BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0239.15
(483 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171739.1| pentatricopeptide (PPR) repeat-containing prote... 354 4e-96
gb|AAL38889.1| unknown protein [Arabidopsis thaliana] 352 1e-95
emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana] gi|4... 326 1e-87
ref|NP_567220.1| pentatricopeptide (PPR) repeat-containing prote... 326 1e-87
gb|AAO42395.1| unknown protein [Arabidopsis thaliana] gi|2775449... 264 5e-69
dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa (japo... 259 1e-67
emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa (japonica cultivar... 246 9e-64
ref|NP_914092.1| P0682B08.20 [Oryza sativa (japonica cultivar-gr... 246 1e-63
ref|NP_171717.2| pentatricopeptide (PPR) repeat-containing prote... 236 1e-60
gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana] gi|20453... 235 2e-60
ref|XP_479023.1| putative DNA-binding protein [Oryza sativa (jap... 228 3e-58
gb|AAT99801.1| At2g20710 [Arabidopsis thaliana] gi|4454477|gb|AA... 226 2e-57
emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa (japonica cultivar... 223 1e-56
gb|AAO50594.1| unknown protein [Arabidopsis thaliana] gi|2839314... 214 4e-54
gb|AAO00924.1| Unknown protein [Arabidopsis thaliana] gi|1706473... 211 3e-53
emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana] gi|1... 210 7e-53
ref|NP_198098.1| pentatricopeptide (PPR) repeat-containing prote... 193 1e-47
dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa (japo... 191 4e-47
ref|NP_973492.1| pentatricopeptide (PPR) repeat-containing prote... 191 6e-47
gb|AAM93669.1| putative leaf protein [Oryza sativa (japonica cul... 189 1e-46
>ref|NP_171739.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|25518292|pir||A86154 hypothetical protein
T6A9.6 - Arabidopsis thaliana gi|9857533|gb|AAG00888.1|
Hypothetical protein [Arabidopsis thaliana]
Length = 537
Score = 354 bits (908), Expect = 4e-96
Identities = 205/472 (43%), Positives = 291/472 (61%), Gaps = 12/472 (2%)
Query: 19 TAVTEADRPAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRR 78
T+V ++ R LY++LS L TG + ++TL+Q+I EG K +L K LRK+RR
Sbjct: 59 TSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRR 118
Query: 79 FQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMN-KYTYGAL 137
Q A +I WME R + ++A+ LDL+ K +G+ AAENYFN+L P A N + TYGAL
Sbjct: 119 PQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGAL 178
Query: 138 LNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHDMKERNI 196
+NCYC EL KA AHF+ M+EL +V L FNN++ MYMRL QP KV LV MK+R I
Sbjct: 179 MNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGI 238
Query: 197 PMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAE 256
Y WM S +LNDL G+EKI + M + E K W T+SNLAAIY KA +EKA+
Sbjct: 239 SPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKAD 298
Query: 257 LMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLNVSYLCMISAL 315
L+ +E+ + P R+++H L+SLYAG +VY +W+SLK P V N+SYL M+ A+
Sbjct: 299 SALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAM 358
Query: 316 KRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFF 375
+L D++G+ + F EWES+ D+RL + I+ YL +M EEA + A+KKSKGPF
Sbjct: 359 SKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFS 418
Query: 376 KIREMFMIFFLEKCQLDGAVSHLEAALSEVV--GDEWRPTPRVLRAFVKYYKEETDLDGV 433
K R++ MI LE + D A+ HLEAA+S+ DEW + ++ F ++++ D+DG
Sbjct: 419 KARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGA 478
Query: 434 DELSKILMTHNFDDS----WLQSSIAAAE-SSPEIYPILNED--SVLENLQD 478
++ KIL DS +L + AAAE +SP++ L++ V E +QD
Sbjct: 479 EDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQD 530
>gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 352 bits (904), Expect = 1e-95
Identities = 204/472 (43%), Positives = 291/472 (61%), Gaps = 12/472 (2%)
Query: 19 TAVTEADRPAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRR 78
T+V ++ R LY++LS L TG + ++TL+Q+I EG K +L K LRK+RR
Sbjct: 59 TSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRR 118
Query: 79 FQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMN-KYTYGAL 137
Q A +I WME R + ++A+ LDL+ K +G+ AAENYFN+L P A N + TYGAL
Sbjct: 119 PQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGAL 178
Query: 138 LNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHDMKERNI 196
+NCYC EL KA AHF+ M+EL +V L FNN++ MYMRL QP KV LV +K+R I
Sbjct: 179 MNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAIKQRGI 238
Query: 197 PMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAE 256
Y WM S +LNDL G+EKI + M + E K W T+SNLAAIY KA +EKA+
Sbjct: 239 SPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKAD 298
Query: 257 LMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLNVSYLCMISAL 315
L+ +E+ + P R+++H L+SLYAG +VY +W+SLK P V N+SYL M+ A+
Sbjct: 299 SALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAM 358
