BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0238.21
(630 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD31583.1| hypothetical protein [Arabidopsis thaliana] gi|25... 682 0.0
dbj|BAD46673.1| hypothetical protein [Oryza sativa (japonica cul... 512 e-143
ref|XP_478933.1| pentatricopeptide (PPR) repeat-containing prote... 383 e-104
gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gi|15... 366 1e-99
gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gi|15... 360 8e-98
ref|NP_909792.1| hypothetical protein [Oryza sativa (japonica cu... 352 2e-95
ref|NP_173907.1| pentatricopeptide (PPR) repeat-containing prote... 352 3e-95
emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa (japonica cultivar... 342 3e-92
gb|AAF79892.1| Contains similarity to an unknown protein F28A21.... 331 4e-89
ref|NP_173449.1| pentatricopeptide (PPR) repeat-containing prote... 331 4e-89
ref|XP_450548.1| putative pentatricopeptide (PPR) repeat-contain... 323 8e-87
gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa ... 321 4e-86
gb|AAF79473.1| F1L3.33 [Arabidopsis thaliana] gi|15220808|ref|NP... 318 3e-85
emb|CAC01699.1| putative protein [Arabidopsis thaliana] gi|15237... 315 2e-84
dbj|BAD67154.1| PPR868-14 [Physcomitrella patens] 313 8e-84
gb|AAD29807.1| unknown protein [Arabidopsis thaliana] gi|1522646... 310 1e-82
emb|CAE03042.2| OSJNBa0084A10.17 [Oryza sativa (japonica cultiva... 309 2e-82
emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana] gi|1... 308 4e-82
gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana] gi|15... 301 4e-80
gb|AAC73039.1| putative selenium-binding protein [Arabidopsis th... 293 1e-77
>gb|AAD31583.1| hypothetical protein [Arabidopsis thaliana] gi|25408519|pir||A84787
hypothetical protein At2g36980 [imported] - Arabidopsis
thaliana gi|15228064|ref|NP_181235.1| pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
Length = 625
Score = 682 bits (1760), Expect = 0.0
Identities = 333/618 (53%), Positives = 447/618 (71%), Gaps = 5/618 (0%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S L + TSKI SLA+SGRI AR++FD MP+ D+VAWN M+T+YS LGL+Q++++LF +
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
R S++KPD +S++A LS CA + FG I +LV+ SG+ +SLPV NSLIDMYGKC
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 126 HDARKVFDEMA--DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
A KVF +M NEVTWCSLLFAY N+ F AL+VF MP+RV AWN MI+GHA
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACT-ESRDMLYGCMVHGFVIKSGWSSAME 242
G++E+CL LFKEM ES ++PD +TFS+LMNAC+ +S +++YG MVH ++K+GWSSA+E
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 243 VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN 302
KNS+LSFY KL DAM S QVSWN+IIDA MK+G+T+KA F AP+KN
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHS 362
IV+WT+MI GY RNG+GE AL F++M ++ + D+ GAVLHAC+ LA+L HGKM+H
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 363 CIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANE 422
C+I G Y +VGN+LVN+YAKCGD++ + AF I KDLVSWN+MLFAFG+HG A++
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMV 482
A+ L+ M+ASG+KPD VTF G+L TCSH GL++EG F SM ++ + +DHV CM+
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 483 DMLGRGGYVAEAQSLAKKYSK--TSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEP 540
DM GRGG++AEA+ LA YS T + +S+E LLGAC H G V + LK EP
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEP 541
Query: 541 EKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP 600
+E+ +V+LSNLYC++G+WKE E VR+EM+++G+KK PG SWIE+ N V+ FV G++S P
Sbjct: 542 SEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHP 601
Query: 601 YMADISNILYFLEIEMRH 618
+ ++S L L+ EMR+
Sbjct: 602 RLEELSETLNCLQHEMRN 619
Score = 58.2 bits (139), Expect = 8e-07
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 5 RSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGS 64
+ Y + + + A+ G I A + F ++ ++D V+WN M+ A+ GL Q+L L+ +
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDN 428
Query: 65 MRISNSKPDSFSYSAALSACAGGSHHGF---GSVIHALVVVSGYRSSLPV--ANSLIDMY 119
M S KPD+ ++ L+ C SH G G +I +V YR L V +IDM+
Sbjct: 429 MIASGIKPDNVTFIGLLTTC---SHSGLVEEGCMIFE-SMVKDYRIPLEVDHVTCMIDMF 484
Query: 120 GK---CLKPHDARKVFDEMA--DSNEVTWCSLLFA 149
G+ + D + + SN +W +LL A
Sbjct: 485 GRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGA 519
>dbj|BAD46673.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 678
Score = 512 bits (1319), Expect = e-143
