BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0307.3
(443 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB92056.1| putative protein [Arabidopsis thaliana] gi|50198... 216 1e-54
gb|AAP37875.1| At5g59790 [Arabidopsis thaliana] gi|9757899|dbj|B... 182 1e-44
gb|AAL08561.1| auxin-regulated protein [Lycopersicon esculentum] 169 2e-40
gb|AAP04115.1| unknown protein [Arabidopsis thaliana] gi|2644987... 167 6e-40
gb|AAC98451.1| hypothetical protein [Arabidopsis thaliana] gi|25... 159 2e-37
dbj|BAC42479.1| unknown protein [Arabidopsis thaliana] gi|289509... 153 9e-36
emb|CAB90938.1| putative protein [Arabidopsis thaliana] gi|11357... 146 1e-33
ref|NP_974389.1| expressed protein [Arabidopsis thaliana] 144 5e-33
gb|AAT76997.1| expressed protein [Oryza sativa (japonica cultiva... 129 2e-28
ref|NP_915409.1| P0031D11.20 [Oryza sativa (japonica cultivar-gr... 129 2e-28
ref|XP_483788.1| putative auxin-regulated protein [Oryza sativa ... 107 1e-21
dbj|BAD46604.1| hypothetical protein [Oryza sativa (japonica cul... 94 9e-18
gb|AAV68800.1| hypothetical protein AT1G05577 [Arabidopsis thali... 92 2e-17
ref|NP_914381.1| P0459B04.11 [Oryza sativa (japonica cultivar-gr... 74 7e-12
dbj|BAD87843.1| unknown protein [Oryza sativa (japonica cultivar... 74 7e-12
ref|XP_636078.1| hypothetical protein DDB0188541 [Dictyostelium ... 52 5e-05
ref|XP_653447.1| Viral A-type inclusion protein repeat, putative... 51 6e-05
gb|AAM19760.1| glutamic acid-rich protein cNBL1700 [Trichinella ... 50 1e-04
gb|AAD55931.1| Msx2 interacting nuclear target protein [Mus musc... 50 1e-04
sp|Q62504|MINT_MOUSE Msx2-interacting protein (SPEN homolog) (SM... 50 1e-04
>emb|CAB92056.1| putative protein [Arabidopsis thaliana] gi|50198938|gb|AAT70472.1|
At5g10150 [Arabidopsis thaliana]
gi|15238068|ref|NP_196577.1| expressed protein
[Arabidopsis thaliana] gi|48525331|gb|AAT44967.1|
At5g10150 [Arabidopsis thaliana] gi|11358309|pir||T50019
hypothetical protein T31P16.140 - Arabidopsis thaliana
Length = 414
Score = 216 bits (549), Expect = 1e-54
Identities = 168/431 (38%), Positives = 232/431 (52%), Gaps = 74/431 (17%)
Query: 26 KVIKPA-RKVQVVYYLFRNGLLEHPHFMELTLLPNQPLRLKDVFDRLMVLRGSGMPLQYS 84
K KP R+VQVVYYL RNG LEHPHF+E+ NQPLRL+DV +RL +LRG M QY+
Sbjct: 37 KTKKPIFRRVQVVYYLTRNGHLEHPHFIEVISPVNQPLRLRDVMNRLTILRGKCMTSQYA 96
Query: 85 WSSKRNYKSGYVWFDLALKDVIYPSEGGEYVLKGSELVEGCSERFQQLNVSN--KNGIHE 142
WS KR+Y++G+VW DLA DVIYPS+ EYVLKGSE+ +++FQ+++V+ I E
Sbjct: 97 WSCKRSYRNGFVWNDLAENDVIYPSDCAEYVLKGSEI----TDKFQEVHVNRPLSGSIQE 152
Query: 143 PPETNYGYNAKSKVLSNRQQQKEAEEYEEYEEQEEEKEFT--------SSTTTPHSRCSR 194
P++ +K K + +AE Y EE+EE+ E+ +S+TTP SRCSR
Sbjct: 153 APKSRL-LRSKLKPQNRTASFDDAELYVGEEEEEEDGEYELYEEKTSYTSSTTPQSRCSR 211
Query: 195 GVSTEELGEDEDRHEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLN 254
GVSTE + E + N TKTE+ + + SS ++T P +K ++ E +
Sbjct: 212 GVSTETMESTEQK----PNLTKTEQDLQVRSDSS--DLTRSNPVVKPRRHEVSTRVEDGD 265
Query: 255 RRVVVPVQSKQRFGGELGTESATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSVG 314
PV+ R S LQ+I+CG ++ A + PR
Sbjct: 266 -----PVE----------------PGSGRGSMWLQMISCGHIATKYYAPSVMNPR----- 299
Query: 315 TTASKQRQSVDRRDQ--KAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYF 372
Q++ R+ K + ++E E + M SENPR GN Q AEEKEYF
Sbjct: 300 -----QKEENLRKGVLCKNIVKKTVVDDEREMIRFM----SENPR--FGNPQ-AEEKEYF 347
Query: 373 SGSLVEMESMK--ANHPVLKRSNSYNEERRSKLGVEEVKLKKEMEEENRERKGGVKEKCI 430
SGS+VE S + P L+RSNS+NEE RSK+ VE K E + +E + K KCI
Sbjct: 348 SGSIVESVSQERVTAEPSLRRSNSFNEE-RSKI-VEMAK-----ETKKKEERSMAKVKCI 400
Query: 431 P---IKKSSKE 438
P + SSK+
Sbjct: 401 PRTCLMSSSKQ 411
>gb|AAP37875.1| At5g59790 [Arabidopsis thaliana] gi|9757899|dbj|BAB08346.1| unnamed
protein product [Arabidopsis thaliana]
gi|20260480|gb|AAM13138.1| unknown protein [Arabidopsis
thaliana] gi|15238524|ref|NP_200787.1| expressed protein
[Arabidopsis thaliana]
Length = 423
Score = 182 bits (463), Expect = 1e-44
Identities = 158/457 (34%), Positives = 224/457 (48%), Gaps = 82/457 (17%)
Query: 2 DQHQVRPHRCSSR-DTSPDRAKICRKV-IKPA--RKVQVVYYLFRNGLLEHPHFMELTLL 57
D + + P R + DTSPDR +I + +KP RKV VVYYL RNG L+HPHF+E+TL
Sbjct: 11 DNNYLVPRRSKDQQDTSPDRNRIWSEPRLKPVVNRKVPVVYYLCRNGQLDHPHFIEVTLS 70
Query: 58 PNQPLRLKDVFDRLMVLRGSGMPLQYSWSSKRNYKSGYVWFDLALKDVIYPSEGGEYVLK 117
+ L LKDV +RL LRG GM YSWSSKR+YK+G+VW DL+ D I+P +G EYVLK
Sbjct: 71 SHDGLYLKDVINRLNDLRGKGMASLYSWSSKRSYKNGFVWHDLSEDDFIFPVQGQEYVLK 130
Query: 118 GSELVEGCSERFQQLNVSNKNGIHEP----------PETNYGYNAKSKVLSNRQQQK--- 164
GSE+++ C +SN + E P+ N G + + V++ R+ Q
Sbjct: 131 GSEVLDSCL-------ISNPRSLLETSSFRDPRSLNPDKNSGDDIPA-VINRRRNQSWSS 182
Query: 165 -EAEEYEEYEEQEEEKEFT------SSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKT 217
+ EY+ Y+ E E T +ST T R R + EE+ +E + A N T
Sbjct: 183 IDLSEYKVYKATESSAESTQRLAADASTQTDDRRRRRRPAKEEI--EEVKSPASYENQST 240
Query: 218 EKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGGELGTESAT 277
E SR ++ PPP + +L + R ++ P +S ES +
Sbjct: 241 E--------LSRDEIS--PPPSDSSPETLENLIKADGRLILRPSESST---DHRTVESLS 287
Query: 278 SAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSVGTTASK-QRQSVDRRDQKAFMMSC 336
S + L+QLI+CG+ FK G K Q +++ R
Sbjct: 288 SGRMRASAVLMQLISCGTM--SFK----------ECGPVLLKDQGLALNGRSGCTITRGA 335
Query: 337 EEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANHPVLKRSNSYN 396
