BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0323a.14
(219 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_913091.1| putative thaumatin-like protein [Oryza sativa (... 86 6e-16
gb|AAR24653.1| At5g40020 [Arabidopsis thaliana] gi|10176994|dbj|... 74 3e-12
emb|CAC10270.1| thaumatin-like protein [Malus x domestica] gi|30... 73 6e-12
gb|AAC36740.1| thaumatin-like protein precursor Mdtl1 [Malus x d... 73 6e-12
pir||JC7201 thaumatin-like protein 1 - apple tree 73 6e-12
gb|AAM12886.1| thaumatine-like protein [Malus x domestica] 72 8e-12
gb|AAM12887.1| thaumatine-like protein [Malus x domestica] gi|30... 72 1e-11
ref|NP_193559.2| receptor serine/threonine kinase, putative [Ara... 72 1e-11
gb|AAM00216.1| thaumatin-like protein [Prunus persica] gi|250914... 71 2e-11
sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 precursor gi|32418... 71 2e-11
emb|CAE02112.2| OSJNBa0019G23.3 [Oryza sativa (japonica cultivar... 71 2e-11
emb|CAC09477.1| thaumatin-like protein [Oryza sativa (indica cul... 71 2e-11
dbj|BAC78212.1| thaumatin/PR5-like protein [Pyrus pyrifolia] 70 3e-11
emb|CAB81510.1| thaumatin-like protein [Arabidopsis thaliana] gi... 69 1e-10
gb|AAS79334.1| thamatin-like PR5 [Malus x domestica] 69 1e-10
gb|AAF06347.1| SCUTL2 [Vitis vinifera] 68 2e-10
gb|AAM00215.1| thaumatin-like protein [Prunus persica] gi|250914... 68 2e-10
gb|AAF06346.1| SCUTL1 [Vitis vinifera] 68 2e-10
dbj|BAD45633.1| putative thaumatin-protein [Oryza sativa (japoni... 67 3e-10
emb|CAE59849.1| Hypothetical protein CBG03322 [Caenorhabditis br... 67 3e-10
>ref|NP_913091.1| putative thaumatin-like protein [Oryza sativa (japonica
cultivar-group)] gi|27261063|dbj|BAC45177.1| putative
thaumatin-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 249
Score = 86.3 bits (212), Expect = 6e-16
Identities = 41/108 (37%), Positives = 55/108 (49%), Gaps = 2/108 (1%)
Query: 114 FNLPVTIYSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCSAV 173
FN+PV + C + C D+ + CP LA+ +GG VGCK+ C G LCC
Sbjct: 141 FNVPVQVAPSGAGCSAVACAADIDASCPAELAVKGAGGAVVGCKSGCLAFGRDDLCCRGA 200
Query: 174 YAFPKKCELNDYRQLVDDNCPYFISNAFN--QTHFTCYGTASYVISFC 219
Y P KC + Y + D CP S A++ + FTC ASY I+FC
Sbjct: 201 YGTPDKCPPSQYSKFFKDKCPQAYSYAYDDKSSTFTCTSGASYQITFC 248
>gb|AAR24653.1| At5g40020 [Arabidopsis thaliana] gi|10176994|dbj|BAB10226.1|
thaumatin-like protein [Arabidopsis thaliana]
gi|15242552|ref|NP_198818.1| pathogenesis-related
thaumatin family protein [Arabidopsis thaliana]
Length = 256
Score = 73.9 bits (180), Expect = 3e-12
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 114 FNLPVTIYS--VDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
+NLPV + S V KC + C D+ + CP+ L + + G V CK+AC + + CC
Sbjct: 139 YNLPVVVNSKPVSSKCTILGCHKDLKTTCPEELQVLNEEGRVVACKSACLAFDNDRFCCR 198
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAFNQTH--FTCYGTASYVISFC 219
Y P+KC+ N Y L + CP + S A+ TC Y+I+FC
Sbjct: 199 NAYGTPEKCKRNTYSMLFKEACPNYYSYAYETPPPLVTC-SAKEYLITFC 247
>emb|CAC10270.1| thaumatin-like protein [Malus x domestica]
gi|30316292|sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein
