BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0269a.4
(70 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO59435.1| putative developmental protein [Nicotiana bentham... 90 1e-17
gb|AAM62827.1| developmental protein, putative [Arabidopsis thal... 88 7e-17
pir||C86312 hypothetical protein F11A6.7 - Arabidopsis thaliana ... 88 7e-17
gb|AAM10235.1| similar to developmental protein DG1118 [Arabidop... 87 1e-16
gb|AAM61431.1| developmental protein, putative [Arabidopsis thal... 86 2e-16
gb|AAP15161.1| superal1 [Zea mays] 85 6e-16
dbj|BAD37367.1| development protein-like protein [Oryza sativa (... 82 3e-15
ref|XP_647634.1| developmental protein DG1118 [Dictyostelium dis... 63 2e-09
gb|AAR10172.1| similar to Drosophila melanogaster CG4108 [Drosop... 62 5e-09
ref|NP_649051.3| CG4108-PA [Drosophila melanogaster] gi|28380485... 62 5e-09
gb|AAQ97759.1| CHMP1.5 protein [Danio rerio] gi|41107676|gb|AAH6... 62 5e-09
gb|AAH65933.1| Chromatin modifying protein 1B [Homo sapiens] gi|... 58 6e-08
gb|AAG01449.1| CHMP1.5 [Homo sapiens] 58 6e-08
gb|AAH12733.2| CHMP1.5 protein [Homo sapiens] 58 6e-08
ref|XP_537337.1| PREDICTED: similar to CHMP1.5 protein [Canis fa... 58 6e-08
ref|XP_512019.1| PREDICTED: similar to Guanine nucleotide-bindin... 58 6e-08
gb|AAH02229.1| Chmp1b protein [Mus musculus] gi|13195618|ref|NP_... 58 7e-08
dbj|BAB29150.2| unnamed protein product [Mus musculus] 58 7e-08
ref|NP_001014904.1| hypothetical protein LOC512033 [Bos taurus] ... 57 1e-07
ref|XP_316550.2| ENSANGP00000010009 [Anopheles gambiae str. PEST... 57 1e-07
>gb|AAO59435.1| putative developmental protein [Nicotiana benthamiana]
Length = 203
Score = 90.1 bits (222), Expect = 1e-17
Identities = 46/69 (66%), Positives = 50/69 (71%)
Query: 1 MNRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMN 60
MN+IMEL+FTSK LQ + RKCEK EK EKLKVK EKGNM IY EN IRK +EQMN
Sbjct: 8 MNQIMELKFTSKSLQRQARKCEKDEKSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMN 67
Query: 61 YLHPSLYLD 69
YL S LD
Sbjct: 68 YLRLSSRLD 76
>gb|AAM62827.1| developmental protein, putative [Arabidopsis thaliana]
gi|26451738|dbj|BAC42964.1| unknown protein
[Arabidopsis thaliana] gi|15220819|ref|NP_173215.1|
SNF7 family protein [Arabidopsis thaliana]
Length = 203
Score = 87.8 bits (216), Expect = 7e-17
Identities = 44/69 (63%), Positives = 50/69 (71%)
Query: 1 MNRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMN 60
MN+I EL+FTSK LQ + RKCEK+E+ EKLKVK EKGNM IY EN IRK +EQMN
Sbjct: 8 MNQIFELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMN 67
Query: 61 YLHPSLYLD 69
YL S LD
Sbjct: 68 YLRLSSRLD 76
>pir||C86312 hypothetical protein F11A6.7 - Arabidopsis thaliana
gi|9802746|gb|AAF99815.1| Similar to developmental
protein [Arabidopsis thaliana]
Length = 222
Score = 87.8 bits (216), Expect = 7e-17
Identities = 44/69 (63%), Positives = 50/69 (71%)
Query: 1 MNRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMN 60
MN+I EL+FTSK LQ + RKCEK+E+ EKLKVK EKGNM IY EN IRK +EQMN
Sbjct: 8 MNQIFELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMN 67
Query: 61 YLHPSLYLD 69
YL S LD
Sbjct: 68 YLRLSSRLD 76
>gb|AAM10235.1| similar to developmental protein DG1118 [Arabidopsis thaliana]
gi|18410249|ref|NP_565053.1| SNF7 family protein
[Arabidopsis thaliana] gi|16648963|gb|AAL24333.1|
Highly similar to developmental protein DG1118
[Arabidopsis thaliana] gi|5903092|gb|AAD55650.1| Highly
similar to developmental protein DG1118 [Arabidopsis
thaliana] gi|25406243|pir||G96755 developmental protein
homolog DG1118 [imported] - Arabidopsis thaliana
Length = 203
Score = 87.0 bits (214), Expect = 1e-16
Identities = 43/69 (62%), Positives = 50/69 (72%)
Query: 1 MNRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMN 60
MN+I +L+FTSK LQ + RKCEK+EK EKLKVK EKGNM IY EN IRK +EQMN
