BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0239.11
(307 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB63836.1| hypothetical protein [Arabidopsis thaliana] gi|15... 213 6e-54
gb|AAN08446.1| hypothetical protein [Arabidopsis thaliana] 211 3e-53
ref|NP_171758.1| expressed protein [Arabidopsis thaliana] 154 4e-36
ref|XP_614200.1| PREDICTED: similar to KIAA0614 protein [Bos tau... 39 0.25
ref|XP_590187.1| PREDICTED: similar to KIAA0614 protein [Bos tau... 39 0.25
ref|XP_428894.1| PREDICTED: similar to KIAA0614 protein, partial... 39 0.25
gb|AAO21676.1| NADH subunit 2 [Jenynsia maculata] 38 0.33
ref|XP_534683.1| PREDICTED: similar to KIAA0614 protein [Canis f... 36 1.2
gb|AAN23024.1| NADH dehydrogenase subunit 2 [Etheostoma obeyense] 36 1.6
ref|NP_443594.1| NADH dehydrogenase subunit 2 [Beryx splendens] ... 36 1.6
gb|AAN23031.1| NADH dehydrogenase subunit 2 [Etheostoma virgatum... 35 2.1
gb|AAP41554.1| NADH dehydrogenase subunit 2 [Ophiodon elongatus] 35 2.1
gb|AAN23030.1| NADH dehydrogenase subunit 2 [Etheostoma virgatum] 35 2.8
gb|AAN23029.1| NADH dehydrogenase subunit 2 [Etheostoma virgatum] 35 2.8
gb|AAF49773.3| CG9007-PA [Drosophila melanogaster] gi|24664023|r... 35 2.8
ref|NP_797237.1| ferrous iron transport protein B [Vibrio paraha... 35 3.6
gb|AAO21616.1| NADH subunit 2 [Aphanius iberus] 35 3.6
ref|NP_148752.1| NADH dehydrogenase subunit 2 [Arctoscopus japon... 35 3.6
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta... 34 4.7
ref|YP_220454.1| TraB [Micromonospora rosaria] gi|61106469|gb|AA... 34 4.7
>gb|AAB63836.1| hypothetical protein [Arabidopsis thaliana]
gi|15226580|ref|NP_182258.1| expressed protein
[Arabidopsis thaliana] gi|25370840|pir||C84914
hypothetical protein At2g47360 [imported] - Arabidopsis
thaliana
Length = 303
Score = 213 bits (542), Expect = 6e-54
Identities = 124/298 (41%), Positives = 175/298 (58%), Gaps = 45/298 (15%)
Query: 2 GRWQQKAKEFFSNHGGAPTPKATFHLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTLFL 61
G+W+++A++ F L+T TLLSLLLPLSF LL+ LS+A +F L
Sbjct: 6 GKWRKEAEQLVVK---------PFRLVTTTLLSLLLPLSFLLLSRLSSA-----SFLFSL 51
Query: 62 HSPQQQQQPFSFLFTLALQINPCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS 121
Q Q + F+F+L L+ NP I+Y +VS +S+ TL+ GL KIT D S P
Sbjct: 52 TKSQPQTESSFFVFSLFLRANPAIVYAVVSSISVYTLVLGLTTKITA-TDPKHSIAFYPH 110
Query: 122 LYIAWILLCAFQFCVGLGIEASIAAGIFEFDNSSSSSSSSFGESAAERSLLSKVFFLLGL 181
+ IAW+ L Q VG+G+E +I+ G+ +ER+ LS++ F GL
Sbjct: 111 VSIAWLTLFLVQISVGIGLETTISNGLI---------------IGSERNFLSRLVFFFGL 155
Query: 182 HETTQVWYRVVVRPVVDDTVFGG----AKKEKWIERVAVAASLGVLWWWRLREEVESLVV 237
HE +WYRV+VRPVVD+T+ GG ++E +ERVA+A S G LWWW+LR+EVE+LV