Identities = 267/615 (43%), Positives = 375/615 (60%), Gaps = 7/615 (1%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
L TS+I S R+G AR +FD MP RD+VAWNAM+TAY+ + +L+LF MR
Sbjct: 62 LAAATSRIASHGRAGDAAAARAVFDAMPRRDAVAWNAMLTAYARAARPRAALALFARMRA 121
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
PD+FS +AAL+A A G+ +H ++ G R+ LPV N+L+ MY KC + D
Sbjct: 122 ----PDAFSLTAALAAAAALRSPAAGAQLHGRLLRLGLRAPLPVGNALVSMYAKCARAAD 177
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
A + F EM + N ++WCSLL A+ S +A E+F MP + +AWNT++ GH+R G
Sbjct: 178 AARAFREMPERNALSWCSLLHAFVVSGHMELAHELFDEMPSKSNVAWNTLLMGHSRSGNA 237
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
+ CL LF +M S D T L++AC E D G +H V++SGW+ EV NS+
Sbjct: 238 KQCLALFNQMWMSGLTCDDATLCILVDACAELPDPSTGFAIHKVVVQSGWNGIPEVNNSL 297
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
+SFY K A+++F S SWN++IDAH + G ++A L F+ AP+ NI+SWT
Sbjct: 298 ISFYTKFSLLDCAVQIFESMKTRTTASWNSLIDAHARFGYIEQAALLFESAPETNIISWT 357
Query: 308 SMIVGYTRNGNGELALSMFLDM-TRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
+MI G+ RN AL+ F+ M T+ IQ D+ GAVLHACAS LA G+MVHSC +
Sbjct: 358 AMIGGFARNSLTSEALAHFVKMLTQEYIQPDDFTFGAVLHACASAPCLASGRMVHSCAFQ 417
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
G YL+V N+LV+MYAKCGD+EG+ F I +KDLVSWN+MLF F ++G EA+ +
Sbjct: 418 GGFASYLYVANNLVDMYAKCGDVEGANNVFDAIHQKDLVSWNTMLFGFAINGLPKEALEV 477
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG 486
+ M V PDEVTFTG+L CSH GL+++G AFF SM S G+ +H++C++DM
Sbjct: 478 YEIMTYHNVSPDEVTFTGLLTACSHSGLLEQGRAFFESMMSVHGVQPKPEHLSCVLDMYA 537
Query: 487 RGGYVAEAQSLAKKYSK-TSGARTNSYEVLLGACHAHG-DLGTGSSVGEYLKTLEPEKEV 544
R G +A+A + ++Y + + E LL C + D G VG+ + P ++
Sbjct: 538 RSGNIAKAIEMMEQYPEIVKSPGSGLSEALLSFCSSENLDFWVGRKVGDDVVARAPARDT 597
Query: 545 GYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMAD 604
GYVMLSNL CASG+W EAE VR+ M +QG+KK PG SWIE++ V FVS +
Sbjct: 598 GYVMLSNLLCASGRWDEAERVRRAMAEQGIKKSPGCSWIEVKGKVKVFVSSEQAIDLTDT 657
Query: 605 ISNILYFLEIEMRHT 619
+ ++Y L+ EMR++
Sbjct: 658 VYGLIYLLDYEMRNS 672
Score = 55.1 bits (131), Expect = 7e-06
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
SYL+ + + A+ G + A +FD + +D V+WN M+ ++ GL +++L ++ M
Sbjct: 422 SYLYVANNLVDMYAKCGDVEGANNVFDAIHQKDLVSWNTMLFGFAINGLPKEALEVYEIM 481
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGF----GSVIHALVVVSGYRSSLPVANSLIDMYGK 121
N PD +++ L+AC SH G + +++ V G + + ++DMY +
Sbjct: 482 TYHNVSPDEVTFTGLLTAC---SHSGLLEQGRAFFESMMSVHGVQPKPEHLSCVLDMYAR 538
Score = 39.3 bits (90), Expect = 0.39
Identities = 24/83 (28%), Positives = 36/83 (42%), Gaps = 4/83 (4%)
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFRE 429
D L S + + + GD + F + +D V+WN+ML A+ R A+ LF
Sbjct: 59 DGGLAAATSRIASHGRAGDAAAARAVFDAMPRRDAVAWNAMLTAYARAARPRAALALFAR 118
Query: 430 MVASGVKPDEVTFTGMLMTCSHL 452
M A PD + T L + L
Sbjct: 119 MRA----PDAFSLTAALAAAAAL 137
>ref|XP_478933.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa (japonica cultivar-group)]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR)
repeat-containing protein-like protein [Oryza sativa
(japonica cultivar-group)] gi|34393605|dbj|BAC83258.1|
pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa (japonica cultivar-group)]
Length = 808
Score = 383 bits (983), Expect = e-104
Identities = 216/621 (34%), Positives = 346/621 (54%), Gaps = 20/621 (3%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPD--RDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN 69
TS + + A +GR+ A FD +P RD+V NAM++A++ L ++S+F ++ S
Sbjct: 98 TSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 157
Query: 70 S-KPDSFSYSAALSACAGGSHHGFGSV----IHALVVVSGYRSSLPVANSLIDMYGKCLK 124
S +PD +S++A +SA G H + +H V+ SG + L V+N+LI +Y KC
Sbjct: 158 SLRPDDYSFTALISAV--GQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDT 215
Query: 125 PH---DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGH 181
P DARKV DEM D +++TW +++ Y A VF + + ++ WN MI+G+
Sbjct: 216 PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGY 275
Query: 182 ARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWS--- 238
+ G LF+ M D++TF+++++AC + ++G VHG +I+ +
Sbjct: 276 VQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVP 335
Query: 239 -SAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
+A+ V N++++ Y+K A +F++ + VSWN I+ ++ G KA F+
Sbjct: 336 EAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKV 395
Query: 298 APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ-LDNLVAGAVLHACASLAILAH 356
P KN +SW M+ GY G E AL +F M ++ D AGA+ AC L L H