Sbjct: 8 MNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMN 67
Query: 61 YLHPSLYLD 69
YL + LD
Sbjct: 68 YLRLASRLD 76
>gb|AAM61431.1| developmental protein, putative [Arabidopsis thaliana]
Length = 203
Score = 86.3 bits (212), Expect = 2e-16
Identities = 43/69 (62%), Positives = 49/69 (70%)
Query: 1 MNRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMN 60
MN+I +L+FTSK LQ + RKCEK+EK EKLKVK EKGNM IY EN IRK EQMN
Sbjct: 8 MNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRREQMN 67
Query: 61 YLHPSLYLD 69
YL + LD
Sbjct: 68 YLRLASRLD 76
>gb|AAP15161.1| superal1 [Zea mays]
Length = 204
Score = 84.7 bits (208), Expect = 6e-16
Identities = 42/69 (60%), Positives = 49/69 (70%)
Query: 1 MNRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMN 60
MN+I +L+FTSK LQ + RKCEK+EK +KLKVK EKGNM IY EN IRK TE MN
Sbjct: 8 MNQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIRKRTEHMN 67
Query: 61 YLHPSLYLD 69
YL + LD
Sbjct: 68 YLRLASRLD 76
>dbj|BAD37367.1| development protein-like protein [Oryza sativa (japonica
cultivar-group)] gi|29367557|gb|AAO72640.1| development
protein-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 205
Score = 82.4 bits (202), Expect = 3e-15
Identities = 41/69 (59%), Positives = 48/69 (69%)
Query: 1 MNRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMN 60
M +I +L+FTSK LQ + RKCEK+EK +KLKVK EKGNM IY EN IRK TE MN
Sbjct: 8 MTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIRKRTEHMN 67
Query: 61 YLHPSLYLD 69
YL + LD
Sbjct: 68 YLRLASRLD 76
>ref|XP_647634.1| developmental protein DG1118 [Dictyostelium discoideum]
gi|3789911|gb|AAC67541.1| developmental protein DG1118
[Dictyostelium discoideum] gi|60475214|gb|EAL73149.1|
developmental protein DG1118 [Dictyostelium discoideum]
Length = 192
Score = 63.2 bits (152), Expect = 2e-09
Identities = 27/68 (39%), Positives = 46/68 (66%)
Query: 2 NRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNY 61
N++ +L+FTSK L+++ +K E+ EK +K+K+K E+GNM IY +N IR+ + +NY
Sbjct: 3 NQLFQLKFTSKQLEKQSKKSEQSEKAQKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNY 62
Query: 62 LHPSLYLD 69
L + +D
Sbjct: 63 LRLASRID 70
>gb|AAR10172.1| similar to Drosophila melanogaster CG4108 [Drosophila yakuba]
Length = 163
Score = 61.6 bits (148), Expect = 5e-09
Identities = 29/66 (43%), Positives = 40/66 (59%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F K L+ +KCEK+EKLEK K K +KGNM I+ EN IR+ + +NYL
Sbjct: 5 LFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYLR 64
Query: 64 PSLYLD 69
S +D
Sbjct: 65 MSARVD 70
>ref|NP_649051.3| CG4108-PA [Drosophila melanogaster] gi|28380485|gb|AAF49241.2|
CG4108-PA [Drosophila melanogaster]
gi|16768254|gb|AAL28346.1| GH26351p [Drosophila
melanogaster]
Length = 203
Score = 61.6 bits (148), Expect = 5e-09
Identities = 29/66 (43%), Positives = 40/66 (59%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F K L+ +KCEK+EKLEK K K +KGNM I+ EN IR+ + +NYL
Sbjct: 10 LFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYLR 69
Query: 64 PSLYLD 69
S +D
Sbjct: 70 MSARVD 75
>gb|AAQ97759.1| CHMP1.5 protein [Danio rerio] gi|41107676|gb|AAH65462.1| Similar
to RIKEN cDNA 2810405I11 gene [Danio rerio]
gi|45709052|gb|AAH67569.1| Similar to RIKEN cDNA
2810405I11 gene [Danio rerio]
gi|28277870|gb|AAH45934.1| Similar to RIKEN cDNA
2810405I11 gene [Danio rerio]
gi|41053363|ref|NP_956308.1| hypothetical protein
LOC336426 [Danio rerio]
Length = 199
Score = 61.6 bits (148), Expect = 5e-09
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F +K LQ +KC+K+EK EK+KVK +KGNM I+ EN IR+ + +N+L
Sbjct: 8 LFNLKFAAKELQRNSKKCDKEEKAEKVKVKKAIQKGNMEVARIHAENAIRQKNQSVNFLR 67
Query: 64 PSLYLD 69
S +D
Sbjct: 68 MSARVD 73
>gb|AAH65933.1| Chromatin modifying protein 1B [Homo sapiens]
gi|17933108|gb|AAL48200.1| C18orf2 [Homo sapiens]
gi|31542306|ref|NP_065145.2| chromatin modifying
