BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0258b.1
(207 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE45586.1| hypothetical protein [Lotus corniculatus var. ja... 413 e-114
dbj|BAB10714.1| zinc finger protein SHI-like [Arabidopsis thalia... 142 6e-33
gb|AAD31354.1| unknown protein [Arabidopsis thaliana] gi|1522411... 140 3e-32
gb|AAD23685.1| hypothetical protein [Arabidopsis thaliana] gi|25... 136 4e-31
gb|AAV68856.1| hypothetical protein AT1G75520 [Arabidopsis thali... 133 4e-30
dbj|BAD46263.1| putative LRP1 [Oryza sativa (japonica cultivar-g... 126 3e-28
gb|AAN85201.1| hypothetical protein [Arabidopsis thaliana] 123 3e-27
gb|AAV68825.1| hypothetical protein AT1G19790 [Arabidopsis thali... 123 4e-27
ref|XP_483648.1| putative lateral root primordia (LRP1) [Oryza s... 123 4e-27
emb|CAB80297.1| putative protein [Arabidopsis thaliana] gi|29613... 123 4e-27
gb|AAX53173.1| putative zinc finger protein [Physcomitrella patens] 116 3e-25
ref|NP_914676.1| putative LRP(lateral root primordia) 1 [Oryza s... 115 1e-24
gb|AAV31329.1| hypothetical protein [Oryza sativa (japonica cult... 114 1e-24
emb|CAC42894.1| lateral root primordia (LRP1) [Arabidopsis thali... 111 1e-23
gb|AAA87790.1| LRP1 110 2e-23
emb|CAB62628.1| putative protein [Arabidopsis thaliana] gi|15230... 92 1e-17
emb|CAB81808.1| putative protein [Arabidopsis thaliana] gi|17386... 87 3e-16
ref|NP_198306.1| zinc finger protein-related [Arabidopsis thaliana] 85 1e-15
dbj|BAD54563.1| putative LRP1 [Oryza sativa (japonica cultivar-g... 80 5e-14
ref|NP_974772.1| lateral root primordium 1 (LRP1) [Arabidopsis t... 79 1e-13
>emb|CAE45586.1| hypothetical protein [Lotus corniculatus var. japonicus]
Length = 246
Score = 413 bits (1062), Expect = e-114
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MSMMLGQEVKGSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLM 60
MSMMLGQEVKGSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLM
Sbjct: 1 MSMMLGQEVKGSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLM 60
Query: 61 EHQPPPTTNNPHHLHEDIPQSHNQNPFTSLEELKFPEAMSSMAVFSSVRVRSMDDSVNEM 120
EHQPPPTTNNPHHLHEDIPQSHNQNPFTSLEELKFPEAMSSMAVFSSVRVRSMDDSVNEM
Sbjct: 61 EHQPPPTTNNPHHLHEDIPQSHNQNPFTSLEELKFPEAMSSMAVFSSVRVRSMDDSVNEM 120
Query: 121 AYQTSVNIGGHRFSGILYDQGPEQQSLNASPLDQHQNLNLTTIHSHDGATMAPPSSSATA 180
AYQTSVNIGGHRFSGILYDQGPEQQSLNASPLDQHQNLNLTTIHSHDGATMAPPSSSATA
Sbjct: 121 AYQTSVNIGGHRFSGILYDQGPEQQSLNASPLDQHQNLNLTTIHSHDGATMAPPSSSATA 180
Query: 181 AHELFFPQPRSLASFR 196
AHELFFPQPRSLASFR
Sbjct: 181 AHELFFPQPRSLASFR 196
>dbj|BAB10714.1| zinc finger protein SHI-like [Arabidopsis thaliana]
gi|15239350|ref|NP_201436.1| zinc finger protein,
putative (SHI) [Arabidopsis thaliana]
gi|4929803|gb|AAD34162.1| putative zinc finger protein
SHI [Arabidopsis thaliana]
Length = 331
Score = 142 bits (358), Expect = 6e-33