1a precursor (Allergen Mal d 2) (Mdtl1)
(Pathogenesis-related protein 5a) (PR-5a)
Length = 246
Score = 72.8 bits (177), Expect = 6e-12
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 114 FNLPVTI--YSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
FNLP+++ +CK C ++ CP L + + G + CK+AC GD K CC+
Sbjct: 136 FNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCT 195
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAFNQTH--FTCYGTASYVISFC 219
P+ C +Y ++ + CP S A++ + FTC G YVI+FC
Sbjct: 196 PPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 245
>gb|AAC36740.1| thaumatin-like protein precursor Mdtl1 [Malus x domestica]
Length = 245
Score = 72.8 bits (177), Expect = 6e-12
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 114 FNLPVTI--YSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
FNLP+++ +CK C ++ CP L + + G + CK+AC GD K CC+
Sbjct: 135 FNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCT 194
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAFNQTH--FTCYGTASYVISFC 219
P+ C +Y ++ + CP S A++ + FTC G YVI+FC
Sbjct: 195 PPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 244
>pir||JC7201 thaumatin-like protein 1 - apple tree
Length = 247
Score = 72.8 bits (177), Expect = 6e-12
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 114 FNLPVTI--YSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
FNLP+++ +CK C ++ CP L + + G + CK+AC GD K CC+
Sbjct: 137 FNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCT 196
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAFNQTH--FTCYGTASYVISFC 219
P+ C +Y ++ + CP S A++ + FTC G YVI+FC
Sbjct: 197 PPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 246
>gb|AAM12886.1| thaumatine-like protein [Malus x domestica]
Length = 212
Score = 72.4 bits (176), Expect = 8e-12
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 114 FNLPVTI--YSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
FNLP+++ +CK C ++ CP L + + G + CK+AC GD K CC+
Sbjct: 102 FNLPMSVAPQGGTGECKPSSCPANVNKACPAQLQVKAADGSVISCKSACLAFGDSKYCCT 161
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAFNQTH--FTCYGTASYVISFC 219
P+ C +Y ++ + CP S A++ + FTC G YVI+FC
Sbjct: 162 PPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 211
>gb|AAM12887.1| thaumatine-like protein [Malus x domestica]
gi|30316195|sp|P83336|TP1B_MALDO Thaumatin-like protein
1b (Pathogenesis-related protein 5b) (PR-5b)
Length = 212
Score = 72.0 bits (175), Expect = 1e-11
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 114 FNLPVTI--YSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
FNLP+++ +CK C ++ CP L + + G + CK+AC GD K CC+
Sbjct: 102 FNLPMSVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCT 161
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAFNQTH--FTCYGTASYVISFC 219
P+ C +Y ++ + CP S A++ + FTC G YVI+FC
Sbjct: 162 PPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 211
>ref|NP_193559.2| receptor serine/threonine kinase, putative [Arabidopsis thaliana]
Length = 853
Score = 72.0 bits (175), Expect = 1e-11
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 112 YNFNLPVTIYSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