Sbjct: 156 HEVMLLWYRVIVRPVVDNTLLGGEDGQRREETVVERVALAVSCGTLWWWKLRDEVEALVG 215
Query: 238 MAEAKKSEQF-----GELELK------DFIGWWLYYVTVTIGMVRIVKGLMWMFMVAL 284
+AEAK++ G + + DF+ WWLYY+ VTIGMVRI+KG +W M+ L
Sbjct: 216 VAEAKRALLLLLPIDGNVNVSFDVGTVDFVNWWLYYMVVTIGMVRIIKGSLWFGMILL 273
>gb|AAN08446.1| hypothetical protein [Arabidopsis thaliana]
Length = 303
Score = 211 bits (536), Expect = 3e-53
Identities = 123/298 (41%), Positives = 173/298 (57%), Gaps = 45/298 (15%)
Query: 2 GRWQQKAKEFFSNHGGAPTPKATFHLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTLFL 61
G+W+++A++ F L+T TLLSLLLP SF LL+ LS+A +F L
Sbjct: 6 GKWRKEAEQLVVK---------PFRLVTTTLLSLLLPXSFLLLSRLSSA-----SFLFSL 51
Query: 62 HSPQQQQQPFSFLFTLALQINPCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS 121
Q Q + F+F L L+ NP I+Y +VS +S+ TL+ GL KIT D S P
Sbjct: 52 TKSQPQTESSFFVFXLFLRANPAIVYAVVSSISVYTLVLGLTTKITA-TDPKHSIAFYPH 110
Query: 122 LYIAWILLCAFQFCVGLGIEASIAAGIFEFDNSSSSSSSSFGESAAERSLLSKVFFLLGL 181
+ IAW+ L Q VG+G+E +I+ G+ +ER+ LS++ F GL
Sbjct: 111 VSIAWLTLFLVQISVGIGLETTISNGLI---------------IGSERNFLSRLVFFFGL 155
Query: 182 HETTQVWYRVVVRPVVDDTVFGG----AKKEKWIERVAVAASLGVLWWWRLREEVESLVV 237
HE +WYRV+VRPVVD+T+ GG ++E +ERVA+A S G LWWW+LR+EVE+LV
Sbjct: 156 HEVMLLWYRVIVRPVVDNTLLGGEDGQRREETVVERVALAVSCGTLWWWKLRDEVEALVG 215
Query: 238 MAEAKKSEQF-----GELELK------DFIGWWLYYVTVTIGMVRIVKGLMWMFMVAL 284
+AEAK++ G + + DF+ WWLYY+ VTIGMVRI+KG +W M+ L
Sbjct: 216 VAEAKRALLLLLPIDGNVNVSFDVGTVDFVNWWLYYMVVTIGMVRIIKGSLWFGMILL 273
>ref|NP_171758.1| expressed protein [Arabidopsis thaliana]
Length = 431
Score = 154 bits (388), Expect = 4e-36
Identities = 102/281 (36%), Positives = 150/281 (53%), Gaps = 51/281 (18%)
Query: 25 FHLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTLFLHSPQQQQQPFSFLFTLALQINPC 84
F +++I+LLSLL+PLSF L+ LS S S +F+L Q +
Sbjct: 20 FQMISISLLSLLVPLSFLFLSRLSV-------------SSSSAPVTVSGVFSLLHQADVG 66
Query: 85 ILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPSLYIAWILLCAFQFCVGLGIEASI 144
ILY ++S++ ++TLI+ L GK VL LYI WI+L Q CV GIE ++
Sbjct: 67 ILYTILSLIIVSTLIHILSGK-------PECSVLHSHLYICWIVLFIVQACVAFGIEGTM 119
Query: 145 AAGIFEFDNSSSSSSSSFGESAAERSLLSKVFFLLGLHETTQVWYRVVVRPVVDDTVFGG 204
+ I S + SF +A ER VVV+PV+DDTVFG
Sbjct: 120 STTI------SIDTDKSFSLAAQER---------------------VVVKPVIDDTVFGV 152
Query: 205 -AKKEKWIERVAVAASLGVLWWWRLREEVESLVVMAEAKKSEQFGELELKDFIGWWLYYV 263
++E+W ER VA + G++WWWRLR+EVESLVV+AE K++ Q LE DF+ WW+YY+
Sbjct: 153 YVEEERWSERAVVAVTFGLMWWWRLRDEVESLVVVAEVKRNLQI-RLEGLDFVNWWMYYI 211
Query: 264 TVTIGM--VRIVKGLMWMFMVALCRRRVTEVPVSPVVESSL 302
V IG+ V ++ ++++ +V ++ P V+ S L
Sbjct: 212 CVGIGLADVGVLYTILFLIIVFTLIHSLSGKPECSVLHSHL 252
Score = 145 bits (366), Expect = 1e-33
Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 15/224 (6%)
Query: 85 ILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPSLYIAWILLCAFQFCVGLGIEASI 144
+LY ++ ++ + TLI+ L GK VL LYI WI+L Q C GI+ ++
Sbjct: 222 VLYTILFLIIVFTLIHSLSGK-------PECSVLHSHLYICWIVLFIAQACA-FGIKRTM 273
Query: 145 AAGIFEFDNSSSSSSSSFGESAAERSLLSKVFFLLGLHETTQVWYRVVVRPVVDDTVFGG 204
+ + S + + + ER +L +V F LGLHE +W+RVVV+PVVD+T++G
Sbjct: 274 STTM------SINPDKNLFLATHERWMLVRVLFFLGLHEVMLMWFRVVVKPVVDNTIYGV 327
Query: 205 AKKEKWIERVAVAASLGVLWWWRLREEVESLVVMAEAKKSEQFGELELKDFIGWWLYYVT 264
+E+W ER VA + G++WWWRLR+EVESLVV+ A + LE +F+ W +YY+
Sbjct: 328 YVEERWSERAVVAVTFGIMWWWRLRDEVESLVVVVTADRLNLPIRLEGLNFVNWCMYYIC 387
Query: 265 VTIGMVRIVKGLM-WMFMVALCRRRVTEVPVSPVVESSLNDDKV 307
V IG+++I KG + ++ + L +R + S V + NDD V
Sbjct: 388 VGIGLMKIFKGFLDFVNTLTLSIKRSRKGCESCVFDDMCNDDHV 431
>ref|XP_614200.1| PREDICTED: similar to KIAA0614 protein [Bos taurus]
Length = 1120
Score = 38.5 bits (88), Expect = 0.25
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 27 LLTITLLSLLLPLSFFLLASLSAAKHYLQTFTLFLHSPQQQQQPFSFLFTLALQINPCIL 86
L T + + + L F LLA L L+T +HS +Q++ P ++ALQ+NPC+
Sbjct: 480 LWTTDMAACVKELVFHLLAEL------LRT----VHSLEQRKHPAGLSSSIALQLNPCLA 529
Query: 87 YVLVSIVSIATLIN------------GLMGKITLLNDSSTS----PVLQPSLYIAWILLC 130
++ + L + G G + S +++ L +A + L
Sbjct: 530 MLMALQSELHKLYDEETQSWVSGSACGGSGATAAADQGRFSTYFHALMEGCLAVAEVTLP 589
Query: 131 AFQFCVGLGIEASIAAGIFEFDNSSSSSSSSFGESAAERSLLSK 174
G+ ++ A + +SSSSSSSS G++ SLLSK
Sbjct: 590 TNMSVTASGVTSATAPNL---SDSSSSSSSSPGQTPQSPSLLSK 630
>ref|XP_590187.1| PREDICTED: similar to KIAA0614 protein [Bos taurus]
Length = 1087
Score = 38.5 bits (88), Expect = 0.25
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 27 LLTITLLSLLLPLSFFLLASLSAAKHYLQTFTLFLHSPQQQQQPFSFLFTLALQINPCIL 86
L T + + + L F LLA L L+T +HS +Q++ P ++ALQ+NPC+
Sbjct: 447 LWTTDMAACVKELVFHLLAEL------LRT----VHSLEQRKHPAGLSSSIALQLNPCLA 496
Query: 87 YVLVSIVSIATLIN------------GLMGKITLLNDSSTS----PVLQPSLYIAWILLC 130
++ + L + G G + S +++ L +A + L
Sbjct: 497 MLMALQSELHKLYDEETQSWVSGSACGGSGATAAADQGRFSTYFHALMEGCLAVAEVTLP 556
Query: 131 AFQFCVGLGIEASIAAGIFEFDNSSSSSSSSFGESAAERSLLSK 174
G+ ++ A + +SSSSSSSS G++ SLLSK
Sbjct: 557 TNMSVTASGVTSATAPNL---SDSSSSSSSSPGQTPQSPSLLSK 597
>ref|XP_428894.1| PREDICTED: similar to KIAA0614 protein, partial [Gallus gallus]
Length = 1405
Score = 38.5 bits (88), Expect = 0.25
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 52 HYLQTFTLFLHSPQQQQQPFSFLFTLALQINPCILYVLVSIVSIATLI-----NGLMGKI 106
H L +H+ +Q++ P ++ALQ+NPC+ ++ + L N + G
Sbjct: 664 HLLAELLRKIHNLEQKKSPAGLSSSIALQLNPCLAMLMALQSELHKLYDEETQNWVSGNA 723
Query: 107 TLLNDSSTSPVLQPSLYI-AWILLCAFQFCVGLGIEASIAAGIF------EFDNSSSSSS 159
