BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0252d.2
(519 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thali... 360 8e-98
dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thali... 343 6e-93
gb|AAL07167.1| putative selenium-binding protein [Arabidopsis th... 333 1e-89
gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana] gi|20... 331 3e-89
ref|XP_466170.1| putative pentatricopeptide (PPR) repeat-contain... 329 1e-88
ref|NP_919101.1| pentatricopeptide (PPR) repeat-containing prote... 327 6e-88
emb|CAB80403.1| putative protein [Arabidopsis thaliana] gi|44688... 326 1e-87
ref|NP_916644.1| putative selenium-binding protein [Oryza sativa... 323 8e-87
ref|XP_475319.1| putative pentatricopeptide repeat-containing pr... 322 1e-86
dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thali... 322 1e-86
ref|NP_198857.1| pentatricopeptide (PPR) repeat-containing prote... 322 1e-86
ref|XP_466795.1| putative pentatricopeptide (PPR) repeat-contain... 319 1e-85
dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana] g... 319 1e-85
dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana] 318 2e-85
ref|NP_200728.1| pentatricopeptide (PPR) repeat-containing prote... 318 2e-85
ref|NP_174603.1| pentatricopeptide (PPR) repeat-containing prote... 315 2e-84
gb|AAP53645.1| putative selenium-binding protein-like [Oryza sat... 308 4e-82
gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arab... 307 5e-82
gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana] gi|18... 303 7e-81
dbj|BAD42891.1| putative protein [Arabidopsis thaliana] 300 7e-80
>dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15240085|ref|NP_196272.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 360 bits (923), Expect = 8e-98
Identities = 198/516 (38%), Positives = 307/516 (59%), Gaps = 21/516 (4%)
Query: 8 SLVKKCKTLTQLKQVHAHILRCRRINHI---APLLSAAAATSNFS-------YARSIFLH 57
+L++ C + + LK +H +LR I+ + + LL+ S F+ YA IF
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 58 LTHRNTFIHNTMIRAYLLHAPSPAPALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSS 117
+ + N F+ N +IR + A P+ A Y+ ML++ I +N TFP LIKAS S
Sbjct: 77 IQNPNLFVFNLLIRCFSTGA-EPSKAFGFYTQMLKSRIWPDNITFPFLIKAS-----SEM 130
Query: 118 SSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMI 177
G H +V+FGF +D YV + + Y + A +F Q +DVV WT+M+
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 178 DGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDS 237
GY K G VE+ARE+F+EMP RN +WS M+ Y++ + F++ + LFE M+ G+ N++
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 238 VLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGI 297
V+V+V+++CAHLGAL G + Y + + N IL TALVDM+ +CG +E A+ VFEG+
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 298 ADKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGL 357
+ D+ +W+++I G+A+ G K++ F QM + G P + TF AVL+AC+HGG+V +GL
Sbjct: 311 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 358 RLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNAC 417
++E M +G+EPR EHY C+VD+L RAG + EAE F+ KM V+ + + GA+L AC
Sbjct: 371 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH--VKPNAPILGALLGAC 428
Query: 418 RIYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAG-WDAEAKRVRSMVSEAGMKKKP 476
+IYKN +V RV +I G ++L N+Y AG WD + + +R M+ E +KK P
Sbjct: 429 KIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWD-KIESLRDMMKEKLVKKPP 487
Query: 477 GCSIIEVGDEVEEFLAG-DHSHPQAQELCKLLDSIL 511
G S+IE+ ++ +F G D HP+ ++ + + IL
Sbjct: 488 GWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEIL 523
>dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15239979|ref|NP_201453.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 343 bits (881), Expect = 6e-93
Identities = 186/503 (36%), Positives = 292/503 (57%), Gaps = 16/503 (3%)
Query: 8 SLVKKCKTLTQLKQVHAHILRCRRINH---IAPLLS--AAAATSNF-SYARSIFLHLTHR 61
S +++C +LKQ+HA +L+ + I LS ++ +S+F YA+ +F
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 62 NTFIHNTMIRAYLLHAPSPAPALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSSSSNF 121
+TF+ N MIR + + P +L Y ML + N YTFP L+KA L + ++
Sbjct: 79 DTFLWNLMIRGFSC-SDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ- 136
Query: 122 TGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDGYG 181
+H + K G+ +D Y V+ I Y + + A LLFD+ E D V W ++I GY
Sbjct: 137 ----IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 182 KVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVLVT 241
K G ++ A LF +M E+NA+SW+ M++ Y + K+ L LF EMQN ++P++ L
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 242 VLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIADKD 301
L+ACA LGAL QG W+HSY + ++ + +L L+DMY+KCG +E AL VF+ I K
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 302 AGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLRLFE 361
AW A+ISG A G R+++ F +M G +P TF AVLTAC++ G+V +G +F
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 362 EMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRIYK 421
M Y ++P EHY C+VDLL RAG++ EA++F+++M ++ + +WGA+L ACRI+K
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP--LKPNAVIWGALLKACRIHK 430
Query: 422 NVDVGNRVWKKMIDKGVADCGTHILTYNMY-REAGWDAEAKRVRSMVSEAGMKKKPGCSI 480
N+++G + + +I G ++ N++ + WD +A R ++ E G+ K PGCS
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWD-KAAETRRLMKEQGVAKVPGCST 489
Query: 481 IEVGDEVEEFLAGDHSHPQAQEL 503
I + EFLAGD SHP+ +++
Sbjct: 490 ISLEGTTHEFLAGDRSHPEIEKI 512
>gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|10177180|dbj|BAB10314.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|15239745|ref|NP_199702.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 333 bits (853), Expect = 1e-89
Identities = 184/530 (34%), Positives = 302/530 (56%), Gaps = 30/530 (5%)
Query: 4 NNLTSLVKKCKTLTQLKQVHAHILRCRRINHI---APLLSAAAATS----NFSYARSIFL 56
++L + C+T+ L Q+HA ++ ++ A +L A + + YA IF
Sbjct: 24 SSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFN 83
Query: 57 HLTHRNTFIHNTMIRAYLLHAPSPAP-ALSCYSSMLRTG-ITVNNYTFPPLIKASLALLS 114
+ RN F NT+IR + A A++ + M+ + N +TFP ++KA
Sbjct: 84 QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKAC----- 138
Query: 115 SSSSSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTT-EKD---- 169
+ + G+ +HG +K+GF D +V+S + Y ++ AR+LF + EKD
Sbjct: 139 AKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVM 198