Sbjct: 396 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIA-ACGELGALKH 454
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGL 416
G+ +H+ +++ G + GN+L+ MYAKCG + + L F + D VSWN+M+ A G
Sbjct: 455 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 514
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD 476
HG EA+ LF +MVA G+ PD ++F +L C+H GL+DEGF +F SM +FG+S G D
Sbjct: 515 HGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGED 574
Query: 477 HVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLK 536
H A ++D+LGR G + EA+ L K + + +E +L C +GD+ G+ + L
Sbjct: 575 HYARLIDLLGRSGRIGEARDLIK--TMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLF 632
Query: 537 TLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGN 596
+ P+ + Y++LSN Y A+G+W +A VRK M D+GVKK PG SWIE+ + + F+ G+
Sbjct: 633 RMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGD 692
Query: 597 NSSPYMADISNILYFLEIEMR 617
P ++ L + MR
Sbjct: 693 TKHPEAQEVYQFLEVIGARMR 713
Score = 123 bits (309), Expect = 2e-26
Identities = 95/387 (24%), Positives = 163/387 (41%), Gaps = 74/387 (19%)
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE--------- 196
L+ Y S +FRS P+ +A +++A HA G + F
Sbjct: 69 LIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTV 128
Query: 197 -------------------------MCESLYQPDQWTFSALMNACTESRDML--YGCMVH 229
+ +PD ++F+AL++A + ++ + +H
Sbjct: 129 LHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLH 188
Query: 230 GFVIKSGWSSAMEVKNSILSFYAKLECPS---DAMEMFNSFGAFNQVSWNAIIDAHMKLG 286
V+KSG ++ + V N++++ Y K + P DA ++ + + ++W ++ +++ G
Sbjct: 189 CSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRG 248
Query: 287 DTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLH 346
D A F++ K V W +MI GY ++G A +F M + LD +VL
Sbjct: 249 DVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLS 308
Query: 347 ACASLAILAHGKMVHSCIIRRG----LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK 402
ACA+ HGK VH IIR + L V N+LV +Y+K G + + F + K
Sbjct: 309 ACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK 368
Query: 403 DLVSWNSMLFAF------------------------------GLHGRANE-AMCLFREMV 431
D+VSWN++L + +HG +E A+ LF +M
Sbjct: 369 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 428
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEG 458
A VKP + T+ G + C LG + G
Sbjct: 429 AEDVKPCDYTYAGAIAACGELGALKHG 455
>gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|15225445|ref|NP_178983.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|25345462|pir||H84508 hypothetical protein At2g13600
[imported] - Arabidopsis thaliana
Length = 697
Score = 366 bits (940), Expect = 1e-99
Identities = 206/617 (33%), Positives = 330/617 (53%), Gaps = 40/617 (6%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
++ S + L + G + A LF MP+RD WN+M++ ++ +++L F M
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+ +S+++ LSAC+G + G +H+L+ S + S + + ++L+DMY KC +D
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
A++VFDEM D N V+ WN++I + G
Sbjct: 206 AQRVFDEMGDRNVVS-------------------------------WNSLITCFEQNGPA 234
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG-WSSAMEVKNS 246
L +F+ M ES +PD+ T +++++AC + G VHG V+K+ + + + N+
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNA 294
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
+ YAK +A +F+S N ++ ++I + T+ A L F + ++N+VSW
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSW 354
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
++I GYT+NG E ALS+F + R S+ + +L ACA LA L G H +++
Sbjct: 355 NALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK 414
Query: 367 RGL------DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRA 420
G + +FVGNSL++MY KCG +E L F ++E+D VSWN+M+ F +G
Sbjct: 415 HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 421 NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
NEA+ LFREM+ SG KPD +T G+L C H G ++EG +F SM+ +FG++ DH C
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTC 534
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEP 540
MVD+LGR G++ EA+S+ ++ + + LL AC H ++ G V E L +EP
Sbjct: 535 MVDLLGRAGFLEEAKSMIEEMPMQPDSVI--WGSLLAACKVHRNITLGKYVAEKLLEVEP 592
Query: 541 EKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP 600
YV+LSN+Y G+W++ VRK M +GV K PG SWI+I+ F+ + S P
Sbjct: 593 SNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHP 652
Query: 601 YMADISNILYFLEIEMR 617
I ++L L EMR
Sbjct: 653 RKKQIHSLLDILIAEMR 669
Score = 173 bits (438), Expect = 2e-41
Identities = 121/476 (25%), Positives = 213/476 (44%), Gaps = 81/476 (17%)
