BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0262.8
(312 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR06309.1| hypothetical protein [Oryza sativa (japonica cult... 133 6e-30
ref|XP_471863.1| OSJNBb0033P05.11 [Oryza sativa (japonica cultiv... 127 5e-28
gb|AAP52540.1| hypothetical protein [Oryza sativa (japonica cult... 124 3e-27
ref|XP_475534.1| unknown protein [Oryza sativa (japonica cultiva... 124 3e-27
gb|AAC14510.1| En/Spm-like transposon protein [Arabidopsis thali... 124 5e-27
gb|AAX96370.1| transposon protein, putative, CACTA, En/Spm sub-c... 122 1e-26
ref|XP_469228.1| hypothetical protein [Oryza sativa (japonica cu... 121 3e-26
pir||C96640 hypothetical protein T25B24.14 [imported] - Arabidop... 118 3e-25
gb|AAW57796.1| hypothetical protein [Oryza sativa (japonica cult... 115 2e-24
emb|CAB81156.1| putative protein [Arabidopsis thaliana] gi|52621... 108 2e-22
emb|CAB72466.1| putative protein [Arabidopsis thaliana] gi|11358... 107 4e-22
emb|CAE04774.3| OSJNBa0079C19.15 [Oryza sativa (japonica cultiva... 107 4e-22
dbj|BAA97077.1| unnamed protein product [Arabidopsis thaliana] 106 1e-21
ref|NP_918569.1| P0516D04.26 [Oryza sativa (japonica cultivar-gr... 102 1e-20
dbj|BAB01019.1| unnamed protein product [Arabidopsis thaliana] 102 1e-20
gb|AAF34413.1| hypothetical protein [Oryza sativa] 102 2e-20
ref|XP_463214.1| hypothetical protein [Oryza sativa (japonica cu... 101 2e-20
emb|CAE04176.2| OSJNBa0029C04.7 [Oryza sativa (japonica cultivar... 101 3e-20
dbj|BAB01198.1| unnamed protein product [Arabidopsis thaliana] 101 3e-20
gb|AAP53885.1| putative glycine-rich RNA-binding protein [Oryza ... 100 5e-20
>gb|AAR06309.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50916453|ref|XP_468623.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 767
Score = 133 bits (335), Expect = 6e-30
Identities = 63/114 (55%), Positives = 78/114 (68%)
Query: 154 Y*HAIIFYCLGKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSL 213
Y H GKYYLVD+GYP G+L PYK +YHL ++R+ P G+ E FNY HSSL
Sbjct: 609 YTHVFPHSPTGKYYLVDSGYPNRPGYLAPYKGTKYHLQEYRDAPEPQGKEENFNYAHSSL 668
Query: 214 RNVIERSFGCCKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEFD 267
RNVIERSFG K KW++L +PSYD + Q +II AC ALHNFIR++ D+ FD
Sbjct: 669 RNVIERSFGVLKMKWRMLEKIPSYDPRKQTQIIIACCALHNFIRKSGIRDKHFD 722
>ref|XP_471863.1| OSJNBb0033P05.11 [Oryza sativa (japonica cultivar-group)]
gi|38569143|emb|CAE05672.3| OSJNBb0033P05.11 [Oryza
sativa (japonica cultivar-group)]
Length = 877
Score = 127 bits (318), Expect = 5e-28
Identities = 72/146 (49%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
Query: 163 LGKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFG 222
LGK+YLVD+GYP G+L PYK YH ++ GR E FNY HSS RNVIERSFG