Query: 170 ---------VVLWTAMIDGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQV 220
+VLW MIDGY ++GD ++AR LF++M +R+ VSW+ M++ YS FK
Sbjct: 199 TDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDA 258
Query: 221 LALFEEMQNRGMKPNDSVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDM 280
+ +F EM+ ++PN LV+VL A + LG+L G W+H YA+ + + +L +AL+DM
Sbjct: 259 VEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 281 YSKCGCVESALTVFEGIADKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTF 340
YSKCG +E A+ VFE + ++ W+AMI+G A+ G +++ F +M G +P++ +
Sbjct: 319 YSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 378
Query: 341 VAVLTACTHGGMVHQGLRLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMG 400
+ +LTAC+HGG+V +G R F +M G+EPR EHY C+VDLL R+G++ EAE+F+ M
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 401 GLVEADLNVWGAILNACRIYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEA 460
++ D +W A+L ACR+ NV++G RV ++D D G ++ NMY G +E
Sbjct: 439 --IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 496
Query: 461 KRVRSMVSEAGMKKKPGCSIIEVGDEVEEFLAGDHSHPQAQELCKLLDSI 510
+R + E ++K PGCS+I++ + EF+ D SHP+A+E+ +L I
Sbjct: 497 SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEI 546
>gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein
[Arabidopsis thaliana] gi|15228028|ref|NP_181820.1|
pentatricopeptide (PPR) repeat-containing protein
[Arabidopsis thaliana] gi|25346328|pir||H84859
hypothetical protein At2g42920 [imported] - Arabidopsis
thaliana
Length = 559
Score = 331 bits (849), Expect = 3e-89
Identities = 186/505 (36%), Positives = 286/505 (55%), Gaps = 18/505 (3%)
Query: 12 KCKTLTQLKQVHAHILRCRRINHIAP----LLSAAAATSNFSYARSIFLHLTHRNTFIHN 67
+C T+ +LKQ+HA +++ I+ L A+ S+ +YA +F + H+N F+ N
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWN 93
Query: 68 TMIRAYLLHAPSPAPALSCYSSMLRTGITVN--NYTFPPLIKASLALLSSSSSSNFTGRL 125
T+IR + + P A+S + ML + +V T+P + KA L + GR
Sbjct: 94 TIIRGFS-RSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARD-----GRQ 147
Query: 126 VHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDGYGKVGD 185
+HG V+K G DD ++ + + Y L A +F DVV W +MI G+ K G
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGL 207
Query: 186 VESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVLVTVLTA 245
++ A+ LF+EMP+RN VSW++M++ + R FK L +F EMQ + +KP+ +V++L A
Sbjct: 208 IDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 246 CAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIADKDAGAW 305
CA+LGA QG W+H Y R + + N I+ TAL+DMY KCGC+E L VFE K W
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCW 327
Query: 306 NAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLRLFEEMSC 365
N+MI G+A +G ++++LF ++ G +P +F+ VLTAC H G VH+ F M
Sbjct: 328 NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKE 387
Query: 366 TYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRIYKNVDV 425
Y +EP +HY +V++L AG+++EAE ++ M VE D +W ++L+ACR NV++
Sbjct: 388 KYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMP--VEEDTVIWSSLLSACRKIGNVEM 445
Query: 426 GNRVWK--KMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKPGCSIIEV 483
R K K +D CG ++L N Y G EA R ++ E M+K+ GCS IEV
Sbjct: 446 AKRAAKCLKKLDPD-ETCG-YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEV 503
Query: 484 GDEVEEFLAGDHSHPQAQELCKLLD 508
EV EF++ +HP++ E+ LLD
Sbjct: 504 DFEVHEFISCGGTHPKSAEIYSLLD 528
Score = 89.7 bits (221), Expect = 2e-16
Identities = 65/297 (21%), Positives = 132/297 (43%), Gaps = 16/297 (5%)
Query: 110 LALLSSSSSSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCAS-RQLQTARLLFDQTTEK 168
L L+ + S+ + +H ++K G D S + F CAS + A L+F + K
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHK 87
Query: 169 DVVLWTAMIDGYGKVGDVESARELFEEM--------PERNAVSWSAMMAAYSRVSDFKQV 220
+ +W +I G+ + E A +F +M P+R +++ ++ AY R+ +
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSVFKAYGRLGQARDG 145
Query: 221 LALFEEMQNRGMKPNDSVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDM 280
L + G++ + + T+L G L + + + + + +++
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIF----LGMIGFDVVAWNSMIMG 201
Query: 281 YSKCGCVESALTVFEGIADKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTF 340
++KCG ++ A +F+ + ++ +WN+MISG +G + +L++F +M +P T
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 341 VAVLTACTHGGMVHQGLRLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFME 397
V++L AC + G QG R E E ++D+ + G ++E E
Sbjct: 262 VSLLNACAYLGASEQG-RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE 317
>ref|XP_466170.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa (japonica cultivar-group)]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa (japonica
cultivar-group)]
Length = 586
Score = 329 bits (843), Expect = 1e-88
Identities = 185/455 (40%), Positives = 268/455 (58%), Gaps = 18/455 (3%)
Query: 70 IRAYLLHAPSPAPA-LSCYSSMLRTGITVNNYTFPPLIKASLALLSSSSSSNFTGR---- 124
+ A L +PA A L+ Y+ + +TF L+ A+LA SSSS S
Sbjct: 35 LHAALARRGAPAAASLALYARIREEASPPTPFTFS-LLLAALASSSSSSPSPSPSAGCAR 93
Query: 125 -----LVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTAR-LLFDQTTEKDVVLWTAMID 178
L H K G P V + ++ YC+ L AR +L+ DVV W M+
Sbjct: 94 LAAACLAHAQAFKCGALAHPVVTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVS 153
Query: 179 GYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSV 238
GYGK GD+ +ARE+F MPERN VSWSAM+ A R +F + L +F+ M +P+ V
Sbjct: 154 GYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVV 213
Query: 239 LVTVLTACAHLGALTQGLWVHSYAKRCKVD---SNPILATALVDMYSKCGCVESALTVFE 295
LV+VL ACAHLGA+ +G WVH Y + N +L TALVDMY KCGC+E A VF+
Sbjct: 214 LVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFD 273
Query: 296 GIADKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQ 355
G+ +D WNAMI G+A++G ++LELF +M G P E+TF+AVL ACTH G V +
Sbjct: 274 GVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDE 333
Query: 356 GLRLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILN 415
G R+F+ M YG++P+ EHY C+ DLL RAG V+EAE + M +E + WGA+++
Sbjct: 334 GKRVFKSMQ-DYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMP--MEPHASQWGALMS 390
Query: 416 ACRIYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKK 475
+C+++ +++VG RV K++I+ D G +++ +N+Y G EA+ +R M+ + G KK+
Sbjct: 391 SCQMHNDINVGERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKE 450
Query: 476 PGCSIIEVGDEVEEFLAGDHSHPQAQELCKLLDSI 510
G S IE+ V EF++GD HP +++ LL+ I
Sbjct: 451 TGLSFIELNGLVHEFISGDTRHPLTRKIYALLEDI 485