E+ EE RV + + G +Q E+KEYFSGSL+ E+ K P LKRS+SYN
Sbjct: 336 EDNGEE--------RVDKELK-SFGRVQ-LEDKEYFSGSLI--ETKKELVPALKRSSSYN 383
Query: 397 EERRSKLGVEEVKLKKEMEEENRERKGGVKEKCIPIK 433
+R S++G K ++E V+ KCIP K
Sbjct: 384 ADRCSRMGPTTEKDEEE----------AVRAKCIPRK 410
>gb|AAL08561.1| auxin-regulated protein [Lycopersicon esculentum]
Length = 433
Score = 169 bits (427), Expect = 2e-40
Identities = 137/433 (31%), Positives = 207/433 (47%), Gaps = 52/433 (12%)
Query: 14 RDTSPDRAKICRKVIK-PARKVQVVYYLFRNGLLEHPHFMELTLLPNQPLRLKDVFDRLM 72
R+TSP+R K+ + KV VVYYL RNG LEHPHFME+ L L L+DV +RL
Sbjct: 16 RETSPERTKVWTEPPNHKLSKVPVVYYLSRNGQLEHPHFMEVPLSSRDGLYLRDVINRLN 75
Query: 73 VLRGSGMPLQYSWSSKRNYKSGYVWFDLALKDVIYPSEGGEYVLKGSELVEGCSERFQQL 132
LRG GM YSWS+KR+Y++G+VW DL D IYP+ G EYVLKGSEL++ Q
Sbjct: 76 CLRGKGMASMYSWSAKRSYRNGFVWHDLTENDFIYPAHGQEYVLKGSELLDSALPS-QPD 134
Query: 133 NVSNKNGIHEPPETNYGYNAKS--KVLSNRQQQKEAEEYEEYEEQEEEKE--------FT 182
++ N + PE + V R Q + ++ EY + E
Sbjct: 135 EIACSNSRNTVPEKQKLSEDREFPAVARRRNQSWSSSDFHEYLVYKAESPGEILGRIGAD 194
Query: 183 SSTTTPHSRCSR-GVSTEELGEDEDRHEALQNNTK-TEKVVVTNNVSSRGNVTNVPPPMK 240
+ST T R R G+ E E+ + ++++ K ++V + N S+ N + PP+
Sbjct: 195 ASTQTEDRRRRRGGMRIVEEEEELSENRIIESDCKEPDEVEHSPNQSTELNRGEISPPLS 254
Query: 241 NHSAAAASLAEKLNRRVVVPVQSKQRFGGELGTESATSAAPSRYSALLQLIACGS----- 295
+ S+ K + ++++ + + +S S L+QL+ CGS
Sbjct: 255 DSSSETLETLMKADGKLIL---RPDTISEDPTANTHSSGKSKAASVLMQLLYCGSMSFKQ 311
Query: 296 SGPEFKARTQQEPRVSSVGTTASKQRQSVDRRDQKAFMMSCEEEEEEEAVAMMMNRVSEN 355
GP + +E S + + K R S R C + ++ + ++
Sbjct: 312 CGPGY----GKENGFSLI--SQYKNRLSHGR---------CTNQAVKDVESPIVEYHGSE 356
Query: 356 PRLMLGNLQNAEEKEYFSGSLVEMESMKANHPVLKRSNSYNEERRSKLGVEEVK------ 409
R+ L E+KEYFSGSL+EM+ K P LKRS+SYN ER +KL + E +
Sbjct: 357 ERIKL------EDKEYFSGSLIEMKK-KEKFPALKRSSSYNVERSTKLELTEKQEEGKTK 409
Query: 410 --LKKEMEEENRE 420
L+K+ + RE
Sbjct: 410 CYLRKQKNQSTRE 422
>gb|AAP04115.1| unknown protein [Arabidopsis thaliana] gi|26449877|dbj|BAC42061.1|
unknown protein [Arabidopsis thaliana]
gi|30683784|ref|NP_180382.2| expressed protein
[Arabidopsis thaliana]
Length = 540
Score = 167 bits (423), Expect = 6e-40
Identities = 150/455 (32%), Positives = 219/455 (47%), Gaps = 82/455 (18%)
Query: 13 SRDTSPDRAKICR----KVIKPARKVQVVYYLFRNGLLEHPHFMELTLLPNQPLRLKDVF 68
SR+ SP+RAK+ K + +KVQ+VYYL +N LEHPHFME+ + L L+DV
Sbjct: 9 SREVSPERAKVWTEKSPKYHQKIKKVQIVYYLSKNRQLEHPHFMEVLISSPNGLYLRDVI 68
Query: 69 DRLMVLRGSGMPLQYSWSSKRNYKSGYVWFDLALKDVIYPSEGGEYVLKGSELV-EGCSE 127
+RL VLRG GM YSWSSKR+Y++G+VW DL+ D+I P+ G EYVLKGSEL E S+
Sbjct: 69 ERLNVLRGRGMASMYSWSSKRSYRNGFVWHDLSEDDLILPANGNEYVLKGSELFDESNSD 128
Query: 128 RFQQL-NVSNKNG---IHEPPETNYGYNAKSKVLSNRQQQKEAEEYEEYE-EQEEEKEFT 182
F + N++ +N + EPP + ++ S N + +E+ E + +
Sbjct: 129 HFSPIVNLATQNMKQIVVEPPSSRSMDDSSSSSSMNNGKGTNKHSHEDDELSPPALRSVS 188
Query: 183 SSTTTPHSRCSRGVSTEELGE------------DEDRHEALQNNTKTEKVVVTNNVSSRG 230
SS +P SR ++ S+ L E E + +KT + VS+
Sbjct: 189 SSGVSPDSRDAKNSSSWCLAEYKVYKSEGLADASTQTDETVSGRSKTPIETFSRGVSTDE 248
Query: 231 NVTNVPPPMKNHSAAAASLAEK------LNRRVVVP--VQSKQRFGGELGT-ESATSAAP 281
+V++ P +N+ + AS A K ++R V P S GG+ T ES A
Sbjct: 249 DVSSEPETSENNLVSEASCAGKERESAEISRNSVSPPFSNSASSLGGKTDTLESLIRADV 308
Query: 282 SRYSA----------------------LLQLIACGSSGPEFKARTQQEPRVSSVGTTASK 319
S+ ++ L+QLI+CGS + ++ V T K
Sbjct: 309 SKMNSFRILEQEDVRMPAIPRLRASNMLMQLISCGSI-------SVKDNNFGLVPTYKPK 361
Query: 320 QRQSVDRRD--QKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLV 377
S +FMM ++R+SE P LM + EEKEYFSGSLV
Sbjct: 362 FGHSKFPSPFFSSSFMMG------------DLDRLSETPSLMGLRM---EEKEYFSGSLV 406
Query: 378 EMESMKA----NHPVLKRSNSYNEERRS-KLGVEE 407
E + K ++ LKRS+SYN +R S ++GV E
Sbjct: 407 ETKLQKKDAADSNASLKRSSSYNGDRASNQMGVAE 441
>gb|AAC98451.1| hypothetical protein [Arabidopsis thaliana] gi|25407956|pir||D84681
hypothetical protein At2g28150 [imported] - Arabidopsis
thaliana
Length = 541
Score = 159 bits (402), Expect = 2e-37
Identities = 151/474 (31%), Positives = 220/474 (45%), Gaps = 101/474 (21%)
Query: 13 SRDTSPDRAKICR----KVIKPARKVQVVYYLFRNGLLEHPHFME--------LTLLPNQ 60
SR+ SP+RAK+ K + +KVQ+VYYL +N LEHPHFME L L N
Sbjct: 9 SREVSPERAKVWTEKSPKYHQKIKKVQIVYYLSKNRQLEHPHFMEVLISSPNGLYLRGNV 68
Query: 61 PLRLKDVFDRLMVLRGSGMPLQYSWSSKRNYKSGYVWFDLALKDVIYPSEGGEYVLKGSE 120
+ KDV +RL VLRG GM YSWSSKR+Y++G+VW DL+ D+I P+ G EYVLKGSE
Sbjct: 69 IIYFKDVIERLNVLRGRGMASMYSWSSKRSYRNGFVWHDLSEDDLILPANGNEYVLKGSE 128
Query: 121 LVEG------------CSERFQQL-NVSNKNG---IHEPPETNYGYNAKSKVLSNRQQQK 164
L + C++ F + N++ +N + EPP + ++ S N +
Sbjct: 129 LFDESNSEALRKPMLLCTDHFSPIVNLATQNMKQIVVEPPSSRSMDDSSSSSSMNNGKGT 188
Query: 165 EAEEYEEYE-EQEEEKEFTSSTTTPHSRCSRGVSTEELGE------------DEDRHEAL 211
+E+ E + +SS +P SR ++ S+ L E E +
Sbjct: 189 NKHSHEDDELSPPALRSVSSSGVSPDSRDAKNSSSWCLAEYKVYKSEGLADASTQTDETV 248
Query: 212 QNNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEK------LNRRVVVP--VQS 263
+KT + VS+ +V++ P +N+ + AS A K ++R V P S
Sbjct: 249 SGRSKTPIETFSRGVSTDEDVSSEPETSENNLVSEASCAGKERESAEISRNSVSPPFSNS 308
Query: 264 KQRFGGELGT-ESATSAAPSRYSA----------------------LLQLIACGSSGPEF 300
GG+ T ES A S+ ++ L+QLI+CGS
Sbjct: 309 ASSLGGKTDTLESLIRADVSKMNSFRILEQEDVRMPAIPRLRASNMLMQLISCGSI---- 364
Query: 301 KARTQQEPRVSSVGTTASKQRQSVDRRD--QKAFMMSCEEEEEEEAVAMMMNRVSENPRL 358
+ ++ V T K S +FMM ++R+SE P L
Sbjct: 365 ---SVKDNNFGLVPTYKPKFGHSKFPSPFFSSSFMMG------------DLDRLSETPSL 409