Query: 316 KRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFF 375
+L D++G+ + F EWES+ D+RL + I+ YL +M EEA + A+KKSKGPF
Sbjct: 359 SKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFS 418
Query: 376 KIREMFMIFFLEKCQLDGAVSHLEAALSEVV--GDEWRPTPRVLRAFVKYYKEETDLDGV 433
K R++ MI LE + D A+ HLEAA+S+ DEW + ++ F ++++ D+DG
Sbjct: 419 KARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGA 478
Query: 434 DELSKILMTHNFDDS----WLQSSIAAAE-SSPEIYPILNED--SVLENLQD 478
++ KIL DS +L + AAAE +SP++ L++ V E +QD
Sbjct: 479 EDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQD 530
>emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
gi|4558568|gb|AAD22661.1| hypothetical protein
[Arabidopsis thaliana] gi|25407143|pir||E85025
hypothetical protein AT4g01990 [imported] - Arabidopsis
thaliana
Length = 501
Score = 326 bits (835), Expect = 1e-87
Identities = 191/480 (39%), Positives = 280/480 (57%), Gaps = 18/480 (3%)
Query: 11 RRLLRHLCTAVTEADRPA---------KGRSLYQRLSEL-EKTGMSASQTLDQYISEGKV 60
RR L TA E A K RS+Y++LS L + G +TL+Q++ EG
Sbjct: 9 RRFCATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVP 68
Query: 61 AGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENY 120
K +L+ K+LRK+R+ Q AL+I +WME + + ++A+ L+L+ K++G+ AAE Y
Sbjct: 69 VKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLEAAETY 128
Query: 121 FNSLPPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLG 179
FNSL N+ TYG+LLNCYC E KA AHF+ M +L +V+ L FNNL+ MYM LG
Sbjct: 129 FNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLG 188
Query: 180 QPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTY 239
QP KV LV MKE++I Y W+ S +L DL GVEK+ + MK E E W T+
Sbjct: 189 QPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTF 248
Query: 240 SNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKS 299
+NLAAIY+K + KAE L+ LE + P R+ YH L++LY G N +VY +WD LK
Sbjct: 249 ANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKK 308
Query: 300 VTP-VLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEE 358
P V N SYL M+ AL +L+D++G+ + F EWES D+R+ + IS+YL +M EE
Sbjct: 309 RYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEE 368
Query: 359 AALVFKDAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLR 418
A VF A+KK KG F K R++ M+ L+ Q D A+ H EAA+ + W + ++
Sbjct: 369 AEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVLD-QDKNWTWSSELIS 427
Query: 419 AFVKYYKEETDLDGVDELSKIL-----MTHNFDDSWLQSSIAAAESSPEIYPILNEDSVL 473
+F +++E D+DG +E K L ++ +++ +AA ++ P++ L E +L
Sbjct: 428 SFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGIL 487
>ref|NP_567220.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26
[Arabidopsis thaliana] gi|14517494|gb|AAK62637.1|
AT4g01990/T7B11_26 [Arabidopsis thaliana]
Length = 502
Score = 326 bits (835), Expect = 1e-87
Identities = 191/480 (39%), Positives = 280/480 (57%), Gaps = 18/480 (3%)
Query: 11 RRLLRHLCTAVTEADRPA---------KGRSLYQRLSEL-EKTGMSASQTLDQYISEGKV 60
RR L TA E A K RS+Y++LS L + G +TL+Q++ EG
Sbjct: 10 RRFCATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVP 69
Query: 61 AGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENY 120
K +L+ K+LRK+R+ Q AL+I +WME + + ++A+ L+L+ K++G+ AAE Y
Sbjct: 70 VKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLEAAETY 129
Query: 121 FNSLPPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLG 179
FNSL N+ TYG+LLNCYC E KA AHF+ M +L +V+ L FNNL+ MYM LG
Sbjct: 130 FNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLG 189
Query: 180 QPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTY 239
QP KV LV MKE++I Y W+ S +L DL GVEK+ + MK E E W T+
Sbjct: 190 QPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTF 249
Query: 240 SNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKS 299
+NLAAIY+K + KAE L+ LE + P R+ YH L++LY G N +VY +WD LK
Sbjct: 250 ANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKK 309
Query: 300 VTP-VLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEE 358
P V N SYL M+ AL +L+D++G+ + F EWES D+R+ + IS+YL +M EE
Sbjct: 310 RYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEE 369
Query: 359 AALVFKDAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLR 418
A VF A+KK KG F K R++ M+ L+ Q D A+ H EAA+ + W + ++
Sbjct: 370 AEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVLD-QDKNWTWSSELIS 428
Query: 419 AFVKYYKEETDLDGVDELSKIL-----MTHNFDDSWLQSSIAAAESSPEIYPILNEDSVL 473
+F +++E D+DG +E K L ++ +++ +AA ++ P++ L E +L
Sbjct: 429 SFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGIL 488
>gb|AAO42395.1| unknown protein [Arabidopsis thaliana] gi|27754491|gb|AAO22693.1|
unknown protein [Arabidopsis thaliana]
gi|15219808|ref|NP_176276.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|2462744|gb|AAB71963.1| Hypothetical protein
[Arabidopsis thaliana] gi|25404288|pir||B96633
hypothetical protein F8A5.28 [imported] - Arabidopsis
thaliana
Length = 491