+ + + S Y A + +C V L I S+ A + +SSSSSS
Sbjct: 724 CGGSGVGAADQGRFSTYFHALMEVCLAVAEVTLPINMSVTANVISSTSAPNLSDSSSSSS 783
Query: 160 SSFGESAAERSLLSK 174
SS G++ SLLSK
Sbjct: 784 SSPGQTPQSPSLLSK 798
>gb|AAO21676.1| NADH subunit 2 [Jenynsia maculata]
Length = 348
Score = 38.1 bits (87), Expect = 0.33
Identities = 49/170 (28%), Positives = 72/170 (41%), Gaps = 24/170 (14%)
Query: 26 HLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTL---FLHSPQQQQQPFSFLFTLALQIN 82
H LT TL++ L L L S LQ L + S Q+ PFS L LQI
Sbjct: 91 HPLTTTLVTFALALKIGLAPLHSWMPEVLQGLDLTTGLILSTWQKLAPFS----LILQIQ 146
Query: 83 PCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS--LYIAWILLCAFQFCVGLGI 140
P +L+ + +TLI G G LN + +L S ++ W++L QF L +
Sbjct: 147 PTNHNILIILGLTSTLIGGWGG----LNQTQLRKILAYSSIAHLGWMVLIV-QFSPALTL 201
Query: 141 EASIAAGI----------FEFDNSSSSSSSSFGESAAERSLLSKVFFLLG 180
A + + F + SS S+S+ +S A S+L + LG
Sbjct: 202 LALLTYFVMTFSLFLTFKLNFSTNISSLSTSWAKSPALTSMLPLMLLSLG 251
>ref|XP_534683.1| PREDICTED: similar to KIAA0614 protein [Canis familiaris]
Length = 3723
Score = 36.2 bits (82), Expect = 1.2
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 27 LLTITLLSLLLPLSFFLLASLSAAKHYLQTFTLFLHSPQQQQQPFSFLFTLALQINPCIL 86
L T + + + L F LLA L L+T +H+ +Q++ P ++ALQ+NPC+
Sbjct: 2408 LWTTDMAACVKELVFHLLAEL------LRT----VHALEQRKHPAGLSSSIALQLNPCLA 2457
Query: 87 YVLVSIVSIATLIN------------GLMGKITLLNDSSTS----PVLQPSLYIAWILLC 130
++ + L + G G + S +++ L +A + L
Sbjct: 2458 MLMALQSELHKLYDEETQSWVSGSTCGGSGSAVTTDQGRFSTYFHALMEGCLAVAEVTLP 2517
Query: 131 AFQFCVGLGIEASIAAGIFEFDNSSSSSSSSFGESAAERSLLSK 174
G+ ++ + +SSSSSSSS G++ SLLSK
Sbjct: 2518 TNMSVTASGVTSTTTPNL---SDSSSSSSSSPGQTPQSPSLLSK 2558
>gb|AAN23024.1| NADH dehydrogenase subunit 2 [Etheostoma obeyense]
Length = 348
Score = 35.8 bits (81), Expect = 1.6
Identities = 47/170 (27%), Positives = 77/170 (44%), Gaps = 24/170 (14%)
Query: 26 HLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTL---FLHSPQQQQQPFSFLFTLALQIN 82
H L ITL++L L L L S LQ L + S Q+ PF+ L LQI
Sbjct: 91 HPLPITLITLALALKIGLAPVHSWLPEVLQGLDLSTGLILSTWQKLAPFALL----LQIQ 146
Query: 83 PCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS--LYIAWILLCAFQFCVGLGI 140
P VLV++ +TLI G G LN + +L S ++ W++L QF L +
Sbjct: 147 PANSTVLVALGLASTLIGGWGG----LNQTQLRKILAYSSIAHLGWMIL-VLQFSPSLTL 201
Query: 141 EASI--------AAGIFEFDNSS--SSSSSSFGESAAERSLLSKVFFLLG 180
+ + +F+ +NS+ ++ ++S+ ++ A +L + LG
Sbjct: 202 LTLLTYFVMTFSSFLVFKLNNSTNINTLATSWAKAPALTALTPLILLSLG 251
>ref|NP_443594.1| NADH dehydrogenase subunit 2 [Beryx splendens]
gi|16267152|dbj|BAB70288.1| NADH dehydrogenase subunit 2
[Beryx splendens]
Length = 348
Score = 35.8 bits (81), Expect = 1.6