Query: 69 NSKPDSFSYSAALSACAGGSHHG-FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+S DS ++ L +C + +HA V+ SG+ + + + N LID Y KC D
Sbjct: 14 SSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLED 73
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
R+VFD+M N TW S++ A +FRSMPER + WN+M++G A+
Sbjct: 74 GRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
E L F M + + ++++F+++++AC+ DM G VH + KS + S + + +++
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
+ Y+K +DA +F+ G N VSWN
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWN------------------------------- 222
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
S+I + +NG AL +F M + ++ D + +V+ ACASL+ + G+ VH +++
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 368 G-LDKYLFVGNSLVNMYAKCGDL-------------------------------EGSALA 395
L + + N+ V+MYAKC + + + L
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS----- 450
F + E+++VSWN+++ + +G EA+ LF + V P +F +L C+
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Query: 451 HLGL------IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
HLG+ + GF F + + + ++DM + G V E + +K
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNS------LIDMYVKCGCVEEGYLVFRK 452
>gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|15227144|ref|NP_179798.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|25345463|pir||F84608 hypothetical protein At2g22070
[imported] - Arabidopsis thaliana
Length = 786
Score = 360 bits (924), Expect = 8e-98
Identities = 200/633 (31%), Positives = 336/633 (52%), Gaps = 26/633 (4%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F + + + ++ G + + FD++P RDSV+W MI Y ++G Y +++ + G M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+P F+ + L++ A G +H+ +V G R ++ V+NSL++MY KC P A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
+ VFD M + +W +++ + +A+ F M ER + WN+MI+G +RG
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 189 ACLGLFKEMC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
L +F +M +SL PD++T +++++AC + G +H ++ +G+ + V N++
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 248 LSFYAKLECPSDAMEMFNSFGA--FNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS 305
+S Y++ A + G + A++D ++KLGD +A F D+++V+
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
WT+MIVGY ++G+ A+++F M + ++ A+L +SLA L+HGK +H +
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 366 RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAM 424
+ G + V N+L+ MYAK G++ ++ AF I E+D VSW SM+ A HG A EA+
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDM 484
LF M+ G++PD +T+ G+ C+H GL+++G +F M + + H ACMVD+
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 485 LGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEV 544
GR G + EAQ +K T + LL AC H ++ G E L LEPE
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVT--WGSLLSACRVHKNIDLGKVAAERLLLLEPENSG 618
Query: 545 GYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP---- 600
Y L+NLY A G+W+EA +RK M D VKK G SWIE+++ V F + + P
Sbjct: 619 AYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNE 678
Query: 601 ----------------YMADISNILYFLEIEMR 617
Y+ D +++L+ LE E++
Sbjct: 679 IYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVK 711
Score = 207 bits (528), Expect = 6e-52
Identities = 127/434 (29%), Positives = 210/434 (48%), Gaps = 35/434 (8%)
Query: 95 VIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSS 154
++H V+ SG S+ + N+L+++Y K ARK+FDEM +W ++L AY+
Sbjct: 35 LVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRG 94
Query: 155 LFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMN 214
E F +P+R ++W TMI G+ G+ + + +M + +P Q+T + ++
Sbjct: 95 DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLA 154
Query: 215 ACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVS 274
+ +R M G VH F++K G + V NS+L+ YAK P A +F+ + S
Sbjct: 155 SVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 275 WNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS- 333
WNA+I HM++G A F+Q +++IV+W SMI G+ + G AL +F M R+S
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 334 IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC------- 386
+ D +VL ACA+L L GK +HS I+ G D V N+L++MY++C
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 387 --------------------------GDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRA 420
GD+ + F + ++D+V+W +M+ + HG
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 421 NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
EA+ LFR MV G +P+ T ML S L + G S + + G + +