+ +NLP+T+ + C C+VD+ CP+ L + GL V CK+AC + CC+
Sbjct: 327 FGYNLPLTVVPSNPACISSGCMVDLNKTCPNDLKEFSRRGL-VACKSACRQSASDENCCT 385
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAF--NQTHFTCYGTASYVISFC 219
+ + + C+ Y Q D CP S F N + FTC + YVI+FC
Sbjct: 386 NYFKYKQTCKPTPYVQNFDRACPSAYSYPFSGNNSTFTCTNSTDYVITFC 435
Score = 45.4 bits (106), Expect = 0.001
Identities = 29/110 (26%), Positives = 44/110 (39%), Gaps = 3/110 (2%)
Query: 110 HGYNFNLPVTIYSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLC 169
+GYN L V C C+V++ CP L L V C + C + C
Sbjct: 113 YGYNLPLMVVPSQRSRTCISAGCVVELKKTCPKDLMKMSRENL-VACSSTCMEFDTPEAC 171
Query: 170 CSAVYAFPKKCELNDYRQLVDDNCPYFISNAF--NQTHFTCYGTASYVIS 217
C+ + + C+ Y Q + CP A+ N + TC + YVI+
Sbjct: 172 CTRDFKSKQNCKPTVYTQNFERACPLAHIYAYDDNNSTVTCLNSTDYVIT 221
>gb|AAM00216.1| thaumatin-like protein [Prunus persica]
gi|25091405|sp|P83332|TLP1_PRUPE Thaumatin-like protein
1 precursor (PpAZ44)
Length = 246
Score = 71.2 bits (173), Expect = 2e-11
Identities = 38/110 (34%), Positives = 54/110 (48%), Gaps = 4/110 (3%)
Query: 114 FNLPVTI--YSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
FNLP+++ KCK C D+ CP L + S G + CK+AC K CC+
Sbjct: 136 FNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCT 195
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAFN--QTHFTCYGTASYVISFC 219
P+ C DY +L CP S A++ + FTC G +Y+I+FC
Sbjct: 196 PPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFC 245
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 precursor gi|3241854|dbj|BAA28872.1|
thaumatin-like protein precursor [Pyrus pyrifolia]
Length = 244
Score = 71.2 bits (173), Expect = 2e-11
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 114 FNLPVTIY----SVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLC 169
FNLP+ + S D C C ++ + CP L+ S G +GCK+AC + + C
Sbjct: 134 FNLPIKLAPRGGSGD--CNSTSCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYC 191
Query: 170 CSAVYAFPKKCELNDYRQLVDDNCPYFISNAFN--QTHFTCYGTASYVISFC 219
C+ Y P C D+ ++ + CP S A++ + FTC+G +Y I+FC
Sbjct: 192 CTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFC 243
>emb|CAE02112.2| OSJNBa0019G23.3 [Oryza sativa (japonica cultivar-group)]
gi|50930101|ref|XP_474578.1| OSJNBa0019G23.3 [Oryza
sativa (japonica cultivar-group)]
Length = 276
Score = 70.9 bits (172), Expect = 2e-11
Identities = 35/113 (30%), Positives = 53/113 (45%), Gaps = 7/113 (6%)
Query: 114 FNLPVTIYSVDL-----KCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKL 168
FN+PV + C + C D+ + CP L + G V C++AC +
Sbjct: 161 FNVPVRLAPSSSGGGGGDCHAVSCAGDVNAACPSDLRVVSGAGAVVACRSACDAYRSARY 220
Query: 169 CCSAVYAFPKKCELNDYRQLVDDNCPYFISNAFN--QTHFTCYGTASYVISFC 219
CC+ Y P C DY Q+ CP S A++ + FTC+G +SY ++FC
Sbjct: 221 CCTGAYGSPAACGPTDYSQVFKAACPAAYSYAYDDASSTFTCFGASSYDVTFC 273
>emb|CAC09477.1| thaumatin-like protein [Oryza sativa (indica cultivar-group)]
Length = 264
Score = 70.9 bits (172), Expect = 2e-11
Identities = 35/113 (30%), Positives = 53/113 (45%), Gaps = 7/113 (6%)
Query: 114 FNLPVTIYSVDL-----KCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKL 168
