BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0269b.6
(141 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA33925.1| unnamed protein product [Oryza sativa (japonica ... 174 5e-43
gb|AAR91097.1| hypothetical protein [Zea mays] gi|902308|emb|CAA... 172 2e-42
gb|AAT44674.1| hypothetical protein 137 [Saccharum hybrid cultiv... 172 2e-42
ref|XP_482748.1| chloroplast ORF137 [Oryza sativa (japonica cult... 171 4e-42
ref|XP_450629.1| putative ORF137 [Oryza sativa (japonica cultiva... 136 1e-31
dbj|BAA79129.1| 138aa long hypothetical protein [Aeropyrum perni... 38 0.059
ref|ZP_00285518.1| hypothetical protein Efae03002558 [Enterococc... 34 0.86
sp|P08461|ODP2_RAT Dihydrolipoyllysine-residue acetyltransferase... 33 1.1
ref|XP_343390.1| PREDICTED: dihydrolipoamide S-acetyltransferase... 33 1.1
pir||I55976 dihydrolipoamide S-acetyltransferase (EC 2.3.1.12), ... 33 1.1
dbj|BAA01504.1| dihydrolipoamide acetyltransferase [Rattus norve... 33 1.1
gb|EAL26646.1| GA10744-PA [Drosophila pseudoobscura] 32 3.3
emb|CAF93934.1| unnamed protein product [Tetraodon nigroviridis] 32 3.3
gb|AAH69862.1| Dihydrolipoamide S-acetyltransferase (E2 componen... 32 4.3
ref|NP_001003083.1| glycoprotein Ib [Canis familiaris] gi|306855... 32 4.3
ref|NP_663589.2| dihydrolipoamide S-acetyltransferase (E2 compon... 32 4.3
emb|CAI19904.1| RP4-676J13.1 [Homo sapiens] gi|56203194|emb|CAI2... 32 4.3
ref|XP_518614.1| PREDICTED: similar to NADPH cytochrome B5 oxido... 32 4.3
gb|EAK88507.1| hypothetical protein, proline rich C-terminus, si... 32 4.3
gb|AAH31495.1| Dihydrolipoamide S-acetyltransferase (E2 componen... 32 4.3
>emb|CAA33925.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|12029|emb|CAA33937.1| unnamed protein product [Oryza
sativa (japonica cultivar-group)]
gi|50942975|ref|XP_481015.1| ORF137 [Oryza sativa
(japonica cultivar-group)] gi|11466867|ref|NP_039464.1|
hypothetical protein OrsajCp110 [Oryza sativa (japonica
cultivar-group)] gi|11466831|ref|NP_039428.1|
hypothetical protein OrsajCp070 [Oryza sativa (japonica
cultivar-group)] gi|50234063|ref|YP_052840.1|
hypothetical protein OrniCp115 [Oryza nivara]
gi|50234016|ref|YP_052794.1| hypothetical protein
OrniCp068 [Oryza nivara] gi|40253568|dbj|BAD05514.1|
ORF137 [Oryza sativa (japonica cultivar-group)]
gi|49615087|dbj|BAD26870.1| unnamed protein product
[Oryza nivara] gi|49615040|dbj|BAD26823.1| unnamed
protein product [Oryza nivara]
gi|51091518|dbj|BAD36256.1| ORF137 [Oryza sativa
(japonica cultivar-group)] gi|82519|pir||JQ0269
hypothetical 15K protein (trnH-trnV intergenic region)
- rice chloroplast gi|50725162|dbj|BAD33779.1| ORF137
