BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0269b.11
(146 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB33209.1| cytochrome f [Lotus corniculatus var. japonicus]... 263 8e-70
gb|AAQ08970.1| cytochrome f [Fagus sylvatica] gi|33327178|gb|AAQ... 244 2e-64
ref|YP_086979.1| cytochrome f [Panax ginseng] gi|51235326|gb|AAT... 242 1e-63
emb|CAA77365.1| cytochrome f [Nicotiana tabacum] gi|11465970|ref... 241 3e-63
sp|P36438|CYF_BRARA Apocytochrome f precursor gi|441282|emb|CAA5... 241 3e-63
dbj|BAA84398.1| cytochrome f [Arabidopsis thaliana] gi|7525046|r... 241 3e-63
pdb|1TKW|B Chain B, The Transient Complex Of Poplar Plastocyanin... 241 3e-63
pdb|2PCF|B Chain B, The Complex Of Cytochrome F And Plastocyanin... 241 3e-63
emb|CAA28587.1| apocytochrome f [Vicia faba] gi|118054|sp|P06669... 240 5e-63
emb|CAD28734.1| cytochrome f [Calycanthus floridus var. glaucus]... 239 1e-62
emb|CAC88057.1| cytochrome f [Atropa belladonna] gi|28261730|ref... 239 1e-62
sp|P49161|CYF_SOYBN Apocytochrome f precursor gi|984315|gb|AAA80... 239 1e-62
emb|CAA27251.1| unnamed protein product [Oenothera elata subsp. ... 237 4e-62
emb|CAB67170.1| cytochrome f [Oenothera elata subsp. hookeri] gi... 237 4e-62
emb|CAB88742.1| cytochrome f [Spinacia oleracea] gi|11497541|ref... 237 5e-62
gb|AAA84632.1| apocytochrome f precursor 237 5e-62
emb|CAA60298.1| cytochrome f [Zea mays] gi|11467204|ref|NP_04303... 236 9e-62
gb|AAT44705.1| cytochrome f [Saccharum hybrid cultivar SP-80-328... 235 2e-61
gb|AAA85363.1| cytochrome f [Pisum sativum] 234 3e-61
sp|P00155|CYF_PEA Apocytochrome f precursor 234 3e-61
>dbj|BAB33209.1| cytochrome f [Lotus corniculatus var. japonicus]
gi|13518451|ref|NP_084811.1| cytochrome f [Lotus
corniculatus var. japonicus]
gi|27734239|sp|Q9BBR8|CYF_LOTJA Apocytochrome f
precursor
Length = 320
Score = 263 bits (671), Expect = 8e-70
Identities = 128/134 (95%), Positives = 131/134 (97%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV
Sbjct: 94 QVLANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNAT SGI
Sbjct: 154 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTSGI 213
Query: 133 INKIIRKDKGGIHL 146
INKIIRKDKGG +
Sbjct: 214 INKIIRKDKGGYEI 227
>gb|AAQ08970.1| cytochrome f [Fagus sylvatica] gi|33327178|gb|AAQ08967.1|
cytochrome f [Fagus sylvatica]
gi|33327174|gb|AAQ08964.1| cytochrome f [Fagus
sylvatica]
Length = 254
Score = 244 bits (624), Expect = 2e-64
Identities = 116/134 (86%), Positives = 128/134 (94%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGKRG+LNVGAVLILPEGFELAP DRISPEIKEK+GNLSFQ+YRPTKKNILV+GPV
Sbjct: 95 QVLANGKRGSLNVGAVLILPEGFELAPPDRISPEIKEKIGNLSFQNYRPTKKNILVIGPV 154
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPILSPDPAT +DV+FLKYPIYVGGNRGRGQIYPDGSKSNNNVYNAT GI
Sbjct: 155 PGQKYSEITFPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAVGI 214
Query: 133 INKIIRKDKGGIHL 146
++KIIRK+KGG +
Sbjct: 215 VSKIIRKEKGGYEI 228
>ref|YP_086979.1| cytochrome f [Panax ginseng] gi|51235326|gb|AAT98522.1| cytochrome
f [Panax ginseng]
Length = 320
Score = 242 bits (618), Expect = 1e-63
Identities = 114/134 (85%), Positives = 127/134 (94%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP DRISPE+KE++GNLSFQSYRPTKKNILV+GPV