Query: 359 MLGNLQNAEEKEYFSGSLVEMESMKA----NHPVLKRSNSYNEERRS-KLGVEE 407
M + EEKEYFSGSLVE + K ++ LKRS+SYN +R S ++GV E
Sbjct: 410 MGLRM---EEKEYFSGSLVETKLQKKDAADSNASLKRSSSYNGDRASNQMGVAE 460
>dbj|BAC42479.1| unknown protein [Arabidopsis thaliana] gi|28950915|gb|AAO63381.1|
At3g46110 [Arabidopsis thaliana]
gi|30692681|ref|NP_190197.2| expressed protein
[Arabidopsis thaliana]
Length = 343
Score = 153 bits (387), Expect = 9e-36
Identities = 122/392 (31%), Positives = 186/392 (47%), Gaps = 76/392 (19%)
Query: 29 KPARK--VQVVYYLFRNGLLEHPHFMELTLLPNQPLRLKDVFDRLMVLRGSGMPLQYSWS 86
KP+R+ V VVYYL RNG L+HPHF+E+ L + L LKDV +RL LRG+GM YSWS
Sbjct: 13 KPSRERIVPVVYYLSRNGRLDHPHFIEVPLSSHNGLYLKDVINRLNDLRGNGMACLYSWS 72
Query: 87 SKRNYKSGYVWFDLALKDVIYPSEGGEYVLKGSELVEGCSERFQQLNVSNKNGIHEPPET 146
SKR YK+G+VW+DL+ +D I+P G EYVLKGS++ L++ N +G
Sbjct: 73 SKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQI----------LDLDNNSG------- 115
Query: 147 NYGYNAKSKVLSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTEELGEDED 206
N + Q + Y+ Y+ E E T R +S + + +D
Sbjct: 116 ----NFSAVTHRRNQSWSSVDHYKVYKASELNAEAT-----------RKLSMDASTQTDD 160
Query: 207 RHEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQR 266
R + V N V+ PP + S + + R+++ +Q Q
Sbjct: 161 RRR------RKSPVDEVNEVTELSREEITSPPQSDSSPETLESLMRADGRLIL-LQEDQE 213
Query: 267 FGGELGTESATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSVGTTASKQRQSVDR 326
+ PS + L+QLI+CG+ FK + P + + T ++ R + +
Sbjct: 214 L-----NRTVEKMRPS--AVLMQLISCGAM--SFK---KCGPTLMNGNTRSTAVRGTGNY 261
Query: 327 RDQKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANH 386
R ++A E+E ++ + EEKEYFSGSL++ S K
Sbjct: 262 RLERA-------EKELKSFGRV----------------KLEEKEYFSGSLIDESSKKELV 298
Query: 387 PVLKRSNSYNEERRSKLGVEEVKLKKEMEEEN 418
P LKRS+SYN +R S++G+ + K +E+ N
Sbjct: 299 PALKRSSSYNIDRSSRMGLTKEKEGEELARAN 330
>emb|CAB90938.1| putative protein [Arabidopsis thaliana] gi|11357390|pir||T49252
hypothetical protein F12M12.80 - Arabidopsis thaliana
Length = 340
Score = 146 bits (368), Expect = 1e-33
Identities = 121/392 (30%), Positives = 184/392 (46%), Gaps = 79/392 (20%)
Query: 29 KPARK--VQVVYYLFRNGLLEHPHFMELTLLPNQPLRLKDVFDRLMVLRGSGMPLQYSWS 86
KP+R+ V VVYYL RNG L+HPHF+E+ L + L LKDV +RL LRG+GM YSWS
Sbjct: 13 KPSRERIVPVVYYLSRNGRLDHPHFIEVPLSSHNGLYLKDVINRLNDLRGNGMACLYSWS 72
Query: 87 SKRNYKSGYVWFDLALKDVIYPSEGGEYVLKGSELVEGCSERFQQLNVSNKNGIHEPPET 146
SKR YK+G+VW+DL+ +D I+P G EYVLKGS++ L++ N +G
Sbjct: 73 SKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQI----------LDLDNNSG------- 115
Query: 147 NYGYNAKSKVLSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTEELGEDED 206
N + Q + Y+ Y+ E E T R +S + + +D
Sbjct: 116 ----NFSAVTHRRNQSWSSVDHYKVYKASELNAEAT-----------RKLSMDASTQTDD 160
Query: 207 RHEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQR 266
R + V N V+ PP + S + + R+++ +Q Q
Sbjct: 161 RRR------RKSPVDEVNEVTELSREEITSPPQSDSSPETLESLMRADGRLIL-LQEDQE 213
Query: 267 FGGELGTESATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSVGTTASKQRQSVDR 326
+ PS + L+QLI+CG+ FK + P + + T ++ R + +
Sbjct: 214 L-----NRTVEKMRPS--AVLMQLISCGAM--SFK---KCGPTLMNGNTRSTAVRGTGNY 261
Query: 327 RDQKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANH 386
R ++A E+E ++ + EEKEYFSGSL++ S K
Sbjct: 262 RLERA-------EKELKSFGRV----------------KLEEKEYFSGSLIDESSKKELV 298
Query: 387 PVLKRSNSYNEERRSKLGVEEVKLKKEMEEEN 418
P LKRS+SYN +R +G+ + K +E+ N
Sbjct: 299 PALKRSSSYNIDR---MGLTKEKEGEELARAN 327
>ref|NP_974389.1| expressed protein [Arabidopsis thaliana]
Length = 311
Score = 144 bits (363), Expect = 5e-33
Identities = 117/373 (31%), Positives = 175/373 (46%), Gaps = 76/373 (20%)
Query: 29 KPARK--VQVVYYLFRNGLLEHPHFMELTLLPNQPLRLKDVFDRLMVLRGSGMPLQYSWS 86
KP+R+ V VVYYL RNG L+HPHF+E+ L + L LKDV +RL LRG+GM YSWS
Sbjct: 13 KPSRERIVPVVYYLSRNGRLDHPHFIEVPLSSHNGLYLKDVINRLNDLRGNGMACLYSWS 72
Query: 87 SKRNYKSGYVWFDLALKDVIYPSEGGEYVLKGSELVEGCSERFQQLNVSNKNGIHEPPET 146
SKR YK+G+VW+DL+ +D I+P G EYVLKGS++ L++ N +G
Sbjct: 73 SKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQI----------LDLDNNSG------- 115
Query: 147 NYGYNAKSKVLSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTEELGEDED 206
N + Q + Y+ Y+ E E T R +S + + +D
Sbjct: 116 ----NFSAVTHRRNQSWSSVDHYKVYKASELNAEAT-----------RKLSMDASTQTDD 160
Query: 207 RHEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQR 266
R + V N V+ PP + S + + R+++ +Q Q
Sbjct: 161 RRR------RKSPVDEVNEVTELSREEITSPPQSDSSPETLESLMRADGRLIL-LQEDQE 213
Query: 267 FGGELGTESATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSVGTTASKQRQSVDR 326
+ PS + L+QLI+CG+ FK + P + + T ++ R + +
Sbjct: 214 L-----NRTVEKMRPS--AVLMQLISCGAM--SFK---KCGPTLMNGNTRSTAVRGTGNY 261
Query: 327 RDQKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANH 386
R ++A E+E ++ + EEKEYFSGSL++ S K
Sbjct: 262 RLERA-------EKELKSFGRV----------------KLEEKEYFSGSLIDESSKKELV 298
Query: 387 PVLKRSNSYNEER 399
P LKRS+SYN +R
Sbjct: 299 PALKRSSSYNIDR 311
>gb|AAT76997.1| expressed protein [Oryza sativa (japonica cultivar-group)]
Length = 521
Score = 129 bits (324), Expect = 2e-28
Identities = 117/436 (26%), Positives = 197/436 (44%), Gaps = 60/436 (13%)
Query: 14 RDTSPDRAKICRKVIKPARKVQVVYYLFRNGLLEHPHFMELTLLPNQPLRLKDVFDRLMV 73
R SP+R + ARKV VVYYL R+ LEHPHF+E+ + + L L+DV L +
Sbjct: 7 RPRSPERQR------PAARKVPVVYYLTRSRHLEHPHFVEVPVSSPEGLYLRDVISHLNM 60