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 24/170 (14%)
Query: 26 HLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTL---FLHSPQQQQQPFSFLFTLALQIN 82
H L IT+++L L L L S LQ L + S Q+ PF+ L LQI
Sbjct: 91 HPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALL----LQIQ 146
Query: 83 PCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS--LYIAWILLCAFQFCVGLGI 140
P ++++ ++TL+ G G LN + +L S ++ W++L QF L +
Sbjct: 147 PANPTTMIALGLMSTLVGGWGG----LNQTQLRKILAYSSIAHLGWMIL-IIQFNPSLTL 201
Query: 141 EASIAAGI--------FEFDNSS--SSSSSSFGESAAERSLLSKVFFLLG 180
A + I F+ +NS+ ++ ++S+ +S A +L+ V LG
Sbjct: 202 LALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPALTALMPLVLLSLG 251
>gb|AAN23031.1| NADH dehydrogenase subunit 2 [Etheostoma virgatum]
gi|23321063|gb|AAN23028.1| NADH dehydrogenase subunit 2
[Etheostoma virgatum]
Length = 348
Score = 35.4 bits (80), Expect = 2.1
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 26 HLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTL---FLHSPQQQQQPFSFLFTLALQIN 82
H L ITL++L L L L S LQ L + S Q+ PF+ L LQI
Sbjct: 91 HPLPITLITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALL----LQIQ 146
Query: 83 PCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS--LYIAWILLCAFQFCVGLGI 140
P +L+++ +TLI G G LN + VL S ++ W++L QF L +
Sbjct: 147 PANSVILMALGLASTLIGGWGG----LNQTQLRKVLAYSSIAHLGWMIL-VLQFSPSLTL 201
Query: 141 EASIAAG--------IFEFDNSSSSS--SSSFGESAAERSLLSKVFFLLG 180
A + +F+ + S+S + ++S+ ++ A +L + LG
Sbjct: 202 LALLTYFVMTLSTFLVFKLNKSTSINMLATSWAKAPAITALAPLILLSLG 251
>gb|AAP41554.1| NADH dehydrogenase subunit 2 [Ophiodon elongatus]
Length = 348
Score = 35.4 bits (80), Expect = 2.1
Identities = 48/170 (28%), Positives = 75/170 (43%), Gaps = 24/170 (14%)
Query: 26 HLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTL---FLHSPQQQQQPFSFLFTLALQIN 82
H L ITL++L L L L S LQ L + S Q+ PF+ L LQI
Sbjct: 91 HPLPITLITLALALKVGLAPLHSWLPEVLQGLDLTTGLILSTWQKLAPFALL----LQIQ 146
Query: 83 PCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS--LYIAWILLCAFQFCVGLGI 140
P +L+++ ++TL+ G G LN + +L S ++ W++L QF L +
Sbjct: 147 PANSTLLIALGLMSTLVGGWGG----LNQTQLRKILAYSSIAHLGWMVL-VMQFSPSLTL 201
Query: 141 EASIAAGIFEFD-------NSS---SSSSSSFGESAAERSLLSKVFFLLG 180
+ I F NSS ++ ++S+ ++ A SL V LG
Sbjct: 202 LTLLTYLIMTFSTFLVFKLNSSTNINALATSWAKAPALTSLTPLVLLSLG 251
>gb|AAN23030.1| NADH dehydrogenase subunit 2 [Etheostoma virgatum]
Length = 348
Score = 35.0 bits (79), Expect = 2.8
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 26 HLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTL---FLHSPQQQQQPFSFLFTLALQIN 82
H L ITL++L L L L S LQ L + S Q+ PF+ L LQI
Sbjct: 91 HPLPITLITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALL----LQIQ 146