Identities = 87/234 (37%), Positives = 123/234 (52%), Gaps = 38/234 (16%)
Query: 1 MSMMLGQEVKGSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLM 60
M M G G CQ+CGNQ+KK C++ RCRTCC ++G C THV+STW+P +RR R
Sbjct: 107 MMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRER-- 164
Query: 61 EHQPPPTTNNPHHLHEDIPQSHNQ----------------NPFTSLEELKFPEAMSSMAV 104
Q T P L +P+ + N + LE FP +SS AV
Sbjct: 165 -QQQLSTGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAV 223
Query: 105 FSSVRVRSMDDSVNEMAYQTSVNIGGHRFSGILYDQGPEQQSLNASPLDQHQNLNLTTIH 164
F VRV S+DD E AY+T+V+IGGH F G+LYDQGP ++S + Q LNL T
Sbjct: 224 FRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGG---GSQPLNLIT-- 278
Query: 165 SHDGATMAPPSSS-------ATAAH-----ELFFPQPRSLASFRSGVPYFSHTK 206
+ A+ + P+ S +T+ H L +P P + +F +G +FS+++
Sbjct: 279 AGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTP--INTFMTGTHFFSNSR 330
>gb|AAD31354.1| unknown protein [Arabidopsis thaliana] gi|15224110|ref|NP_179404.1|
lateral root primordium (LRP) protein-related
[Arabidopsis thaliana] gi|25370585|pir||E84560
hypothetical protein At2g18120 [imported] - Arabidopsis
thaliana
Length = 222
Score = 140 bits (352), Expect = 3e-32
Identities = 68/144 (47%), Positives = 91/144 (62%), Gaps = 9/144 (6%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEHQPPPTTNNPHH 73
CQECGNQAKKGC + RCRTCC + G C THVRSTWIP+ +RR R + Q P T+NP
Sbjct: 72 CQECGNQAKKGCTHGRCRTCCKSNGLHCPTHVRSTWIPIAKRRERQQQLQTP--TSNPTG 129
Query: 74 LHEDIPQSHNQNPFTSLE-------ELKFPEAMSSMAVFSSVRVRSMDDSVNEMAYQTSV 126
+ + + N +L+ E +FP+ +SS A+F VR+ DD + AYQT+V
Sbjct: 130 GSGRVGKYRDINQHATLDSSGLEMGETRFPDEVSSDALFRCVRMSGTDDGEGQYAYQTTV 189
Query: 127 NIGGHRFSGILYDQGPEQQSLNAS 150
I GH F GILY+QGPE +S+ ++
Sbjct: 190 GIAGHLFKGILYNQGPENKSMRST 213
>gb|AAD23685.1| hypothetical protein [Arabidopsis thaliana] gi|25412036|pir||G84600
hypothetical protein At2g21400 [imported] - Arabidopsis
thaliana gi|15226540|ref|NP_179735.1| lateral root
primordium (LRP) protein-related [Arabidopsis thaliana]
Length = 174
Score = 136 bits (342), Expect = 4e-31
Identities = 72/170 (42%), Positives = 98/170 (57%), Gaps = 23/170 (13%)
Query: 9 VKGSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEHQPPPTT 68
+ G +C++CGNQAKK C Y RCRTCC +K F CQTH++STW+P RR H + Q P +T
Sbjct: 4 IMGRKCEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPAYRRSHHKHQSQ-PLST 62
Query: 69 NNPHHLHEDIPQSHNQNPFTSLEELKFPEAMSSMAVFSSVRVRSMDDSVNEMAYQTSVNI 128
+ P + H FP +SS+A F V+V S+DD + AYQT+VNI
Sbjct: 63 SIPKGVQIHTTPGH------------FPAELSSLADFRCVKVSSIDDGKEQYAYQTTVNI 110
Query: 129 GGHRFSGILYDQGPEQQSLNASPLDQHQNLNLTTIHSHDGATMAPPSSSA 178
GGH F GIL+DQG L+ +D H N N S++ + PS+S+
Sbjct: 111 GGHVFRGILHDQG-----LHKVMVDHHYNKN-----SNNHQELLTPSTSS 150
>gb|AAV68856.1| hypothetical protein AT1G75520 [Arabidopsis thaliana]
gi|60547683|gb|AAX23805.1| hypothetical protein