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS-AVKSGEIYSVSVSNA 453
Query: 481 MVDMLGRGGYVAEA 494
++ M + G + A
Sbjct: 454 LITMYAKAGNITSA 467
Score = 130 bits (327), Expect = 1e-28
Identities = 108/414 (26%), Positives = 179/414 (43%), Gaps = 53/414 (12%)
Query: 204 PDQWTFSALMNACT--------ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
P + S L+ CT +S +VH VIKSG ++ + N++++ Y+K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
A ++F+ SWN ++ A+ K GD F Q P ++ VSWT+MIVGY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
G A+ + DM + I+ VL + A+ + GK VHS I++ GL + V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 376 GNSLVNMYAKCGD-------------------------------LEGSALAFCGILEKDL 404
NSL+NMYAKCGD ++ + F + E+D+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVA-SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
V+WNSM+ F G A+ +F +M+ S + PD T +L C++L E +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL----EKLCIGK 299
Query: 464 SMSSEFGLSHGMD----HVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGAC 519
+ S ++ G D + ++ M R G V A+ L ++ T + + LL
Sbjct: 300 QIHSHI-VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG-TKDLKIEGFTALLDGY 357
Query: 520 HAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQG 573
GD+ ++ +L+ V + + Y G + EA + + M+ G
Sbjct: 358 IKLGDMNQAKNI---FVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
>ref|NP_909792.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 804
Score = 352 bits (904), Expect = 2e-95
Identities = 189/592 (31%), Positives = 321/592 (53%), Gaps = 6/592 (1%)
Query: 5 RSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGS 64
R +F S + A+SGR+ AR +F EMP+RD+V+W M+ + G + +++
Sbjct: 95 RRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD 154
Query: 65 MRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLK 124
M P F+ + LS+CA G +H+ VV G S +PVANS+++MYGKC
Sbjct: 155 MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214
Query: 125 PHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARR 184
A VF+ M + +W +++ + +A +F SMP+R ++WN MIAG+ +
Sbjct: 215 SETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQN 274
Query: 185 GEVEACLGLFKEMC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G L LF M ES PD++T +++++AC ++ G VH +++++ + +V
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334
Query: 244 KNSILSFYAKLECPSDAMEMFNSF--GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK 301
N+++S YAK +A + + N +S+ A+++ ++K+GD + A F ++
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVH 361
++V+WT+MIVGY +NG + A+ +F M + ++ AVL CASLA L +GK +H
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454
Query: 362 SCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL-EKDLVSWNSMLFAFGLHGRA 420
IR L++ V N+++ MYA+ G + F + K+ ++W SM+ A HG+
Sbjct: 455 CRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514
Query: 421 NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
EA+ LF EM+ +GV+PD +T+ G+L CSH G ++EG ++ + +E ++ M H AC
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC 574
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEP 540
MVD+L R G +EAQ ++ A ++ LL AC H + E L +++P
Sbjct: 575 MVDLLARAGLFSEAQEFIRRMPVEPDA--IAWGSLLSACRVHKNAELAELAAEKLLSIDP 632
Query: 541 EKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAF 592
Y ++N+Y A G+W +A + K ++ V+K G SW IR+ + F
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVF 684
Score = 209 bits (533), Expect = 2e-52
Identities = 132/422 (31%), Positives = 205/422 (48%), Gaps = 40/422 (9%)
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP----HDARKVF 132
Y+ L C ++ G G IHA V +G +S + N+L+ YG+ DAR++F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 133 DE--MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
DE +A N TW SLL +A S A VF MPER ++W M+ G R G
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
+ +M + P Q+T + ++++C ++ G VH FV+K G S + V NS+L+
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
Y K A +F + SWNA++ + LG A F+ PD++IVSW +MI
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMI 268
Query: 311 VGYTRNGNGELALSMFLDMT-RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL 369
GY +NG AL +F M +S+ D +VL ACA+L + GK VH+ I+R +
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328
Query: 370 DKYLFVGNSLVNMYAKCGDLEG-------------SALAFCGILE--------------- 401
V N+L++ YAK G +E + ++F +LE
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388
Query: 402 -----KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