>ref|NP_919101.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa (japonica cultivar-group)]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa (japonica
cultivar-group)] gi|22831309|dbj|BAC16163.1|
pentatricopeptide (PPR) repeat-containing protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 634
Score = 327 bits (838), Expect = 6e-88
Identities = 182/514 (35%), Positives = 283/514 (54%), Gaps = 15/514 (2%)
Query: 1 MNQNNLTSLVKKCKTLTQLKQVHAHILRCRRINHIAP---LLSAAAATSNFSYARSIFLH 57
+ + + L+ C TL + ++HA +R A L A AA+ ++
Sbjct: 32 LTADRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRL 91
Query: 58 LTHRNTFIHNTMIRAYLLHAPSPAPALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSS 117
T + + I A+ A AL+ S ML G+ ++T + A L
Sbjct: 92 TPDPTTVFYTSAIHAHSSRGLHLA-ALALLSEMLGRGLIPTSHTLSSSLPACHGLA---- 146
Query: 118 SSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMI 177
GR +H + K D YV + + Y AR LFD+ + VV TAM+
Sbjct: 147 ----LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAML 202
Query: 178 DGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDS 237
Y K+G ++ ARELF+ MP ++ + W+AM+ Y++ + L LF M G+ P++
Sbjct: 203 TCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEV 262
Query: 238 VLVTVLTACAHLGALTQGLWVHSYAKRCK-VDSNPILATALVDMYSKCGCVESALTVFEG 296
++ L+A A LG G W+HSY K + V N + TAL+DMY KCG +E A++VF
Sbjct: 263 AIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNS 322
Query: 297 IADKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQG 356
I DKD WNAMI+G A+ GD RK+LE+F Q+ + G PT+ TF+ +L AC+H G+V +G
Sbjct: 323 IGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEG 382
Query: 357 LRLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNA 416
+ F+ M Y + P+ EHY C+VDLL RAG+++EA ++ M + D +W ++L A
Sbjct: 383 HQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSM--TIAPDTVMWVSLLAA 440
Query: 417 CRIYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKP 476
CR++KN+ +G ++ ++ G+A+ G +IL N+Y G E RVRSM+ +G++K+P
Sbjct: 441 CRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEP 500
Query: 477 GCSIIEVGDEVEEFLAGDHSHPQAQELCKLLDSI 510
GCS IEVG +V EF+AGD SHP+ E+ +L+ +
Sbjct: 501 GCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKM 534
>emb|CAB80403.1| putative protein [Arabidopsis thaliana] gi|4468804|emb|CAB38205.1|
putative protein [Arabidopsis thaliana]
gi|15235537|ref|NP_195454.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|7486505|pir||T04732 hypothetical protein F6G17.30 -
Arabidopsis thaliana
Length = 632
Score = 326 bits (836), Expect = 1e-87
Identities = 179/513 (34%), Positives = 295/513 (56%), Gaps = 20/513 (3%)
Query: 6 LTSLVKKCKTLTQLKQVHAHILRCRRINHIA-PLLS-----AAAATSNFSYARSIFLHLT 59
L L+ K +++ ++ Q+HA ILR + H P+L+ A A+ ++ ++F
Sbjct: 32 LAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTI 91
Query: 60 HRNTFIHNTMIRAYLLHAPSPAPALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSSSS 119
+ F+ I ++ A Y +L + I N +TF L+K S S
Sbjct: 92 DPDLFLFTAAINTASINGLKDQ-AFLLYVQLLSSEINPNEFTFSSLLK---------SCS 141
Query: 120 NFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDG 179
+G+L+H HV+KFG DPYV +G ++ Y + +A+ +FD+ E+ +V TAMI
Sbjct: 142 TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 180 YGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGM-KPNDSV 238
Y K G+VE+AR LF+ M ER+ VSW+ M+ Y++ L LF+++ G KP++
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 239 LVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIA 298
+V L+AC+ +GAL G W+H + K ++ N + T L+DMYSKCG +E A+ VF
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 299 DKDAGAWNAMISGVALSGDVRKSLELFHQM-AAHGTQPTETTFVAVLTACTHGGMVHQGL 357
KD AWNAMI+G A+ G + +L LF++M G QPT+ TF+ L AC H G+V++G+
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 358 RLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNAC 417
R+FE M YG++P+ EHY C+V LL RAG +K A + ++ M ++AD +W ++L +C
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMN--MDADSVLWSSVLGSC 439
Query: 418 RIYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKPG 477
+++ + +G + + +I + + G ++L N+Y G +VR+++ E G+ K+PG
Sbjct: 440 KLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499
Query: 478 CSIIEVGDEVEEFLAGDHSHPQAQELCKLLDSI 510
S IE+ ++V EF AGD H +++E+ +L I
Sbjct: 500 ISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
>ref|NP_916644.1| putative selenium-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 617
Score = 323 bits (828), Expect = 8e-87
Identities = 184/514 (35%), Positives = 291/514 (55%), Gaps = 20/514 (3%)
Query: 19 LKQVHAHILRCRRI---NHIAPLLSAAAATSN-------FSYARSIFLHLTHRNTFIHNT 68
L+++HAH+L RI +H+A L++ A++S+ SYAR + L HN+
Sbjct: 20 LREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLSYAR-LLLPRRPATLLAHNS 78
Query: 69 MIRAYLLHAPSPAPALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSSSSNFTGRL--- 125
++RA L P A + + + +NY+F L++A+ AL ++++S+ +
Sbjct: 79 LLRA-LARGRRPHLAFGAFRDL---PLAPDNYSFTFLVRAATALAAAAASALDAALIAGS 134
Query: 126 VHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDGYGKVGD 185
VH ++ G DP+V SG + Y A+ + AR F + DVV TAM+ G+
Sbjct: 135 VHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGE 194
Query: 186 VESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVLVTVLTA 245
++ARELF+ MP+R+ V+W+AM+A Y ++ L LF+EM++ G + LV+ LTA
Sbjct: 195 ADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTA 254
Query: 246 CAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIADKDAGAW 305
CA LGAL +G WVHS A + + L TAL+DMYSKCG V +A+ VF+ + +++ W
Sbjct: 255 CAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTW 314
Query: 306 NAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLRLFEEMSC 365
+ +SG+A++G R L LF +M + G +P TFV VL C+ G+V +G F+ M
Sbjct: 315 TSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKS 374
Query: 366 TYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRIYKNVDV 425
+G++P EHY C+VDL RAG + +A F+ M +E VWGA+LNA RI+KNV++
Sbjct: 375 NHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMP--LEPHEGVWGALLNASRIHKNVEL 432
Query: 426 GNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKPGCSIIEVGD 485
G K++ + H+L N+Y ++ VR+M+ G+KK PGCS IEVG
Sbjct: 433 GKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGG 492
Query: 486 EVEEFLAGDHSHPQAQELCKLLDSILMMANLEHF 519
+V EF G +HP+ +E+ +L + L+ +
Sbjct: 493 KVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGY 526
>ref|XP_475319.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