At1g75520 [Arabidopsis thaliana]
gi|15222285|ref|NP_177684.1| lateral root primordium
(LRP) protein-related [Arabidopsis thaliana]
gi|25404980|pir||F96785 protein F10A5.26 [imported] -
Arabidopsis thaliana gi|9369370|gb|AAF87119.1| F10A5.26
[Arabidopsis thaliana]
Length = 346
Score = 133 bits (334), Expect = 4e-30
Identities = 84/231 (36%), Positives = 116/231 (49%), Gaps = 48/231 (20%)
Query: 11 GSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRL-----MEHQPP 65
G CQ+CGNQAKK C + RCRTCC ++GF CQTHV+STW+P +RR RL ++H
Sbjct: 122 GMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHSA 181
Query: 66 PT--TNNPHHLHE------DIPQSH--------------NQNPFTSLE-ELKFPEAMSSM 102
+ T N L E + + H N N + LE P ++S
Sbjct: 182 SSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNSP 241
Query: 103 AVFSSVRVRSMDDSVNEM--AYQTSVNIGGHRFSGILYDQGPEQQ--------SLNASPL 152
A+F VRV S+++ ++ AYQT+VNIGGH F GILYDQGPE Q + A+
Sbjct: 242 AIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATTT 301
Query: 153 DQHQNLNLTTIHSHDGATMAPPSSSATAAHELFFPQPRSLASFRSGVPYFS 203
+ + T +++ M PSS P L SF +G P+F+
Sbjct: 302 NVEETATKTVTGNNNNGLMLDPSSL----------YPAQLNSFIAGTPFFT 342
>dbj|BAD46263.1| putative LRP1 [Oryza sativa (japonica cultivar-group)]
gi|52075936|dbj|BAD46016.1| putative LRP1 [Oryza sativa
(japonica cultivar-group)]
Length = 315
Score = 126 bits (317), Expect = 3e-28
Identities = 76/224 (33%), Positives = 105/224 (45%), Gaps = 29/224 (12%)
Query: 11 GSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLME--------- 61
G CQ+CGNQAKK C + RCRTCC ++GF C THV+STW+P +RR R +
Sbjct: 94 GISCQDCGNQAKKDCTHMRCRTCCKSRGFACATHVKSTWVPAAKRRERQQQLAALAASAA 153
Query: 62 ---------HQPPPTTNNPHHLHEDIPQSHNQNPFTSLEELKFPEAMSSMAVFSSVRVRS 112
P S +Q T E +FP +SS AVF VR+
Sbjct: 154 ATAGGAGPSRDPTKRPRARPSATTPTTSSGDQQMVTVAE--RFPREVSSEAVFRCVRLGP 211
Query: 113 MDDSVNEMAYQTSVNIGGHRFSGILYDQGPEQQSLNASPLDQHQNLNLTTIHSHDGATMA 172
+D + E+AYQT+V+IGGH F GIL+D GPE ++ + LT S A
Sbjct: 212 VDQAEAEVAYQTAVSIGGHVFKGILHDVGPEALAVAGGGGASEYHFRLTGDGSSPSTAAA 271
Query: 173 PPSSSATAAHELF--------FPQPRSLASFRSGVPYF-SHTKP 207
+ S + + +P P +F +G P+F H +P
Sbjct: 272 GEAGSGGGGNIIVSSAVVMDPYPTPGPYGAFPAGTPFFHGHPRP 315
>gb|AAN85201.1| hypothetical protein [Arabidopsis thaliana]
Length = 162
Score = 123 bits (309), Expect = 3e-27
Identities = 69/161 (42%), Positives = 90/161 (55%), Gaps = 23/161 (14%)
Query: 18 GNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEHQPPPTTNNPHHLHED 77
GNQAKK C Y RCRTCC +K F CQTH+ STW+P RR H + Q P +T+ P +
Sbjct: 1 GNQAKKDCVYMRCRTCCKSKAFHCQTHIESTWVPAYRRSHHKHQSQ-PLSTSIPKGVQIH 59
Query: 78 IPQSHNQNPFTSLEELKFPEAMSSMAVFSSVRVRSMDDSVNEMAYQTSVNIGGHRFSGIL 137
H FP +SS+A F V+V S+DD + AYQT+VNIGGH F GIL
Sbjct: 60 TTPGH------------FPAELSSLADFRCVKVSSIDDGKEQYAYQTTVNIGGHVFRGIL 107
Query: 138 YDQGPEQQSLNASPLDQHQNLNLTTIHSHDGATMAPPSSSA 178
+DQG L+ +D H N N S++ + PS+S+
