BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0290.7
(47 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB42144.1| acetyl-CoA carboxylase [Medicago sativa] gi|74381... 79 3e-14
gb|AAK59803.1| acetyl-CoA carboxylase [Lotus corniculatus] 79 3e-14
gb|AAO62902.1| acetyl-coenzyme A carboxylase [Setaria italica] 78 6e-14
emb|CAC84161.1| acetyl-coenzyme A carboxylase [Alopecurus myosur... 78 7e-14
gb|AAO32649.1| plastid acetyl-CoA carboxylase [Lolium rigidum] g... 78 7e-14
gb|AAC39332.1| acetyl-coenzyme A carboxylase [Triticum aestivum] 77 1e-13
pir||T02235 acetyl-CoA carboxylase (EC 6.4.1.2) - maize gi|85473... 77 1e-13
gb|AAP78897.1| acetyl-coenzyme A carboxylase ACC1B [Zea mays] 77 1e-13
gb|AAP78896.1| acetyl-coenzyme A carboxylase ACC1A [Zea mays] 77 1e-13
gb|AAO62903.1| acetyl-coenzyme A carboxylase [Setaria italica] 77 1e-13
gb|AAM51762.1| acetyl-CoA carboxylase [Aegilops speltoides subsp... 77 1e-13
gb|AAM51745.1| acetyl-CoA carboxylase [Triticum aestivum] gi|213... 77 1e-13
gb|AAM51742.1| acetyl-CoA carboxylase [Secale cereale] 77 1e-13
gb|AAM51735.1| acetyl-CoA carboxylase [Hordeum vulgare subsp. vu... 77 1e-13
gb|AAO32637.1| acetyl-CoA carboxylase [Zea mays] 77 1e-13
gb|AAC39330.1| acetyl-coenzyme A carboxylase [Triticum aestivum]... 77 1e-13
gb|AAO19890.1| acetyl-CoA carboxylase [Panicum virgatum] gi|2757... 77 1e-13
gb|AAL02056.1| acetyl-coenzyme A carboxylase [Setaria italica] 77 1e-13
gb|AAC39331.1| acetyl-coenzyme A carboxylase [Triticum aestivum] 77 1e-13
emb|CAC16140.1| acetyl coa carboxylase [Brassica napus] 77 1e-13
>gb|AAB42144.1| acetyl-CoA carboxylase [Medicago sativa] gi|7438102|pir||T09538
acetyl-CoA carboxylase (EC 6.4.1.2) - alfalfa
Length = 2257
Score = 79.3 bits (194), Expect = 3e-14
Identities = 36/43 (83%), Positives = 38/43 (87%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 441 DPDDGFTPTGGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 483
>gb|AAK59803.1| acetyl-CoA carboxylase [Lotus corniculatus]
Length = 57
Score = 79.3 bits (194), Expect = 3e-14
Identities = 36/43 (83%), Positives = 38/43 (87%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 15 DPDDGFKPTGGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 57
>gb|AAO62902.1| acetyl-coenzyme A carboxylase [Setaria italica]
Length = 2321
Score = 78.2 bits (191), Expect = 6e-14
Identities = 34/43 (79%), Positives = 39/43 (90%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF+DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFVDSQ 576
>emb|CAC84161.1| acetyl-coenzyme A carboxylase [Alopecurus myosuroides]
Length = 2320
Score = 77.8 bits (190), Expect = 7e-14
Identities = 34/43 (79%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
NPD GF PTG +V+E+ FKSKPNVW YFSVKSGGGIHEF DSQ
Sbjct: 537 NPDDGFKPTGGKVKEISFKSKPNVWGYFSVKSGGGIHEFADSQ 579
>gb|AAO32649.1| plastid acetyl-CoA carboxylase [Lolium rigidum]
gi|28172925|gb|AAO32648.1| plastid acetyl-CoA
carboxylase [Lolium rigidum]
Length = 232
Score = 77.8 bits (190), Expect = 7e-14