FN+PV + C + C D+ + CP L + G V C++AC +
Sbjct: 149 FNVPVRLAPSSSGGGGGDCHAVSCAGDVNAACPSDLRVVSGAGAVVACRSACDAYRSARY 208
Query: 169 CCSAVYAFPKKCELNDYRQLVDDNCPYFISNAFN--QTHFTCYGTASYVISFC 219
CC+ Y P C DY Q+ CP S A++ + FTC+G +SY ++FC
Sbjct: 209 CCTGAYGSPAACGPTDYSQVFKAACPAAYSYAYDDASSTFTCFGASSYDVTFC 261
>dbj|BAC78212.1| thaumatin/PR5-like protein [Pyrus pyrifolia]
Length = 244
Score = 70.5 bits (171), Expect = 3e-11
Identities = 36/112 (32%), Positives = 56/112 (49%), Gaps = 8/112 (7%)
Query: 114 FNLPVTIY----SVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLC 169
FNLP+ + S D C C ++ + CP L+ S G +GCK+AC + + C
Sbjct: 134 FNLPIKLAPRGGSGD--CNSTSCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYC 191
Query: 170 CSAVYAFPKKCELNDYRQLVDDNCPYFISNAFN--QTHFTCYGTASYVISFC 219
C+ Y P C D+ ++ CP S A++ + FTC+G +Y I+FC
Sbjct: 192 CTGAYGTPDTCPPTDFSKVFKKQCPQAYSYAYDDKSSTFTCFGGPNYEITFC 243
>emb|CAB81510.1| thaumatin-like protein [Arabidopsis thaliana]
gi|3036805|emb|CAA18495.1| thaumatin-like protein
[Arabidopsis thaliana] gi|21280949|gb|AAM44961.1|
putative thaumatin protein [Arabidopsis thaliana]
gi|13430506|gb|AAK25875.1| putative thaumatin protein
[Arabidopsis thaliana] gi|15233437|ref|NP_195325.1|
pathogenesis-related thaumatin family protein
[Arabidopsis thaliana] gi|7442167|pir||T05493
pathogenesis-related protein 19K4.140 - Arabidopsis
thaliana
Length = 301
Score = 68.6 bits (166), Expect = 1e-10
Identities = 38/116 (32%), Positives = 57/116 (48%), Gaps = 11/116 (9%)
Query: 114 FNLPVTIY--------SVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGD 165
+N+P+TI V C C+ ++ CP L + +G V CK+AC G
Sbjct: 135 YNIPMTIVPQGGGDAGGVAGNCTTTGCVAELNGPCPAQLKVATTGAEGVACKSACEAFGT 194
Query: 166 QKLCCSAVYAFPKKCELNDYRQLVDDNCPYFISNAFNQ--THFTCYGTASYVISFC 219
+ CCS + P C+ ++Y Q + CP S A++ + FTC G A YVI+FC
Sbjct: 195 PEYCCSGAFGTPDTCKPSEYSQFFKNACPRAYSYAYDDGTSTFTC-GGADYVITFC 249
>gb|AAS79334.1| thamatin-like PR5 [Malus x domestica]
Length = 182
Score = 68.6 bits (166), Expect = 1e-10
Identities = 35/110 (31%), Positives = 55/110 (49%), Gaps = 4/110 (3%)
Query: 114 FNLPVTI--YSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
FNLP+++ +CK C ++ CP L + + G + CK+AC GD K C +
Sbjct: 72 FNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCYT 131
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAFNQTH--FTCYGTASYVISFC 219
P+ C +Y ++ + CP S A++ + FTC G YVI+FC
Sbjct: 132 PPNNAPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 181
>gb|AAF06347.1| SCUTL2 [Vitis vinifera]
Length = 243
Score = 68.2 bits (165), Expect = 2e-10
Identities = 36/110 (32%), Positives = 55/110 (49%), Gaps = 2/110 (1%)
Query: 111 GYNFNLPVTIYSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCC 170
GYN + + C+ C+ D+ S CP L I DSG + V CK+AC + CC
Sbjct: 131 GYNVGMSIESSGGTGDCQRAGCVADLNSNCPAELQITDSGSV-VACKSACAAFNTAQYCC 189
Query: 171 SAVYAFPKKCELNDYRQLVDDNCPYFISNAFNQTHFTCYGT-ASYVISFC 219
+ ++ P+ C Y ++ CP S A++ TC T A+Y+I+FC
Sbjct: 190 TGDHSTPQTCSPTQYSEIFKKACPTAYSYAYDDPTSTCTCTGANYLITFC 239
>gb|AAM00215.1| thaumatin-like protein [Prunus persica]
gi|25091406|sp|P83335|TLP2_PRUPE Thaumatin-like protein