Sbjct: 108 HDQG-----LHKVMVDHHYNKN-----SNNHQELLTPSTSS 138
>gb|AAV68825.1| hypothetical protein AT1G19790 [Arabidopsis thaliana]
Length = 345
Score = 123 bits (308), Expect = 4e-27
Identities = 83/235 (35%), Positives = 112/235 (47%), Gaps = 51/235 (21%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEHQPPPT-----T 68
CQ+CGNQAKK C + RCRTCC ++GF CQTHV+STW+ +RR R + P
Sbjct: 119 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDA 178
Query: 69 NNPHHLHEDIPQSHNQN------------------PFTSLEELKFPEAMSSMAVFSSVRV 110
N+ +D ++ + LE P +SS AVF +RV
Sbjct: 179 NSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRCMRV 238
Query: 111 RSMDDSVNEMAYQTSVNIGGHRFSGILYDQGPE------QQSLNASPLDQHQNLNL---- 160
S+DD E AYQT+V+IGGH F G LYDQGP SLN QH +LNL
Sbjct: 239 SSIDDEDEEYAYQTAVSIGGHVFKGXLYDQGPSSDHHRYSSSLNGETSHQH-HLNLMDST 297
Query: 161 ---------TTIHSHDGATMAPPSSSATAAHELFFPQPRSLASFRSGVPYFSHTK 206
T +++++G+ PSS TA F A G P+F+ ++
Sbjct: 298 PSAATTNAVTAVNTNNGS--IDPSSLYTAVATPF------NAFVAGGTPFFASSR 344
>ref|XP_483648.1| putative lateral root primordia (LRP1) [Oryza sativa (japonica
cultivar-group)] gi|42408721|dbj|BAD09939.1| putative
lateral root primordia (LRP1) [Oryza sativa (japonica
cultivar-group)] gi|42407540|dbj|BAD10745.1| putative
lateral root primordia (LRP1) [Oryza sativa (japonica
cultivar-group)]
Length = 324
Score = 123 bits (308), Expect = 4e-27
Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 9/140 (6%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEHQPPPTTNNPHH 73
CQ+CGNQAKK C + RCRTCC ++GF C THV+STW+P +RR R ++ +
Sbjct: 116 CQDCGNQAKKDCTHLRCRTCCKSRGFDCATHVKSTWVPAAKRRER--QNLLASAAESSKR 173
Query: 74 LHEDIPQSHNQNPFTSLEEL-------KFPEAMSSMAVFSSVRVRSMDDSVNEMAYQTSV 126
+ + + P TS E +FP +SS AVF VR+ ++++ E+AYQT+V
Sbjct: 174 PRDSAAAATSTTPTTSSGEQQQMMVGERFPREVSSEAVFRCVRLGPVEEADAEVAYQTTV 233
Query: 127 NIGGHRFSGILYDQGPEQQS 146
+IGGH F GIL+D GPE S
Sbjct: 234 SIGGHVFKGILHDVGPEHSS 253
>emb|CAB80297.1| putative protein [Arabidopsis thaliana] gi|2961385|emb|CAA18132.1|
putative protein [Arabidopsis thaliana]
gi|15234365|ref|NP_195349.1| zinc finger protein-related
[Arabidopsis thaliana] gi|7486031|pir||T04595
hypothetical protein F23E13.150 - Arabidopsis thaliana
Length = 322
Score = 123 bits (308), Expect = 4e-27
Identities = 65/158 (41%), Positives = 87/158 (54%), Gaps = 23/158 (14%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEHQPPPTTNN--- 70
C++CGNQAKK C + RCRTCC ++GF C THVRSTWIPV RRR R + +
Sbjct: 94 CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGS 153
Query: 71 -------------PHHLHEDIPQSHNQNPFTS------LEELKFPEAMSSMAVFSSVRVR 111
H +P + + + S + E FP +SS A+F V++
Sbjct: 154 GSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVKMS 213
Query: 112 SMDDSVN-EMAYQTSVNIGGHRFSGILYDQGPEQQSLN 148
+DD + + AYQT+VNIGGH F GILYDQGPE ++
Sbjct: 214 GVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSYMS 251