[Oryza sativa (japonica cultivar-group)]
gi|6176571|sp|Q36996|YC72_ORYSA Hypothetical 14.9 kDa
protein ycf72 (ORF137) gi|226651|prf||1603356CB ORF 137
Length = 137
Score = 174 bits (440), Expect = 5e-43
Identities = 79/94 (84%), Positives = 82/94 (87%)
Query: 6 FTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLDIKRTSP 65
F PPPWGWSTGFITTPLTTGRLPSQH DPALPKLFWFTPT PTCPTVA+QF D KRTSP
Sbjct: 4 FPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSP 63
Query: 66 EGNFNVADFPSFAISFATAPAALANFPPFPNVIT 99
+GN VAD PSFAISFATAPAALAN PP P VI+
Sbjct: 64 DGNLKVADLPSFAISFATAPAALANCPPLPRVIS 97
>gb|AAR91097.1| hypothetical protein [Zea mays] gi|902308|emb|CAA60372.1|
hypothetical protein [Zea mays]
gi|902263|emb|CAA60328.1| hypothetical protein [Zea
mays] gi|11467279|ref|NP_043111.1| hypothetical protein
ZemaCp110 [Zea mays] gi|11467234|ref|NP_043067.1|
hypothetical protein ZemaCp066 [Zea mays]
gi|2130150|pir||S58640 hypothetical protein 137 - maize
chloroplast gi|6136630|sp|Q37082|YC72_MAIZE
HYPOTHETICAL 14.9 KD PROTEIN YCF72 (ORF137)
Length = 137
Score = 172 bits (435), Expect = 2e-42
Identities = 78/94 (82%), Positives = 82/94 (86%)
Query: 6 FTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLDIKRTSP 65
F PPPWGWSTGFITTPLTTGRLPSQH DPALPKLFWFTPT PTCPTVA+QF D KRTSP
Sbjct: 4 FPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSP 63
Query: 66 EGNFNVADFPSFAISFATAPAALANFPPFPNVIT 99
+GN VA+ PSFAISFATAPAALAN PP P VI+
Sbjct: 64 DGNLKVANLPSFAISFATAPAALANCPPLPRVIS 97
>gb|AAT44674.1| hypothetical protein 137 [Saccharum hybrid cultivar SP-80-3280]
gi|48478617|gb|AAT44637.1| hypothetical protein 137
[Saccharum hybrid cultivar SP-80-3280]
gi|50812620|ref|YP_054721.1| hypothetical protein
SaofCp115 [Saccharum officinarum]
gi|50812571|ref|YP_054673.1| hypothetical protein
SaofCp067 [Saccharum officinarum]
gi|48478752|ref|YP_024360.1| hypothetical protein 137
[Saccharum hybrid cultivar SP-80-3280]
gi|48478715|ref|YP_024322.1| hypothetical protein 137
[Saccharum hybrid cultivar SP-80-3280]
gi|49659604|dbj|BAD27385.1| hypothetical protein
[Saccharum officinarum] gi|49659555|dbj|BAD27336.1|
hypothetical protein [Saccharum officinarum]
Length = 137
Score = 172 bits (435), Expect = 2e-42
Identities = 78/94 (82%), Positives = 82/94 (86%)
Query: 6 FTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLDIKRTSP 65
F PPPWGWSTGFITTPLTTGRLPSQH DPALPKLFWFTPT PTCPTVA+QF D KRTSP
Sbjct: 4 FPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSP 63
Query: 66 EGNFNVADFPSFAISFATAPAALANFPPFPNVIT 99
+GN VA+ PSFAISFATAPAALAN PP P VI+
Sbjct: 64 DGNLKVANLPSFAISFATAPAALANCPPLPRVIS 97