2 precursor (PpAZ8)
Length = 242
Score = 67.8 bits (164), Expect = 2e-10
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 111 GYNFNLPVTIYSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCC 170
G+N + VT CK C ++ CP L S G V C +AC G+ + CC
Sbjct: 131 GFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCC 190
Query: 171 SAVYAFPKKCELNDYRQLVDDNCPYFISNAF--NQTHFTCYGTASYVISFC 219
+ +KC +Y Q+ + CP S AF N+ FTC G +Y+I+FC
Sbjct: 191 TPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFC 241
>gb|AAF06346.1| SCUTL1 [Vitis vinifera]
Length = 307
Score = 67.8 bits (164), Expect = 2e-10
Identities = 46/149 (30%), Positives = 65/149 (42%), Gaps = 20/149 (13%)
Query: 90 CNSGEAQLGS*REHKLIRGRHGYNF---------NLPVTIYSVDLK---CKEIQCLVDMM 137
C+ G A+ + + G G +F NLP+ + + C CLVD+
Sbjct: 95 CDGGNAEPPATLAEFTLNGDQGLDFYDVSLVDGYNLPMLVVARGGHGGDCSATGCLVDLN 154
Query: 138 SFCPD*LAIYDSG-----GLKVGCKNACYTVGDQKLCCSAVYAFPKKCELNDYRQLVDDN 192
CP L + S G V CK+AC GD CCS Y+ P C+ + Y Q
Sbjct: 155 GACPKELRVVASATNGSRGASVACKSACEAFGDPMYCCSQAYSTPDTCQPSVYSQFFKHA 214
Query: 193 CPYFISNAFNQ--THFTCYGTASYVISFC 219
CP S A++ + FTC +A Y+I FC
Sbjct: 215 CPRSYSYAYDDKTSTFTC-ASADYIIIFC 242
>dbj|BAD45633.1| putative thaumatin-protein [Oryza sativa (japonica cultivar-group)]
gi|53793288|dbj|BAD54510.1| putative thaumatin-protein
[Oryza sativa (japonica cultivar-group)]
Length = 251
Score = 67.4 bits (163), Expect = 3e-10
Identities = 36/114 (31%), Positives = 57/114 (49%), Gaps = 5/114 (4%)
Query: 111 GYNFNLPVT-IYSVDLKCKEIQCLVDMMSFCPD*LAIYDSGGLK--VGCKNACYTVGDQK 167
GYN + +T + C C+ D+ CP LA+ GG VGC++AC G +
Sbjct: 134 GYNIPIAMTPSHGSGANCVPAGCISDLNRVCPAGLAVRGGGGDNRVVGCRSACAAYGAPQ 193
Query: 168 LCCSAVYAFPKKCELNDYRQLVDDNCPYFISNAFNQ--THFTCYGTASYVISFC 219
CC+ + P++C+ Y +L CP S A++ + TC ASY+++FC
Sbjct: 194 YCCTGQFGSPQQCKPTAYSRLFKTACPKAYSYAYDDPTSILTCSAGASYIVTFC 247
>emb|CAE59849.1| Hypothetical protein CBG03322 [Caenorhabditis briggsae]
Length = 233
Score = 67.4 bits (163), Expect = 3e-10
Identities = 39/110 (35%), Positives = 52/110 (46%), Gaps = 4/110 (3%)
Query: 114 FNLPVTIYSVDLK-CKEIQ-CLVDMMSFCPD*LAIYDSGGLKVGCKNACYTVGDQKLCCS 171
+NLPV I CK C+ D+ S CP L++ G V CK+ C + CC
Sbjct: 124 YNLPVLIDPHGGSGCKRAGGCVKDINSECPAALSVKGHNGNTVACKSGCLGYNTDQECCR 183
Query: 172 AVYAFPKKCELNDYRQLVDDNCPYFISNAFNQTH--FTCYGTASYVISFC 219
Y P KC + Q+ D CP S A++ + FTC TASY + FC
Sbjct: 184 GAYGTPDKCHRSATAQMFKDACPTAYSYAYDDSSSTFTCQATASYTVQFC 233
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.342 0.150 0.506
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 349,195,711
Number of Sequences: 2540612
Number of extensions: 13360078
Number of successful extensions: 31370
Number of sequences better than 10.0: 262
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 31087
Number of HSP's gapped (non-prelim): 268
length of query: 219
length of database: 863,360,394
effective HSP length: 123
effective length of query: 96
effective length of database: 550,865,118
effective search space: 52883051328
effective search space used: 52883051328
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0323a.14