Identities = 34/43 (79%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
NPD GF PTG +V+E+ FKSKPNVW YFSVKSGGGIHEF DSQ
Sbjct: 172 NPDDGFKPTGGKVKEISFKSKPNVWGYFSVKSGGGIHEFADSQ 214
>gb|AAC39332.1| acetyl-coenzyme A carboxylase [Triticum aestivum]
Length = 619
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>pir||T02235 acetyl-CoA carboxylase (EC 6.4.1.2) - maize
gi|854731|gb|AAA80214.1| acetyl-coenzyme A carboxylase
Length = 2325
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>gb|AAP78897.1| acetyl-coenzyme A carboxylase ACC1B [Zea mays]
Length = 2325
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>gb|AAP78896.1| acetyl-coenzyme A carboxylase ACC1A [Zea mays]
Length = 2324
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>gb|AAO62903.1| acetyl-coenzyme A carboxylase [Setaria italica]
Length = 2321
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>gb|AAM51762.1| acetyl-CoA carboxylase [Aegilops speltoides subsp. ligustica]
gi|21396765|gb|AAM51761.1| acetyl-CoA carboxylase
[Aegilops speltoides subsp. ligustica]
gi|21396763|gb|AAM51760.1| acetyl-CoA carboxylase
[Aegilops speltoides subsp. speltoides]
gi|21396761|gb|AAM51759.1| acetyl-CoA carboxylase
[Aegilops speltoides subsp. speltoides]
gi|21396759|gb|AAM51758.1| acetyl-CoA carboxylase
[Aegilops longissima] gi|21396757|gb|AAM51757.1|
acetyl-CoA carboxylase [Aegilops longissima]
gi|21396755|gb|AAM51756.1| acetyl-CoA carboxylase
[Aegilops speltoides subsp. speltoides]
gi|21396753|gb|AAM51755.1| acetyl-CoA carboxylase
[Aegilops searsii] gi|21396751|gb|AAM51754.1| acetyl-CoA
carboxylase [Aegilops searsii]
gi|21396749|gb|AAM51753.1| acetyl-CoA carboxylase
[Aegilops speltoides subsp. speltoides]
gi|21396747|gb|AAM51752.1| acetyl-CoA carboxylase
[Aegilops sharonensis] gi|21396745|gb|AAM51751.1|
acetyl-CoA carboxylase [Aegilops sharonensis]
gi|21396743|gb|AAM51750.1| acetyl-CoA carboxylase
[Aegilops searsii] gi|21396741|gb|AAM51749.1| acetyl-CoA
carboxylase [Aegilops speltoides subsp. ligustica]
gi|21396739|gb|AAM51748.1| acetyl-CoA carboxylase
[Aegilops searsii] gi|21396737|gb|AAM51747.1| acetyl-CoA
carboxylase [Aegilops bicornis]
gi|21396735|gb|AAM51746.1| acetyl-CoA carboxylase
[Aegilops speltoides subsp. speltoides]
gi|21396715|gb|AAM51736.1| acetyl-CoA carboxylase
[Triticum aestivum] gi|21396711|gb|AAM51734.1|
acetyl-CoA carboxylase [Aegilops speltoides subsp.
speltoides] gi|21396709|gb|AAM51733.1| acetyl-CoA
carboxylase [Triticum turgidum subsp. dicoccoides]
gi|21396707|gb|AAM51732.1| acetyl-CoA carboxylase
[Triticum turgidum subsp. dicoccoides]
gi|21396705|gb|AAM51731.1| acetyl-CoA carboxylase
[Triticum timopheevii subsp. timopheevii]
gi|21396701|gb|AAM51729.1| acetyl-CoA carboxylase
[Triticum timopheevii subsp. armeniacum]
gi|21396697|gb|AAM51727.1| acetyl-CoA carboxylase
[Aegilops tauschii subsp. tauschii]
gi|21396695|gb|AAM51726.1| acetyl-CoA carboxylase
[Triticum turgidum subsp. dicoccoides]
gi|21396691|gb|AAM51724.1| acetyl-CoA carboxylase
[Triticum aestivum] gi|21396687|gb|AAM51722.1|
acetyl-CoA carboxylase [Aegilops tauschii subsp.