Query: 83 PCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS--LYIAWILLCAFQFCVGLGI 140
P +L++ +TL+ G G LN + +L S ++ W++L QF L +
Sbjct: 147 PANSNILIAFGLASTLVGGWGG----LNQTQLRKILAYSSIAHLGWMIL-VLQFSPSLTL 201
Query: 141 EASI--------AAGIFEFDNSSSSS--SSSFGESAAERSLLSKVFFLLG 180
+ + +F+ +NS+S + ++S+ ++ A +L + LG
Sbjct: 202 LTLLTYLVMTFSSFLVFKLNNSTSINMLATSWAKAPALTALAPLILLSLG 251
>gb|AAN23029.1| NADH dehydrogenase subunit 2 [Etheostoma virgatum]
Length = 348
Score = 35.0 bits (79), Expect = 2.8
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 26 HLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTL---FLHSPQQQQQPFSFLFTLALQIN 82
H L ITL++L L L L S LQ L + S Q+ PF+ L LQI
Sbjct: 91 HPLPITLITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALL----LQIQ 146
Query: 83 PCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS--LYIAWILLCAFQFCVGLGI 140
P +L++ +TL+ G G LN + +L S ++ W++L QF L +
Sbjct: 147 PANSNILIAFGLTSTLVGGWGG----LNQTQLRKILAYSSIAHLGWMIL-VLQFSPSLTL 201
Query: 141 EASI--------AAGIFEFDNSSSSS--SSSFGESAAERSLLSKVFFLLG 180
+ + +F+ +NS+S + ++S+ ++ A +L + LG
Sbjct: 202 LTLLTYLVMTFSSFLVFKLNNSTSINMLATSWDKAPALTALAPMILLSLG 251
>gb|AAF49773.3| CG9007-PA [Drosophila melanogaster] gi|24664023|ref|NP_648681.1|
CG9007-PA [Drosophila melanogaster]
Length = 3146
Score = 35.0 bits (79), Expect = 2.8
Identities = 25/66 (37%), Positives = 34/66 (50%), Gaps = 1/66 (1%)
Query: 131 AFQFCVGLGIEASIAAGIFEFDNSSSSSSSSFGESAAERSLLSKVFFLLGLHETTQVWYR 190
A Q +GLG+ A++AAG NS + S+SS GES ++ L S L L T V
Sbjct: 1350 AIQLTMGLGVGATVAAGASVLPNSRNRSTSSSGES-SQMGLNSPQLGQLNLGFKTSVTAT 1408
Query: 191 VVVRPV 196
+ PV
Sbjct: 1409 SLTAPV 1414
>ref|NP_797237.1| ferrous iron transport protein B [Vibrio parahaemolyticus RIMD
2210633] gi|28805844|dbj|BAC59121.1| ferrous iron
transport protein B [Vibrio parahaemolyticus RIMD
2210633]
Length = 758
Score = 34.7 bits (78), Expect = 3.6
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 20/116 (17%)
Query: 85 ILYVLVSIVSIATLINGLMGKITLLNDSSTS----------PVLQPSLYIAWILLCAFQF 134
I++ L + +A + GL K TL SS S P LQ + W L +F
Sbjct: 451 IVFALYLLGIVAAIFTGLFLKHTLYPGSSDSLVMEMPDYELPTLQNVVIKTWQKLK--RF 508
Query: 135 CVGLGIEASIAAGIFEFDNSSSSSSSSFGESAAERSLLSK-------VFFLLGLHE 183
+G G + I F NS + S FG +E S+LSK VF +G+ E
Sbjct: 509 VLGAGKTIVVVVAILSFLNSLGTDGS-FGNEDSENSVLSKAAQVVTPVFAPIGIQE 563
>gb|AAO21616.1| NADH subunit 2 [Aphanius iberus]
Length = 348
Score = 34.7 bits (78), Expect = 3.6
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 24/170 (14%)
Query: 26 HLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTL---FLHSPQQQQQPFSFLFTLALQIN 82
H L TL++L L L L + LQ L + S Q+ PF L LQ+
