BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0266.9
(111 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM91750.1| unknown protein [Arabidopsis thaliana] gi|1934771... 149 2e-35
ref|NP_974404.1| glycosyl transferase family 29 protein / sialyl... 135 2e-31
ref|XP_506687.1| PREDICTED OJ1217_F02.7 gene product [Oryza sati... 124 4e-28
emb|CAB87910.1| putative protein [Arabidopsis thaliana] gi|11358... 98 4e-20
gb|AAM70516.1| At1g08660/F22O13_14 [Arabidopsis thaliana] gi|173... 60 1e-08
ref|NP_172342.3| glycosyl transferase family 29 protein / sialyl... 60 1e-08
pir||T00720 hypothetical protein F22O13.15 - Arabidopsis thaliana 45 3e-04
emb|CAG79192.1| unnamed protein product [Yarrowia lipolytica CLI... 36 0.26
gb|AAF99778.1| F22O13.14 [Arabidopsis thaliana] 34 0.97
ref|NP_268370.1| transcription regulator [Lactococcus lactis sub... 33 1.3
gb|AAH93104.1| Fbxo5 protein [Danio rerio] 32 3.7
gb|AAW41075.1| conserved hypothetical protein [Cryptococcus neof... 32 3.7
gb|EAL23212.1| hypothetical protein CNBA5560 [Cryptococcus neofo... 32 3.7
ref|ZP_00328839.1| COG0612: Predicted Zn-dependent peptidases [T... 32 3.7
ref|ZP_00314672.1| COG0006: Xaa-Pro aminopeptidase [Microbulbife... 31 8.2
ref|XP_542207.1| PREDICTED: similar to KIAA0963 protein [Canis f... 31 8.2
>gb|AAM91750.1| unknown protein [Arabidopsis thaliana] gi|19347711|gb|AAL85966.1|
unknown protein [Arabidopsis thaliana]
gi|30693090|ref|NP_190451.2| glycosyl transferase family
29 protein / sialyltransferase family protein
[Arabidopsis thaliana]
Length = 440
Score = 149 bits (376), Expect = 2e-35
Identities = 71/111 (63%), Positives = 90/111 (80%), Gaps = 2/111 (1%)
Query: 1 MRVLQLGLLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANG 60
M++L L LLAL +G +A+ IYIIG+S+ +Y + T+ED +AL SL N FQKCVSANG
Sbjct: 1 MKLLHLIFLLALTTGISAVLIYIIGVSN--LYESNRFTNEDLEALQSLQNGFQKCVSANG 58
Query: 61 LGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWE 111
LGL+AAM DYC+ +INFP DT+PKWKDPK+GELE LS++F+LCEAVATWE
Sbjct: 59 LGLQAAMGRDYCKVSINFPKDTVPKWKDPKSGELEGLSYEFDLCEAVATWE 109
>ref|NP_974404.1| glycosyl transferase family 29 protein / sialyltransferase family
protein [Arabidopsis thaliana]
Length = 431
Score = 135 bits (341), Expect = 2e-31
Identities = 67/111 (60%), Positives = 84/111 (75%), Gaps = 11/111 (9%)
Query: 1 MRVLQLGLLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANG 60
M++L L LLAL +G +A+ IYIIG+S+ + +AL SL N FQKCVSANG
Sbjct: 1 MKLLHLIFLLALTTGISAVLIYIIGVSNLYL-----------EALQSLQNGFQKCVSANG 49
Query: 61 LGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWE 111
LGL+AAM DYC+ +INFP DT+PKWKDPK+GELE LS++F+LCEAVATWE
Sbjct: 50 LGLQAAMGRDYCKVSINFPKDTVPKWKDPKSGELEGLSYEFDLCEAVATWE 100
>ref|XP_506687.1| PREDICTED OJ1217_F02.7 gene product [Oryza sativa (japonica
cultivar-group)] gi|50904809|ref|XP_463893.1|
sialyltransferase-like protein [Oryza sativa (japonica
cultivar-group)] gi|41053248|dbj|BAD07616.1|
sialyltransferase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 439
Score = 124 bits (312), Expect = 4e-28
Identities = 64/111 (57%), Positives = 75/111 (66%), Gaps = 3/111 (2%)
Query: 1 MRVLQLGLLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANG 60
MRVL L L A+ SG AI +Y+ GLS Y ++D D AL +L + F KCV ANG
Sbjct: 1 MRVLPLALAAAIFSGVTAILVYLSGLSS---YGGARVSDADLAALGALQSGFSKCVDANG 57
Query: 61 LGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWE 111
LGLKA DYC+ I +PSDT KWKDPKTGE E LSF+FNLCEAVA+WE