Sbjct: 726 LGKFYLVDSGYPNRPGYLAPYKGITYHFHEYNESTLPRGRREHFNYCHSSCRNVIERSFG 785
Query: 223 CCKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEFD--ANYENEDGGGENE 280
K KW+IL S+PSY + Q++II AC+ALHNFIR + +D EFD + EN D G
Sbjct: 786 VLKNKWRILFSLPSYSQEKQSRIIHACIALHNFIRDSQMADTEFDNCDHDENYDPLG--- 842
Query: 281 AGPSTVTWEEPDFQSSLQMEQIREHI 306
G S+ + E + S M Q R+ I
Sbjct: 843 -GTSSPSSEPTNELDSRVMNQFRDWI 867
>gb|AAP52540.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|62733452|gb|AAX95569.1| Transposase family IS4,
putative [Oryza sativa (japonica cultivar-group)]
gi|37531902|ref|NP_920253.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|62733440|gb|AAX95557.1| Transposase family IS4,
putative [Oryza sativa (japonica cultivar-group)]
Length = 916
Score = 124 bits (312), Expect = 3e-27
Identities = 70/145 (48%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 164 GKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFGC 223
GK+YLVD+GYP G+L PYK YH ++ G+ E FNY HSS RNVIERSFG
Sbjct: 766 GKFYLVDSGYPNRPGYLAPYKGITYHFQEYNESTLPRGKREHFNYCHSSCRNVIERSFGV 825
Query: 224 CKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEFD--ANYENEDGGGENEA 281
K KW+IL S+PSY + Q++II AC+ALHNFIR + +D EFD + EN D G
Sbjct: 826 LKNKWRILFSLPSYSQEKQSRIIHACIALHNFIRDSQMADTEFDNCDHDENYDPLG---- 881
Query: 282 GPSTVTWEEPDFQSSLQMEQIREHI 306
G S+ + E + S M Q R+ I
Sbjct: 882 GTSSPSSEPTNELDSRVMNQFRDWI 906
>ref|XP_475534.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 868
Score = 124 bits (312), Expect = 3e-27
Identities = 70/145 (48%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 164 GKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFGC 223
GK+YLVD+GYP G+L PYK YH ++ G+ E FNY HSS RNVIERSFG
Sbjct: 718 GKFYLVDSGYPNRPGYLAPYKGITYHFQEYNESTLPRGKREHFNYCHSSCRNVIERSFGV 777
Query: 224 CKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEFD--ANYENEDGGGENEA 281
K KW+IL S+PSY + Q++II AC+ALHNFIR + +D EFD + EN D G
Sbjct: 778 LKNKWRILFSLPSYSQEKQSRIIHACIALHNFIRDSQMADTEFDNCDHDENYDPLG---- 833
Query: 282 GPSTVTWEEPDFQSSLQMEQIREHI 306
G S+ + E + S M Q R+ I
Sbjct: 834 GTSSPSSEPTNELDSRVMNQFRDWI 858
>gb|AAC14510.1| En/Spm-like transposon protein [Arabidopsis thaliana]
gi|7487888|pir||T00996 En/Spm-like transposon protein
[imported] - Arabidopsis thaliana
Length = 292
Score = 124 bits (310), Expect = 5e-27
Identities = 76/166 (45%), Positives = 96/166 (57%), Gaps = 22/166 (13%)
Query: 164 GKYYLVDAGYPTFMGFLGPYKKNRYHLPQF-RNGPRITGRVEVFNYYHSSLRNVIERSFG 222
GKYYLVD+GYPT G+LGP+++ RYHL QF R GP +T R E+FN HS LR+VIER+FG
Sbjct: 119 GKYYLVDSGYPTRTGYLGPHRRMRYHLGQFGRGGPPVTAR-ELFNRKHSGLRSVIERTFG 177
Query: 223 CCKAKWKILG-SMPSYDLKTQNKIITACMALHNFIRRNDRSDEEF------------DAN 269
KAKW+I+ P Y L KI+TA MALHNFIR + R D +F D
Sbjct: 178 VWKAKWRIVDRKHPKYGLAKWIKIVTATMALHNFIRDSHREDHDFLQWQSIEEYHVDDEE 237