tauschii]
Length = 232
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 172 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 214
>gb|AAM51745.1| acetyl-CoA carboxylase [Triticum aestivum]
gi|21396731|gb|AAM51744.1| acetyl-CoA carboxylase
[Triticum urartu] gi|21396729|gb|AAM51743.1| acetyl-CoA
carboxylase [Triticum monococcum subsp. monococcum]
gi|21396725|gb|AAM51741.1| acetyl-CoA carboxylase
[Triticum monococcum subsp. monococcum]
gi|21396723|gb|AAM51740.1| acetyl-CoA carboxylase
[Triticum timopheevii subsp. armeniacum]
gi|21396721|gb|AAM51739.1| acetyl-CoA carboxylase
[Triticum monococcum subsp. monococcum]
gi|21396719|gb|AAM51738.1| acetyl-CoA carboxylase
[Triticum turgidum subsp. dicoccoides]
gi|21396717|gb|AAM51737.1| acetyl-CoA carboxylase
[Triticum turgidum subsp. dicoccoides]
gi|21396703|gb|AAM51730.1| acetyl-CoA carboxylase
[Triticum baeoticum] gi|21396699|gb|AAM51728.1|
acetyl-CoA carboxylase [Triticum baeoticum]
gi|21396693|gb|AAM51725.1| acetyl-CoA carboxylase
[Triticum turgidum subsp. dicoccoides]
gi|21396689|gb|AAM51723.1| acetyl-CoA carboxylase
[Triticum timopheevii subsp. timopheevii]
Length = 232
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 172 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 214
>gb|AAM51742.1| acetyl-CoA carboxylase [Secale cereale]
Length = 232
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 172 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 214
>gb|AAM51735.1| acetyl-CoA carboxylase [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 172 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 214
>gb|AAO32637.1| acetyl-CoA carboxylase [Zea mays]
Length = 232
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 172 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 214
>gb|AAC39330.1| acetyl-coenzyme A carboxylase [Triticum aestivum]
gi|7438101|pir||T06161 acetyl-CoA carboxylase (EC
6.4.1.2) - wheat
Length = 2311
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>gb|AAO19890.1| acetyl-CoA carboxylase [Panicum virgatum]
gi|27572979|gb|AAO19889.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572977|gb|AAO19888.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572975|gb|AAO19887.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572973|gb|AAO19886.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572971|gb|AAO19885.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572969|gb|AAO19884.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572967|gb|AAO19883.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572965|gb|AAO19882.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572963|gb|AAO19881.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572961|gb|AAO19880.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572959|gb|AAO19879.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572957|gb|AAO19878.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572955|gb|AAO19877.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572953|gb|AAO19876.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572951|gb|AAO19875.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572949|gb|AAO19874.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572947|gb|AAO19873.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572945|gb|AAO19872.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572943|gb|AAO19871.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572941|gb|AAO19870.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572939|gb|AAO19869.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572937|gb|AAO19868.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572935|gb|AAO19867.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572933|gb|AAO19866.1| acetyl-CoA
carboxylase [Panicum virgatum]
gi|27572931|gb|AAO19865.1| acetyl-CoA carboxylase
[Panicum virgatum] gi|27572929|gb|AAO19864.1| acetyl-CoA
carboxylase [Panicum virgatum]
Length = 232
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 172 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 214
>gb|AAL02056.1| acetyl-coenzyme A carboxylase [Setaria italica]
Length = 2321
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>gb|AAC39331.1| acetyl-coenzyme A carboxylase [Triticum aestivum]
Length = 619
Score = 77.4 bits (189), Expect = 1e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>emb|CAC16140.1| acetyl coa carboxylase [Brassica napus]
Length = 796
Score = 77.0 bits (188), Expect = 1e-13
Identities = 35/43 (81%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PT +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 119 DPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 161
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.142 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,628,250
Number of Sequences: 2540612
Number of extensions: 2897449
Number of successful extensions: 4337
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4204
Number of HSP's gapped (non-prelim): 133
length of query: 47
length of database: 863,360,394
effective HSP length: 23
effective length of query: 24
effective length of database: 804,926,318
effective search space: 19318231632
effective search space used: 19318231632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0290.7