>ref|XP_482748.1| chloroplast ORF137 [Oryza sativa (japonica cultivar-group)]
gi|42409134|dbj|BAD10402.1| chloroplast ORF137 [Oryza
sativa (japonica cultivar-group)]
gi|42408624|dbj|BAD09799.1| chloroplast ORF137 [Oryza
sativa (japonica cultivar-group)]
Length = 137
Score = 171 bits (432), Expect = 4e-42
Identities = 78/94 (82%), Positives = 81/94 (85%)
Query: 6 FTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLDIKRTSP 65
F PPPWGWSTGFITT LTTGRLPSQH DPALPKLFWFTPT PTCPTVA+QF D KRTSP
Sbjct: 4 FPSPPPWGWSTGFITTSLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSP 63
Query: 66 EGNFNVADFPSFAISFATAPAALANFPPFPNVIT 99
+GN VAD PSFAISFATAPAALAN PP P VI+
Sbjct: 64 DGNLKVADLPSFAISFATAPAALANCPPLPRVIS 97
>ref|XP_450629.1| putative ORF137 [Oryza sativa (japonica cultivar-group)]
gi|50726202|dbj|BAD33721.1| putative ORF137 [Oryza
sativa (japonica cultivar-group)]
Length = 110
Score = 136 bits (342), Expect = 1e-31
Identities = 61/74 (82%), Positives = 62/74 (83%)
Query: 6 FTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLDIKRTSP 65
F PPPW WSTGFITTPLTTGRLPSQH DPALPKLFWFT T PTCPTVA+QF D KRTSP
Sbjct: 4 FPSPPPWRWSTGFITTPLTTGRLPSQHLDPALPKLFWFTSTLPTCPTVAKQFWDTKRTSP 63
Query: 66 EGNFNVADFPSFAI 79
GN VAD PSFAI
Sbjct: 64 NGNLKVADLPSFAI 77
>dbj|BAA79129.1| 138aa long hypothetical protein [Aeropyrum pernix K1]
gi|7515638|pir||G72778 hypothetical protein APE0217 -
Aeropyrum pernix (strain K1)
Length = 138
Score = 37.7 bits (86), Expect = 0.059
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 9 PPPWGWSTGFITTPLTTGRLPSQHF-----DPALPKLFWFTPTFPTCPTVAEQFLDIKRT 63
PPP GWST FI TPLT G + F PA F P P VA + L +
Sbjct: 60 PPPKGWSTAFIATPLTLGHFLALTFHLWYAKPAFIIGFSILPAPAGMPMVALESLGTSLS 119
Query: 64 SPEGN 68
P G+
Sbjct: 120 FPLGS 124
>ref|ZP_00285518.1| hypothetical protein Efae03002558 [Enterococcus faecium]
Length = 53
Score = 33.9 bits (76), Expect = 0.86
Identities = 18/43 (41%), Positives = 27/43 (61%), Gaps = 4/43 (9%)
Query: 40 LFWFTPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFA 82
LF+F+ T PT T EQF+D KR+ P+ +AD+ S + F+
Sbjct: 2 LFYFSYTKPTFSTKEEQFMDFKRSYPK----LADYLSNRVDFS 40
>sp|P08461|ODP2_RAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex (E2) (Dihydrolipoamide
acetyltransferase component of pyruvate dehydrogenase
complex) (PDC-E2) (70 kDa mitochondrial autoantigen of
primary biliary cirrhosis) (PBC)
Length = 555
Score = 33.5 bits (75), Expect = 1.1
Identities = 32/97 (32%), Positives = 38/97 (38%), Gaps = 11/97 (11%)
Query: 4 PPFTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLD---I 60
PP PPP P+ P+ PA PK F AE+ +D +
Sbjct: 232 PPPVPPPVAA------VPPIPQPLAPTPSAAPAGPKGRVFVSPLAK-KLAAEKGIDLTQV 284