Score = 264 bits (674), Expect = 5e-69
Identities = 156/473 (32%), Positives = 257/473 (53%), Gaps = 9/473 (1%)
Query: 14 LRHLCTAVTEADRPAKG---RSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIV 70
+RHL + R K LY RL + T + Q L+Q++ K K E+ +
Sbjct: 3 MRHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTI 62
Query: 71 KELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMN 130
K+LR + AL++ + ME R + + A+HLDLV K + A ENYF LP +
Sbjct: 63 KKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKT 122
Query: 131 KYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVH 189
+ TYG+LLNCYCKEL+ KA +KM EL + +S+N+L+ +Y + G+ KV ++
Sbjct: 123 ELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQ 182
Query: 190 DMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKA 249
++K N+ ++ Y+ WM + AA ND+ GVE++ E M + DW TYSN+A+IYV A
Sbjct: 183 ELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDA 242
Query: 250 KQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLNVSY 308
+KAE L++LE R AY L++LY G L +VY +W SL+ P NV+Y
Sbjct: 243 GLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAY 302
Query: 309 LCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIK 368
L MI L +LND+ G FKEW++ D+R+++ +I AY + ++A + + A +
Sbjct: 303 LNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPR 362
Query: 369 KSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGD--EWRPTPRVLRAFVKYYKE 426
+ K E+FM ++++ + A+ + A+S GD +W P+P +RA + Y+++
Sbjct: 363 RGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQ 422
Query: 427 ETDLDGVDELSKILM--THNFDDSWLQSSIAAAESSPEIYPILNEDSVLENLQ 477
+ D++G + L +IL T N + I ++ + +P + +EN++
Sbjct: 423 KKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVE 475
>dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 522
Score = 259 bits (662), Expect = 1e-67
Identities = 162/454 (35%), Positives = 263/454 (57%), Gaps = 16/454 (3%)
Query: 31 RSLYQRLSELEKTGM-SASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWM 89
RSLY+RLS L G S S+ +++++ EG+ A +L VKELRKY+R AL++M+WM
Sbjct: 55 RSLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWM 114
Query: 90 ESRVESPLDY-NYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVN 148
+ + Y N+A+ LDL+ K G+ AAE YF LP N TYGALLNCYC M +
Sbjct: 115 VNTKGMNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKMED 174
Query: 149 KALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWM 207
KA + KM+ELG + L NNL+ +Y+++GQ KV L +MK +N+ M
Sbjct: 175 KATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLM 234
Query: 208 NSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVK 267
+SYAALN + V ++ + M+ E + + W YS LA++YV A E+AE L+KLE +
Sbjct: 235 SSYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLID 293
Query: 268 PRK-REAYHCLLSLYAGTGNLEKVYSLWDSLK-SVTPVLNVSYLCMISALKRLNDMEGLI 325
+ R+ + L+SLYA GNL +V +W+ +K + V N SYL M+ AL +LND + +
Sbjct: 294 VQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMK 353
Query: 326 RCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFF--KIREMFMI 383
+ +++WES Y + D RL + + A+L + +++EA L+++ K KG F K E+F+
Sbjct: 354 QIYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKV--KEKGAEFDSKTCELFLE 411
Query: 384 FFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKILMTH 443
++ K + A++ +E ++++ + + + F+KY++E D++G + L T
Sbjct: 412 HYMGKGDMTSALNWVE-NMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLRTS 470
Query: 444 NFDD-----SWLQSSIAAAESSPEIYPILNEDSV 472
D S L++ +AA ++S I ++ ED +
Sbjct: 471 GCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKI 504
>emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa (japonica cultivar-group)]
gi|50922931|ref|XP_471826.1| OSJNBb0026L04.10 [Oryza
sativa (japonica cultivar-group)]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza
sativa (japonica cultivar-group)]
Length = 524
Score = 246 bits (629), Expect = 9e-64
Identities = 156/450 (34%), Positives = 234/450 (51%), Gaps = 41/450 (9%)
Query: 32 SLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMES 91
+LY+RL T + + +D ++ K A K E+ V+ LRK ++ AL++ + M
Sbjct: 20 ALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRPALKLSEVMAR 79
Query: 92 RVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNKAL 151
R +P + A+ LDLV K+ G+ AAE YF LP + TYGALLNCYCK+LM KA
Sbjct: 80 RGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAE 139
Query: 152 AHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSY 210
A KM EL + T + +N+L+ +Y ++ Q KV ++ DMK ++ + Y+ WM +
Sbjct: 140 ALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRAL 199
Query: 211 AALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRK 270
AA D+ GVE++ E MK + DW TYSNLA+IYV A FEKAE L++LE+
Sbjct: 200 AARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEKWNTSND 259
Query: 271 REAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLNVSYLCMISALKRLNDMEGLIRCFK 329
EAY L++LYA T NL +V+ +W SLK P N+SYL MI AL L D+ G CFK