Query: 74 LRGSGMPLQYSWSSKRNYKSGYVWFDLALKDVIYPSEGGEYVLKGSELVEGCS------- 126
+RG GM YSWS KR+YK+G+VW DL D+++P+ GEYVLKGSEL++ S
Sbjct: 61 VRGKGMAAMYSWSCKRSYKNGFVWHDLGEDDLVHPATDGEYVLKGSELLDQSSSGQFYQG 120
Query: 127 ---ERFQQLNVSNKNGIHEPPETNYGYNAKSKVLSNRQQQK--EAEEYEEYEEQEEEKEF 181
+ QQ + + P E +Y + S ++ + ++ EE + + +
Sbjct: 121 TNGNQKQQSRLKEGARLPLPREASYSSSPPSVIVREAKPRRSPSVPSLEEDDSPVQCRVT 180
Query: 182 TSSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKN 241
+ +P S R + + + + T+++ R +V VP +
Sbjct: 181 SLENMSPESEPQRTLLSRAGSASPAEFRVYKPTGCVDAATQTDDLGRR-SVRKVP---EM 236
Query: 242 HSAAAASLAEKLNRRVVVPVQSKQRFGGEL-----------GTESATSAAPSRYSALLQL 290
H + ++ + + R + QS+ R EL T + ++ + +L L
Sbjct: 237 HKKSLSTDHDSVVREITEYRQSQPRRSAELQGIAREAMSQCHTPLSIPSSRGKSESLESL 296
Query: 291 IACGSSG-PEFKARTQQE---------------PRVSSVGTTASKQRQSVDR-RDQKAFM 333
I ++ F+ + + ++ + G+ + K +++ K
Sbjct: 297 IRADNNALNSFRILEEDDIIMPTCPKLRPANVLMQLITCGSLSVKDHENIRLVEGYKPRF 356
Query: 334 MSCEEEEEEEAVAMMMNR---VSENPRLMLGNLQNAEEKEYFSGSLVEMESMK----ANH 386
+ + + MMM +SENPRLM L E+KEYFSGSL+E + + +
Sbjct: 357 PNMKFPSPLISRTMMMGELDYLSENPRLMGMRL---EDKEYFSGSLIETKMQRDVPADRY 413
Query: 387 PVLKRSNSYNEERRSK 402
LKRS+SYN ER ++
Sbjct: 414 SALKRSSSYNAERSNE 429
>ref|NP_915409.1| P0031D11.20 [Oryza sativa (japonica cultivar-group)]
gi|21104614|dbj|BAB93206.1| putative auxin-regulated
protein [Oryza sativa (japonica cultivar-group)]
gi|15623827|dbj|BAB67886.1| putative auxin-regulated
protein [Oryza sativa (japonica cultivar-group)]
Length = 411
Score = 129 bits (323), Expect = 2e-28
Identities = 124/443 (27%), Positives = 171/443 (37%), Gaps = 129/443 (29%)
Query: 30 PARKVQVVYYLFRNGLLEHPHFMELTLLPNQPLRLKDVFDRLMVLRGSGMPLQYSWSSKR 89
PAR VVYYL RNG LEHPHFME+ + L L+DV DRL LRG GM YSW+SKR
Sbjct: 43 PARAA-VVYYLSRNGHLEHPHFMEVAVASPDGLYLRDVIDRLDALRGKGMARMYSWASKR 101
Query: 90 NYKSGYVWFDLALKDVIYPSEGGEYVLKGSE-------------LVEGCSERFQQLNVSN 136
+Y++G+VW DLA D IYP G EYVLKG+E CS Q+ S+
Sbjct: 102 SYRNGFVWHDLADDDYIYPVAGREYVLKGTERLHPIQLPLLDAAAASSCSSGSQETATSS 161
Query: 137 KNGIHEPPETNYGYNAKSKVLSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPHS--RCSR 194
PP G + E EY Y+ ++ + T R SR
Sbjct: 162 ------PPGWENGTGEARQKKGAGINTSELCEYRVYKAEDPAAAAADAATQTEDGYRSSR 215
Query: 195 GVSTEELGEDEDRHEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLN 254
G + + E + T PP + S K +
Sbjct: 216 GRHAQRAAAAAAQEELSREETS--------------------PPTASTSPETLEALIKAD 255
Query: 255 RRVVVPVQSKQRFGGELGTESATSAAPSRYSALLQLIACGS--------------SGPEF 300
RV+ V R T A+ S L+QLI+CGS + +
Sbjct: 256 GRVMAAVTGGGR----------TRAS----SVLMQLISCGSVSVKSTLASPVMARTAAHY 301
Query: 301 KARTQQEPRVSSVGTTASKQRQSVDRRDQKAFMMSCEEEEEEEAVAMMMNRVSENPRLML 360
+ R + P ++S T RQ +
Sbjct: 302 RPRPPRPPTLASTTTEIPNYRQKI------------------------------------ 325
Query: 361 GNLQNAEEKEYFSGSLVEME-----SMKANHPVLKRSNSYNEERRSKLGVEEVKLKKEME 415
E+KEYFSGSLVE + + VL+RS+SYN +R V++V+ E
Sbjct: 326 -----VEDKEYFSGSLVETKRSSPADTSQDIAVLRRSSSYNADR-----VQKVEPSTEAV 375
Query: 416 EENRERKGGVKEKCIPIKKSSKE 438
+ + ++CIP + K+
Sbjct: 376 D--------MHDRCIPRRPRGKK 390
>ref|XP_483788.1| putative auxin-regulated protein [Oryza sativa (japonica
cultivar-group)] gi|45736173|dbj|BAD13219.1| putative
auxin-regulated protein [Oryza sativa (japonica
cultivar-group)] gi|42408422|dbj|BAD09604.1| putative
auxin-regulated protein [Oryza sativa (japonica
cultivar-group)]
Length = 502
Score = 107 bits (266), Expect = 1e-21
Identities = 122/485 (25%), Positives = 178/485 (36%), Gaps = 147/485 (30%)
Query: 31 ARKVQVVYYLFRNGLLEHPHFMELTLLPNQPLRLK------------------------- 65
+++V VVYYL RN LEHPHF+E+ L L L+
Sbjct: 45 SKRVAVVYYLCRNRHLEHPHFIEVPLASPDGLYLRGLYPSLFLVQASVFFFFPFSIPTND 104
Query: 66 ------DVFDRLMVLRGSGMPLQYSWSSKRNYKSGYVWFDLALKDVIYPSEGGEYVLKGS 119
DV +RL VLRG GM YSWS KR+YK+G+VW DL+ D++ P++G EY+LKGS
Sbjct: 105 AGGVDADVINRLNVLRGKGMAAMYSWSCKRSYKNGFVWHDLSEDDLVLPAQGNEYILKGS 164
Query: 120 ELVEGCSERFQQLNVSN------KNGIHEPPETNYGYNAKSKVLSNRQQQKEAEEYEEYE 173
EL++ QQ V K+ E P + S S KEA
Sbjct: 165 ELLDRSPPDRQQNGVGEPKVETLKHPPEESPHSRGSQEGCSSSSSPSAVTKEASPPPPTP 224
Query: 174 EQEEEKE------FTSSTT--------TPHSRCSRGVSTEELGE---------------- 203
+ +++ + +S++T TP S S +S E G
Sbjct: 225 QPQQQAQSATLLPSSSASTNREDDQCRTPRSGSSGNMSPEPAGRVAPPLSEASSPGPLEY 284
Query: 204 ---------------DEDRHEALQNNTKTEKVVVTNNVSSR----------------GNV 232
D+ +A + N++ V N+ S V
Sbjct: 285 RVCKPIGAQDASTQTDDSERDAPERNSRMAGVCTENSTSDSEIQECHPRSTQPSPKGPGV 344
Query: 233 TNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGG----ELGTESATSAAPSRYSALL 288
PP+ + A+ E L + + F L P+ + L+
Sbjct: 345 VRESPPVCSSDASPGGRVETLESLIRAEASRRSSFRALEEEHLFAPMGVKFKPA--NLLM 402
Query: 289 QLIACGSSG----------PEFKARTQQEPRVSSVGTTASKQRQSVDRRDQKAFMMSCEE 338
QLI CGS P ++ R Q S + +T R
Sbjct: 403 QLITCGSISVKDHRSFGLIPTYRPRFTQVEFPSPMFSTPLALRH---------------- 446
Query: 339 EEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEM----ESMKANHPVLKRSNS 394
++ + N R + + + EYFSGSLVE ES K P LKRS+S
Sbjct: 447 ----------LDNIPCNARTIGMRIPES---EYFSGSLVETKKQDESGKGGTPTLKRSSS 493
Query: 395 YNEER 399
+E+R
Sbjct: 494 CSEDR 498
>dbj|BAD46604.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 519
Score = 94.0 bits (232), Expect = 9e-18
Identities = 93/309 (30%), Positives = 133/309 (42%), Gaps = 37/309 (11%)
Query: 32 RKVQVVYYLFRN--GLLEHPHFMELTLLPNQP-----LRLKDVFDRLMVLRGSGMPLQYS 84