(japonica cultivar-group)] gi|46981301|gb|AAT07619.1|
putative pentatricopeptide repeat-containing protein
[Oryza sativa (japonica cultivar-group)]
Length = 551
Score = 322 bits (826), Expect = 1e-86
Identities = 176/510 (34%), Positives = 287/510 (55%), Gaps = 19/510 (3%)
Query: 10 VKKCKTLTQLKQVHAHILRCR--RINHIAP-LLSAAAATSNFSYARSIFLHLTHRNTFIH 66
++ C T L +VH H++R R + +++A ++ A ++A +F + N +H
Sbjct: 21 LRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLH 80
Query: 67 NTMIRAYLLHAPSPAPALSCYSSMLRTGITV-------NNYTFPPLIKASLALLSSSSSS 119
N MI+AY + A++ Y MLR + + +T+P L+KA +++
Sbjct: 81 NAMIKAYAQNHQH-RDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKAC-----GGTAA 134
Query: 120 NFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDG 179
G+ VH HVV+ G V + IE Y + L A +FD+ E+DVV W +I
Sbjct: 135 LELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISA 194
Query: 180 YGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVL 239
+ ++G + A LF MP++ V+W+AM++ Y+ V D+ + F MQ G +P+D +
Sbjct: 195 HARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSI 254
Query: 240 VTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIAD 299
V VL ACA LGAL G W+++Y KR + ++ + AL++MY+KCGC++ AL +F+G+AD
Sbjct: 255 VAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 300 KDAGAWNAMISGVALSGDVRKSLELFHQMAAHG-TQPTETTFVAVLTACTHGGMVHQGLR 358
KD +W+ +I G+A G +++ LF +M G +P TFV +L+AC++ G+V +GL
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 359 LFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACR 418
F+ M+ YGVEP EHY CVVDLL R+G ++ A + M V AD VWG++L+ACR
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMP--VPADAKVWGSLLSACR 432
Query: 419 IYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKPGC 478
+ +VD +++++ D G ++ N+Y A ++ R + M+K PGC
Sbjct: 433 SHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGC 492
Query: 479 SIIEVGDEVEEFLAGDHSHPQAQELCKLLD 508
S+IEVG+ V EF+AG+ + L +LD
Sbjct: 493 SLIEVGNVVREFVAGEGLSSELGGLAGVLD 522
>dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 612
Score = 322 bits (826), Expect = 1e-86
Identities = 181/497 (36%), Positives = 286/497 (57%), Gaps = 17/497 (3%)
Query: 15 TLTQLKQVHA--HILRCRRINHIAPLLSAAAATSN---FSYARSIFLHLTHRNTFIHNTM 69
T +++Q+HA ++ + +H+ A A S+ YA I F N+M
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 70 IRAYLLHAPSPAPALSCYSSMLRTG--ITVNNYTFPPLIKASLALLSSSSSSNFTGRLVH 127
IRA+ +P P + Y +L +G + +NYT L++A L TG VH
Sbjct: 78 IRAHC-KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRE-----TGLQVH 131
Query: 128 GHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDGYGKVGDVE 187
G ++ GF +DP+V +G I Y L + +F+ D V TAM+ + GDV
Sbjct: 132 GMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVV 191
Query: 188 SARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVLVTVLTACA 247
AR+LFE MPER+ ++W+AM++ Y++V + ++ L +F MQ G+K N +++VL+AC
Sbjct: 192 FARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACT 251
Query: 248 HLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIADKDAGAWNA 307
LGAL QG W HSY +R K+ LAT LVD+Y+KCG +E A+ VF G+ +K+ W++
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSS 311
Query: 308 MISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLRLFEEMSCTY 367
++G+A++G K LELF M G P TFV+VL C+ G V +G R F+ M +
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 368 GVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRIYKNVDVGN 427
G+EP+ EHY C+VDL +RAG +++A +++M ++ VW ++L+A R+YKN+++G
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP--MKPHAAVWSSLLHASRMYKNLELGV 429
Query: 428 RVWKKMIDKGVADCGTHILTYNMYREAG-WDAEAKRVRSMVSEAGMKKKPGCSIIEVGDE 486
KKM++ A+ G ++L N+Y ++ WD VR + G++K+PGCS++EV E
Sbjct: 430 LASKKMLELETANHGAYVLLSNIYADSNDWD-NVSHVRQSMKSKGVRKQPGCSVMEVNGE 488
Query: 487 VEEFLAGDHSHPQAQEL 503
V EF GD SHP+ ++
Sbjct: 489 VHEFFVGDKSHPKYTQI 505
>ref|NP_198857.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 1155
Score = 322 bits (826), Expect = 1e-86
Identities = 181/497 (36%), Positives = 286/497 (57%), Gaps = 17/497 (3%)
Query: 15 TLTQLKQVHA--HILRCRRINHIAPLLSAAAATSN---FSYARSIFLHLTHRNTFIHNTM 69
T +++Q+HA ++ + +H+ A A S+ YA I F N+M
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 70 IRAYLLHAPSPAPALSCYSSMLRTG--ITVNNYTFPPLIKASLALLSSSSSSNFTGRLVH 127
IRA+ +P P + Y +L +G + +NYT L++A L TG VH
Sbjct: 78 IRAHC-KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRE-----TGLQVH 131
Query: 128 GHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDGYGKVGDVE 187
G ++ GF +DP+V +G I Y L + +F+ D V TAM+ + GDV
Sbjct: 132 GMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVV 191
Query: 188 SARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVLVTVLTACA 247
AR+LFE MPER+ ++W+AM++ Y++V + ++ L +F MQ G+K N +++VL+AC
Sbjct: 192 FARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACT 251
Query: 248 HLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIADKDAGAWNA 307
LGAL QG W HSY +R K+ LAT LVD+Y+KCG +E A+ VF G+ +K+ W++
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSS 311
Query: 308 MISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLRLFEEMSCTY 367
++G+A++G K LELF M G P TFV+VL C+ G V +G R F+ M +
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 368 GVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRIYKNVDVGN 427
G+EP+ EHY C+VDL +RAG +++A +++M ++ VW ++L+A R+YKN+++G
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP--MKPHAAVWSSLLHASRMYKNLELGV 429
Query: 428 RVWKKMIDKGVADCGTHILTYNMYREAG-WDAEAKRVRSMVSEAGMKKKPGCSIIEVGDE 486
KKM++ A+ G ++L N+Y ++ WD VR + G++K+PGCS++EV E
Sbjct: 430 LASKKMLELETANHGAYVLLSNIYADSNDWD-NVSHVRQSMKSKGVRKQPGCSVMEVNGE 488
Query: 487 VEEFLAGDHSHPQAQEL 503
V EF GD SHP+ ++
Sbjct: 489 VHEFFVGDKSHPKYTQI 505
Score = 240 bits (613), Expect = 7e-62
Identities = 139/465 (29%), Positives = 237/465 (50%), Gaps = 47/465 (10%)
Query: 51 ARSIFLHLTHRNTFIHNTMIRAYLLHAPSPAPALSCYSSMLR-----TGITVNNYTFPPL 105
A +F + R+ N++I Y C+ + R G N TF +
Sbjct: 632 AEKLFDEMPERDLVSWNSLISGY----SGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSM 687
Query: 106 IKASLALLSSSSSSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQT 165
I A + S GR +HG V+KFG ++ VV+ FI +Y
Sbjct: 688 ISACVY-----GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWY---------------- 726
Query: 166 TEKDVVLWTAMIDGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFE 225
GK GD+ S+ +LFE++ +N VSW+ M+ + + ++ LA F