protein 1B [Homo sapiens]
Length = 199
Score = 58.2 bits (139), Expect = 6e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F +K L +KC+K+EK EK K+K +KGNM I+ EN IR+ + +N+L
Sbjct: 8 LFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLR 67
Query: 64 PSLYLD 69
S +D
Sbjct: 68 MSARVD 73
>gb|AAG01449.1| CHMP1.5 [Homo sapiens]
Length = 196
Score = 58.2 bits (139), Expect = 6e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F +K L +KC+K+EK EK K+K +KGNM I+ EN IR+ + +N+L
Sbjct: 5 LFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLR 64
Query: 64 PSLYLD 69
S +D
Sbjct: 65 MSARVD 70
>gb|AAH12733.2| CHMP1.5 protein [Homo sapiens]
Length = 217
Score = 58.2 bits (139), Expect = 6e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F +K L +KC+K+EK EK K+K +KGNM I+ EN IR+ + +N+L
Sbjct: 26 LFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLR 85
Query: 64 PSLYLD 69
S +D
Sbjct: 86 MSARVD 91
>ref|XP_537337.1| PREDICTED: similar to CHMP1.5 protein [Canis familiaris]
Length = 390
Score = 58.2 bits (139), Expect = 6e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F +K L +KC+K+EK EK K+K +KGNM I+ EN IR+ + +N+L
Sbjct: 199 LFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLR 258
Query: 64 PSLYLD 69
S +D
Sbjct: 259 MSARVD 264
>ref|XP_512019.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) [Pan troglodytes]
Length = 1714
Score = 58.2 bits (139), Expect = 6e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F +K L +KC+K+EK EK K+K +KGNM I+ EN IR+ + +N+L
Sbjct: 1225 LFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLR 1284
Query: 64 PSLYLD 69
S +D
Sbjct: 1285 MSARVD 1290
>gb|AAH02229.1| Chmp1b protein [Mus musculus] gi|13195618|ref|NP_077152.1|
chromatin modifying protein 1B [Mus musculus]
Length = 199
Score = 57.8 bits (138), Expect = 7e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F +K L +KC+K+EK EK K+K +KGNM I+ EN IR+ + +N+L
Sbjct: 8 LFNLKFAAKELNRSSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQGVNFLR 67
Query: 64 PSLYLD 69
S +D
Sbjct: 68 MSARVD 73
>dbj|BAB29150.2| unnamed protein product [Mus musculus]
Length = 199
Score = 57.8 bits (138), Expect = 7e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F +K L +KC+K+EK EK K+K +KGNM I+ EN IR+ + +N+L
Sbjct: 8 LFNLKFAAKELNRSSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQGVNFLR 67
Query: 64 PSLYLD 69
S +D
Sbjct: 68 MSARVD 73
>ref|NP_001014904.1| hypothetical protein LOC512033 [Bos taurus]
gi|59858417|gb|AAX09043.1| CHMP1.5 protein [Bos taurus]
Length = 199
Score = 57.4 bits (137), Expect = 1e-07
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F +K L +KC+K+EK EK K+K +KGNM I+ EN IR+ + +N+L
Sbjct: 8 LFNLKFAAKELGRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLR 67
Query: 64 PSLYLD 69
S +D
Sbjct: 68 MSARVD 73
>ref|XP_316550.2| ENSANGP00000010009 [Anopheles gambiae str. PEST]
gi|55239290|gb|EAA11406.2| ENSANGP00000010009
[Anopheles gambiae str. PEST]
Length = 202
Score = 57.0 bits (136), Expect = 1e-07
Identities = 27/66 (40%), Positives = 39/66 (58%)
Query: 4 IMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLH 63
+ L+F K L+ +KCEK+EK E LK K +KGN I+ EN IR+ ++ +NYL
Sbjct: 9 LFNLKFAVKELERNAKKCEKEEKAEILKTKKAIQKGNTEVARIHAENAIRQKSQSLNYLR 68
Query: 64 PSLYLD 69
S +D
Sbjct: 69 MSARVD 74
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,026,256
Number of Sequences: 2540612
Number of extensions: 3839844
Number of successful extensions: 14184
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 14119
Number of HSP's gapped (non-prelim): 78
length of query: 70
length of database: 863,360,394
effective HSP length: 46
effective length of query: 24
effective length of database: 746,492,242
effective search space: 17915813808
effective search space used: 17915813808
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0269a.4