EAQ Y TTEKELL VVFA +KFR Y++ KV V+TDHAALRH++AK+D+K
Sbjct: 598 IYYASRTLDEAQGRYATTEKELLVVVFAFKKFRSYLVESKVTVYTDHAALRHMYAKKDTK 657
Query: 1161 PRLIRWVLLLQEFDLEIIDRRGKDNGVADHLSRLEGGACSPIPIQEEFPDEKLLAV 1216
PRL+R +LLLQEFD+EI++++G +NG ADHLSR+ PI I + P+E+L+ V
Sbjct: 658 PRLLRGILLLQEFDMEIVEKKGIENGAADHLSRMR--IEEPILIDDSMPEEQLMVV 711
>gb|AAV43951.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 963
Score = 527 bits (1357), Expect = e-147
Identities = 317/734 (43%), Positives = 427/734 (57%), Gaps = 84/734 (11%)
Query: 336 HEPEEKIEGDKNEE-------AEVERDEGVMEERAREPTRTRVVNTHTPELRKIPFPKAL 388
+EP+ + K EE AE ++E+ E TP+ I F
Sbjct: 291 NEPQPEASVSKIEEPLTIEPLAEPSTFASSIDEKVPEQPSVENEEIQTPDCATILF---- 346
Query: 389 VKKNLDK*FSKFLEVFKKLHINIPFSEALEQMPIYAKFMKDILSKRRKLSEV--DETILM 446
K D+ + L F K +P P+ +F+++ + R+L+ + DE +
Sbjct: 347 -KDGFDEDYGNTLNYFSKRKPLVPLPPP---DPMELRFLRETI---RELTTIMSDEWLRE 399
Query: 447 TEECSAILQRKMPKKRRDPGSFTIPVEIEGLTVVEALCDLGASINLMPLSM-FKRLNLGE 505
E S ++ R + IP +EG V L NL+ S F L+
Sbjct: 400 AELSSEVI-------RINTAPRIIPCHLEG-NDVSILYSPTVGANLVSGSFAFAYLSDKA 451
Query: 506 VTPTMISLQMADRSLKTPYGIIEDVVVKVDKFVFPVDFVILDMEEDSKVPLILGRPFLAT 565
VTPT + ++ +GI++DV V + +DF + ++++ +++G P
Sbjct: 452 VTPTNKFFKHPSGNIIKRFGIMQDVPVCFEDKEAILDFHVFEIQD---FDILIGLPI--- 505
Query: 566 GEAEIKVAKGTLTLKVGEDEVLFNI--FDSLKHRADEEVFRCEVVDELVCEEFVRISIKD 623
+++L N DSLK E F RI + D
Sbjct: 506 ------------------EQLLINTPRLDSLKITLGETEFSIPF-------SRARIVLTD 540
Query: 624 PLETTIMEGLEIEDQNLERELDSLYHEVNATLSQLECVSSLATKSIWKEELTRDE--EIP 681
PL E ++ E + HE L + E + KEE E ++P
Sbjct: 541 PLP---------EIESTEEVIAVPPHESPEALLEDEVPDFI------KEEADPGETLDLP 585
Query: 682 IEEKS-----ELKPLPSSLKYAYLEEGENKPVILNSALTPLEEEKLLRVLRDHKSALGWT 736
I E ELKPLP SL YA+L PVI++ L E ++LL VL H S LG++
Sbjct: 586 IMEPPPWPPLELKPLPPSLHYAFLHHDREAPVIISDKLFEDETQRLLAVLEKHCSVLGYS 645
Query: 737 IDDIKGISPAICMHKILLEENYKPIVQPQRRLNPSMKDVVRKEIIKLLDAGVIYPISDSE 796
+ D+KGI+P +C+H+I ++ P +PQRRLN +M++VV+KE++KLL AG+IYP+ SE
Sbjct: 646 LQDLKGINPVLCIHRIPIDPESTPSREPQRRLNNAMREVVKKEVLKLLHAGIIYPVPYSE 705
Query: 797 WVSPVQVVPKKGGITVVANENNELIPTRQVTKWRVCIDYRRLNSVTRKDHFPLPFIDQML 856
WVSPVQVVPKKGGI VVAN NELIP R VT+WR+CIDYR+LN T+KDHFPLPFID+ML