>gb|AAX53173.1| putative zinc finger protein [Physcomitrella patens]
Length = 289
Score = 116 bits (291), Expect = 3e-25
Identities = 65/172 (37%), Positives = 86/172 (49%), Gaps = 32/172 (18%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEH-------QPPP 66
CQECGNQAKK C++ RCRTCC ++ F C THV+STW+P +RR R QP P
Sbjct: 75 CQECGNQAKKDCSFQRCRTCCKSRDFDCATHVKSTWVPASKRRERQAAEAAAAAAGQPRP 134
Query: 67 ---------------------TTNNPHHLHEDIPQSHNQNPFTSLEELKFPEAMSSMAVF 105
TT+ DI H P L P + + A+F
Sbjct: 135 KSKRARTLALSVPAGATTSMTTTSANSPRGSDINSGHPSQPAQGRGGL--PPEVRAQALF 192
Query: 106 SSVRVRSMDDSVNEMAYQTSVNIGGHRFSGILYDQGPE--QQSLNASPLDQH 155
VRV ++D NE AYQ +V IGGH F G+LYDQG + ++ ++P + H
Sbjct: 193 KCVRVTGVEDGENECAYQATVKIGGHIFKGLLYDQGLDLAPPAVTSNPSELH 244
>ref|NP_914676.1| putative LRP(lateral root primordia) 1 [Oryza sativa (japonica
cultivar-group)] gi|20161862|dbj|BAB90775.1| putative
LRP1 [Oryza sativa (japonica cultivar-group)]
gi|15528818|dbj|BAB64713.1| putative LRP1 [Oryza sativa
(japonica cultivar-group)]
Length = 340
Score = 115 bits (287), Expect = 1e-24
Identities = 63/152 (41%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLM----EHQPPPT-- 67
CQ+CGNQAKK C + RCRTCC ++GF C THV+STW+P RRR R P T
Sbjct: 115 CQDCGNQAKKDCGHQRCRTCCKSRGFDCSTHVKSTWVPAARRRERQQLTGSASSSPATAS 174
Query: 68 ----TNNPHHLHEDIPQSHNQ----------NPFTSLEELKF----PEAMSSMAVFSSVR 109
+ P L SH + +S ++ F P + + AVF VR
Sbjct: 175 AAAASKKPRLLTSQTTTSHTSTSNATTPRSFDTTSSHQDASFRESLPRQVRAPAVFRCVR 234
Query: 110 VRSMDDSVNEMAYQTSVNIGGHRFSGILYDQG 141
V S+DD +E AYQ +V I GH F G LYDQG
Sbjct: 235 VTSIDDGEDEYAYQATVTINGHVFKGFLYDQG 266
>gb|AAV31329.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50511399|gb|AAT77322.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 453
Score = 114 bits (286), Expect = 1e-24
Identities = 61/160 (38%), Positives = 80/160 (49%), Gaps = 30/160 (18%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRH---------------- 57
C +CGNQAKK C + RCRTCC ++GF C THVRSTW+P RRR
Sbjct: 232 CHDCGNQAKKDCVHHRCRTCCKSRGFDCPTHVRSTWVPAARRRERQQLAGAASSPPTSSA 291
Query: 58 ------------RLMEHQPPPTTNNPHHLHEDIPQSHNQNPFTSLEELK--FPEAMSSMA 103
RL+ Q TT+ + P+S + + + + P + + A
Sbjct: 292 FPAATTASAKKPRLLGSQTTTTTSRTSTSNATTPRSFDTSSSHQVASFRDALPRHVRAPA 351
Query: 104 VFSSVRVRSMDDSVNEMAYQTSVNIGGHRFSGILYDQGPE 143
VF VRV S+DD +E AYQ +V I GH F G LYDQG +
Sbjct: 352 VFRCVRVTSVDDGDDEFAYQAAVTINGHMFRGFLYDQGAD 391
>emb|CAC42894.1| lateral root primordia (LRP1) [Arabidopsis thaliana]
gi|18416839|ref|NP_568266.1| lateral root primordium 1
(LRP1) [Arabidopsis thaliana]
gi|42573349|ref|NP_974771.1| lateral root primordium 1
(LRP1) [Arabidopsis thaliana] gi|58743288|gb|AAW81722.1|
At5g12330 [Arabidopsis thaliana]
Length = 320
Score = 111 bits (277), Expect = 1e-23
Identities = 68/191 (35%), Positives = 89/191 (45%), Gaps = 33/191 (17%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHR-LMEHQPPPT----- 67