Sbjct: 727 ---------------GKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN 771
Query: 226 EMQNRGMKPNDSVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCG 285
+ G +P+ + + VL +C +G + +H N + TAL+D+YSK G
Sbjct: 772 MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLG 831
Query: 286 CVESALTVFEGIADKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLT 345
+E + TVF I D+ AW AM++ A G R +++ F M +G P TF +L
Sbjct: 832 RLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLN 891
Query: 346 ACTHGGMVHQGLRLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEA 405
AC+H G+V +G FE MS Y ++PR +HY+C+VDLL R+G++++A +++M +E
Sbjct: 892 ACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP--MEP 949
Query: 406 DLNVWGAILNACRIYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRS 465
VWGA+L ACR+YK+ +G + +++ + D +++ N+Y +G +A R+R+
Sbjct: 950 SSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRN 1009
Query: 466 MVSEAGMKKKPGCSIIEVGDEVEEFLAGDHSHPQAQELCKLLDSI 510
++ + G+ + GCS IE G+++ +F+ GD SHP+++++ K L I
Sbjct: 1010 LMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 1054
Score = 97.1 bits (240), Expect = 1e-18
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 16/248 (6%)
Query: 176 MIDGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQ--NRGMK 233
++ Y ++G A +LF+EMPER+ VSW+++++ YS + + M G +
Sbjct: 619 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 678
Query: 234 PNDSVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTV 293
PN+ +++++AC + G+ +G +H + V + A ++ Y K G + S+ +
Sbjct: 679 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 738
Query: 294 FEGIADKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMV 353
FE ++ K+ +WN MI +G K L F+ G +P + TF+AVL +C G+V
Sbjct: 739 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 798
Query: 354 H-----QGLRLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLN 408
GL +F S + ++DL S+ G ++++ + + D
Sbjct: 799 RLAQGIHGLIMFGGFSGNKCIT------TALLDLYSKLGRLEDSSTVFHE---ITSPDSM 849
Query: 409 VWGAILNA 416
W A+L A
Sbjct: 850 AWTAMLAA 857
>ref|XP_466795.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa (japonica cultivar-group)]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa (japonica
cultivar-group)] gi|47847758|dbj|BAD21535.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa (japonica cultivar-group)]
Length = 530
Score = 319 bits (818), Expect = 1e-85
Identities = 177/521 (33%), Positives = 287/521 (54%), Gaps = 22/521 (4%)
Query: 2 NQNNLTSLVKKCKTLTQLKQVHAHILRCRRIN------HIAPLLSAAAATSNFSYARSIF 55
+ + + + +C TL LKQ+HAH + R H+ L A+ S YAR +F
Sbjct: 9 SHGDFVAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHL--LRFASLRLSCLPYARRLF 66
Query: 56 LHLTHRNTFIHNTMIRAYLL---HAPSPA-PALSCYSSMLRTGITV-NNYTFPPLIKASL 110
N F+++ M+ AY H+ A +L+ + MLR G N + +P +++A+
Sbjct: 67 DATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAAC 126
Query: 111 ALLSSSSSSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDV 170
A+ S +H H K GF+ ++ + ++ Y + AR LFD T+++V
Sbjct: 127 AIGVQLVRS------IHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDRNV 180
Query: 171 VLWTAMIDGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNR 230
V WTA++ GY + G V A LFE MP+R+ +W+A++A ++ F + + +F M +
Sbjct: 181 VSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDE 240
Query: 231 GMKPNDSVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESA 290
G +PN + + +L+AC HLG L G +H YA R V + L+DMY KCG + A
Sbjct: 241 GFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEA 300
Query: 291 LTVFEGIADKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHG 350
+F+ +D+ WN++I+ +AL G ++ +F+ M G QP E TFV +L ACTHG
Sbjct: 301 KWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHG 360
Query: 351 GMVHQGLRLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVW 410
G V +GLR FE M +G+EP EHY CVVDLL RAG ++A F+ M V+ D +W
Sbjct: 361 GFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDM--KVQPDEVIW 418
Query: 411 GAILNACRIYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSE- 469
G++LNACRI++++++ + ++D ++ ++ N+Y E G+ E ++VR ++ E
Sbjct: 419 GSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKED 478
Query: 470 AGMKKKPGCSIIEVGDEVEEFLAGDHSHPQAQELCKLLDSI 510
KK PGCS IEV + F +GD HP+++++ LD +
Sbjct: 479 VTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKL 519
>dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|15241180|ref|NP_200442.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 319 bits (818), Expect = 1e-85
Identities = 179/513 (34%), Positives = 301/513 (57%), Gaps = 16/513 (3%)
Query: 6 LTSLVKKCKTLTQLKQVHAHIL--RCRRIN-HIAPLLSAAAATSNFSYARSIFLHLTHRN 62
+TSL L LKQ H +++ R N ++A + A + + YA S+F H N
Sbjct: 18 VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPN 77
Query: 63 TFIHNTMIRAY-LLHAPSP-APALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSSSSN 120
T++HNTMIRA LL P+ + A++ Y + + +TFP ++K ++ + S
Sbjct: 78 TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRV-----SDV 132
Query: 121 FTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDGY 180
+ GR +HG VV FGF +VV+G I+ Y + L AR +FD+ KDV +W A++ GY
Sbjct: 133 WFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGY 192
Query: 181 GKVGDVESARELFEEMP--ERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSV 238
GKVG+++ AR L E MP RN VSW+ +++ Y++ + + +F+ M ++P++
Sbjct: 193 GKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVT 252
Query: 239 LVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIA 298
L+ VL+ACA LG+L G + SY ++ L A++DMY+K G + AL VFE +
Sbjct: 253 LLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN 312
Query: 299 DKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLR 358
+++ W +I+G+A G ++L +F++M G +P + TF+A+L+AC+H G V G R
Sbjct: 313 ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKR 372
Query: 359 LFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACR 418
LF M YG+ P EHY C++DLL RAG ++EA++ ++ M +A+ +WG++L A
Sbjct: 373 LFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP--FKANAAIWGSLLAASN 430
Query: 419 IYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAG-WDAEAKRVRSMVSEAGMKKKPG 477
++ ++++G R ++I + G ++L N+Y G WD E++ +R+M+ G+KK G
Sbjct: 431 VHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD-ESRMMRNMMKGIGVKKMAG 489
Query: 478 CSIIEVGDEVEEFLAGDHSHPQAQELCKLLDSI 510
S IEV + V +F++GD +HPQ + + ++L +
Sbjct: 490 ESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
>dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
Length = 544
Score = 318 bits (816), Expect = 2e-85
Identities = 165/511 (32%), Positives = 288/511 (56%), Gaps = 15/511 (2%)
Query: 3 QNNLTSLVKKCKTLTQLKQVHAHILRCRRINH---IAPLLSAAAATSNFSYARSIFLHLT 59
+ L S+++ CK + + +HA I+R + L+ + + YA +F +++
Sbjct: 29 RKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS 88
Query: 60 HRNTFIHNTMIRAYLLHAPSPAPALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSSSS 119
+ N +++ MI ++ S A +S Y M+ + +NY ++KA +
Sbjct: 89 NPNVYLYTAMIDGFVSSGRS-ADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVC----- 142
Query: 120 NFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDG 179
R +H V+K GF V +E Y S +L A+ +FD+ ++D V T MI+
Sbjct: 143 ----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 180 YGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVL 239
Y + G ++ A ELF+++ ++ V W+AM+ R + + L LF EMQ + N+
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 240 VTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIAD 299
V VL+AC+ LGAL G WVHS+ + +++ + + AL++MYS+CG + A VF + D
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 300 KDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLRL 359
KD ++N MISG+A+ G +++ F M G +P + T VA+L AC+HGG++ GL +
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
Query: 360 FEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRI 419
F M + VEP+ EHY C+VDLL R G ++EA +F+E + +E D + G +L+AC+I
Sbjct: 379 FNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP--IEPDHIMLGTLLSACKI 436
Query: 420 YKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKPGCS 479
+ N+++G ++ K++ + D GT++L N+Y +G E+ +R + ++G++K+PGCS
Sbjct: 437 HGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCS 496
Query: 480 IIEVGDEVEEFLAGDHSHPQAQELCKLLDSI 510
IEV +++ EFL GD +HP + + + L +
Sbjct: 497 TIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
>ref|NP_200728.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 590
Score = 318 bits (816), Expect = 2e-85
Identities = 165/511 (32%), Positives = 288/511 (56%), Gaps = 15/511 (2%)
Query: 3 QNNLTSLVKKCKTLTQLKQVHAHILRCRRINH---IAPLLSAAAATSNFSYARSIFLHLT 59
+ L S+++ CK + + +HA I+R + L+ + + YA +F +++
Sbjct: 75 RKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS 134
Query: 60 HRNTFIHNTMIRAYLLHAPSPAPALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSSSS 119
+ N +++ MI ++ S A +S Y M+ + +NY ++KA +
Sbjct: 135 NPNVYLYTAMIDGFVSSGRS-ADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVC----- 188
Query: 120 NFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDG 179
R +H V+K GF V +E Y S +L A+ +FD+ ++D V T MI+
Sbjct: 189 ----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 244
Query: 180 YGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVL 239
Y + G ++ A ELF+++ ++ V W+AM+ R + + L LF EMQ + N+
Sbjct: 245 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 304
Query: 240 VTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIAD 299
V VL+AC+ LGAL G WVHS+ + +++ + + AL++MYS+CG + A VF + D
Sbjct: 305 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 364
Query: 300 KDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLRL 359
KD ++N MISG+A+ G +++ F M G +P + T VA+L AC+HGG++ GL +
Sbjct: 365 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 424
Query: 360 FEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRI 419
F M + VEP+ EHY C+VDLL R G ++EA +F+E + +E D + G +L+AC+I
Sbjct: 425 FNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP--IEPDHIMLGTLLSACKI 482
Query: 420 YKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKPGCS 479
+ N+++G ++ K++ + D GT++L N+Y +G E+ +R + ++G++K+PGCS
Sbjct: 483 HGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCS 542
Query: 480 IIEVGDEVEEFLAGDHSHPQAQELCKLLDSI 510
IEV +++ EFL GD +HP + + + L +
Sbjct: 543 TIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 573
>ref|NP_174603.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|12322567|gb|AAG51281.1| PPR-repeat protein,
putative [Arabidopsis thaliana]
gi|12322383|gb|AAG51215.1| unknown protein; 15445-13829
[Arabidopsis thaliana] gi|25403183|pir||C86457 unknown
protein, 15445-13829 [imported] - Arabidopsis thaliana
Length = 538
Score = 315 bits (808), Expect = 2e-84
Identities = 186/522 (35%), Positives = 295/522 (55%), Gaps = 28/522 (5%)
Query: 6 LTSLVKKCKTLTQLKQV----------HAHILRCRRINHIAPLLSAAAATSNFSYARSIF 55
+++++ K + L LKQV H+H L C ++ L N SYAR IF
Sbjct: 27 ISAVISKSRHLNHLKQVQSFMIVSGLSHSHFL-CFKLLRFCTL-----RLCNLSYARFIF 80
Query: 56 LHLTHRNTFIHNTMIRAYLLHAPSPAP-ALSCYSSMLRTGITVNNYTFPPLIKASLALLS 114
+ NT ++ ++ AY P A A S + M+ + N+ PL+ S LS
Sbjct: 81 DRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLS 140
Query: 115 SSSSSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCAS-RQLQTARLLFDQTTEKDVVLW 173
S+ F+ LVH H+ K GFH V + + Y +S + AR LFD+ +E++VV W
Sbjct: 141 SA----FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSW 196
Query: 174 TAMIDGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNR-GM 232
TAM+ GY + GD+ +A LFE+MPER+ SW+A++AA ++ F + ++LF M N +
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 233 KPNDSVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALT 292
+PN+ +V VL+ACA G L +H++A R + S+ ++ +LVD+Y KCG +E A +
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 293 VFEGIADKDAGAWNAMISGVALSGDVRKSLELFHQMAA---HGTQPTETTFVAVLTACTH 349
VF+ + K AWN+MI+ AL G +++ +F +M + +P TF+ +L ACTH
Sbjct: 317 VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Query: 350 GGMVHQGLRLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNV 409
GG+V +G F+ M+ +G+EPR EHY C++DLL RAG EA + M M ++AD +
Sbjct: 377 GGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK--MKADEAI 434
Query: 410 WGAILNACRIYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSE 469
WG++LNAC+I+ ++D+ K ++ + G + N+Y E G EA+R R M+
Sbjct: 435 WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 494
Query: 470 AGMKKKPGCSIIEVGDEVEEFLAGDHSHPQAQELCKLLDSIL 511
K PG S IE+ +EV +F + D SHP+ +E+ +LDS++
Sbjct: 495 QNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
>gb|AAP53645.1| putative selenium-binding protein-like [Oryza sativa (japonica
cultivar-group)] gi|37534112|ref|NP_921358.1| putative
selenium-binding protein-like [Oryza sativa (japonica
cultivar-group)] gi|13940614|gb|AAK50416.1| Putative
selenium-binding protein-like [Oryza sativa]
Length = 651
Score = 308 bits (788), Expect = 4e-82