Sbjct: 706 WVSPVQVVPKKGGIMVVANAQNELIPQRTVTEWRMCIDYRKLNKATKKDHFPLPFIDEML 765
Query: 857 DKLAGHQYYCFLDGYSGYNQICVAPEDQEKTAFTCPYDVFAYKRMPFGLCNAPATFQRCM 916
++LA H ++CFLDGYSGY+QI + PEDQ KT FTCPY +AY+RM FGLCNAPA+FQRCM
Sbjct: 766 ERLANHSFFCFLDGYSGYHQIPIHPEDQSKTTFTCPYGTYAYRRMSFGLCNAPASFQRCM 825
Query: 917 FAIFSDLIETCIEIFMDDFSVFGPNFDACLGNLALVLKRCQETNLVLNWEKCHFMVRDGI 976
+IFSD+IE +E+FMDDF V+G F L NL VL+RCQE +LVLNWEKCHFMVR+GI
Sbjct: 826 MSIFSDMIEYIMEVFMDDFLVYGKTFGHYLQNLDKVLQRCQEKDLVLNWEKCHFMVREGI 885
Query: 977 VLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKPMTNL 1036
VLGH+VSERGIEVDRAKI+VI++LPPP NIKGIRSFLGHA FYRRFI+D+S + +P+TNL
Sbjct: 886 VLGHRVSERGIEVDRAKIDVIDQLPPPVNIKGIRSFLGHASFYRRFIEDYSTIVRPLTNL 945
Query: 1037 LEKEAPFTFDENCL 1050
L K+APF FD+ CL
Sbjct: 946 LAKDAPFEFDDACL 959
>gb|AAT81690.1| putative reverse transcriptase [Oryza sativa (japonica
cultivar-group)]
Length = 1017
Score = 527 bits (1357), Expect = e-147
Identities = 328/792 (41%), Positives = 453/792 (56%), Gaps = 101/792 (12%)
Query: 310 KFSSETLTLIEQ--ENTAVVSTRSGRVLHEPEEKIEGDKNEE--AEVERDEGVMEERARE 365
K SE T++++ ENT+ ++ + L KIE E AE ++E+ E
Sbjct: 315 KTPSEGKTILDRILENTSFMTQSNEPQLEASVSKIEEPLTIEPFAEPSTSASSIDEKVPE 374
Query: 366 PTRTRVVNTHTPELRKIPFPKALVKKNLDK*FSKFLEVFKKLHINIPFSEALEQMPIYAK 425
+ TP+ I F + D + L F K +P S P+
Sbjct: 375 QPSVKNEEIQTPDCATIMF-----RDGFDVDYGNTLNYFSKRKPPVPLSPP---DPMELG 426
Query: 426 FMKDILSKRRKLSEVDETILMTEECSAILQRKMPKKRRDPGSFTIPVEIEGLTVVEALCD 485
F+++ + R+L T +M++E + R + IP +EG V L
Sbjct: 427 FLRETV---REL-----TSIMSDEWQREAELSSEVIRINTAPRIIPCHLEG-NDVGILYS 477
Query: 486 LGASINLMPLSM-FKRLNLGEVTPTMISLQMADRSLKTPYGIIEDVVVKVDKFVFPVDFV 544
NL+ +S F L+ VTPT + +R++ +GI++DV V + +DF
Sbjct: 478 PTIGANLISVSFAFAYLSDKAVTPTNKFFKHPNRNIIEGFGIVQDVPVFFEDREAILDFH 537
Query: 545 ILDMEEDSKVPLILGRPFLATGEAEIKVAK-GTLTLKVGEDEVLFNIFDSLKHRADEEVF 603
+ ++++ +++G P + I ++ G+L + +GE+E F RA
Sbjct: 538 VFEIQD---FDILIGLPI---EQLLINTSRLGSLKITLGENE-----FSIPFSRA----- 581
Query: 604 RCEVVDELVCEEFVRISIKDPLETTIMEGLEIEDQNLERELDSLYHEVNATLSQLECVSS 663
RI++ DPL T ++ E HE L + E
Sbjct: 582 --------------RITLTDPLPET---------ESAEEVTAVPPHESTKALLEDEVPDF 618
Query: 664 LATKSIWKEELTRDEEIPIEEKS-----ELKPLPSSLKYAYLEEGENKPVILNSALTPLE 718
+ ++ E L ++PI E ELKPLP L+YA+L PVI++ L+ E