Query: 270 YENEDGG-----GENEAGPSTVTWEEPDFQ--SSLQMEQIREHIKN 308
E E+ G GE E G E ++ ME +R++I N
Sbjct: 238 EEEEEEGEEEEEGEEEEGEGEEEEEHVAYEPTGDRAMEALRDNITN 283
>gb|AAX96370.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
(japonica cultivar-group)]
Length = 676
Score = 122 bits (307), Expect = 1e-26
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 164 GKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFGC 223
GK+YLVD+GYP G+L PYK YH ++ GR E FNY HSS RNVIERSFG
Sbjct: 526 GKFYLVDSGYPNRPGYLAPYKGITYHFQEYNESTLPRGRREHFNYCHSSCRNVIERSFGV 585
Query: 224 CKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEFD--ANYENEDGGGENEA 281
K KW+IL S+PSY + Q++II AC+ALH FIR + +D EFD + EN D G
Sbjct: 586 LKNKWRILFSLPSYSQEKQSRIIHACIALHYFIRDSQMADTEFDNCDHDENYDPLG---- 641
Query: 282 GPSTVTWEEPDFQSSLQMEQIREHI 306
G S+ + E + S M Q R+ I
Sbjct: 642 GTSSPSSEPTNELDSRVMNQFRDWI 666
>ref|XP_469228.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|29788843|gb|AAP03389.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 411
Score = 121 bits (303), Expect = 3e-26
Identities = 57/111 (51%), Positives = 71/111 (63%)
Query: 164 GKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFGC 223
GKYYLVDAGYP G+L PYK RYH+P+FR G +G E FN+ H S+R +IER FG
Sbjct: 257 GKYYLVDAGYPNRPGYLAPYKGQRYHVPEFRRGSAPSGVKEKFNFLHCSVRTIIERCFGV 316
Query: 224 CKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEFDANYENED 274
K KW++L MPS+ L Q ++ A MALHNFIR ++ D F N D
Sbjct: 317 WKMKWRVLLKMPSFPLWKQKMVVAATMALHNFIRDHNAPDRHFHRFERNPD 367
>pir||C96640 hypothetical protein T25B24.14 [imported] - Arabidopsis thaliana
gi|4585884|gb|AAD25557.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 404
Score = 118 bits (295), Expect = 3e-25
Identities = 61/121 (50%), Positives = 80/121 (65%), Gaps = 4/121 (3%)
Query: 164 GKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFGC 223
GKYYLVD+GYPT G+LGP+++ RYHL F G T E+FN HSSLR+VIER+FG
Sbjct: 252 GKYYLVDSGYPTRSGYLGPHRRTRYHLELFNRGGPPTNSRELFNRRHSSLRSVIERTFGV 311
Query: 224 CKAKWKILG-SMPSYDLKTQNKIITACMALHNFIRRNDRSDEEF---DANYENEDGGGEN 279
KAKW+IL P Y++K KI+T+ MALHN+IR + + D +F + E G EN
Sbjct: 312 WKAKWRILDRKHPKYEVKKWIKIVTSTMALHNYIRDSQQEDSDFRHWEIVESYEQHGDEN 371
Query: 280 E 280
+
Sbjct: 372 D 372
>gb|AAW57796.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 748
Score = 115 bits (288), Expect = 2e-24
Identities = 54/103 (52%), Positives = 67/103 (64%)
Query: 164 GKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFGC 223
GKYY+VDAG+P G+L PYK RYHLP++ G +E FN HSS+RNVIERSFG
Sbjct: 591 GKYYVVDAGHPNRPGYLAPYKGERYHLPEWHRGMEPNTPMEKFNRVHSSIRNVIERSFGL 650
Query: 224 CKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEF 266
K KW+IL MP Y + Q I+ A M LHN+IR + D +F
Sbjct: 651 LKMKWQILYKMPCYPIYKQKMIVVAAMVLHNYIREHGGEDPDF 693