+D+V+W +M+ + +GR +EA+ LFR M+ G +P+ T +L C+ L +D
Sbjct: 389 GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 448
Query: 457 EG 458
G
Sbjct: 449 YG 450
>ref|NP_173907.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|11067273|gb|AAG28801.1| hypothetical
protein [Arabidopsis thaliana] gi|25345466|pir||E86383
hypothetical protein [imported] - Arabidopsis thaliana
Length = 790
Score = 352 bits (902), Expect = 3e-95
Identities = 203/614 (33%), Positives = 331/614 (53%), Gaps = 11/614 (1%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPD--RDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN 69
T+ + SG I AR +F++ P RD+V +NAMIT +SH +++LF M+
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 70 SKPDSFSYSAALSACAGGSHHGFGSV-IHALVVVSGYRSSLPVANSLIDMYGKCLKP--- 125
KPD+F++++ L+ A + V HA + SG V+N+L+ +Y KC
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 126 -HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVE-IAWNTMIAGHAR 183
H ARKVFDE+ + +E +W +++ Y + F + E+ M + ++ +A+N MI+G+
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
RG + L + + M S + D++T+ +++ AC + + G VH +V++ +
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHF 322
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
NS++S Y K +A +F A + VSWNA++ ++ G +A L F++ +KNI
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
+SW MI G NG GE L +F M R + + + +CA L +G+ H+
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEA 423
+++ G D L GN+L+ MYAKCG +E + F + D VSWN+++ A G HG EA
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 424 MCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVD 483
+ ++ EM+ G++PD +T +L CSH GL+D+G +F SM + + + G DH A ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 484 MLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKE 543
+L R G ++A+S+ + A +E LL C HG++ G + L L PE +
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEI--WEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Query: 544 VGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMA 603
Y++LSN++ A+GQW+E VRK M D+GVKK SWIE+ V F+ + S P
Sbjct: 621 GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAE 680
Query: 604 DISNILYFLEIEMR 617
+ L L EMR
Sbjct: 681 AVYIYLQDLGKEMR 694
Score = 160 bits (406), Expect = 9e-38
Identities = 139/543 (25%), Positives = 242/543 (43%), Gaps = 75/543 (13%)
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSL 155
+H ++ G++ + N LID+Y K + + AR++FDE+++ +++ +++ Y S
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 156 FGMALEVFRSMP--ERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALM 213
+A VF P R + +N MI G + + + + LF +M ++PD +TF++++
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 214 NACTESRDMLYGCM-VHGFVIKSGWSSAMEVKNSILSFYAK-LECPS---DAMEMFNSFG 268
D C+ H +KSG V N+++S Y+K PS A ++F+
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSWTSMIVGYTRNGNGELALSMFL 327
++ SW ++ ++K G + D +V++ +MI GY G + AL M
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
M + I+LD +V+ ACA+ +L GK VH+ ++RR D NSLV++Y KCG
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCG 334
Query: 388 DLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFRE------------------ 429
+ + F + KDLVSWN++L + G EA +F+E
Sbjct: 335 KFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAE 394
Query: 430 -------------MVASGVKPDEVTFTGMLMTCSHLGLIDEG---FAFFRSMSSEFGLSH 473
M G +P + F+G + +C+ LG G A + + LS
Sbjct: 395 NGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSA 454
Query: 474 G-------------------------MDHVA--CMVDMLGRGGYVAEAQSLAKKYSKTSG 506
G +D V+ ++ LG+ G+ AEA + ++ K G
Sbjct: 455 GNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK-KG 513
Query: 507 ARTNSYEVL--LGACHAHGDLGTGSSVGEYLKTLE--PEKEVGYVMLSNLYCASGQWKEA 562
R + +L L AC G + G + ++T+ P Y L +L C SG++ +A
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 563 EIV 565
E V
Sbjct: 574 ESV 576
>emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa (japonica cultivar-group)]
gi|50924444|ref|XP_472582.1| OSJNBa0006B20.5 [Oryza
sativa (japonica cultivar-group)]
Length = 685
Score = 342 bits (876), Expect = 3e-92
Identities = 199/615 (32%), Positives = 318/615 (51%), Gaps = 40/615 (6%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F + + + AR GR A LF +PD D ++NA++ A + G +L +M
Sbjct: 82 FSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHAD 141
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+ +++S+++ALSACA G +HALV S + S + + +L+DMY KC +P +A
Sbjct: 142 DFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEA 201