CQ+CGNQAKK C RCRTCC ++GF C THV+STW+ RRR R +M PT
Sbjct: 112 CQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVMPTGANPTAGSSL 171
Query: 68 -----TNNPHHLHEDIPQSHNQNPFTSLEEL-------------------KFPEAMSSMA 103
T P + Q TS +P + + A
Sbjct: 172 STSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRAAA 231
Query: 104 VFSSVRVRSMDDSVNEMAYQTSVNIGGHRFSGILYDQGPEQQSLNASPLDQHQNLNLTTI 163
VF VRV +++D +E AYQ V IGGH F G LYDQG E + S D H +
Sbjct: 232 VFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSDLHLG---GSA 288
Query: 164 HSHDGATMAPP 174
++H+G + + P
Sbjct: 289 NNHNGVSASAP 299
>gb|AAA87790.1| LRP1
Length = 320
Score = 110 bits (276), Expect = 2e-23
Identities = 68/191 (35%), Positives = 89/191 (45%), Gaps = 33/191 (17%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHR-LMEHQPPPT----- 67
CQ+CGNQAKK C RCRTCC ++GF C THV+STW+ RRR R +M PT
Sbjct: 112 CQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVMPTGANPTAGSSL 171
Query: 68 -----TNNPHHLHEDIPQSHNQNPFTSLEEL-------------------KFPEAMSSMA 103
T P + Q TS +P + + A
Sbjct: 172 STSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRAAA 231
Query: 104 VFSSVRVRSMDDSVNEMAYQTSVNIGGHRFSGILYDQGPEQQSLNASPLDQHQNLNLTTI 163
VF VRV +++D +E AYQ V IGGH F G LYDQG E + S D H +
Sbjct: 232 VFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSDLHLG---GSA 288
Query: 164 HSHDGATMAPP 174
++H+G + + P
Sbjct: 289 NNHNGVSASVP 299
>emb|CAB62628.1| putative protein [Arabidopsis thaliana]
gi|15230389|ref|NP_190675.1| zinc finger protein,
putative / lateral root primordium (LRP) protein-related
[Arabidopsis thaliana] gi|11357622|pir||T45737
hypothetical protein F24M12.100 - Arabidopsis thaliana
Length = 252
Score = 91.7 bits (226), Expect = 1e-17
Identities = 49/112 (43%), Positives = 63/112 (55%), Gaps = 17/112 (15%)
Query: 11 GSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLME-HQPPPTTN 69
G CQ+CGNQAKK C++ RCRTCC ++GF+C THVRSTW+P +RR R + P T
Sbjct: 141 GVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQ 200
Query: 70 NPHHLHEDIPQSHNQN-PFTS-------------LEELKFPEAMSSMAVFSS 107
P E +P+ H +N P TS LE FP +SS AV +
Sbjct: 201 LPR--GESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVLGA 250
>emb|CAB81808.1| putative protein [Arabidopsis thaliana] gi|17386152|gb|AAL38622.1|
AT3g54430/T12E18_120 [Arabidopsis thaliana]
gi|15450615|gb|AAK96579.1| AT3g54430/T12E18_120
[Arabidopsis thaliana] gi|15232522|ref|NP_191011.1|
lateral root primordium (LRP) protein-related
[Arabidopsis thaliana] gi|11357989|pir||T47602
hypothetical protein T12E18.120 - Arabidopsis thaliana
Length = 183
Score = 87.0 bits (214), Expect = 3e-16
Identities = 48/140 (34%), Positives = 73/140 (51%), Gaps = 22/140 (15%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEHQPPPTTNNPHH 73
C++CGN+AKK C + RCRTCC ++G+ C THV+STWIP R ++++P