>emb|CAB81156.1| putative protein [Arabidopsis thaliana] gi|5262193|emb|CAB45790.1|
putative protein [Arabidopsis thaliana]
gi|15236429|ref|NP_192560.1| hypothetical protein
[Arabidopsis thaliana] gi|7486873|pir||T10547
hypothetical protein T12G13.40 - Arabidopsis thaliana
Length = 202
Score = 108 bits (270), Expect = 2e-22
Identities = 57/144 (39%), Positives = 83/144 (57%)
Query: 163 LGKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFG 222
+ KYYLVD+GY G+L Y++++YH F+N E FN HSSLR V ER+F
Sbjct: 50 ISKYYLVDSGYGLHRGYLISYRQSQYHPSHFQNQAPPNNYKEKFNRLHSSLRLVTERTFR 109
Query: 223 CCKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEFDANYENEDGGGENEAG 282
K KWKI+ + YD++T K++ MALHNF+R+++ D +F+AN+E +D +
Sbjct: 110 VWKGKWKIMHNRARYDVRTTKKLVVETMALHNFVRKSNILDPDFEANWEQDDNHQPSLKE 169
Query: 283 PSTVTWEEPDFQSSLQMEQIREHI 306
V + F S ME IR+ I
Sbjct: 170 EVEVQDDGQIFDSRQYMEGIRDDI 193
>emb|CAB72466.1| putative protein [Arabidopsis thaliana] gi|11358076|pir||T47439
hypothetical protein T18B22.40 - Arabidopsis thaliana
Length = 377
Score = 107 bits (267), Expect = 4e-22
Identities = 64/149 (42%), Positives = 83/149 (54%), Gaps = 12/149 (8%)
Query: 164 GKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRN-GPRITGRVEVFNYYHSSLRNVIERSFG 222
GK+YLVD GY FL P+++ RYHL FR G + E+FN H+SLRNVIER FG
Sbjct: 221 GKFYLVDCGYANRRKFLAPFRRTRYHLQDFRGQGRDPKTQNELFNLRHASLRNVIERIFG 280
Query: 223 CCKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDE---EFDANYENEDGGGEN 279
K+++ I S P Y KTQ +++ AC LHNF+ + RSDE E N EN D EN
Sbjct: 281 IFKSRFLIFKSAPPYPFKTQTELVLACAGLHNFLHQECRSDEFPPETSINEENSDDNEEN 340
Query: 280 EAGPSTVTWEEPDFQSSLQMEQIREHIKN 308
+EE L+ +Q RE+ N
Sbjct: 341 -------NYEENGDVGILESQQ-REYANN 361
>emb|CAE04774.3| OSJNBa0079C19.15 [Oryza sativa (japonica cultivar-group)]
Length = 728
Score = 107 bits (267), Expect = 4e-22
Identities = 48/68 (70%), Positives = 56/68 (81%)
Query: 164 GKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFGC 223
GK+YLVD+GYP MGFL PYK +YHLP+FR GPR +G+ EVFN+ HSSLRNVIERSFG
Sbjct: 648 GKFYLVDSGYPNRMGFLAPYKGTKYHLPEFRAGPRPSGKKEVFNHLHSSLRNVIERSFGV 707
Query: 224 CKAKWKIL 231
K KW+IL
Sbjct: 708 LKMKWRIL 715
>dbj|BAA97077.1| unnamed protein product [Arabidopsis thaliana]
Length = 270
Score = 106 bits (264), Expect = 1e-21
Identities = 64/154 (41%), Positives = 84/154 (53%), Gaps = 16/154 (10%)
Query: 166 YYLVDAGYPTFMGFLGPYKKN-----RYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERS 220
YY+VD GYP GFL PY+ + RYH+ QF NGP + E+ N H+SLR+VIER+
Sbjct: 114 YYVVDYGYPNKQGFLAPYRSSQNGVVRYHMSQFYNGPPPRNKQELVNRCHASLRSVIERT 173
Query: 221 FGCCKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEF-----DANYENEDG 275
FG KW+IL P YD+ + +++ A M LHNFIR + DE+F D N N +
Sbjct: 174 FGVWMKKWRILCEFPRYDIDVKKRMVMATMGLHNFIRILNYFDEDFVEVMGDTNINNVN- 232