Sbjct: 260 LEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACFK 319
Query: 330 EWESRY-------------------------------------GHCDLRLISAVISAYLS 352
EWE++Y D+R+ +A+I AY++
Sbjct: 320 EWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAMIKAYIT 379
Query: 353 HDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSE--VVGDEW 410
M ++A V K A + K E+FM +L++ L + A+ + G W
Sbjct: 380 EGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADRAIKKGHSAGRIW 439
Query: 411 RPTPRVLRAFVKYYKEETDLDGVDELSKIL 440
P V + Y+++ D+DG ++ ++L
Sbjct: 440 VPPHEVTETLMDYFEKNKDVDGAEKFVEVL 469
>ref|NP_914092.1| P0682B08.20 [Oryza sativa (japonica cultivar-group)]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein
[Oryza sativa (japonica cultivar-group)]
Length = 504
Score = 246 bits (627), Expect = 1e-63
Identities = 155/472 (32%), Positives = 263/472 (54%), Gaps = 17/472 (3%)
Query: 11 RRLLRHLCTAVTEADRPAKGR--SLYQRLS-ELEKTGMSASQTLDQYISEGKVAGKKELM 67
RR R L A E RP G +LY RLS L GM + L +++ E + +++++
Sbjct: 20 RRQARGLQYASPER-RPLDGARWALYARLSAHLPSGGMV--EELGRWLRERRPLSEEQVL 76
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPL 127
V+ RK+++ + ALQ+M WME+R + ++A+ LDLV K G+ AAE YF SLP +
Sbjct: 77 FCVRRFRKFKQNKHALQLMDWMEARGVNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDI 136
Query: 128 AMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHE 186
+K TY LLNCY + M K L ++ M + V+ L +NNL+ +Y++ QP K+
Sbjct: 137 FRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPT 196
Query: 187 LVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIY 246
V M+E I + F+Y SY +ND+ EK+ L +L+ + W Y+ LA Y
Sbjct: 197 TVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKV--LKELQEVNSVPWSLYATLANGY 254
Query: 247 VKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSV-TPVLN 305
K +QF+KAE L+K E+ + ++HCLLS YA +GNL +V +W+SLKS N
Sbjct: 255 NKLQQFDKAEFTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTN 314
Query: 306 VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKD 365
SYL M+ ALK+L+D + L + F+EWES + H D+++ + +I AYL M ++A + +
Sbjct: 315 RSYLVMLKALKKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQT 374
Query: 366 AIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYK 425
+ + ++ +F F+LEK +++ A+ + A V G +W P +++ ++K+++
Sbjct: 375 TMAQDHSN-YRTFCIFAEFYLEKSKMNEALQVWKDAKKMVKGQDWVP-EKLVNRYLKHFE 432
Query: 426 EETDLDGVDELSKIL-----MTHNFDDSWLQSSIAAAESSPEIYPILNEDSV 472
+ D+DG++ + L + ++ +++ I+ ++P I + D V
Sbjct: 433 DSKDVDGMETFCECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQRMEVDRV 484
>ref|NP_171717.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|2317908|gb|AAC24372.1| Unknown protein
[Arabidopsis thaliana]
Length = 524
Score = 236 bits (602), Expect = 1e-60
Identities = 148/460 (32%), Positives = 249/460 (53%), Gaps = 14/460 (3%)
Query: 32 SLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMES 91
++Y+++S +EK + A+ L+Q+ G+ K EL +VKELRKY+R AL++ WM +
Sbjct: 68 AIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNN 127
Query: 92 RVE----SPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMV 147
R E S D A+ LDL+ K G+ AE +F LP ++ YG+LLN Y +
Sbjct: 128 RGERFRLSASDA--AIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSR 185
Query: 148 NKALAHFDKMNELGYVTF-LSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAW 206
KA A + M + GY L FN ++ +YM L + KV +V +MK+++I + ++Y+ W
Sbjct: 186 EKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIW 245
Query: 207 MNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAV 266
++S +L + +E +Y+ MK +V +W T+S +A +Y+K + EKAE LRK+E +
Sbjct: 246 LSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARI 305
Query: 267 KPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLNVSYLCMISALKRLNDMEGLI 325
R R YH LLSLY GN +++Y +W KSV P + N+ Y ++S+L R+ D+EG
Sbjct: 306 TGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 365
Query: 326 RCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFF 385
+ ++EW D R+ + +++AY+ +D E A +F ++ P E+ +
Sbjct: 366 KVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGH 425
Query: 386 LEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKIL-MTHN 444
K + A++ L A S WRP +L F K +EE+D+ + + ++L + +
Sbjct: 426 TRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485
Query: 445 FDDSWLQSSIAAAE----SSPEIYPILNEDSVLENLQDDV 480
+D + I E ++ EI D++L LQDD+
Sbjct: 486 LEDKSYLALIDVDENRTVNNSEI-DAHETDALLTQLQDDL 524
>gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana] gi|20453085|gb|AAM19786.1|
At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 235 bits (600), Expect = 2e-60
Identities = 147/460 (31%), Positives = 249/460 (53%), Gaps = 14/460 (3%)
Query: 32 SLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMES 91
++Y+++S +EK + A+ L+Q+ G+ K EL +VKELRKY+R A+++ WM +
Sbjct: 68 AIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQAIEVYDWMNN 127