Identities = 175/511 (34%), Positives = 276/511 (53%), Gaps = 14/511 (2%)
Query: 9 LVKKCKTLTQLKQVHAHILRCRRINHIAPLLSAAAATSNFSY------ARSIFLHLTHRN 62
L+K C L + A + R+ + + AAT S AR +F R+
Sbjct: 131 LLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRD 190
Query: 63 TFIHNTMIRAYLLHAPSPAPALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSSSSNFT 122
NT+I Y+ +PA AL + M+ V P + A+ +
Sbjct: 191 LVSWNTLIGGYVRRG-NPAEALELFWRMVAEDAVVR----PDEVTMIAAVSGCGQMRDLE 245
Query: 123 -GRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDGYG 181
GR +HG V G +++ ++ Y L+ A+ +F++ + VV WT MI G+
Sbjct: 246 LGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFA 305
Query: 182 KVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVLVT 241
K G ++ AR++F+EMPER+ W+A+M Y + K+ L+LF EMQ + P++ +V
Sbjct: 306 KFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVN 365
Query: 242 VLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIADKD 301
+LTAC+ LGAL G+WVH Y ++ ++ + L T+L+DMY+KCG +E A+ +F+ I +K+
Sbjct: 366 LLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKN 425
Query: 302 AGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLRLFE 361
A W AMI G+A G +++E F M G +P E TF+ VL+AC H G+V +G F
Sbjct: 426 ALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFS 485
Query: 362 EMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRIYK 421
M Y +E + +HY+C++DLL RAG + EAE+ + M +E D VWGAI ACR+
Sbjct: 486 LMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMP--MEPDAVVWGAIFFACRMQG 543
Query: 422 NVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKPGCSII 481
N+ +G + K+++ +D G ++L NMY EA +A +VR+M+ G++K PGCS I
Sbjct: 544 NISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCI 603
Query: 482 EVGDEVEEFLAGDHSHPQAQELCKLLDSILM 512
E+ V EF+ D SH + + L I +
Sbjct: 604 ELNGVVHEFIVKDKSHMDSHAIYDCLHEITL 634
Score = 122 bits (305), Expect = 4e-26
Identities = 114/475 (24%), Positives = 191/475 (40%), Gaps = 94/475 (19%)
Query: 16 LTQLKQVHAHILRCRRINHIAPLLSAA-----------AATSNFSYARSIFLHLTHRNTF 64
L +L Q+HAH+L + + LL+AA A TS S R L+
Sbjct: 23 LRRLLQIHAHLLAAGLLQDFSSLLAAAYALSTTATATDARTSPPSPLRHALALLSSLPAS 82
Query: 65 IHNTMIRAYLLHAPSP-------APALSCYSSMLRTGIT-VNNYTFPPLIKASLALLSSS 116
+N IRA L L Y ++LR+G ++ TFP L+KA L
Sbjct: 83 AYNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWG 142
Query: 117 SSSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAM 176
G HV++ G D +VV+ F ++ AR LFD++ +D+V W +
Sbjct: 143 -----YGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTL 197
Query: 177 IDGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPND 236
I GY + G+ A ELF M +AV ++P++
Sbjct: 198 IGGYVRRGNPAEALELFWRMVAEDAV-----------------------------VRPDE 228
Query: 237 SVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEG 296
++ ++ C + L G +H + V L AL+DMY KCG +E A +VFE
Sbjct: 229 VTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFER 288
Query: 297 I-------------------------------ADKDAGAWNAMISGVALSGDVRKSLELF 325
I ++D WNA+++G +++L LF
Sbjct: 289 IEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLF 348
Query: 326 HQMAAHGTQPTETTFVAVLTACTHGGMVHQGL---RLFEEMSCTYGVEPRGEHYACVVDL 382
H+M P E T V +LTAC+ G + G+ R E+ + V ++D+
Sbjct: 349 HEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALG----TSLIDM 404
Query: 383 LSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRIYKNVDVGNRVWKKMIDKG 437
++ G +++A ++ + E + W A++ + + + ++ MI+ G
Sbjct: 405 YAKCGNIEKAIHIFKE---IPEKNALTWTAMICGLANHGHANEAIEHFRTMIELG 456
Score = 59.7 bits (143), Expect = 2e-07
Identities = 74/315 (23%), Positives = 124/315 (38%), Gaps = 47/315 (14%)
Query: 103 PPLIKASLALLSSSSSSNFTGRL--VHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARL 160
PP LALLS+ RL +H H++ G D F A+ L T
Sbjct: 4 PPPSSRLLALLSARRPPPPLRRLLQIHAHLLAAGLLQD------FSSLLAAAYALSTTAT 57
Query: 161 LFDQTTEKDVVLWTAMIDGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSD---- 216
D T L A+ L +P A +++A + A S D
Sbjct: 58 ATDARTSPPSPLRHALA--------------LLSSLP---ASAYNAAIRALSLSDDGDRH 100
Query: 217 ----FKQVLALFEEMQNRGM-KPNDSVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNP 271
++ L L+ + G +P+ +L ACA L G ++ R +DS+
Sbjct: 101 GHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDV 160
Query: 272 ILATALVDMYSKCGCVESALTVFEGIADKDAGAWNAMISGVALSGDVRKSLELFHQMAAH 331
+ A S G +E A +F+ +D +WN +I G G+ ++LELF +M A
Sbjct: 161 FVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAE 220
Query: 332 G--TQPTETTFVAVLTACTHGGMVHQGLRLF-----EEMSCTYGVEPRGEHYACVVDLLS 384
+P E T +A ++ C + G RL + +SCT + ++D+
Sbjct: 221 DAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRL------MNALMDMYI 274
Query: 385 RAGMVKEAEKFMEKM 399
+ G ++ A+ E++
Sbjct: 275 KCGSLEMAKSVFERI 289
>gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis
thaliana] gi|15225375|ref|NP_179644.1| pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
gi|25346332|pir||E84590 hypothetical protein At2g20540
[imported] - Arabidopsis thaliana
Length = 534
Score = 307 bits (787), Expect = 5e-82
Identities = 162/509 (31%), Positives = 287/509 (55%), Gaps = 12/509 (2%)
Query: 3 QNNLTSLVKKCKTLTQLKQVHAHIL---RCRRINHIAPLLSAAAATSNFSYARSIFLHLT 59
+N +++ K+ + K+++A I+ + + ++ + YA +F ++
Sbjct: 10 ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVS 69
Query: 60 HRNTFIHNTMIRAYLLHAPSPAPALSCYSSMLRTGITV-NNYTFPPLIKASLALLSSSSS 118
+ N F++N++IRAY H + Y +LR + + +TFP + K+ +L
Sbjct: 70 NPNVFLYNSIIRAYT-HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL-----G 123
Query: 119 SNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMID 178
S + G+ VHGH+ KFG + I+ Y L A +FD+ E+DV+ W +++
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 179 GYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSV 238
GY ++G ++ A+ LF M ++ VSW+AM++ Y+ + + + + F EMQ G++P++
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 239 LVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIA 298
L++VL +CA LG+L G W+H YA+R + AL++MYSKCG + A+ +F +
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 299 DKDAGAWNAMISGVALSGDVRKSLELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLR 358
KD +W+ MISG A G+ ++E F++M +P TF+ +L+AC+H GM +GLR
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 359 LFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACR 418
F+ M Y +EP+ EHY C++D+L+RAG ++ A + + M ++ D +WG++L++CR
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP--MKPDSKIWGSLLSSCR 421