Sbjct: 94 QVLANGKKGALNVGAVLILPEGFELAPVDRISPEMKERIGNLSFQSYRPTKKNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPILSPDPAT +DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT +GI
Sbjct: 154 PGQKYSEITFPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGI 213
Query: 133 INKIIRKDKGGIHL 146
+ KIIRK+KGG +
Sbjct: 214 VGKIIRKEKGGYEI 227
>emb|CAA77365.1| cytochrome f [Nicotiana tabacum] gi|11465970|ref|NP_054512.1|
cytochrome f [Nicotiana tabacum]
gi|118053|sp|P06449|CYF_TOBAC Apocytochrome f precursor
gi|225213|prf||1211235AU cytochrome f
Length = 320
Score = 241 bits (615), Expect = 3e-63
Identities = 114/134 (85%), Positives = 126/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGKRG LNVGAVLILPEGFELAP DRISPE+KEK+GNLSFQSYRP KKNILV+GPV
Sbjct: 94 QVLANGKRGGLNVGAVLILPEGFELAPPDRISPEMKEKIGNLSFQSYRPNKKNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPILSPDPAT +DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT +GI
Sbjct: 154 PGQKYSEITFPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGI 213
Query: 133 INKIIRKDKGGIHL 146
++KIIRK+KGG +
Sbjct: 214 VSKIIRKEKGGYEI 227
>sp|P36438|CYF_BRARA Apocytochrome f precursor gi|441282|emb|CAA54307.1| cytochrome f
[Brassica rapa]
Length = 320
Score = 241 bits (614), Expect = 3e-63
Identities = 113/134 (84%), Positives = 127/134 (94%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP DRISPE+KEK+GNLSFQ+YRP KKNILV+GPV
Sbjct: 94 QVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGNLSFQNYRPNKKNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPIL+PDPATN+DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT GI
Sbjct: 154 PGQKYSEITFPILAPDPATNKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAGGI 213
Query: 133 INKIIRKDKGGIHL 146
I+KI+RK+KGG +
Sbjct: 214 ISKILRKEKGGYEI 227
>dbj|BAA84398.1| cytochrome f [Arabidopsis thaliana] gi|7525046|ref|NP_051072.1|
cytochrome f [Arabidopsis thaliana]
gi|6685374|sp|P56771|CYF_ARATH Apocytochrome f precursor
Length = 320
Score = 241 bits (614), Expect = 3e-63
Identities = 113/134 (84%), Positives = 127/134 (94%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP DRISPE+KEK+GNLSFQ+YRP KKNILV+GPV
Sbjct: 94 QVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGNLSFQNYRPNKKNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPIL+PDPATN+DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT GI
Sbjct: 154 PGQKYSEITFPILAPDPATNKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAGGI 213
Query: 133 INKIIRKDKGGIHL 146
I+KI+RK+KGG +
Sbjct: 214 ISKILRKEKGGYEI 227
>pdb|1TKW|B Chain B, The Transient Complex Of Poplar Plastocyanin With Turnip
Cytochrome F Determined With Paramagnetic Nmr
gi|1942179|pdb|1HCZ| Lumen-Side Domain Of Reduced
Cytochrome F At -35 Degrees Celsius
Length = 252
Score = 241 bits (614), Expect = 3e-63
Identities = 113/134 (84%), Positives = 127/134 (94%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP DRISPE+KEK+GNLSFQ+YRP KKNILV+GPV
Sbjct: 59 QVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGNLSFQNYRPNKKNILVIGPV 118
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPIL+PDPATN+DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT GI
Sbjct: 119 PGQKYSEITFPILAPDPATNKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAGGI 178
Query: 133 INKIIRKDKGGIHL 146