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
+KVFD +MPER ++WN++I + + G V+
Sbjct: 202 QKVFD-------------------------------AMPERNIVSWNSLITCYEQNGPVD 230
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG-WSSAMEVKNSI 247
L LF M + + PD+ T +++M+AC G VH ++KS + M + N++
Sbjct: 231 EALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNAL 290
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
+ YAK +A +F+ + VS ++I + K + A F Q +KN+V+W
Sbjct: 291 VDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWN 350
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
+I Y N E AL +F+ + R S+ + G VL+ACA+LA L G+ H +++
Sbjct: 351 VLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKE 410
Query: 368 GL------DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRAN 421
G + +FVGNSLV+MY K G + A F + +D VSWN+M+ + +GRA
Sbjct: 411 GFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAK 470
Query: 422 EAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACM 481
+A+ LF M+ S +PD VT G+L C H GL+ EG +F+SM+ + G+ DH CM
Sbjct: 471 DALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCM 530
Query: 482 VDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPE 541
+D+LGR G++ E + L + A + LLGAC H ++ G L L+P+
Sbjct: 531 IDLLGRAGHLKEVEELIENMPMEPDAVL--WASLLGACRLHKNIDMGEWAAGKLFELDPD 588
Query: 542 KEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPY 601
YV+LSN+Y G+W + VR+ M +GV K PG SWIEI V F++ +N P
Sbjct: 589 NSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPC 648
Query: 602 MADISNILYFLEIEM 616
+I + L ++++M
Sbjct: 649 RNEIHDTLRIIQMQM 663
Score = 139 bits (350), Expect = 3e-31
Identities = 106/460 (23%), Positives = 200/460 (43%), Gaps = 84/460 (18%)
Query: 97 HALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLF 156
HA + S + + N+L+ Y + HDAR+VFD M N ++ +LL A A
Sbjct: 38 HARALRSPFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRA 97
Query: 157 GMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNAC 216
AL +F ++P+ + ++N ++A A+ G L M + + ++F++ ++AC
Sbjct: 98 DDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSAC 157
Query: 217 TESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWN 276
+ G VH V KS S + + +++ YAK E P +A ++F++ N VSWN
Sbjct: 158 ASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWN 217
Query: 277 AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL 336
S+I Y +NG + AL++F+ M ++
Sbjct: 218 -------------------------------SLITCYEQNGPVDEALALFVRMMKDGFVP 246
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY---LFVGNSLVNMYAKCG------ 387
D + +V+ ACA LA G+ VH+ +++ D++ + + N+LV+MYAKCG
Sbjct: 247 DEVTLASVMSACAGLAAGREGRQVHTRMVKS--DRFREDMVLNNALVDMYAKCGRTWEAK 304
Query: 388 -------------------------DLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANE 422
++ + F ++EK++V+WN ++ + + E
Sbjct: 305 CVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEE 364
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTC-----------SHLGLIDEGFAFFRSMSSEFGL 471
A+ LF + V P T+ +L C +H+ ++ EGF F S+ +
Sbjct: 365 ALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFV 424
Query: 472 SHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS 511
+ +VDM + G +++ + ++ + N+
Sbjct: 425 GNS------LVDMYLKTGSISDGAKVFERMAARDNVSWNA 458
Score = 62.4 bits (150), Expect = 4e-08
Identities = 44/149 (29%), Positives = 69/149 (45%), Gaps = 8/149 (5%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S +F S + ++G I K+F+ M RD+V+WNAMI Y+ G + +L LF M
Sbjct: 420 SDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERM 479
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGF----GSVIHALVVVSGYRSSLPVANSLIDMYGK 121
SN +PDS + LSAC H G ++ G + +ID+ G+
Sbjct: 480 LCSNERPDSVTMIGVLSAC---GHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGR 536
Query: 122 CLKPHDARKVFDEM-ADSNEVTWCSLLFA 149
+ ++ + M + + V W SLL A
Sbjct: 537 AGHLKEVEELIENMPMEPDAVLWASLLGA 565
Score = 44.3 bits (103), Expect = 0.012
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
L + H+ +R F+ N+L++ YA+ G L + F G+ ++ S+N++L A
Sbjct: 31 LRAARAAHARALRSPFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSA 90
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
GRA++A+ LF + PD+ ++ ++ + G + F +M ++
Sbjct: 91 CARLGRADDALALFGAI----PDPDQCSYNAVVAALAQHGRGGDALRFLAAMHAD 141
>gb|AAF79892.1| Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off
gi|25345465|pir||A86336 T20H2.1 protein (truncated) -
Arabidopsis thaliana
Length = 757
Score = 331 bits (849), Expect = 4e-89
Identities = 192/596 (32%), Positives = 313/596 (52%), Gaps = 10/596 (1%)