Sbjct: 619 IKEEADPSETL----DLPIMEPPPRPPLELKPLPPGLRYAFLHNDREAPVIISDKLSEDE 674
Query: 719 EEKLLRVLRDHKSALGWTIDDIKGISPAICMHKILLEENYKPIVQPQRRLNPSMKDVVRK 778
++LL VL H+S LG+++ D++GI+PA+C H+I ++ P +PQRRLN +M++VV+K
Sbjct: 675 TQRLLTVLEKHRSILGYSLQDLRGINPALCTHRIPIDLESTPSREPQRRLNNAMREVVKK 734
Query: 779 EIIKLLDAGVIYPISDSEWVSPVQVVPKKGGITVVANENNELIPTRQVTKWRVCIDYRRL 838
E++KLL AG+IYP+ SEWVS VQV+PKKGG+TVVAN NELIP R VT WR+CIDYR+L
Sbjct: 735 EVLKLLHAGIIYPVPYSEWVSKVQVMPKKGGMTVVANSQNELIPQRTVTGWRMCIDYRKL 794
Query: 839 NSVTRKDHFPLPFIDQMLDKLAGHQYYCFLDGYSGYNQICVAPEDQEKTAFTCPYDVFAY 898
N T+KDHF LPF D+ML+ LA H ++CFLDG
Sbjct: 795 NKATKKDHFLLPFNDEMLEWLANHSFFCFLDG---------------------------- 826
Query: 899 KRMPFGLCNAPATFQRCMFAIFSDLIETCIEIFMDDFSVFGPNFDACLGNLALVLKRCQE 958
M FGLCNAPA FQRCM +IFSD+IE +E+FMDDFSV+G F CL NL VL+RCQE
Sbjct: 827 --MSFGLCNAPAPFQRCMMSIFSDMIEDIMEVFMDDFSVYGKTFGHCLQNLDKVLQRCQE 884
Query: 959 TNLVLNWEKCHFMVRDGIVLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGIRSFLGHAGF 1018
+LVLNWEKCHFMVR+GI+LGH+VSERG EVDRAKI+VI++LPP NIKGI SFLGHAGF
Sbjct: 885 KDLVLNWEKCHFMVREGIILGHRVSERGSEVDRAKIDVIDQLPPLVNIKGIHSFLGHAGF 944
Query: 1019 YRRFIKDFSKLAKPMTNLLEKEAPFTFDENCLKAFESIKKSLVTAPVIVAPDWSLPFEIM 1078
YRRFIKDFS +A+P+TNLL K+APF FD+ CLK+FE +KK+LV AP+I PDW+LPFEIM
Sbjct: 945 YRRFIKDFSIIARPLTNLLAKDAPFEFDDACLKSFEILKKALVFAPIIQPPDWTLPFEIM 1004
Query: 1079 CDASDLALGAVL 1090
CDASD A+ AVL
Sbjct: 1005 CDASDFAVAAVL 1016
>gb|AAV43847.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1005
Score = 523 bits (1346), Expect = e-146
Identities = 315/731 (43%), Positives = 425/731 (58%), Gaps = 84/731 (11%)
Query: 336 HEPEEKIEGDKNEE-------AEVERDEGVMEERAREPTRTRVVNTHTPELRKIPFPKAL 388
+EP+ + K EE AE ++E+ E TP+ I F
Sbjct: 296 NEPQPEASVSKIEEPLTIEPLAEPSTFASSIDEKVPEQPSVENEEIQTPDCATILF---- 351
Query: 389 VKKNLDK*FSKFLEVFKKLHINIPFSEALEQMPIYAKFMKDILSKRRKLSEV--DETILM 446
K D+ + L F K +P P+ +F+++ + R+L+ + DE +
Sbjct: 352 -KDGFDEDYGNTLNYFSKRKPLVPLPPP---DPMELRFLRETI---RELTTIMSDEWLRE 404
Query: 447 TEECSAILQRKMPKKRRDPGSFTIPVEIEGLTVVEALCDLGASINLMPLSM-FKRLNLGE 505
E S ++ R + IP +EG V L NL+ S F L+
Sbjct: 405 AELSSEVI-------RINTAPRIIPCHLEG-NDVSILYSPTVGANLVSGSFAFAYLSDKA 456