Query: 61 KRTSPEGNFNVADFPSFAISFATAPAALANFPPFPNV 97
K T PEG D SF + APAA A PP P V
Sbjct: 285 KGTGPEGRIIKKDIDSF-VPTKAAPAAAAAAPPGPRV 320
>ref|XP_343390.1| PREDICTED: dihydrolipoamide S-acetyltransferase (E2 component of
pyruvate dehydrogenase complex) [Rattus norvegicus]
Length = 632
Score = 33.5 bits (75), Expect = 1.1
Identities = 32/97 (32%), Positives = 38/97 (38%), Gaps = 11/97 (11%)
Query: 4 PPFTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLD---I 60
PP PPP P+ P+ PA PK F AE+ +D +
Sbjct: 309 PPPVPPPVAA------VPPIPQPLAPTPSAAPAGPKGRVFVSPLAK-KLAAEKGIDLTQV 361
Query: 61 KRTSPEGNFNVADFPSFAISFATAPAALANFPPFPNV 97
K T PEG D SF + APAA A PP P V
Sbjct: 362 KGTGPEGRIIKKDIDSF-VPTKAAPAAAAAAPPGPRV 397
>pir||I55976 dihydrolipoamide S-acetyltransferase (EC 2.3.1.12), liver - rat
(fragment) gi|2951762|dbj|BAA20956.1| 70 kd
mitochondrial autoantigen [Rattus norvegicus]
gi|206038|gb|AAA41813.1| primary biliary cirrhosis
autoantigen
Length = 457
Score = 33.5 bits (75), Expect = 1.1
Identities = 32/97 (32%), Positives = 38/97 (38%), Gaps = 11/97 (11%)
Query: 4 PPFTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLD---I 60
PP PPP P+ P+ PA PK F AE+ +D +
Sbjct: 147 PPPVPPPVAA------VPPIPQPLAPTPSAAPAGPKGRVFVSPLAK-KLAAEKGIDLTQV 199
Query: 61 KRTSPEGNFNVADFPSFAISFATAPAALANFPPFPNV 97
K T PEG D SF + APAA A PP P V
Sbjct: 200 KGTGPEGRIIKKDIDSF-VPTKAAPAAAAAAPPGPRV 235
>dbj|BAA01504.1| dihydrolipoamide acetyltransferase [Rattus norvegicus]
Length = 541
Score = 33.5 bits (75), Expect = 1.1
Identities = 32/97 (32%), Positives = 38/97 (38%), Gaps = 11/97 (11%)
Query: 4 PPFTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLD---I 60
PP PPP P+ P+ PA PK F AE+ +D +
Sbjct: 218 PPPVPPPVAA------VPPIPQPLAPTPSAAPAGPKGRVFVSPLAK-KLAAEKGIDLTQV 270
Query: 61 KRTSPEGNFNVADFPSFAISFATAPAALANFPPFPNV 97
K T PEG D SF + APAA A PP P V
Sbjct: 271 KGTGPEGRIIKKDIDSF-VPTKAAPAAAAAAPPGPRV 306
>gb|EAL26646.1| GA10744-PA [Drosophila pseudoobscura]
Length = 1047
Score = 32.0 bits (71), Expect = 3.3
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 15 STGFITTPLTTGRLPSQHFD----PALPKLFWFTPTFPTCPTVAEQFLDIKRTSPEGNFN 70
+TG TTP+T + FD PA + F + P P + F + T P G
Sbjct: 697 ATGTATTPMTAE--DNSPFDSSTVPAWLRDFDYPDVGPGVPYNPDNFKEAALTQPAGASR 754
Query: 71 VADFPSFAISFATAPAALANFPPFPNVIT 99
P I APAA + FP++++
Sbjct: 755 SPTIPPTPIPTRAAPAAASVSSAFPSIVS 783
>emb|CAF93934.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1479
Score = 32.0 bits (71), Expect = 3.3
Identities = 23/90 (25%), Positives = 40/90 (43%), Gaps = 9/90 (10%)
Query: 3 GPPFTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLDIKR 62
GPP TP PP T+P +GR+ F L K ++ E+ +DI +