Query: 92 RVE----SPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMV 147
R E S D A+ LDL+ K G+ AE +F LP ++ YG+LLN Y +
Sbjct: 128 RGERFRLSASDA--AIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSR 185
Query: 148 NKALAHFDKMNELGYVTF-LSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAW 206
KA A + M + GY L FN ++ +YM L + KV +V +MK+++I + ++Y+ W
Sbjct: 186 EKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIW 245
Query: 207 MNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAV 266
++S +L + +E +Y+ MK +V +W T+S +A +Y+K + EKAE LRK+E +
Sbjct: 246 LSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARI 305
Query: 267 KPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLNVSYLCMISALKRLNDMEGLI 325
R R YH LLSLY GN +++Y +W KSV P + N+ Y ++S+L R+ D+EG
Sbjct: 306 TGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 365
Query: 326 RCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFF 385
+ ++EW D R+ + +++AY+ +D E A +F ++ P E+ +
Sbjct: 366 KVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGH 425
Query: 386 LEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKIL-MTHN 444
K + A++ L A S WRP +L F K +EE+D+ + + ++L + +
Sbjct: 426 TRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485
Query: 445 FDDSWLQSSIAAAE----SSPEIYPILNEDSVLENLQDDV 480
+D + I E ++ EI D++L LQDD+
Sbjct: 486 LEDKSYLALIDVDENRTVNNSEI-DAHETDALLTQLQDDL 524
>ref|XP_479023.1| putative DNA-binding protein [Oryza sativa (japonica
cultivar-group)] gi|34393591|dbj|BAC83218.1| putative
DNA-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 506
Score = 228 bits (581), Expect = 3e-58
Identities = 145/429 (33%), Positives = 229/429 (52%), Gaps = 8/429 (1%)
Query: 26 RPAKGRSLYQRLSELEKTGMSASQTLDQYISE-GKVAGKKELMSIVKELRKYRRFQDALQ 84
+PA+ SL L L G ++++ ++ G EL IVKELRK RR + AL+
Sbjct: 58 KPARPPSLQSTLWPLGHPGTLLVPEIERWAAKPGNRLRHVELERIVKELRKRRRHRQALE 117
Query: 85 IMKWMESRVESP-LDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCK 143
+ +WM ++ L ++AVHLDL+ + G AAE YFN+LP + YGALLNCY +
Sbjct: 118 VSEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTR 177
Query: 144 ELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFA 202
EL+V K+LAHF KM ELG+V + L +NN++G+Y LGQ KV ++ +MK I F+
Sbjct: 178 ELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFS 237
Query: 203 YHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKL 262
Y +NSY D G+E E M+ E + +DW TY+ +A+ Y+K EKA L+K
Sbjct: 238 YRICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKA 297
Query: 263 EQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWD-SLKSVTPVLNVSYLCMISALKRLNDM 321
E + + ++Y+ L+SLY G+ +V LW + + +N Y M++ L +LN++
Sbjct: 298 EAKINIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNEI 357
Query: 322 EGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMF 381
E KEWES D ++ + +++ Y D+ ++A + D +KK K P +
Sbjct: 358 EEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIV 417
Query: 382 MIFFLEKCQLDGAVSHLEAALSEVVGDE-WRPTPRVLRAFVKYYKEETDLDGVD---ELS 437
+ EK A + AL + W P P ++ +KY +E D++ V+ +L
Sbjct: 418 AAGYAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLL 477
Query: 438 KILMTHNFD 446
K+ + N D
Sbjct: 478 KVAVPLNSD 486
>gb|AAT99801.1| At2g20710 [Arabidopsis thaliana] gi|4454477|gb|AAD20924.1|
hypothetical protein [Arabidopsis thaliana]
gi|25411988|pir||D84592 hypothetical protein At2g20710
[imported] - Arabidopsis thaliana
gi|15225409|ref|NP_179663.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 226 bits (575), Expect = 2e-57
Identities = 133/412 (32%), Positives = 228/412 (55%), Gaps = 4/412 (0%)
Query: 32 SLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWM-E 90
+L +R++ S + LD ++ +G + EL SI+K LRK+ RF ALQI WM E
Sbjct: 39 TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98
Query: 91 SRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNKA 150
RV + + A+ LDL+ K G+ AE +F ++P N + YGALLNCY + +++KA
Sbjct: 99 HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158
Query: 151 LAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNS 209
F +M ELG++ L +N ++ +Y+R G+ V +L+ +M++ + F + +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218
Query: 210 YAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPR 269
Y+ ++D+ G+EK + + +DW TY++ A Y+KA EKA MLRK EQ V +
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278
Query: 270 KRE-AYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLCMISALKRLNDMEGLIRCF 328
KR+ AY L+S Y G E+VY LW K + N Y+ +ISAL +++D+E + +
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIM 338
Query: 329 KEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLEK 388
+EWE+ + D+R+ +I+ Y M E+A V ++K + E + +
Sbjct: 339 EEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMA 398
Query: 389 CQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKIL 440
+++ AV + A+ EV WRP VL + V Y + + D++G+ ++ ++L
Sbjct: 399 GKMEKAVEKWKRAI-EVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449
>emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa (japonica cultivar-group)]
gi|50927333|ref|XP_473385.1| OSJNBb0038F03.9 [Oryza
sativa (japonica cultivar-group)]
Length = 511
Score = 223 bits (568), Expect = 1e-56
Identities = 132/421 (31%), Positives = 223/421 (52%), Gaps = 5/421 (1%)
Query: 32 SLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMES 91
SLY+R++ + G +TL + + K EL I +ELRK+RRF ALQ+ WM
Sbjct: 77 SLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTE 135
Query: 92 RVE--SPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNK 149
R + S + A+ LDL+ K GV AE YF LP +K TYG+LLN Y + +M K
Sbjct: 136 RRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEK 195
Query: 150 ALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMN 208
+ F++M + G+ T L FN L+ Y+ + KV L+ +M ERN+ Y+ W+
Sbjct: 196 TESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIK 255
Query: 209 SYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKP 268
S AA+ D +E+++ M + +W TY+ LA++++K EKAE L++ E+
Sbjct: 256 SCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTG 315
Query: 269 RKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVL-NVSYLCMISALKRLNDMEGLIRC 327
R+++ +H L++LY+ G E+VY +W+ K+ P + N+ Y ++SAL RL D+EG
Sbjct: 316 REKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELL 375
Query: 328 FKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLE 387
++EW S+ D + ++ +++ Y +A ++K P E+ +L+
Sbjct: 376 YEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLK 435
Query: 388 KCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKILMTHNFDD 447
Q A+S LE A + +WRP P + + + +KE+ D + D L +L + ++
Sbjct: 436 DGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRCEE 495
Query: 448 S 448
+
Sbjct: 496 N 496
>gb|AAO50594.1| unknown protein [Arabidopsis thaliana] gi|28393142|gb|AAO42004.1|
unknown protein [Arabidopsis thaliana]
gi|22328859|ref|NP_680735.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 214 bits (546), Expect = 4e-54
Identities = 134/430 (31%), Positives = 224/430 (51%), Gaps = 8/430 (1%)
Query: 11 RRLLRHLCTAVTEADRPAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIV 70
RR+ +L + K +LY ++S L S L ++ GK EL+ IV
Sbjct: 5 RRIPANLIASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIV 64
Query: 71 KELRKYRRFQDALQIMKWMESR---VESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPL 127
+LR+ +RF AL++ KWM V SP ++ AVHLDL+ + G V AE YF +L
Sbjct: 65 HDLRRRKRFLHALEVSKWMNETGVCVFSPTEH--AVHLDLIGRVYGFVTAEEYFENLKEQ 122
Query: 128 AMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVTF-LSFNNLIGMYMRLGQPLKVHE 186
N TYGALLNCY ++ V K+L HF+KM E+G+VT L++NN++ +Y +GQ KV +
Sbjct: 123 YKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPK 182
Query: 187 LVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIY 246
++ +MKE N+ ++Y +N++ A+ DL + M+ + +DW TY+ A Y
Sbjct: 183 VLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFY 242
Query: 247 VKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLN 305
+ ++A +L+ E ++ + E Y+ L++LYA G +V LWD K V +N
Sbjct: 243 IDGGDCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRIN 302
Query: 306 VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKD 365
YL ++ +L +++ + EW+S D R+ + VI Y+ M E+A + +D
Sbjct: 303 QDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLED 362
Query: 366 AIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGD-EWRPTPRVLRAFVKYY 424
++ K + E+ + EK L+ A ++ AL VG +WRP ++ + + +
Sbjct: 363 LARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWV 422
Query: 425 KEETDLDGVD 434
+E L V+
Sbjct: 423 GDEGSLKEVE 432
>gb|AAO00924.1| Unknown protein [Arabidopsis thaliana] gi|17064738|gb|AAL32523.1|
Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 211 bits (538), Expect = 3e-53
Identities = 138/448 (30%), Positives = 238/448 (52%), Gaps = 8/448 (1%)
Query: 36 RLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVES 95
RL L T SA T+ ++ EG K EL IV+ELRK +R++ AL+I +WM + +
Sbjct: 66 RLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDI 125
Query: 96 PLDY-NYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNKALAHF 154
L +YAVHLDL+ K G+ +AE +F +P +LL+ Y + + +KA A F
Sbjct: 126 KLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALF 185
Query: 155 DKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAAL 213
+KM E G++ + L +N+++ MY+ GQ KV L+ ++K R P Y+ W+ ++A+
Sbjct: 186 EKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSP-DIVTYNLWLTAFASG 244
Query: 214 NDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREA 273
ND+ G EK+Y L E + DW+TYS L +Y K EKA L LR++E+ V + R A
Sbjct: 245 NDVEGAEKVY-LKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALREMEKLVSKKNRVA 303
Query: 274 YHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKEWE 332
Y L+SL+A G+ + V W +KS +N YL MISA+ +L + E + EWE
Sbjct: 304 YASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWE 363