RKV VVYYL R+ G LEHPH ME+ + + LRL+DV RL LRG GM YS
Sbjct: 36 RKVAVVYYLCRSRQGGLEHPHLMEVEVGDGEEQVHVQLRLRDVTRRLDALRGKGMAAMYS 95
Query: 85 WSSKRNYKSGYVWFDLA-LKDVIYPSEGGEYVLKGSEL----VEGCSERFQQLNVSNKNG 139
WS KR+Y+ GYVW DL+ D++ P+ +YVLK S L + R L S +
Sbjct: 96 WSCKRSYRGGYVWHDLSHPDDLLLPTGPHDYVLKASLLHLHHLIDPPPRHHPLITSTSSS 155
Query: 140 IHEPPETNYGYNAKSKVLSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTE 199
H + A ++S+ A ++Q +S T PHS S S+
Sbjct: 156 AHHSLPPHAAAAAHVSLVSSSSTDANANSVVVGDDQCT----SSCRTQPHSSSSSSSSSS 211
Query: 200 ELGEDEDRHEALQNNTK---TEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEK---L 253
+ NN+K EK VV G + SAA + + +
Sbjct: 212 SSASSSGSSSSHNNNSKEKEDEKQVV-------GEARRPAAAVVVASAATQTDDDSSFTV 264
Query: 254 NRRVVVPVQSKQRFGGELGTESATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSV 313
+ P KQ G G+ S++S +L LI SG F++ + + S+
Sbjct: 265 TGSIAAPSAQKQGAAGGRGSSSSSS------RSLESLIMAEYSG--FRSMLEDDEEESAG 316
Query: 314 GTTASKQRQ 322
G S +R+
Sbjct: 317 GADNSSRRR 325
>gb|AAV68800.1| hypothetical protein AT1G05577 [Arabidopsis thaliana]
gi|60547531|gb|AAX23729.1| hypothetical protein
At1g05577 [Arabidopsis thaliana]
gi|22329353|ref|NP_683277.1| hypothetical protein
[Arabidopsis thaliana] gi|25372761|pir||F86189
hypothetical protein [imported] - Arabidopsis thaliana
gi|4836909|gb|AAD30611.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 372
Score = 92.4 bits (228), Expect = 2e-17
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 23/227 (10%)
Query: 32 RKVQVVYYLFRNGLLEHPHFMELTLLPNQPLRLKDVFDRLMVLRGSGMPLQYSWSSKRNY 91
R+V +VY+L R+G ++HPH + + L + L+DV L RG MP +SWS KR Y
Sbjct: 11 RRVNLVYFLSRSGHVDHPHLLRVHHLSRNGVFLRDVKKWLADARGDAMPDAFSWSCKRRY 70
Query: 92 KSGYVWFDLALKDVIYPSEGGEYVLKGSELVEGCSERFQQLNVSNKNGIHEPPETNYGYN 151
K+GYVW DL D+I P EYVLKGSE++ S + NV K + N G +
Sbjct: 71 KNGYVWQDLLDDDLITPISDNEYVLKGSEILLS-SPKEDYPNVEKKAWV----TRNGGID 125
Query: 152 AKSKV----LSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPH------SRCSRGVSTEEL 201
A+ K+ L++ + QKE+ + T +TT + + VS +
Sbjct: 126 AEEKLQKLKLTSEKIQKESPVFCSQRSTATTSTVTEESTTNEEGFVLKKQDPKTVSGQRD 185
Query: 202 GEDEDRHEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAAS 248
G E+ N+ ++ + V++ SS + N K++S+ AS
Sbjct: 186 GSTEN---GSGNDVESGRPSVSSTTSSSSYIKN-----KSYSSVRAS 224
>ref|NP_914381.1| P0459B04.11 [Oryza sativa (japonica cultivar-group)]
Length = 392
Score = 74.3 bits (181), Expect = 7e-12
Identities = 51/115 (44%), Positives = 67/115 (57%), Gaps = 13/115 (11%)
Query: 20 RAKICRKVIKPARKVQVVYYLFR-NGLLEHPHFMELTLL-------PNQPLRLKDVFDRL 71
R ++ +K +K V VVYYL R +G L+HPHF+ + + P L L+D RL
Sbjct: 4 RTELKKKQMKQV-VVGVVYYLCRQDGQLDHPHFVHVHVPSDSDSDHPRPRLHLRDFIARL 62
Query: 72 MVLRGSGMPLQYSWSSKRNYK--SGYVWFDLALKDVI-YPSEG-GEYVLKGSELV 122
LRG+ MP YSWS+K Y+ +GYVW DL D+I PS EYVLKGS L+
Sbjct: 63 SDLRGAAMPAAYSWSAKTTYRRNAGYVWQDLTADDLIPAPSTNHEEYVLKGSPLL 117
>dbj|BAD87843.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 320
Score = 74.3 bits (181), Expect = 7e-12
Identities = 51/115 (44%), Positives = 67/115 (57%), Gaps = 13/115 (11%)
Query: 20 RAKICRKVIKPARKVQVVYYLFR-NGLLEHPHFMELTLL-------PNQPLRLKDVFDRL 71
R ++ +K +K V VVYYL R +G L+HPHF+ + + P L L+D RL
Sbjct: 4 RTELKKKQMKQV-VVGVVYYLCRQDGQLDHPHFVHVHVPSDSDSDHPRPRLHLRDFIARL 62
Query: 72 MVLRGSGMPLQYSWSSKRNYK--SGYVWFDLALKDVI-YPSEG-GEYVLKGSELV 122
LRG+ MP YSWS+K Y+ +GYVW DL D+I PS EYVLKGS L+
Sbjct: 63 SDLRGAAMPAAYSWSAKTTYRRNAGYVWQDLTADDLIPAPSTNHEEYVLKGSPLL 117
>ref|XP_636078.1| hypothetical protein DDB0188541 [Dictyostelium discoideum]
gi|60464424|gb|EAL62571.1| hypothetical protein
DDB0188541 [Dictyostelium discoideum]
Length = 1419
Score = 51.6 bits (122), Expect = 5e-05
Identities = 61/285 (21%), Positives = 113/285 (39%), Gaps = 17/285 (5%)
Query: 160 RQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKTEK 219
+Q +K+ E EE E+E++K S+T P S+ S+ + E E+E + + + + K
Sbjct: 428 KQSKKKPSESEEESEKEQKKIVNKSSTKPISKQSKKKAVESESEEESEPGSEEESEEESK 487
Query: 220 VVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGGELGTESATSA 279
V N S++ P+ S A +E + ++ E T +
Sbjct: 488 KAV-NKASAK--------PISKQSKKKAVESEPESESESDEESEEEEESEEEETNKVVTK 538
Query: 280 APSR--YSALLQLIACGSSGPEFKARTQQEPRVSSVGTTASKQRQSVDRRDQKAFMMSCE 337
+ S+ + + I S + ++E S +QS + + F E
Sbjct: 539 STSKPLKQSKKKEIESESESKSEEEEEEEEEEKEEESKKKSSSKQSKKKVTKSKF--ESE 596
Query: 338 EEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANHPVLKRSNSYNE 397
E EEE+ N + + ++E S S E++ K+ ++ N E
Sbjct: 597 HESEEESKDSKKNVKKSASKQSKKKVTQESDEELKSESDEEIKKEKSKKVKKEKENKLKE 656
Query: 398 ERRSKLGVEEVKLKKEMEEENRERKGGVKEKCIPIKKSSKESSRR 442
+ + EE K K+E E+ RE+K KEK +K ++ +R
Sbjct: 657 KEKK----EEEKRKEEKEKLEREKKEKEKEKEKEKEKEKEKEKKR 697
Score = 50.4 bits (119), Expect = 1e-04
Identities = 67/295 (22%), Positives = 118/295 (39%), Gaps = 52/295 (17%)
Query: 153 KSKVLSNRQQQKEAEEYEEYEEQEEEKE----FTSSTTTPHSRC-SRGVSTEELGEDEDR 207
K V S + + E++E E EE+ EE+E T ST+ P + + + +E + E+
Sbjct: 504 KKAVESEPESESESDEESEEEEESEEEETNKVVTKSTSKPLKQSKKKEIESESESKSEEE 563
Query: 208 HEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRF 267
E + + E +++ S+ VT H + S K N + QSK++
Sbjct: 564 EEEEEEEKEEESKKKSSSKQSKKKVTK-SKFESEHESEEESKDSKKNVKKSASKQSKKKV 622
Query: 268 GGELGTESATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSVGTTASKQRQSVDRR 327
E S E K+ + +E K+ +S +