I+KI+RK+KGG +
Sbjct: 179 ISKILRKEKGGYEI 192
>pdb|2PCF|B Chain B, The Complex Of Cytochrome F And Plastocyanin Determined
With Paramagnetic Nmr. Based On The Structures Of
Cytochrome F And Plastocyanin, 10 Structures
gi|576077|pdb|1CTM| Cytochrome F (Reduced)
Length = 250
Score = 241 bits (614), Expect = 3e-63
Identities = 113/134 (84%), Positives = 127/134 (94%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP DRISPE+KEK+GNLSFQ+YRP KKNILV+GPV
Sbjct: 59 QVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGNLSFQNYRPNKKNILVIGPV 118
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPIL+PDPATN+DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT GI
Sbjct: 119 PGQKYSEITFPILAPDPATNKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAGGI 178
Query: 133 INKIIRKDKGGIHL 146
I+KI+RK+KGG +
Sbjct: 179 ISKILRKEKGGYEI 192
>emb|CAA28587.1| apocytochrome f [Vicia faba] gi|118054|sp|P06669|CYF_VICFA
Apocytochrome f precursor
Length = 320
Score = 240 bits (613), Expect = 5e-63
Identities = 113/134 (84%), Positives = 126/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP DR+SPEIKEK+GNLSFQSYRPTKKNI+V+GPV
Sbjct: 94 QVLANGKKGALNVGAVLILPEGFELAPPDRLSPEIKEKIGNLSFQSYRPTKKNIIVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PG+KYSEITFPILSPDPAT RDV FLKYPIYVGG RGRGQIYPDGSKSNNNVYNAT +G+
Sbjct: 154 PGKKYSEITFPILSPDPATKRDVYFLKYPIYVGGTRGRGQIYPDGSKSNNNVYNATATGV 213
Query: 133 INKIIRKDKGGIHL 146
+NK IRK+KGG +
Sbjct: 214 VNKKIRKEKGGYEI 227
>emb|CAD28734.1| cytochrome f [Calycanthus floridus var. glaucus]
gi|32480856|ref|NP_862767.1| cytochrome f [Calycanthus
floridus var. glaucus]
Length = 320
Score = 239 bits (610), Expect = 1e-62
Identities = 112/134 (83%), Positives = 126/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP DRISPE+KEKMGNLSFQSYRP K+NILVVGPV
Sbjct: 94 QVLANGKKGALNVGAVLILPEGFELAPPDRISPELKEKMGNLSFQSYRPNKRNILVVGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEI FPILSPDPAT +DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT +GI
Sbjct: 154 PGQKYSEIVFPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGI 213
Query: 133 INKIIRKDKGGIHL 146
+++I+RK+KGG +
Sbjct: 214 VSRIVRKEKGGYEI 227
>emb|CAC88057.1| cytochrome f [Atropa belladonna] gi|28261730|ref|NP_783245.1|
cytochrome f [Atropa belladonna]
gi|27734235|sp|Q8S8W4|CYF_ATRBE Apocytochrome f
precursor
Length = 320
Score = 239 bits (610), Expect = 1e-62
Identities = 112/134 (83%), Positives = 127/134 (94%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+G LNVGAVLILPEGFELAP+DRISPE+KEK+GNLSFQSYRP KKNILV+GPV
Sbjct: 94 QVLANGKKGGLNVGAVLILPEGFELAPSDRISPEMKEKIGNLSFQSYRPNKKNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PG+KYSEITFPILSPDPAT +DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT +GI
Sbjct: 154 PGKKYSEITFPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGI 213
Query: 133 INKIIRKDKGGIHL 146
++KIIRK+KGG +
Sbjct: 214 VSKIIRKEKGGYEI 227
>sp|P49161|CYF_SOYBN Apocytochrome f precursor gi|984315|gb|AAA80649.1| cytochrome f
precursor
Length = 320
Score = 239 bits (609), Expect = 1e-62
Identities = 114/134 (85%), Positives = 125/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP DRISPEIKEK+GNLSFQ+YRPTKKNILVVGPV