Sbjct: 58 LGLKAIPGEDYCRVVIQYPSDTDSKWKDPKTGEPEGLSFEFNLCEAVASWE 108
>emb|CAB87910.1| putative protein [Arabidopsis thaliana] gi|11358186|pir||T49278
hypothetical protein T21J18.90 - Arabidopsis thaliana
Length = 470
Score = 98.2 bits (243), Expect = 4e-20
Identities = 53/104 (50%), Positives = 63/104 (59%), Gaps = 30/104 (28%)
Query: 38 TDEDTQALLSLHNTFQKC----VSANGLGLKAAMSSDYCQTTINFPSDTIPKW------- 86
T+ED +AL SL N FQK SANGLGL+AAM DYC+ +INFP DT+PKW
Sbjct: 19 TNEDLEALQSLQNGFQKTDLMMQSANGLGLQAAMGRDYCKVSINFPKDTVPKWLVIILVL 78
Query: 87 -------------------KDPKTGELEALSFDFNLCEAVATWE 111
KDPK+GELE LS++F+LCEAVATWE
Sbjct: 79 VSSKYGLPYYYVLDYVQQQKDPKSGELEGLSYEFDLCEAVATWE 122
>gb|AAM70516.1| At1g08660/F22O13_14 [Arabidopsis thaliana]
gi|17381247|gb|AAL36042.1| At1g08660/F22O13_14
[Arabidopsis thaliana] gi|30680753|ref|NP_850940.1|
glycosyl transferase family 29 protein /
sialyltransferase family protein [Arabidopsis thaliana]
Length = 474
Score = 60.1 bits (144), Expect = 1e-08
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 9 LLALASGFAAISIYIIGLSDPSVYPTYHLTD---EDTQALLSLHNTFQKCVSANGLGLKA 65
LL L A S+++ + D ED Q L ++ Q+CV+ GLGL A
Sbjct: 12 LLQLLGCVAVFSVFVFTIQSSFFADNNRKLDLQPEDIQILSDFQSSVQQCVANRGLGLSA 71
Query: 66 AMSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWE 111
+ D+C + FP T W + + EAL F +N+CEAV WE
Sbjct: 72 HII-DHCNLILKFPEGTNSTWYNAQFKVFEALEFKYNVCEAVLLWE 116
>ref|NP_172342.3| glycosyl transferase family 29 protein / sialyltransferase family
protein [Arabidopsis thaliana]
Length = 347
Score = 60.1 bits (144), Expect = 1e-08
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 9 LLALASGFAAISIYIIGLSDPSVYPTYHLTD---EDTQALLSLHNTFQKCVSANGLGLKA 65
LL L A S+++ + D ED Q L ++ Q+CV+ GLGL A
Sbjct: 12 LLQLLGCVAVFSVFVFTIQSSFFADNNRKLDLQPEDIQILSDFQSSVQQCVANRGLGLSA 71
Query: 66 AMSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWE 111
+ D+C + FP T W + + EAL F +N+CEAV WE
Sbjct: 72 HII-DHCNLILKFPEGTNSTWYNAQFKVFEALEFKYNVCEAVLLWE 116
>pir||T00720 hypothetical protein F22O13.15 - Arabidopsis thaliana
Length = 425
Score = 45.4 bits (106), Expect = 3e-04
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 60 GLGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWE 111
GLGL A + D+C + FP T W + + EAL F +N+CEAV WE
Sbjct: 15 GLGLSAHII-DHCNLILKFPEGTNSTWYNAQFKVFEALEFKYNVCEAVLLWE 65
>emb|CAG79192.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50552402|ref|XP_503611.1| hypothetical protein
[Yarrowia lipolytica]
Length = 1015
Score = 35.8 bits (81), Expect = 0.26
Identities = 21/57 (36%), Positives = 26/57 (44%), Gaps = 6/57 (10%)
Query: 51 TFQKCVSANGLGLKAAMSSDYCQTTINFPSDT-----IPKWKDPKTGELEALSFDFN 102
TF++CV L + + D Q NFP D P W PK +AL FDFN
Sbjct: 664 TFKECVQWARLEFEKKFNGDISQLLYNFPKDATTSTGAPFWSGPKRAP-DALEFDFN 719
>gb|AAF99778.1| F22O13.14 [Arabidopsis thaliana]
Length = 444
Score = 33.9 bits (76), Expect = 0.97
Identities = 22/71 (30%), Positives = 29/71 (39%), Gaps = 20/71 (28%)
Query: 60 GLGLKAAMSSDYCQTTINFPSDTIPKWK-------------------DPKTGELEALSFD 100
GLGL A + D+C + FP T W + + EAL F
Sbjct: 15 GLGLSAHII-DHCNLILKFPEGTNSTWVCLHLSGFFLRFHWFYCDQYNAQFKVFEALEFK 73
Query: 101 FNLCEAVATWE 111
+N+CEAV WE
Sbjct: 74 YNVCEAVLLWE 84
>ref|NP_268370.1| transcription regulator [Lactococcus lactis subsp. lactis Il1403]
gi|12725279|gb|AAK06311.1| transcription regulator
[Lactococcus lactis subsp. lactis Il1403]
gi|25402165|pir||E86901 transcription regulator ywjD
[imported] - Lactococcus lactis subsp. lactis (strain
IL1403)
Length = 102