Query: 419 IYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKPGC 478
N+DV +++ D G ++L N+Y + G + R+R M+ MKK PG
Sbjct: 422 TPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGG 481
Query: 479 SIIEVGDEVEEFLAGDHSHPQAQELCKLL 507
S+IEV + V+EF++GD+S P E+ +L
Sbjct: 482 SLIEVNNIVQEFVSGDNSKPFWTEISIVL 510
>gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19
[Arabidopsis thaliana] gi|15227199|ref|NP_179827.1|
pentatricopeptide (PPR) repeat-containing protein
[Arabidopsis thaliana] gi|25345456|pir||C84612
hypothetical protein At2g22410 [imported] - Arabidopsis
thaliana
Length = 681
Score = 303 bits (777), Expect = 7e-81
Identities = 164/482 (34%), Positives = 276/482 (57%), Gaps = 9/482 (1%)
Query: 23 HAHILRCRRINHIAPL-LSAAAATSNFSYARSIFLHLTHRNTFIHNTMIRAYLLHAPSPA 81
H LR ++H+ + A+ + AR +F R+ N +I Y +
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 82 PALSCYSSMLRTGITVNNYTFPPLIKASLALLSSSSSSNFTGRLVHGHVVKFGFHDDPYV 141
A+ Y M G+ ++ T L+ +S ++L + G+ + +V + G +
Sbjct: 241 -AIYVYKLMESEGVKPDDVTMIGLV-SSCSMLGDLNR----GKEFYEYVKENGLRMTIPL 294
Query: 142 VSGFIEFYCASRQLQTARLLFDQTTEKDVVLWTAMIDGYGKVGDVESARELFEEMPERNA 201
V+ ++ + + AR +FD ++ +V WT MI GY + G ++ +R+LF++M E++
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 202 VSWSAMMAAYSRVSDFKQVLALFEEMQNRGMKPNDSVLVTVLTACAHLGALTQGLWVHSY 261
V W+AM+ + + LALF+EMQ KP++ ++ L+AC+ LGAL G+W+H Y
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 262 AKRCKVDSNPILATALVDMYSKCGCVESALTVFEGIADKDAGAWNAMISGVALSGDVRKS 321
++ + N L T+LVDMY+KCG + AL+VF GI +++ + A+I G+AL GD +
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 322 LELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGLRLFEEMSCTYGVEPRGEHYACVVD 381
+ F++M G P E TF+ +L+AC HGGM+ G F +M + + P+ +HY+ +VD
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 382 LLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRIYKNVDVGNRVWKKMIDKGVADC 441
LL RAG+++EA++ ME M +EAD VWGA+L CR++ NV++G + KK+++ +D
Sbjct: 535 LLGRAGLLEEADRLMESMP--MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 592
Query: 442 GTHILTYNMYREAGWDAEAKRVRSMVSEAGMKKKPGCSIIEVGDEVEEFLAGDHSHPQAQ 501
G ++L MY EA +AKR R M++E G++K PGCS IEV V EF+ D S P+++
Sbjct: 593 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 652
Query: 502 EL 503
++
Sbjct: 653 KI 654
Score = 146 bits (368), Expect = 2e-33
Identities = 118/480 (24%), Positives = 208/480 (42%), Gaps = 90/480 (18%)
Query: 4 NNLTSLVKKCKTLTQLKQVHAHILRCRRINHIAPLLS-------AAAATSNFSYARSIFL 56
N L SL++KCK L LKQ+ A ++ I + P S A + + Y+ I
Sbjct: 54 NPLLSLLEKCKLLLHLKQIQAQMIINGLI--LDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 57 HLTHRNTFIHNTMIRAYLLHAPSPAPALSCYSSMLRTGITVN---NYTFPPLIKASLALL 113
+ + N F N IR + + +P + Y MLR G + ++T+P L K L
Sbjct: 112 GIENPNIFSWNVTIRGFS-ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR 170
Query: 114 SSSSSSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQTTEKDVVLW 173
SS G ++ GHV+K +V + I + + ++ AR +FD++ +D+V W
Sbjct: 171 LSS-----LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSW 225
Query: 174 TAMIDGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALFEEMQNRGMK 233
+I+GY K+G+ E A + +++ M++ G+K
Sbjct: 226 NCLINGYKKIGEAEKA-------------------------------IYVYKLMESEGVK 254
Query: 234 PNDSVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVDMYSKCGCVESALTV 293
P+D ++ ++++C+ LG L +G + Y K + L AL+DM+SKCG + A +
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 294 FEGI-------------------------------ADKDAGAWNAMISGVALSGDVRKSL 322
F+ + +KD WNAMI G + + +L
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDAL 374
Query: 323 ELFHQMAAHGTQPTETTFVAVLTACTHGGMVHQGL---RLFEEMSCTYGVEPRGEHYACV 379
LF +M T+P E T + L+AC+ G + G+ R E+ S + V +
Sbjct: 375 ALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALG----TSL 430
Query: 380 VDLLSRAGMVKEAEKFMEKMGGLVEADLNVWGAILNACRIYKNVDVGNRVWKKMIDKGVA 439
VD+ ++ G + EA + G+ + + AI+ ++ + + +MID G+A
Sbjct: 431 VDMYAKCGNISEA---LSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA 487
>dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
Length = 573
Score = 300 bits (768), Expect = 7e-80
Identities = 164/474 (34%), Positives = 269/474 (56%), Gaps = 19/474 (4%)
Query: 49 SYARSIFLHLTHRN--TFIHNTMIRAYLLHAPSPA--PALSCYSSMLRTGITVNNYTFPP 104
+YA IF H+ H +F+ N +IRA + + SP +S Y M ++ + +TFP
Sbjct: 9 AYANPIF-HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 105 LIKASLALLSSSSSSNFTGRLVHGHVVKFGFHDDPYVVSGFIEFYCASRQLQTARLLFDQ 164
L+ + L G+ H ++ FG DP+V + + Y + L++A+ +FD
Sbjct: 68 LLPSFHNPLHLP-----LGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDD 122
Query: 165 TTEKDVVLWTAMIDGYGKVGDVESARELFEEMPERNAVSWSAMMAAYSRVSDFKQVLALF 224
+ KD+ W ++++ Y K G ++ AR+LF+EMPERN +SWS ++ Y +K+ L LF
Sbjct: 123 SGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLF 182
Query: 225 EEMQ-----NRGMKPNDSVLVTVLTACAHLGALTQGLWVHSYAKRCKVDSNPILATALVD 279
EMQ ++PN+ + TVL+AC LGAL QG WVH+Y + V+ + +L TAL+D
Sbjct: 183 REMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALID 242
Query: 280 MYSKCGCVESALTVFEGI-ADKDAGAWNAMISGVALSGDVRKSLELFHQM-AAHGTQPTE 337
MY+KCG +E A VF + + KD A++AMI +A+ G + +LF +M + P
Sbjct: 243 MYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS 302
Query: 338 TTFVAVLTACTHGGMVHQGLRLFEEMSCTYGVEPRGEHYACVVDLLSRAGMVKEAEKFME 397
TFV +L AC H G++++G F+ M +G+ P +HY C+VDL R+G++KEAE F+
Sbjct: 303 VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 362
Query: 398 KMGGLVEADLNVWGAILNACRIYKNVDVGNRVWKKMIDKGVADCGTHILTYNMYREAGWD 457
M +E D+ +WG++L+ R+ ++ K++I+ + G ++L N+Y + G
Sbjct: 363 SMP--MEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRW 420
Query: 458 AEAKRVRSMVSEAGMKKKPGCSIIEVGDEVEEFLAGDHSHPQAQELCKLLDSIL 511
E K +R + G+ K PGCS +EV V EF+ GD S +++ + +LD I+
Sbjct: 421 MEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIM 474
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 838,202,015
Number of Sequences: 2540612
Number of extensions: 33131713
Number of successful extensions: 124425
Number of sequences better than 10.0: 1156
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 110238
Number of HSP's gapped (non-prelim): 4966
length of query: 519
length of database: 863,360,394
effective HSP length: 133
effective length of query: 386
effective length of database: 525,458,998
effective search space: 202827173228
effective search space used: 202827173228
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0252d.2