Sbjct: 94 QVLANGKKGALNVGAVLILPEGFELAPPDRISPEIKEKIGNLSFQNYRPTKKNILVVGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKY EITFPILSPDP T RDV+FLKYPIYVGGNRGRGQIY DGSKSNNNVYNAT +G+
Sbjct: 154 PGQKYKEITFPILSPDPTTKRDVHFLKYPIYVGGNRGRGQIYLDGSKSNNNVYNATAAGM 213
Query: 133 INKIIRKDKGGIHL 146
+ KIIRK+KGG +
Sbjct: 214 VKKIIRKEKGGYEI 227
>emb|CAA27251.1| unnamed protein product [Oenothera elata subsp. hookeri]
Length = 318
Score = 237 bits (605), Expect = 4e-62
Identities = 112/134 (83%), Positives = 126/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+G LNVGAVLILPEGFELAP RISPE+KE++GN SFQSYRPTKKNILV+GPV
Sbjct: 92 QVLANGKKGGLNVGAVLILPEGFELAPPARISPEMKERIGNPSFQSYRPTKKNILVIGPV 151
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPILSPDPATN+DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT +GI
Sbjct: 152 PGQKYSEITFPILSPDPATNKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGI 211
Query: 133 INKIIRKDKGGIHL 146
++KIIRK+KGG +
Sbjct: 212 VSKIIRKEKGGYEI 225
>emb|CAB67170.1| cytochrome f [Oenothera elata subsp. hookeri]
gi|13518346|ref|NP_084705.1| cytochrome f [Oenothera
elata subsp. hookeri] gi|22261797|sp|P04658|CYF_OENHO
Apocytochrome f precursor
Length = 318
Score = 237 bits (605), Expect = 4e-62
Identities = 112/134 (83%), Positives = 126/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+G LNVGAVLILPEGFELAP RISPE+KE++GN SFQSYRPTKKNILV+GPV
Sbjct: 92 QVLANGKKGGLNVGAVLILPEGFELAPPARISPEMKERIGNPSFQSYRPTKKNILVIGPV 151
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPILSPDPATN+DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT +GI
Sbjct: 152 PGQKYSEITFPILSPDPATNKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGI 211
Query: 133 INKIIRKDKGGIHL 146
++KIIRK+KGG +
Sbjct: 212 VSKIIRKEKGGYEI 225
>emb|CAB88742.1| cytochrome f [Spinacia oleracea] gi|11497541|ref|NP_054949.1|
cytochrome f [Spinacia oleracea]
gi|19856343|sp|P16013|CYF_SPIOL Apocytochrome f
precursor
Length = 320
Score = 237 bits (604), Expect = 5e-62
Identities = 110/134 (82%), Positives = 125/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+G LNVGAVLILPEGFELAP DRISPE+KEKMGNLSFQSYRP K+NILV+GPV
Sbjct: 94 QVLANGKKGGLNVGAVLILPEGFELAPPDRISPEMKEKMGNLSFQSYRPNKQNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPIL+PDPAT +DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYN+T +GI
Sbjct: 154 PGQKYSEITFPILAPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNSTATGI 213
Query: 133 INKIIRKDKGGIHL 146
+ KI+RK+KGG +
Sbjct: 214 VKKIVRKEKGGYEI 227
>gb|AAA84632.1| apocytochrome f precursor
Length = 320
Score = 237 bits (604), Expect = 5e-62
Identities = 110/134 (82%), Positives = 125/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+G LNVGAVLILPEGFELAP DRISPE+KEKMGNLSFQSYRP K+NILV+GPV
Sbjct: 94 QVLANGKKGGLNVGAVLILPEGFELAPPDRISPEMKEKMGNLSFQSYRPNKQNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PGQKYSEITFPIL+PDPAT +DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYN+T +GI
Sbjct: 154 PGQKYSEITFPILAPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNSTATGI 213
Query: 133 INKIIRKDKGGIHL 146
+ KI+RK+KGG +
Sbjct: 214 VKKIVRKEKGGYEI 227
>emb|CAA60298.1| cytochrome f [Zea mays] gi|11467204|ref|NP_043037.1| cytochrome f
[Zea mays] gi|1169170|sp|P46617|CYF_MAIZE Apocytochrome
f precursor
Length = 320
Score = 236 bits (602), Expect = 9e-62