Sbjct: 623 TQE-------------------------SDEELKSESDEE----------IKKEKSKKVK 647
Query: 328 DQKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANHP 387
+K + +E++EEE R E +L + +EKE E E K
Sbjct: 648 KEKENKLKEKEKKEEE------KRKEEKEKLEREKKEKEKEKE--KEKEKEKEKEKKRIE 699
Query: 388 VLKRSNSYNEERRSKLGVEEVKLKKEMEEENRERKGGVKEKCIPIKKSSKESSRR 442
K+ NEE+ K ++ K +KE EE++R+ K +EK +K ++E+ R+
Sbjct: 700 KEKKKIRENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEK---ERKENEENERK 751
Score = 50.1 bits (118), Expect = 1e-04
Identities = 60/313 (19%), Positives = 118/313 (37%), Gaps = 27/313 (8%)
Query: 153 KSKVLSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRG-VSTEELGEDEDRHEAL 211
+S+ S + +E+EE EE EE+E K T ST+ P + + + +E + E+ E
Sbjct: 508 ESEPESESESDEESEEEEESEEEETNKVVTKSTSKPLKQSKKKEIESESESKSEEEEEEE 567
Query: 212 QNNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGGEL 271
+ + E +++ S+ VT + H + S K N + QSK++ E
Sbjct: 568 EEEKEEESKKKSSSKQSKKKVTKSKFESE-HESEEESKDSKKNVKKSASKQSKKKVTQES 626
Query: 272 GTESATSAAPSRYSALLQLIACGSSGP-EFKARTQQEPRVSSVGTTASKQRQSVDRRDQK 330
E + + + + + K + ++E R +R+ ++ +K
Sbjct: 627 DEELKSESDEEIKKEKSKKVKKEKENKLKEKEKKEEEKRKEE---KEKLEREKKEKEKEK 683
Query: 331 AFMMSCEEEEEEEAVAMMMNRVSENP---------------------RLMLGNLQNAEEK 369
E+E+E++ + ++ EN R + E K
Sbjct: 684 EKEKEKEKEKEKKRIEKEKKKIRENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERK 743
Query: 370 EYFSGSLVEMESMKANHPVLKRSNSYNEERRSKLGVEEVKLKKEMEEENRERKGGVKEKC 429
E E E K K + + + ++E + KK E+E ++RK +++
Sbjct: 744 ENEENERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKEEKKRKEKEEKDRKEKERKEN 803
Query: 430 IPIKKSSKESSRR 442
K+ KE R
Sbjct: 804 EEKKRKEKEEKER 816
Score = 43.9 bits (102), Expect = 0.010
Identities = 57/333 (17%), Positives = 133/333 (39%), Gaps = 29/333 (8%)
Query: 133 NVSNKNGIHEPPETNYGYN---------------AKSKVLSNRQQQKEAEEYEEYEEQEE 177
N+ N+N ++E + N N K K+ +N ++KE + ++ +E+E+
Sbjct: 295 NLINENRVNETDDDNNNNNNHNNNANNEFKSITDKKQKLSNNIIKKKEESDDDDEKEKEK 354
Query: 178 EKEFTSSTTTPHSRCSRGVSTEELGEDEDRHEALQN-NTKTEKVVVTNNVSSRGNVTNVP 236
EKE + + ++ + + + + Q+ ++K+ T S + + P
Sbjct: 355 EKEKNKKLKNSNINKNNSKESQSIKKSPTKSQPKQSKKNASDKITKTIEESQSESESEEP 414
Query: 237 PPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGGELGTESATSAAPSRYSALLQLIACGSS 296
+ S L + + +S++ + S + ++ + S
Sbjct: 415 IEISKKSTDKPILKQSKKKPSESEEESEKEQKKIVNKSSTKPISKQSKKKAVESESEEES 474
Query: 297 GPEFKARTQQEP-----RVSSVGTTASKQRQSVDRRDQKAFMMSCEEEEEEEAVAMMMNR 351
P + +++E + S+ + ++++V+ + E EEEEE+ N+
Sbjct: 475 EPGSEEESEEESKKAVNKASAKPISKQSKKKAVESEPESESESDEESEEEEESEEEETNK 534
Query: 352 V--SENPRLMLGNLQNAEEKEYFSGSLVEMESMKANHPVLKRSNSYNEERRSKLGVEEVK 409
V + + + + E E S S E E + + S +++ + K+ + +
Sbjct: 535 VVTKSTSKPLKQSKKKEIESESESKSEEEEEEEEEEKEEESKKKSSSKQSKKKVTKSKFE 594
Query: 410 LKKEMEEENRERKGGVKEKCIPIKKSSKESSRR 442
+ E EEE+++ K VK K +SK+S ++
Sbjct: 595 SEHESEEESKDSKKNVK------KSASKQSKKK 621
>ref|XP_653447.1| Viral A-type inclusion protein repeat, putative [Entamoeba
histolytica HM-1:IMSS] gi|56470397|gb|EAL48061.1| Viral
A-type inclusion protein repeat, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1813
Score = 51.2 bits (121), Expect = 6e-05
Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 27/294 (9%)
Query: 157 LSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVS--TEELGEDEDRHEALQNN 214
LS +Q+KE +E E E+ ++ +E S T S S G+S EEL + + E + N
Sbjct: 319 LSQLKQEKEEKENELKEQVKKMEEEKSKLITELSNGSDGISKLNEELTQTKQEKEEINNE 378
Query: 215 TKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGGELGTE 274
+ K + + N +K ++L + + + + E+ T
Sbjct: 379 LNSIKEEKKRIEEEKNQIINENKEIKEEKEKIEEEKKELLKEIEKEKEGNNQLQNEINT- 437
Query: 275 SATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSVG-------TTASKQRQSVDRR 327
Q I C ++ K + +QE + T +++ + VD +
Sbjct: 438 --IQTRMKEIEEKNQEIICDNNKEIAKFKEEQENLQKELNQIKEEKQKTENEKNELVDVK 495
Query: 328 DQKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQN--AEEKEYFSGSLVEMESMKAN 385
QK ++ +EE+E+ N + + N N EEK + E ES+K
Sbjct: 496 TQKENELNKLKEEKEQIF---------NEKTTIENSLNQIVEEKNKLT---EEKESIKQE 543
Query: 386 HPVLKRSNSYNEERRSKLGVEEVKLKKEMEEENRERKGGVKE-KCIPIKKSSKE 438
+K NS E +K+ E+ +L+ + + +E++ KE I I+KS KE
Sbjct: 544 LDSIKADNSTKELEINKINEEKNQLQNDYDTVQQEKENIQKELNQIKIEKSQKE 597
Score = 45.1 bits (105), Expect = 0.005
Identities = 69/318 (21%), Positives = 134/318 (41%), Gaps = 53/318 (16%)
Query: 141 HEPPETNYGYNAKSKVLSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVST-- 198
H + ++ K V +N +Q++ + E+ ++ K F S + S+ + VST
Sbjct: 44 HRERKASFLTRPKKGVNTNDSEQQDPPTQQPVEKVQQRKGFLSRRSETQSQTNELVSTPP 103
Query: 199 EELGEDEDRHEALQNNTKTEK------------VVVTNNVSSRGNVTNVPPPMKNHSA-- 244
E DE ++E Q++++T + + + S R + N HSA
Sbjct: 104 HEKSGDEAKNEQKQSSSQTSESTEKETHKKRLSFLGRKSFSKRNSTENTGHSSSEHSATS 163
Query: 245 --AAASLAEKLNRRVVVPVQSK-QRFGGELGTESATSAAPSRYSALLQLIACGSSGPEFK 301
A+ + AE++NR V ++ + +R E E ++ S L + K
Sbjct: 164 SLASETTAEEVNRSVNAQIEEENKRLQNE--NEELKKKCDAQDSLL-----------KTK 210
Query: 302 ARTQQEPRVSSVGTTASKQRQSVDRRDQKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLG 361
+++ E + V ++++ +D+ + MS + EE + + S N L
Sbjct: 211 MKSEMEAK-KKVEILENEKKDLIDKMANENDGMS---KLNEELTQIKNEKESINNEL--- 263
Query: 362 NLQNAEEKEYFSGSLVEMES---MKANH---------PVLKRSNSYNEERRSKLGVEEVK 409
+Q +EKE + L ++++ K N V+++ N+ EE K+ E +
Sbjct: 264 -IQTKQEKESINNELTQLKTDNDQKENELNQVRHEKDEVIEKFNTSKEENE-KIMNELSQ 321