Sbjct: 91 HPLPTTLVTLALALKIGLAPLHAWMPEVLQGLDLTTGLILSTWQKLAPFC----LILQLQ 146
Query: 83 PCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS--LYIAWILLCAFQFCVGLGI 140
VL+ + ++TL+ G G LN + +L S ++ W++L QF L +
Sbjct: 147 HTNHQVLLILGLLSTLVGGWGG----LNQTQLRKILAYSSIAHLGWMIL-VLQFSPSLTL 201
Query: 141 EASIAAGIFEFD----------NSSSSSSSSFGESAAERSLLSKVFFLLG 180
+ I F + +S SSS+ ++ A S+L + FLLG
Sbjct: 202 VTLLTYFIMTFSLFLAFKLNHSTNINSLSSSWAKAPALTSILPLILFLLG 251
>ref|NP_148752.1| NADH dehydrogenase subunit 2 [Arctoscopus japonicus]
gi|14588607|dbj|BAB61799.1| NADH dehydrogenase subunit 2
[Arctoscopus japonicus]
Length = 348
Score = 34.7 bits (78), Expect = 3.6
Identities = 47/170 (27%), Positives = 74/170 (42%), Gaps = 24/170 (14%)
Query: 26 HLLTITLLSLLLPLSFFLLASLSAAKHYLQTFTL---FLHSPQQQQQPFSFLFTLALQIN 82
H L +TL++L L L L S LQ L + S Q+ PF+ L +QI
Sbjct: 91 HPLPVTLVTLALALKLGLAPIHSWLPEVLQGLDLTTGLILSTWQKLAPFALL----MQIQ 146
Query: 83 PCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPS--LYIAWILLCAFQFCVGLG- 139
P +L+ + +TL+ G G LN + +L S ++ W+LL QF L
Sbjct: 147 PANSTLLIVLGLASTLVGGWGG----LNQTQLRKILAYSSIAHLGWMLL-VLQFSPSLTF 201
Query: 140 -------IEASIAAGIFEFDNSSS--SSSSSFGESAAERSLLSKVFFLLG 180
+ S +F+ NS+S + ++S+ ++ A SL V LG
Sbjct: 202 ITLLTYILMTSSTFLVFKLTNSTSINALATSWAKAPAFTSLTPLVLLSLG 251
>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25411326|pir||C84488 hypothetical protein
At2g07730 [imported] - Arabidopsis thaliana
Length = 970
Score = 34.3 bits (77), Expect = 4.7
Identities = 23/67 (34%), Positives = 37/67 (54%), Gaps = 6/67 (8%)
Query: 218 ASLGVLWWWRLREEVESLVVMAEAKKSEQFGELE----LKDFIGWWLYYVTVTIGMVRIV 273
A+L L WWRL + E+L +KK + GE++ LK W + +VT+G+ +V
Sbjct: 508 ATLDSLDWWRLLHDKETLWARVLSKK-YKVGEMQNSNWLKPKSSWSSTWRSVTVGLREVV 566
Query: 274 -KGLMWM 279
KG+ W+
Sbjct: 567 AKGVRWV 573
>ref|YP_220454.1| TraB [Micromonospora rosaria] gi|61106469|gb|AAX38994.1| TraB
[Micromonospora rosaria]
Length = 553
Score = 34.3 bits (77), Expect = 4.7
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 214 VAVAASLGVLWWWRLREEVESLVVM 238
+ VAAS G +WWWR RE E LVV+
Sbjct: 76 IVVAASAG-MWWWRSRESFERLVVL 99
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 491,979,751
Number of Sequences: 2540612
Number of extensions: 18445112
Number of successful extensions: 77064
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 77034
Number of HSP's gapped (non-prelim): 43
length of query: 307
length of database: 863,360,394
effective HSP length: 127
effective length of query: 180
effective length of database: 540,702,670
effective search space: 97326480600
effective search space used: 97326480600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0239.11