Query: 506 VTPTMISLQMADRSLKTPYGIIEDVVVKVDKFVFPVDFVILDMEEDSKVPLILGRPFLAT 565
VTPT + ++ +GI++DV V + +DF + ++++ +++G P
Sbjct: 457 VTPTNKFFKHPSGNIIKRFGIMQDVPVCFEDKEAILDFHVFEIQD---FDILIGLPI--- 510
Query: 566 GEAEIKVAKGTLTLKVGEDEVLFNI--FDSLKHRADEEVFRCEVVDELVCEEFVRISIKD 623
+++L N DSLK E F RI + D
Sbjct: 511 ------------------EQLLINTPRLDSLKITLGETEFSIPF-------SRARIVLTD 545
Query: 624 PLETTIMEGLEIEDQNLERELDSLYHEVNATLSQLECVSSLATKSIWKEELTRDE--EIP 681
PL E ++ E + HE L + E + KEE E ++P
Sbjct: 546 PLP---------EIESTEEVIAVPPHESPEALLEDEVPDFI------KEEADPGETLDLP 590
Query: 682 IEEKS-----ELKPLPSSLKYAYLEEGENKPVILNSALTPLEEEKLLRVLRDHKSALGWT 736
I E ELKPLP SL YA+L PVI++ L E ++LL VL H S LG++
Sbjct: 591 IMEPPPWPPLELKPLPPSLHYAFLHHDREAPVIISDKLFEDETQRLLAVLEKHCSVLGYS 650
Query: 737 IDDIKGISPAICMHKILLEENYKPIVQPQRRLNPSMKDVVRKEIIKLLDAGVIYPISDSE 796
+ D+KGI+P +C+H+I ++ P +PQRRLN +M++VV+KE++KLL AG+IYP+ SE
Sbjct: 651 LQDLKGINPVLCIHRIPIDPESTPSREPQRRLNNAMREVVKKEVLKLLHAGIIYPVPYSE 710
Query: 797 WVSPVQVVPKKGGITVVANENNELIPTRQVTKWRVCIDYRRLNSVTRKDHFPLPFIDQML 856
WVSPVQVVPKKGGI VVAN NELIP R VT+WR+CIDYR+LN T+KDHFPLPFID+ML
Sbjct: 711 WVSPVQVVPKKGGIMVVANAQNELIPQRTVTEWRMCIDYRKLNKATKKDHFPLPFIDEML 770
Query: 857 DKLAGHQYYCFLDGYSGYNQICVAPEDQEKTAFTCPYDVFAYKRMPFGLCNAPATFQRCM 916
++LA H ++CFLDGYSGY+QI + PEDQ KT FTCPY +AY+RM FGLCNAPA+FQRCM
Sbjct: 771 ERLANHSFFCFLDGYSGYHQIPIHPEDQSKTTFTCPYGTYAYRRMSFGLCNAPASFQRCM 830
Query: 917 FAIFSDLIETCIEIFMDDFSVFGPNFDACLGNLALVLKRCQETNLVLNWEKCHFMVRDGI 976
+IFSD+IE +E+FMDDF V+G F L NL VL+RCQE +LVLNWEKCHFMVR+GI
Sbjct: 831 MSIFSDMIEYIMEVFMDDFLVYGKTFGHYLQNLDKVLQRCQEKDLVLNWEKCHFMVREGI 890
Query: 977 VLGHKVSERGIEVDRAKIEVIEKLPPPTNIKGIRSFLGHAGFYRRFIKDFSKLAKPMTNL 1036
VLGH+VSERGIEVDRAKI+VI++LPPP NIKGIRSFLGHA FYRRFI+D+S + +P+TNL
Sbjct: 891 VLGHRVSERGIEVDRAKIDVIDQLPPPVNIKGIRSFLGHASFYRRFIEDYSTIVRPLTNL 950
Query: 1037 LEKEAPFTFDE 1047
L K+APF FD+
Sbjct: 951 LAKDAPFEFDD 961
>emb|CAD40178.2| OSJNBa0061A09.17 [Oryza sativa (japonica cultivar-group)]
gi|50921885|ref|XP_471303.1| OSJNBa0061A09.17 [Oryza
sativa (japonica cultivar-group)]
Length = 430
Score = 460 bits (1183), Expect = e-127
Identities = 220/445 (49%), Positives = 301/445 (67%), Gaps = 16/445 (3%)
Query: 1078 MCDASDLALGAVLCQKKERVLYVIYYASTVLNEAQRNYTTTEKELLGVVFACEKFRPYIL 1137