Sbjct: 41 CRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR----------SSSSPSE 90
Query: 74 LHEDIPQSHNQNP-------FTSLEELKF----PEAMSSMAVFSSVRVRSMDDSVN-EMA 121
+ + +P TS +E F P + + AVF RV ++ ++ E+
Sbjct: 91 RKKKLKIDKQSSPNVSLLPTTTSRQERGFREGLPGKIEAPAVFKRTRVTAISNNEQAEIG 150
Query: 122 YQTSVNIGGHRFSGILYDQG 141
YQ +V I GH F G L+ G
Sbjct: 151 YQATVTISGHIFKGFLHYYG 170
>ref|NP_198306.1| zinc finger protein-related [Arabidopsis thaliana]
Length = 173
Score = 85.1 bits (209), Expect = 1e-15
Identities = 40/81 (49%), Positives = 52/81 (63%), Gaps = 4/81 (4%)
Query: 11 GSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLME-HQPPPTTN 69
G CQ+ GNQAKK C++ RCRTCC ++GF+C THVRSTW+P +RR R + P T
Sbjct: 49 GVSCQDFGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPATKRRERQQQLATVQPQTQ 108
Query: 70 NPHHLHEDIPQSHNQN-PFTS 89
P E +P+ H +N P TS
Sbjct: 109 LPR--GESVPKRHRENLPATS 127
>dbj|BAD54563.1| putative LRP1 [Oryza sativa (japonica cultivar-group)]
gi|53792887|dbj|BAD54064.1| putative LRP1 [Oryza sativa
(japonica cultivar-group)]
Length = 384
Score = 79.7 bits (195), Expect = 5e-14
Identities = 29/48 (60%), Positives = 38/48 (78%)
Query: 11 GSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHR 58
G+ CQ+CGN AKK C++ RCRTCC ++GF C THV+STW+P +RR R
Sbjct: 130 GTSCQDCGNNAKKDCSHLRCRTCCRSRGFSCATHVKSTWVPAAKRRER 177
Score = 69.7 bits (169), Expect = 5e-11
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 94 KFPEAMSSMAVFSSVRVRSMDDSVNEMAYQTSVNIGGHRFSGILYDQGPEQQSLNASPLD 153
+FP +S AVF VR+ ++D++ E+AYQT+V+IGGH F GIL D GP ++ P
Sbjct: 261 RFPPELSVEAVFRCVRIGAVDEADAELAYQTAVSIGGHTFKGILRDHGPADEAAGQLPPS 320
Query: 154 QHQNLNLTTIHSHDGATMAP---------PSSSATAAHELFFPQPRSLASFRSGVPYFSH 204
+ LT + + +++AT+A L P P + +F +G +F H
Sbjct: 321 SAEYHQLTGQGREESSPAGSSEGVGGGHGAATAATSAAVLMDPYPTPIGAFAAGTQFFPH 380
>ref|NP_974772.1| lateral root primordium 1 (LRP1) [Arabidopsis thaliana]
Length = 226
Score = 78.6 bits (192), Expect = 1e-13
Identities = 34/58 (58%), Positives = 39/58 (66%), Gaps = 4/58 (6%)
Query: 14 CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEHQPPPTTNNP 71
CQ+CGNQAKK C RCRTCC ++GF C THV+STW+ RRR E Q PT NP
Sbjct: 112 CQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRR----ERQVMPTGANP 165
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.129 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 376,878,959
Number of Sequences: 2540612
Number of extensions: 15354855
Number of successful extensions: 42109
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 42025
Number of HSP's gapped (non-prelim): 96
length of query: 207
length of database: 863,360,394
effective HSP length: 122
effective length of query: 85
effective length of database: 553,405,730
effective search space: 47039487050
effective search space used: 47039487050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0258b.1