Query: 333 SRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLEKCQLD 392
S G D R+ + +++ Y++ D ++ ++K P + E+ +L++ ++
Sbjct: 364 SVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDME 423
Query: 393 GAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKILMTHNFDDSWLQS 452
+ A+ V +W R+++ K +E+ ++ G ++L +L + ++ L +
Sbjct: 424 KVLDCFGKAIDSV--KKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYN 481
Query: 453 SIAAA-ESSPEIYPILNEDSVLENLQDD 479
S+ + E+ I+ E +N++ D
Sbjct: 482 SLLRTYAKAGEMALIVEERMAKDNVELD 509
>emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|15235508|ref|NP_192191.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|4263527|gb|AAD15353.1| hypothetical protein
[Arabidopsis thaliana] gi|25407157|pir||H85035
hypothetical protein AT4g02820 [imported] - Arabidopsis
thaliana
Length = 532
Score = 210 bits (535), Expect = 7e-53
Identities = 137/448 (30%), Positives = 238/448 (52%), Gaps = 8/448 (1%)
Query: 36 RLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVES 95
RL L T SA T+ ++ EG K EL IV+ELRK +R++ AL+I +WM + +
Sbjct: 66 RLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDI 125
Query: 96 PLDY-NYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNKALAHF 154
L +YAVHLDL+ K G+ +AE +F +P +LL+ Y + + +KA A F
Sbjct: 126 KLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALF 185
Query: 155 DKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAAL 213
+KM E G++ + L +N+++ MY+ GQ KV L+ ++K R P Y+ W+ ++A+
Sbjct: 186 EKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSP-DIVTYNLWLTAFASG 244
Query: 214 NDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREA 273
ND+ G EK+Y L E + DW+TYS L +Y K EKA L L+++E+ V + R A
Sbjct: 245 NDVEGAEKVY-LKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVA 303
Query: 274 YHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKEWE 332
Y L+SL+A G+ + V W +KS +N YL MISA+ +L + E + EWE
Sbjct: 304 YASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWE 363
Query: 333 SRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLEKCQLD 392
S G D R+ + +++ Y++ D ++ ++K P + E+ +L++ ++
Sbjct: 364 SVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDME 423
Query: 393 GAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKILMTHNFDDSWLQS 452
+ A+ V +W R+++ K +E+ ++ G ++L +L + ++ L +
Sbjct: 424 KVLDCFGKAIDSV--KKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYN 481
Query: 453 SIAAA-ESSPEIYPILNEDSVLENLQDD 479
S+ + E+ I+ E +N++ D
Sbjct: 482 SLLRTYAKAGEMALIVEERMAKDNVELD 509
>ref|NP_198098.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 491
Score = 193 bits (490), Expect = 1e-47
Identities = 122/401 (30%), Positives = 209/401 (51%), Gaps = 9/401 (2%)
Query: 40 LEKTGMSASQT--LDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPL 97
L K G S T L + I G EL I K L + R+ ALQ+M+WME++ +
Sbjct: 45 LRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEF 104
Query: 98 D-YNYAVHLDLVCKNEGVVAAENYFNSL----PPLAMNKYTYGALLNCYCKELMVNKALA 152
Y+ A+ LDL+ K G+ E YF L + + K Y LL Y K MV +A A
Sbjct: 105 SVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEA 164
Query: 153 HFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYA 211
+K+N LG+ VT FN ++ +Y GQ KV +V MK IP + +Y+ WMN+
Sbjct: 165 LMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACC 224
Query: 212 ALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKR 271
++ + VE +Y+ M + ++ W + LA +Y+K+ EKA L+L E+ + R
Sbjct: 225 EVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNR 284
Query: 272 EAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKE 330
Y L++LYA GN E V LW+ KSV ++ V+Y+C++S+L + D+E R F E
Sbjct: 285 LGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSE 344
Query: 331 WESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLEKCQ 390
WE++ + D+R+ + ++ AY+ + +A + +++ P +K E+ M +++
Sbjct: 345 WEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCEN 404
Query: 391 LDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLD 431
++ A+ + + WRP+ ++ A +Y+++E ++
Sbjct: 405 MEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIE 445
>dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 484
Score = 191 bits (485), Expect = 4e-47
Identities = 141/460 (30%), Positives = 229/460 (49%), Gaps = 21/460 (4%)
Query: 16 HLCTAVTEADRPAKGRSLYQRLSELEKTGMSASQTLDQYISEGK--VAGKKELMSIVKEL 73
H A + D+ GR L + L + G S S+ LD+++ EG+ +L ++L
Sbjct: 33 HAARAKGKKDKRPLGRRLLE-LGDAAGEG-SVSRVLDEWVREGREEAIAAADLAKCARDL 90
Query: 74 RKYRRFQDALQIMKWMESRVESPLDY-NYAVHLDLVCKNEGVVAAENYFNSLPPLA--MN 130
K +R AL++M WM + + Y YA+HL+L+ G+ AAE YF+ +P N
Sbjct: 91 HKVKRDAHALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQN 150
Query: 131 KYTYGALLNCYCKELMVNKALAHFDKMNELGYVTFLSF-NNLIGMYMRLGQPLKVHELVH 189
TYGALLNCYC M KA + +M+ELG + NNL+G+Y+ LGQ KV L
Sbjct: 151 HRTYGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFD 210