Score = 33.5 bits (75), Expect = 1.3
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 8 LLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQK 54
+L+ L F + Y++GLSD + T LT+E Q +L L N F++
Sbjct: 49 VLIQLCQTFDVSADYLLGLSDDKNFNTSTLTEEQLQIVLRLINEFEQ 95
>gb|AAH93104.1| Fbxo5 protein [Danio rerio]
Length = 347
Score = 32.0 bits (71), Expect = 3.7
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 25 GLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIP 84
GL++ S Y + H + D L SL + + CVS+ L ++ S+ C +NF +
Sbjct: 135 GLTEDSGYLSLHNSQVDVDGLDSLERSEENCVSSQSLDVEC--HSERCLPVLNFQEEAC- 191
Query: 85 KWKDPKTGELEALSFDFNLCEAVA 108
++ + + S+D+ + + VA
Sbjct: 192 --RELQRSYKKNRSYDWTVVDKVA 213
>gb|AAW41075.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21] gi|58258963|ref|XP_566894.1| conserved
hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 296
Score = 32.0 bits (71), Expect = 3.7
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 23 IIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDT 82
++G+ Y + + E TQ + +T ++A L L + +++ + P D
Sbjct: 195 LMGVGGDDDYFSADIPLEPTQPYVHSLSTSFGALTAPALALFSEKDAEWI---VARPEDL 251
Query: 83 IPKWKDPKTGELE-----ALSFDFN-------LCEAVATW 110
+PKW D G+LE S D N LCE V +W
Sbjct: 252 LPKWADAANGKLEWRIIKGASHDVNEKEAQAVLCEDVLSW 291
>gb|EAL23212.1| hypothetical protein CNBA5560 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 296
Score = 32.0 bits (71), Expect = 3.7
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 23 IIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDT 82
++G+ Y + + E TQ + +T ++A L L + +++ + P D
Sbjct: 195 LMGVGGDDDYFSADIPLEPTQPYVHSLSTSFGALTAPALALFSEKDAEWI---VARPEDL 251
Query: 83 IPKWKDPKTGELE-----ALSFDFN-------LCEAVATW 110
+PKW D G+LE S D N LCE V +W
Sbjct: 252 LPKWADAANGKLEWRIIKGASHDVNEKEAQAVLCEDVLSW 291
>ref|ZP_00328839.1| COG0612: Predicted Zn-dependent peptidases [Trichodesmium
erythraeum IMS101]
Length = 490
Score = 32.0 bits (71), Expect = 3.7
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 50 NTFQKCVS-ANGLGLKAAMSSDYCQTTINFPSDTIPKW 86
N F K V A G+GL AA S+DY Q + P++ + W
Sbjct: 139 NEFSKIVQQAGGVGLNAATSADYTQYFYSLPANKLELW 176
>ref|ZP_00314672.1| COG0006: Xaa-Pro aminopeptidase [Microbulbifer degradans 2-40]
Length = 434
Score = 30.8 bits (68), Expect = 8.2
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 25 GLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIP 84
G+SD T H+TDE ++ S+ F S NG+ AA + C + T P
Sbjct: 361 GISD-----TIHITDEGCESFFSMERDFTVKPSENGIAAIAAPQTASCVDLSTARNSTTP 415
Query: 85 KWKDPK 90
K K
Sbjct: 416 SKKTAK 421
>ref|XP_542207.1| PREDICTED: similar to KIAA0963 protein [Canis familiaris]
Length = 1728
Score = 30.8 bits (68), Expect = 8.2
Identities = 19/47 (40%), Positives = 24/47 (50%), Gaps = 3/47 (6%)
Query: 67 MSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEA--VATWE 111
++S C T PS T P + PKTG+ LS +C A VA WE
Sbjct: 74 IASQPCADTSYGPSTTTPSFL-PKTGDFPQLSLSSGVCGAGRVAVWE 119
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 183,213,479
Number of Sequences: 2540612
Number of extensions: 6197612
Number of successful extensions: 14648
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 14633
Number of HSP's gapped (non-prelim): 16
length of query: 111
length of database: 863,360,394
effective HSP length: 87
effective length of query: 24
effective length of database: 642,327,150
effective search space: 15415851600
effective search space used: 15415851600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0266.9