MCDAS+ A+GAVL Q K+R + I YAS L AQ NY+TTEKELL VV
Sbjct: 1 MCDASNFAVGAVLGQTKDRKQHAIAYASKTLTGAQLNYSTTEKELLAVV----------- 49
Query: 1138 GFKVVVHTDHAALRHLFAKQDSKPRLIRWVLLLQEFDLEIIDRRGKDNGVADHLSRLEGG 1197
G KVVV+TDHAAL++L K+D+KPRLIRW+L+LQEFD+EI +++G +N VADHLSR++
Sbjct: 50 GAKVVVYTDHAALKYLLTKKDAKPRLIRWILILQEFDIEINNKKGIENSVADHLSRMQIT 109
Query: 1198 ACSPIPIQEEFPDEKLLAVSTEEPLPWYVHFANFRVAGLIPHDLTWQQKKKFLHDAKSYL 1257
+ I + D+ LL V+ +P WY NF VA +P + KK+ ++++ L
Sbjct: 110 NMQELSINDYLRDDMLLKVTDSDP--WYAPIVNFMVAWHVPPG---ENKKRLSYESRKRL 164
Query: 1258 WDDPFLFKICSDGVIRRCIPEVNFEKILWYCHGSSYGGHFSGERTAAKVLQSGFYWPTLN 1317
WD P+L+++CSD ++RRC+P +I+ C + YG H+ RT AK+ QSGF+WPT+
Sbjct: 165 WDAPYLYRVCSDSLLRRCVPADEGMEIIEKCRVAPYGSHYGAFRTHAKIWQSGFFWPTMY 224
Query: 1318 RDSRAFVESCDRCQRTGNISRRNEMPLKNILEIELFDVWGIDFMGPFPPSFGCQYILLAV 1377
D++ F+ C CQ+ G I+ ++ MPL L++ELFDVWGIDFMGPFP + C+YIL+AV
Sbjct: 225 GDTKEFIRRCTSCQKHGGITAQDAMPLTYNLQVELFDVWGIDFMGPFPKFYDCEYILVAV 284
Query: 1378 DYVSKWVEAAALSTNDSKVVVAFLKKNIFTRFGVPRAIISDGGTHFCNRAFESLLEKYGV 1437
DYVSKWVEA ++K + IF FG PR +ISDGG+HF ++ F++ L++ G
Sbjct: 285 DYVSKWVEAMPCRAANTKHAHRMFDEIIFPCFGTPRTVISDGGSHFIDKTFQNFLQELGA 344
Query: 1438 KHKVSTPYHPQTSGQVEISNRELKRILEKVVDSSRKDWSRKLDDALWAYRTAFKTPIGTS 1497
+H + TPYHP+T GQ E N+++ IL+K V+ K W KL +ALWAYRT + PIG S
Sbjct: 345 QHNIVTPYHPKTGGQAETRNKQIMNILQKTVNEMGKAWKNKLPNALWAYRTTYNMPIGMS 404
Query: 1498 PFHLVFGKACHLPVELEHKAYWAIR 1522
P+ LV+GK CHLPVELEHKA+WAIR
Sbjct: 405 PYQLVYGKTCHLPVELEHKAHWAIR 429
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,820,739,037
Number of Sequences: 2540612
Number of extensions: 123015511
Number of successful extensions: 392013
Number of sequences better than 10.0: 18806
Number of HSP's better than 10.0 without gapping: 4986
Number of HSP's successfully gapped in prelim test: 13824
Number of HSP's that attempted gapping in prelim test: 361444
Number of HSP's gapped (non-prelim): 36700
length of query: 1649
length of database: 863,360,394
effective HSP length: 142
effective length of query: 1507
effective length of database: 502,593,490
effective search space: 757408389430
effective search space used: 757408389430
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0330.2