Query: 410 LKKEMEEENRERKGGVKE 427
LK+E EE+ E K VK+
Sbjct: 322 LKQEKEEKENELKEQVKK 339
Score = 43.1 bits (100), Expect = 0.017
Identities = 58/317 (18%), Positives = 121/317 (37%), Gaps = 40/317 (12%)
Query: 133 NVSN-----KNGIHEPPETNYGYNAKSKVLSN-----RQQQKEAEEYEEYEEQEEEKEFT 182
N+SN K I + N + VL N ++++++ E+ + +QE+E E T
Sbjct: 658 NISNEFNKTKEEIKQKENETIQLNEEKSVLLNELNQIKEEKQKIEDEKAVIQQEKENEIT 717
Query: 183 SSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKNH 242
+L ED+ E N KTEK + N ++ + K+
Sbjct: 718 -----------------KLNEDKTVIENELNQIKTEKQEIENELNQTKDEKQKIEDEKSK 760
Query: 243 SAAAASLAE----KLNRRVVVPVQSKQRFGGELGTESATSAAPSRYSALLQLIACGSSGP 298
S KLN + Q K+ EL A+ + + +
Sbjct: 761 LITELSNGNDGISKLNEELTQTKQEKENVLNELNQIKNEFASFKEQNTQKENELKDENNK 820
Query: 299 EFKARTQQEPRVS-------SVGTTASKQRQSVDRRDQKAFMMSCEEEEEEEAVAMMMNR 351
+ Q+ VS ++ S +Q ++++ Q+ ++ E+EE+E + + +
Sbjct: 821 VQQELEQKNNEVSKLEEEKGNISNELSNTKQELEQKKQEIITITQEKEEKENELKEQVKK 880
Query: 352 VSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANHPVLKRSNSYNEERRSKLGVEEVKLK 411
+ E ++ L N + S E+ K ++++ +E+ ++ E ++K
Sbjct: 881 IEEEKSKLITELSNGSDG--ISKLNEELTQTKQEKEEIQKALEEEKEKLERIETELKEIK 938
Query: 412 KEMEEENRERKGGVKEK 428
+ +E E+ ++EK
Sbjct: 939 EAKQELEEEKNKTIEEK 955
Score = 34.3 bits (77), Expect = 8.0
Identities = 29/127 (22%), Positives = 59/127 (45%), Gaps = 15/127 (11%)
Query: 304 TQQEPRVSSVGTTASKQRQSVDRRDQKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNL 363
T+++ + ++ + + + +++ MS EE EE + N+++E RL+
Sbjct: 1589 TEKDNDIKNLKEEIERIEKELQEKEEDMEQMSNNTEELEE----LKNKLTETQRLLE--- 1641
Query: 364 QNAEEKEYFSGSLVE------MESMKANHPVLKRSNSYNEERRSKLGVEEV--KLKKEME 415
+ +EKE S E +E + N+ + K + E+ K ++E KLK ++E
Sbjct: 1642 EEKKEKESISNEFEETKEQVLVELQRVNNEMNKMNEIKQEDENEKEELQEHINKLKSQIE 1701
Query: 416 EENRERK 422
EN + K
Sbjct: 1702 RENEQLK 1708
>gb|AAM19760.1| glutamic acid-rich protein cNBL1700 [Trichinella spiralis]
Length = 571
Score = 50.4 bits (119), Expect = 1e-04
Identities = 65/308 (21%), Positives = 113/308 (36%), Gaps = 28/308 (9%)
Query: 123 EGCSERFQQLNVSNKNGIHEPPETNYGYNAKSKVLSNRQQQKEAEEYEEYEEQEEEKEFT 182
E SE +Q + + G + E + G +S+V S +++ +EE E E+E+E+ +
Sbjct: 238 ESASE--EQTSEGEEKGASQEEEEDEGNEQESEVESQASEEQTSEEEESASEEEDEENES 295
Query: 183 SSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKTEKVVVTNNVSSRGNVTNVPPPMKNH 242
TT E E+ED A + + EK GN + +
Sbjct: 296 KEQTTEEE--------ESASEEEDEESA---SEREEKNASQEEEEDEGNESKEQTTEEEE 344
Query: 243 SAAAASLAEKLNRRVVVPVQSKQRFGGELGTE--SATSAAPSRYSALLQLIACGSSGPEF 300
SA+ E ++ + K E E S S+ S G+S E
Sbjct: 345 SASEEEDEESVSEEQTSEGEEKGASQEEEEDEGNDQESEVESQASEEQTSEEEGASEEED 404
Query: 301 KARTQQEPRVSSVGTTASKQRQSVDRRDQKAFMMSCEEEEEEEAVAMMMNRVSENPRLML 360
+ +E + + +S ++K EE+E E + + ++ SE
Sbjct: 405 EENESEEQTTEEESASEEEDEESASEGEEKNASQEEEEDEGNEQESEVESQASEE----- 459
Query: 361 GNLQNAEEKEYFSGSLVEMESMKANHPVLKRSNSYNEERRSKLGVEEVKLKKEMEEENRE 420
Q +EE+E S E E ++ + S EE + +E +E E E
Sbjct: 460 ---QTSEEEEKEGASQEEDEENES-----EEQTSEEEEEGASEEEDEESAFEEQTSEEEE 511
Query: 421 RKGGVKEK 428
KG +E+
Sbjct: 512 EKGASQEE 519
Score = 40.4 bits (93), Expect = 0.11
Identities = 52/242 (21%), Positives = 93/242 (37%), Gaps = 17/242 (7%)
Query: 110 EGGEYVLKGSELVEGCSERFQQLNVSNKN-------GIHEPPETNYGYNAKSKVLSNRQQ 162
EG E + +E E SE + +VS + G + E + G + +S+V S +
Sbjct: 331 EGNESKEQTTEEEESASEEEDEESVSEEQTSEGEEKGASQEEEEDEGNDQESEVESQASE 390
Query: 163 QKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKTEKVVV 222
++ +EE EE++EE E TT S EE + + A Q + E
Sbjct: 391 EQTSEEEGASEEEDEENESEEQTTEEESASEE--EDEESASEGEEKNASQEEEEDEGNEQ 448
Query: 223 TNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGGELGTESATSAAPS 282
+ V S+ + + A+ E + S++ G E SA
Sbjct: 449 ESEVESQASEEQTSEEEEKEGASQEEDEENESEEQT----SEEEEEGASEEEDEESAFEE 504
Query: 283 RYSALLQLIACGSSGPEFKARTQQEPRVSSVGTTASKQRQSVDRRDQKAFMMSCEEEEEE 342
+ S + E + Q+ S V + AS+++ S + + + EEE+E+
Sbjct: 505 QTSEEEEEKGASQEEEEDEENEQE----SEVESQASEEQTSEEEGASEEGQDASEEEDED 560
Query: 343 EA 344
E+
Sbjct: 561 ES 562
Score = 37.7 bits (86), Expect = 0.72
Identities = 52/290 (17%), Positives = 110/290 (37%), Gaps = 13/290 (4%)
Query: 153 KSKVLSNRQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTEELGEDEDRHEALQ 212
K + S + +E + +E +EE+ TP + S+ + +DED E
Sbjct: 121 KDEDKSESEASEEKDVSQEQNSKEEKGASEEDEDTPEEQNSKEENGSSEEDDEDASEEQA 180
Query: 213 NNTKTEKVVVTNNVSSRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGGELG 272
+N + E N VS + + + + + + + + E
Sbjct: 181 SNEEKEASEEKNTVSEERKGASEEEDEEKDDGHESEVESQASEEQTTEEGASEEEDEESA 240
Query: 273 TESATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSVGT--TASKQRQSVDRRDQK 330
+E TS + + S E +QE V S + S++ +S + +
Sbjct: 241 SEEQTSEGEEKGA---------SQEEEEDEGNEQESEVESQASEEQTSEEEESASEEEDE 291
Query: 331 AFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANHPVLK 390
+ EEEE+ + + S + R N EE++ + S + + + +
Sbjct: 292 ENESKEQTTEEEESASEEEDEESASER-EEKNASQEEEEDEGNESKEQTTEEEESASEEE 350
Query: 391 RSNSYNEERRSKLGVEEVKLKKEMEEENRERKGGVKEKCIPIKKSSKESS 440
S +EE+ S+ G E+ ++E E+E +++ V+ + + S +E +
Sbjct: 351 DEESVSEEQTSE-GEEKGASQEEEEDEGNDQESEVESQASEEQTSEEEGA 399
Score = 36.2 bits (82), Expect = 2.1
Identities = 56/273 (20%), Positives = 96/273 (34%), Gaps = 34/273 (12%)
Query: 119 SELVEGCSERFQQLNVSNKNGIHEPP---ETNYGYNAKSKVLSNRQQQKEAEEYEEYEEQ 175
SE E SE + N S + E E +A + N Q++E +E E +EQ