Query: 276 GGENEAGPSTVTWEEPDFQSSLQMEQIREHIKNM 309
EN+ +PD M IRE I NM
Sbjct: 233 -SENDL-DDMERGAKPD---GNHMANIRERIANM 261
>ref|NP_918569.1| P0516D04.26 [Oryza sativa (japonica cultivar-group)]
gi|21902106|dbj|BAC05653.1| OJ1005_B10.22 [Oryza sativa
(japonica cultivar-group)]
Length = 305
Score = 102 bits (255), Expect = 1e-20
Identities = 66/154 (42%), Positives = 86/154 (54%), Gaps = 10/154 (6%)
Query: 159 IFYCLGKYYLVDAGYPTFMGFLGPYKKNRYHLPQF--RNGPRITGRVEVFNYYHSSLRNV 216
I + G YYLVDAGY GFL PY+ RYHL +F RN PR E FN H+S RN+
Sbjct: 145 INHLAGCYYLVDAGYTNADGFLAPYRGQRYHLGRFTARNPPR--SAEEYFNMRHASARNI 202
Query: 217 IERSFGCCKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEFDANYENEDGG 276
+ERSFG K +W IL S + +KTQ +II AC LHN I + SD F+ E+ED
Sbjct: 203 VERSFGRLKGRWAILRSPSYFPIKTQCRIIMACALLHNLILQKMSSD-PFEDEDEDED-- 259
Query: 277 GENEAGPSTVTWE--EPDFQSSLQMEQIREHIKN 308
E+E + E EP+F S++ + +N
Sbjct: 260 -EDEIPLDILEGELAEPEFISAISTSDDWTNFRN 292
>dbj|BAB01019.1| unnamed protein product [Arabidopsis thaliana]
Length = 355
Score = 102 bits (255), Expect = 1e-20
Identities = 59/155 (38%), Positives = 86/155 (55%), Gaps = 16/155 (10%)
Query: 165 KYYLVDAGYPTFMGFLGPYKKN-----RYHLPQFRNGPRITGRVEVFNYYHSSLRNVIER 219
KYYLVD+GYP GFL Y+ + RYH+ QF GP + E+FN H+SLR+VIER
Sbjct: 184 KYYLVDSGYPNKQGFLALYRSSQNRVVRYHMSQFYFGPPPRNKHELFNQCHASLRSVIER 243
Query: 220 SFGCCKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEF-----DANYENED 274
+FG K KW+IL P Y++ Q +++ A + L+N IR ++ S+ +F +A N D
Sbjct: 244 TFGVWKKKWRILSDFPRYNVHVQKRVVMATVGLYNIIRISNFSNVDFVDVMTEAIINNRD 303
Query: 275 GGGENEAGPSTVTWEEPDFQSSLQMEQIREHIKNM 309
+ + E D M QI+++I NM
Sbjct: 304 FNHDLD------DIEATDIPDGEHMTQIKDNIANM 332
>gb|AAF34413.1| hypothetical protein [Oryza sativa]
Length = 809
Score = 102 bits (253), Expect = 2e-20
Identities = 57/109 (52%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 165 KYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRIT---GRVEVFNYYHSSLRNVIERSF 221
KY LVD+GYP+ MGFL PY + RYH QF+ GPR GR E FNY H+ LRN+IER F
Sbjct: 661 KYLLVDSGYPSRMGFLAPYPRVRYHKDQFK-GPRAPPPEGREEKFNYIHAKLRNIIERQF 719
Query: 222 GCCKAKWKILGSMPSYDLK-TQNKIITACMALHNFIRRNDRSDEEFDAN 269
G K +WKIL +P K Q+ II A LHNF R D +F AN
Sbjct: 720 GIVKKQWKILKGIPYNPYKNVQSNIILAAFCLHNF--RIDSKQNDFQAN 766
>ref|XP_463214.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|40737037|gb|AAR89050.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 693
Score = 101 bits (252), Expect = 2e-20
Identities = 57/109 (52%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 165 KYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRIT---GRVEVFNYYHSSLRNVIERSF 221
KY LVD+GYP+ MGFL PY + RYH QF+ GPR GR E FNY H+ LRN+IER F
Sbjct: 545 KYLLVDSGYPSRMGFLAPYPRVRYHKDQFK-GPRAPPPEGREEKFNYIHAKLRNIIERQF 603