Query: 190 DMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKA 249
+MKERN+ M S+AA N + V++ + M L ++ W + L +IY+ A
Sbjct: 211 EMKERNVQPDELTCCILMRSHAAHNKIDTVKETFYNMSL-LDVPKQWSIFRTLGSIYMNA 269
Query: 250 KQFEKAELMLRKLEQAVK-PRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPV--LNV 306
E+AEL + ++ + R ++ L+ +A GNL V +W +K N
Sbjct: 270 GMVEEAELAFMRAQEFLGFDHGRHPFYFLMRQFASIGNLRGVNRVWKDIKMTFSYNRTNF 329
Query: 307 SYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDA 366
SYL M+ L +L D + + +KEWE RY + D RL + + A+L + M+ EA L++ +
Sbjct: 330 SYLLMLQCLYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLW-EK 388
Query: 367 IKKSKGPF-FKIREMFMIFFLEKCQLDGAVSHLE--AALSEVVGDEWRPTPRVLRAFVKY 423
+K+ G F F+ E+F +L K A+ E L + G + + T + F+K+
Sbjct: 389 VKERGGDFDFETCELFREHYLGKGDTTSALKWAEKMTKLPKKQGKQDQETCK----FLKW 444
Query: 424 YKEETDLDGVDELSKIL-MTHNFDDSWLQSSIAAAESSPE 462
++E+ ++G N D + +A A+ P+
Sbjct: 445 FEEDKVVEGAKSTCNCSNCLRNADSKTCEPLLAPADLLPD 484
>ref|NP_973492.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 395
Score = 191 bits (484), Expect = 6e-47
Identities = 111/353 (31%), Positives = 195/353 (54%), Gaps = 3/353 (0%)
Query: 90 ESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNK 149
E RV + + A+ LDL+ K G+ AE +F ++P N + YGALLNCY + +++K
Sbjct: 3 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 62
Query: 150 ALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMN 208
A F +M ELG++ L +N ++ +Y+R G+ V +L+ +M++ + F + ++
Sbjct: 63 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 122
Query: 209 SYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKP 268
+Y+ ++D+ G+EK + + +DW TY++ A Y+KA EKA MLRK EQ V
Sbjct: 123 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 182
Query: 269 RKRE-AYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLCMISALKRLNDMEGLIRC 327
+KR+ AY L+S Y G E+VY LW K + N Y+ +ISAL +++D+E + +
Sbjct: 183 QKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKI 242
Query: 328 FKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLE 387
+EWE+ + D+R+ +I+ Y M E+A V ++K + E + +
Sbjct: 243 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 302
Query: 388 KCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKIL 440
+++ AV + A+ EV WRP VL + V Y + + D++G+ ++ ++L
Sbjct: 303 AGKMEKAVEKWKRAI-EVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 354
>gb|AAM93669.1| putative leaf protein [Oryza sativa (japonica cultivar-group)]
gi|31432900|gb|AAP54476.1| putative leaf protein [Oryza
sativa (japonica cultivar-group)]
gi|37535774|ref|NP_922189.1| putative leaf protein
[Oryza sativa (japonica cultivar-group)]
Length = 545
Score = 189 bits (481), Expect = 1e-46
Identities = 120/419 (28%), Positives = 213/419 (50%), Gaps = 11/419 (2%)
Query: 29 KGRSLYQRLSELEKTGMSASQTLDQY-ISEGKVAGKKELMSIVKELRKYRRFQDALQIMK 87
K SL++R++ + S L+Q+ ++E + K E+ SI+K L + RRF ALQ+
Sbjct: 79 KKDSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSM 138
Query: 88 WMESRVE---SPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKE 144
WM R+ SP D Y L+L+ K G+ A YF+S+P + YG+LL CY +
Sbjct: 139 WMTERLHLHLSPGDVAY--RLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEA 196
Query: 145 LMVNKALAHFDKMNELGYVTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYH 204
V KA F+KM +G + ++N ++ +Y++ GQ +VH + M+E I F
Sbjct: 197 KCVEKAEELFEKMRGMGMASSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTD 256
Query: 205 AWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQ 264
+ +Y D+ +EK+ E + W +Y+ + + +++ E+A ++ E+
Sbjct: 257 TLVAAYVVAEDIEAIEKVLEKAD-TCNDLMTWHSYATIGKVLMQSGMEERALQAFQESEK 315
Query: 265 AV-KPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP--VLNVSYLCMISALKRLNDM 321
+ K R AY LL++YA G +V +WD KS P N Y+C IS L ++ND+
Sbjct: 316 KIAKKSNRVAYGFLLTMYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDI 375
Query: 322 EGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMF 381
G + ++EWES++ + D RLI+ +++AY + E+A + +KK + PF
Sbjct: 376 VGAEKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKL 435
Query: 382 MIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKIL 440
+ + Q A + AL+ +EW P + + Y+ E+ +++ +E++ +L
Sbjct: 436 AGGYFKVGQASKAADLTKKALAS-GSNEWTPDLTNVLMSLNYFAEQKNVEAAEEMASLL 493
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 784,167,761
Number of Sequences: 2540612
Number of extensions: 31155743
Number of successful extensions: 83988
Number of sequences better than 10.0: 640
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 534
Number of HSP's that attempted gapping in prelim test: 80864
Number of HSP's gapped (non-prelim): 2053
length of query: 483
length of database: 863,360,394
effective HSP length: 132
effective length of query: 351
effective length of database: 527,999,610
effective search space: 185327863110
effective search space used: 185327863110
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0239.15