Sbjct: 525 GPPLTPVPP--------TSPTWSGRVVESCFPQVLRKFRAHETNLLIATSIVEEGVDIPK 576
Query: 63 TSPEGNFNV-ADFPSFAISFATAPAALANF 91
+ F++ ++ S+ S A A ++N+
Sbjct: 577 CNLVVRFDLPTEYRSYVQSKGRARAPVSNY 606
>gb|AAH69862.1| Dihydrolipoamide S-acetyltransferase (E2 component of pyruvate
dehydrogenase complex) [Mus musculus]
gi|20071885|gb|AAH26680.1| Dihydrolipoamide
S-acetyltransferase (E2 component of pyruvate
dehydrogenase complex) [Mus musculus]
Length = 642
Score = 31.6 bits (70), Expect = 4.3
Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 15/97 (15%)
Query: 4 PPFTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLD---I 60
PP PP TP PS PA PK F AE+ +D +
Sbjct: 323 PPVAAVPP---------TPQPVAPTPSAA--PAGPKGRVFVSPLAK-KLAAEKGIDLTQV 370
Query: 61 KRTSPEGNFNVADFPSFAISFATAPAALANFPPFPNV 97
K T PEG D SF S A AA A PP P V
Sbjct: 371 KGTGPEGRIIKKDIDSFVPSKAAPAAAAAMAPPGPRV 407
>ref|NP_001003083.1| glycoprotein Ib [Canis familiaris] gi|3068553|gb|AAC14361.1|
glycoprotein Ib [Canis familiaris]
Length = 677
Score = 31.6 bits (70), Expect = 4.3
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 4 PPFTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTC--PTVAEQFLD-- 59
P TP P +T P TT P P +P+L PT PT PT+ L+
Sbjct: 437 PATTPTTPQPATTPTTPQPATTPTTPQPTTTPTIPEL----PTPPTTPEPTMPPTTLEPT 492
Query: 60 IKRTSPEGNFNVADFPSF-AISFATAPAALANFPPFPNVI 98
TSP +++ +F I T+P + +P P+++
Sbjct: 493 TTPTSPTTTLILSESNTFLGIPELTSPCTTSEYPIVPSLV 532
>ref|NP_663589.2| dihydrolipoamide S-acetyltransferase (E2 component of pyruvate
dehydrogenase complex) [Mus musculus]
gi|26327949|dbj|BAC27715.1| unnamed protein product [Mus
musculus]
Length = 642
Score = 31.6 bits (70), Expect = 4.3
Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 15/97 (15%)
Query: 4 PPFTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLD---I 60
PP PP TP PS PA PK F AE+ +D +
Sbjct: 323 PPVAAVPP---------TPQPVAPTPSAA--PAGPKGRVFVSPLAK-KLAAEKGIDLTQV 370
Query: 61 KRTSPEGNFNVADFPSFAISFATAPAALANFPPFPNV 97
K T PEG D SF S A AA A PP P V
Sbjct: 371 KGTGPEGRIIKKDIDSFVPSKAAPAAAAAMAPPGPRV 407
>emb|CAI19904.1| RP4-676J13.1 [Homo sapiens] gi|56203194|emb|CAI22325.1|
RP4-676J13.1 [Homo sapiens] gi|19263483|gb|AAH25380.1|
NADPH cytochrome B5 oxidoreductase [Homo sapiens]
gi|6166392|gb|AAF04812.1| flavohemoprotein b5+b5R [Homo
sapiens] gi|7705899|ref|NP_057314.1| NADPH cytochrome B5
oxidoreductase [Homo sapiens]
Length = 487
Score = 31.6 bits (70), Expect = 4.3
Identities = 34/126 (26%), Positives = 58/126 (45%), Gaps = 17/126 (13%)
Query: 21 TPLTTGRLPSQHFDPALPK---LFWFTPTFPTCPTVAE----QFLD-IKRTSPEGNFNVA 72
TP++ G L S+ +P LP +++ +PT E Q D + +SPEGNF ++
Sbjct: 293 TPVS-GSLLSEFKEPVLPNNKYIYFLIKIYPTGLFTPELDRLQIGDFVSVSSPEGNFKIS 351