Sbjct: 279 SEEEESASEEEDEENESKEQTTEEEESASEEEDEESASEREEKNASQEEEEDEGNESKEQ 338
Query: 176 ----------EEEKEFTSSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKTEKVVVTNN 225
EE++E S T EE E D+ +++ E+
Sbjct: 339 TTEEEESASEEEDEESVSEEQTSEGEEKGASQEEEEDEGNDQESEVESQASEEQTSEEEG 398
Query: 226 VS--------SRGNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGGELGTESAT 277
S S T + +AS E+ N + ++ G E +E +
Sbjct: 399 ASEEEDEENESEEQTTEEESASEEEDEESASEGEEKN----ASQEEEEDEGNEQESEVES 454
Query: 278 SAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSVGTTASKQRQSVDRRDQK-AFMMSC 336
A+ + S E ++ + E S T+ ++ + + D++ AF
Sbjct: 455 QASEEQTSE--------EEEKEGASQEEDEENESEEQTSEEEEEGASEEEDEESAFEEQT 506
Query: 337 EEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEK 369
EEEEE+ + EN + Q +EE+
Sbjct: 507 SEEEEEKGASQEEEEDEENEQESEVESQASEEQ 539
Score = 34.3 bits (77), Expect = 8.0
Identities = 60/331 (18%), Positives = 112/331 (33%), Gaps = 27/331 (8%)
Query: 109 SEGGEYVLKGSELVEGCSERFQQLNVSNKNGIHEPPETNYGYNAKSKVLSNRQQQKE--- 165
SE G K + E + Q+ K+ + + + ++ K +S Q KE
Sbjct: 88 SENGVDKEKPTSKEESGEKTSQEKESEEKSSQEKDEDKSESEASEEKDVSQEQNSKEEKG 147
Query: 166 -AEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKTEKVVVTN 224
+EE E+ E++ KE S+ S EE +E++ + + NT +E+ +
Sbjct: 148 ASEEDEDTPEEQNSKEENGSSEEDDEDAS-----EEQASNEEKEASEEKNTVSEERKGAS 202
Query: 225 NVSSR----GNVTNVPPPMKNHSAAAASLAEKLNRRVVVPVQSKQRFGGELGTESATSAA 280
G+ + V +E+ + Q+ + G E S
Sbjct: 203 EEEDEEKDDGHESEVESQASEEQTTEEGASEEEDEESASEEQTSE------GEEKGASQE 256
Query: 281 PSRYSALLQLIACGSSGPEFKARTQQEPRVSSVGTTASKQRQSVDRRDQKAFMMSCEEEE 340
Q S E + ++E + Q+ + + + EEE+
Sbjct: 257 EEEDEGNEQESEVESQASEEQTSEEEESASEEEDEENESKEQTTEEEES-----ASEEED 311
Query: 341 EEEAVAMMMNRVSENPRLMLGN---LQNAEEKEYFSGSLVEMESMKANHPVLKRSNSYNE 397
EE A S+ GN Q EE+E S E + + + E
Sbjct: 312 EESASEREEKNASQEEEEDEGNESKEQTTEEEESASEEEDEESVSEEQTSEGEEKGASQE 371
Query: 398 ERRSKLGVEEVKLKKEMEEENRERKGGVKEK 428
E + +E +++ + EE + G E+
Sbjct: 372 EEEDEGNDQESEVESQASEEQTSEEEGASEE 402
>gb|AAD55931.1| Msx2 interacting nuclear target protein [Mus musculus]
gi|9790035|ref|NP_062737.1| SPEN homolog, transcriptional
regulator [Mus musculus]
Length = 3576
Score = 50.1 bits (118), Expect = 1e-04
Identities = 70/307 (22%), Positives = 117/307 (37%), Gaps = 43/307 (14%)
Query: 160 RQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKTEK 219
R QQKE E+ ++ +E E+++E + TP E E E +
Sbjct: 1539 RMQQKEKEKDQKPKEAEKQEEPETHPKTPEPAA-------ETKEPEPKAPVSAGLPAVTI 1591
Query: 220 VVVTNNVSSRG-----NVTNVPPPMKNHSAAAASLAEK---LNRRVVVPVQSKQRFGGEL 271
VVT +S P P A A ++E+ ++ V VPV+ ++
Sbjct: 1592 TVVTPEPASSAPEKAEEAAEAPSPAGEKPAEPAPVSEETKLVSEPVSVPVEQPRQSDVPP 1651
Query: 272 GTESATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSV----GTTASKQRQSVDRR 327
G +S S + A S P+ A T P V++ GTT S+ SVD +
Sbjct: 1652 GEDSRDSQDSA---------ALAPSAPQESAATDAVPCVNAEPLTPGTTVSQVESSVDPK 1702
Query: 328 DQKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANHP 387
+S + EEA + + P QNA E ++AN P
Sbjct: 1703 PSSPQPLSKLTQRSEEAEEGKVEKPDTTPSTEPDATQNAGVAS--EAQPPASEDVEANPP 1760
Query: 388 VLKRSNSYNEERRSKLGVE-------EVKLKKEMEEENRER------KGGVKEKCIPIKK 434
V + N+ +RSK V+ E + ++ E +RE+ G +K + +K
Sbjct: 1761 VAAKDRKTNKSKRSKTSVQAAAASVVEKPVTRKSERIDREKLKRSSSPRGEAQKLLELKM 1820
Query: 435 SSKESSR 441
+++ +R
Sbjct: 1821 EAEKITR 1827
>sp|Q62504|MINT_MOUSE Msx2-interacting protein (SPEN homolog) (SMART/HDAC1 associated
repressor protein)
Length = 3644
Score = 50.1 bits (118), Expect = 1e-04
Identities = 70/307 (22%), Positives = 117/307 (37%), Gaps = 43/307 (14%)
Query: 160 RQQQKEAEEYEEYEEQEEEKEFTSSTTTPHSRCSRGVSTEELGEDEDRHEALQNNTKTEK 219
R QQKE E+ ++ +E E+++E + TP E E E +
Sbjct: 1607 RMQQKEKEKDQKPKEAEKQEEPETHPKTPEPAA-------ETKEPEPKAPVSAGLPAVTI 1659
Query: 220 VVVTNNVSSRG-----NVTNVPPPMKNHSAAAASLAEK---LNRRVVVPVQSKQRFGGEL 271
VVT +S P P A A ++E+ ++ V VPV+ ++
Sbjct: 1660 TVVTPEPASSAPEKAEEAAEAPSPAGEKPAEPAPVSEETKLVSEPVSVPVEQPRQSDVPP 1719
Query: 272 GTESATSAAPSRYSALLQLIACGSSGPEFKARTQQEPRVSSV----GTTASKQRQSVDRR 327
G +S S + A S P+ A T P V++ GTT S+ SVD +
Sbjct: 1720 GEDSRDSQDSA---------ALAPSAPQESAATDAVPCVNAEPLTPGTTVSQVESSVDPK 1770
Query: 328 DQKAFMMSCEEEEEEEAVAMMMNRVSENPRLMLGNLQNAEEKEYFSGSLVEMESMKANHP 387
+S + EEA + + P QNA E ++AN P
Sbjct: 1771 PSSPQPLSKLTQRSEEAEEGKVEKPDTTPSTEPDATQNAGVAS--EAQPPASEDVEANPP 1828
Query: 388 VLKRSNSYNEERRSKLGVE-------EVKLKKEMEEENRER------KGGVKEKCIPIKK 434
V + N+ +RSK V+ E + ++ E +RE+ G +K + +K
Sbjct: 1829 VAAKDRKTNKSKRSKTSVQAAAASVVEKPVTRKSERIDREKLKRSSSPRGEAQKLLELKM 1888
Query: 435 SSKESSR 441
+++ +R
Sbjct: 1889 EAEKITR 1895
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.310 0.126 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 735,951,916
Number of Sequences: 2540612
Number of extensions: 31627809
Number of successful extensions: 192134
Number of sequences better than 10.0: 1217
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 1151
Number of HSP's that attempted gapping in prelim test: 178976
Number of HSP's gapped (non-prelim): 6764
length of query: 443
length of database: 863,360,394
effective HSP length: 131
effective length of query: 312
effective length of database: 530,540,222
effective search space: 165528549264
effective search space used: 165528549264
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0307.3