Identities = 110/134 (82%), Positives = 124/134 (92%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+G LNVGAVLILPEGFELAP DRISPE+KEK+GNLSFQSYRP KKNILV+GPV
Sbjct: 94 QVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEKIGNLSFQSYRPNKKNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PG+KYSEI FPILSPDPAT +DV+FLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT +GI
Sbjct: 154 PGKKYSEIVFPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATSTGI 213
Query: 133 INKIIRKDKGGIHL 146
+ KI+RK+KGG +
Sbjct: 214 VKKILRKEKGGYEI 227
>gb|AAT44705.1| cytochrome f [Saccharum hybrid cultivar SP-80-3280]
gi|50812540|ref|YP_054643.1| cytochrome f [Saccharum
officinarum] gi|48478783|ref|YP_024391.1| cytochrome f
[Saccharum hybrid cultivar SP-80-3280]
gi|49659524|dbj|BAD27305.1| cytochrome f [Saccharum
officinarum]
Length = 320
Score = 235 bits (599), Expect = 2e-61
Identities = 109/134 (81%), Positives = 124/134 (92%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+G LNVGAVLILPEGFELAP DRISPE+KEK+GNLSFQSYRP KKNILV+GPV
Sbjct: 94 QVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEKIGNLSFQSYRPNKKNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PG+KYSEI FPILSPDPAT +DV+FLKYPIYVGGNRGRGQIYPDG+KSNN VYNAT +GI
Sbjct: 154 PGKKYSEIVFPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGTKSNNTVYNATSTGI 213
Query: 133 INKIIRKDKGGIHL 146
+ KI+RK+KGG +
Sbjct: 214 VKKILRKEKGGYEI 227
>gb|AAA85363.1| cytochrome f [Pisum sativum]
Length = 342
Score = 234 bits (597), Expect = 3e-61
Identities = 110/134 (82%), Positives = 125/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP R+SP+IKEK+GNLSFQSYRPTKKNILV+GPV
Sbjct: 116 QVLANGKKGALNVGAVLILPEGFELAPPHRLSPQIKEKIGNLSFQSYRPTKKNILVIGPV 175
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PG+KYSEITFPILSPDPAT RDV FLKYP+YVGGNRGRGQIYPDGSKSNNNV NAT +G+
Sbjct: 176 PGKKYSEITFPILSPDPATKRDVYFLKYPLYVGGNRGRGQIYPDGSKSNNNVSNATATGV 235
Query: 133 INKIIRKDKGGIHL 146
+ +IIRK+KGG +
Sbjct: 236 VKQIIRKEKGGYEI 249
>sp|P00155|CYF_PEA Apocytochrome f precursor
Length = 320
Score = 234 bits (597), Expect = 3e-61
Identities = 110/134 (82%), Positives = 125/134 (93%)
Query: 13 RILANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPV 72
++LANGK+GALNVGAVLILPEGFELAP R+SP+IKEK+GNLSFQSYRPTKKNILV+GPV
Sbjct: 94 QVLANGKKGALNVGAVLILPEGFELAPPHRLSPQIKEKIGNLSFQSYRPTKKNILVIGPV 153
Query: 73 PGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATKSGI 132
PG+KYSEITFPILSPDPAT RDV FLKYP+YVGGNRGRGQIYPDGSKSNNNV NAT +G+
Sbjct: 154 PGKKYSEITFPILSPDPATKRDVYFLKYPLYVGGNRGRGQIYPDGSKSNNNVSNATATGV 213
Query: 133 INKIIRKDKGGIHL 146
+ +IIRK+KGG +
Sbjct: 214 VKQIIRKEKGGYEI 227
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.141 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 276,317,224
Number of Sequences: 2540612
Number of extensions: 12641624
Number of successful extensions: 23701
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 23588
Number of HSP's gapped (non-prelim): 125
length of query: 146
length of database: 863,360,394
effective HSP length: 122
effective length of query: 24
effective length of database: 553,405,730
effective search space: 13281737520
effective search space used: 13281737520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0269b.11