Query: 73 DFPSFAISFATAPAALANFPPFPNVITHFFINRTFYKR------HKTKRDNPSRAKL*KV 126
F F AA F P ++ + + ++ +KT+ D R++L K+
Sbjct: 352 KFQELEDLFLL--AAGTGFTPMVKILNYALTDIPSLRKVKLMFFNKTEDDIIWRSQLEKL 409
Query: 127 PFKIKQ 132
FK K+
Sbjct: 410 AFKDKR 415
>ref|XP_518614.1| PREDICTED: similar to NADPH cytochrome B5 oxidoreductase;
flavohemoprotein b5+b5R [Pan troglodytes]
Length = 595
Score = 31.6 bits (70), Expect = 4.3
Identities = 34/126 (26%), Positives = 58/126 (45%), Gaps = 17/126 (13%)
Query: 21 TPLTTGRLPSQHFDPALPK---LFWFTPTFPTCPTVAE----QFLD-IKRTSPEGNFNVA 72
TP++ G L S+ +P LP +++ +PT E Q D + +SPEGNF ++
Sbjct: 418 TPVS-GSLLSEFKEPVLPNNKYIYFLIKIYPTGLFTPELDRLQIGDFVSVSSPEGNFKIS 476
Query: 73 DFPSFAISFATAPAALANFPPFPNVITHFFINRTFYKR------HKTKRDNPSRAKL*KV 126
F F AA F P ++ + + ++ +KT+ D R++L K+
Sbjct: 477 KFQELEDLFLL--AAGTGFTPMVKILNYALTDIPSLRKVKLMFFNKTEDDIIWRSQLEKL 534
Query: 127 PFKIKQ 132
FK K+
Sbjct: 535 AFKDKR 540
>gb|EAK88507.1| hypothetical protein, proline rich C-terminus, signal peptide, very
large protein [Cryptosporidium parvum]
gi|66361898|ref|XP_627913.1| hypothetical protein
cgd1_590 [Cryptosporidium parvum]
Length = 2527
Score = 31.6 bits (70), Expect = 4.3
Identities = 23/55 (41%), Positives = 24/55 (42%), Gaps = 5/55 (9%)
Query: 3 GPPFTPPPPWGWSTGFITTPL-----TTGRLPSQHFDPALPKLFWFTPTFPTCPT 52
GP TPP P ST I+TP T PS P LPKL P P PT
Sbjct: 2338 GPAGTPPAPTPISTPTISTPTLPTLPPTPPSPSSPPSPTLPKLPPLPPLPPLPPT 2392
>gb|AAH31495.1| Dihydrolipoamide S-acetyltransferase (E2 component of pyruvate
dehydrogenase complex) [Mus musculus]
Length = 642
Score = 31.6 bits (70), Expect = 4.3
Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 15/97 (15%)
Query: 4 PPFTPPPPWGWSTGFITTPLTTGRLPSQHFDPALPKLFWFTPTFPTCPTVAEQFLD---I 60
PP PP TP PS PA PK F AE+ +D +
Sbjct: 323 PPVAAVPP---------TPQPVAPTPSAA--PAGPKGRVFVSPLAK-KLAAEKGIDLTQV 370
Query: 61 KRTSPEGNFNVADFPSFAISFATAPAALANFPPFPNV 97
K T PEG D SF S A AA A PP P V
Sbjct: 371 KGTGPEGRIIKKDIDSFVPSKAVPAAAAAMAPPGPRV 407
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.329 0.144 0.500
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 302,613,637
Number of Sequences: 2540612
Number of extensions: 13629718
Number of successful extensions: 38724
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 38685
Number of HSP's gapped (non-prelim): 73
length of query: 141
length of database: 863,360,394
effective HSP length: 117
effective length of query: 24
effective length of database: 566,108,790
effective search space: 13586610960
effective search space used: 13586610960
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0269b.6