Query: 222 GCCKAKWKILGSMPSYDLK-TQNKIITACMALHNFIRRNDRSDEEFDAN 269
G K +WKIL +P K Q+ II A LHNF R D +F AN
Sbjct: 604 GIVKKQWKILKGIPYNPYKNVQSDIILAAFCLHNF--RIDSKQNDFQAN 650
>emb|CAE04176.2| OSJNBa0029C04.7 [Oryza sativa (japonica cultivar-group)]
Length = 758
Score = 101 bits (251), Expect = 3e-20
Identities = 55/108 (50%), Positives = 66/108 (60%), Gaps = 5/108 (4%)
Query: 165 KYYLVDAGYPTFMGFLGPYKKNRYHLPQFR--NGPRITGRVEVFNYYHSSLRNVIERSFG 222
KY LVD+GYP+ MGFL PY + RYH QF+ + P GR E FNY H+ LRN+IER FG
Sbjct: 610 KYLLVDSGYPSRMGFLAPYPRVRYHKDQFKGPHAPPPEGREEKFNYIHAKLRNIIERQFG 669
Query: 223 CCKAKWKILGSMPSYDLK-TQNKIITACMALHNFIRRNDRSDEEFDAN 269
K +WKIL +P K Q+ II A LHNF R D +F AN
Sbjct: 670 IVKKQWKILKGIPYNPYKNVQSDIILAAFCLHNF--RIDSKQNDFQAN 715
>dbj|BAB01198.1| unnamed protein product [Arabidopsis thaliana]
Length = 329
Score = 101 bits (251), Expect = 3e-20
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 163 LGKYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRITGRVEVFNYYHSSLRNVIERSFG 222
+GKYYLVD+GY G+LGP+++ YH QF+N E FN+ HS LR VIER+FG
Sbjct: 178 IGKYYLVDSGYALRRGYLGPFRQTWYHHNQFQNQAPPNNHKEKFNWRHSLLRCVIERTFG 237
Query: 223 CCKAKWKILGSMPSYDLKTQNKIITACMALHNFIRRNDRSDEEFDANYENEDGGGENEAG 282
K KW+I+ Y++ T KI+ A MALHNF+ + D +FD ++ +D
Sbjct: 238 VWKGKWRIMQDRAWYNIVTTRKIMVATMALHNFVWKLGIPDLDFDIDW-MQDNDHHPTLD 296
Query: 283 PSTVTWEEPDFQSSLQMEQIREHI 306
T E+ S ME R+ I
Sbjct: 297 DEDETVEQDMTGSRQHMEGFRDEI 320
>gb|AAP53885.1| putative glycine-rich RNA-binding protein [Oryza sativa (japonica
cultivar-group)] gi|37534592|ref|NP_921598.1| putative
glycine-rich RNA-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 777
Score = 100 bits (249), Expect = 5e-20
Identities = 56/109 (51%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 165 KYYLVDAGYPTFMGFLGPYKKNRYHLPQFRNGPRIT---GRVEVFNYYHSSLRNVIERSF 221
KY LVD+GYP+ MGFL PY + RYH QF+ GPR GR E FNY H+ LRN+IER F
Sbjct: 629 KYLLVDSGYPSRMGFLAPYPRVRYHKDQFK-GPRAPPPEGREEKFNYIHAKLRNIIERQF 687
Query: 222 GCCKAKWKILGSMPSYDLK-TQNKIITACMALHNFIRRNDRSDEEFDAN 269
G K +WKIL +P K Q+ II A LHNF R D ++ AN
Sbjct: 688 GIVKKQWKILKGIPYNPYKNVQSDIILAAFCLHNF--RIDSKQNDYQAN 734
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.342 0.152 0.496
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 502,280,238
Number of Sequences: 2540612
Number of extensions: 20323885
Number of successful extensions: 63428
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 63215
Number of HSP's gapped (non-prelim): 161
length of query: 312
length of database: 863,360,394
effective HSP length: 128
effective length of query: 184
effective length of database: 538,162,058
effective search space: 99021818672
effective search space used: 99021818672
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0262.8