Query: 30 LFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSH 89
+ +PD +++++I A + L+ QS+ +F M PDS CA S
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 90 HGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFA 149
G IH + VSG V S+ MY +C + DARKVFD M+D + VT +LL A
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 150 YANSSLFGMALEVFRSMP----ERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
YA + + M E ++WN +++G R G + + +F+++ + PD
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
Q T S+++ + +S + G ++HG+VIK G V ++++ Y K + +FN
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQ----QAPDKNIVSWTSMIVGYTRNGNGEL 321
F NA I + G KA F+ Q + N+VSWTS+I G +NG
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
AL +F +M ++ +++ ++L AC ++A L HG+ H +R L + VG++L++
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
MYAKCG + S + F + K+LV WNS++ F +HG+A E M +F ++ + +KPD ++
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
FT +L C +GL DEG+ +F+ MS E+G+ ++H +CMV++LGR G + EA L K+
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKE 561
+ + LL +C ++ E L LEPE YV+LSN+Y A G W E
Sbjct: 552 PFEPDSCV--WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTE 609
Query: 562 AEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
+ +R +M G+KK PG SWI+++N V ++G+ S P + I+ + + EMR
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMR 665
Score = 116 bits (291), Expect = 2e-24
Identities = 107/472 (22%), Positives = 202/472 (42%), Gaps = 58/472 (12%)
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L+ +Y+N + F A V +S+P+ +++++I + +G+F M PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
L C E G +H SG V+ S+ Y + DA ++F+
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP----DKNIVSWTSMIVGYTRNGNGEL 321
+ V+ +A++ A+ + G ++ + + NIVSW ++ G+ R+G +
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
A+ MF + D + +VL + +L G+++H +I++GL K V +++++
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 382 MYAKCGDLEG--------------------SALAFCGILEK---------------DLVS 406
MY K G + G + L+ G+++K ++VS
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 407 WNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS 466
W S++ +G+ EA+ LFREM +GVKP+ VT ML C ++ + G RS
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG----RSTH 411
Query: 467 SEFGLSHGMDHV---ACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
H +D+V + ++DM + G + +Q + + NS L+ HG
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS---LMNGFSMHG 468
Query: 524 DLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ-------WKEAEIVRKE 568
S+ E L + + ++ ++L A GQ WK +++ +E
Sbjct: 469 KAKEVMSIFESL--MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Score = 104 bits (259), Expect = 1e-20
Identities = 89/411 (21%), Positives = 169/411 (40%), Gaps = 71/411 (17%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
R GR+ ARK+FD M D+D V +A++ AY+ G ++ + + M S + + S++
Sbjct: 163 RCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 80 ALSACAGGSHH-------------GF----------------------GSVIHALVVVSG 104
LS +H GF G +IH V+ G
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 105 YRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFR 164
V +++IDMYGK + +F++ + + + + L ALE+F
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 165 SMPERV----EIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESR 220
E+ ++W ++IAG A+ G+ L LF+EM + +P+ T +++ AC
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIID 280
+ +G HGF ++ + V ++++ YAK + + +FN N V WN++++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 281 AHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLV 340
G++ +G + +S+F + R ++ D +
Sbjct: 463 -------------------------------GFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 341 AGAVLHACASLAILAHG-KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE 390
++L AC + + G K G+ L + +VN+ + G L+
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Score = 53.9 bits (128), Expect = 2e-05
Identities = 35/132 (26%), Positives = 70/132 (52%), Gaps = 4/132 (3%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ GRI ++ +F+ MP ++ V WN+++ +S G ++ +S+F S+ + KPD S++
Sbjct: 434 AKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT 493
Query: 79 AALSAC--AGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
+ LSAC G + G+ + G + L + ++++ G+ K +A + EM
Sbjct: 494 SLLSACGQVGLTDEGW-KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552
Query: 137 -DSNEVTWCSLL 147
+ + W +LL
Sbjct: 553 FEPDSCVWGALL 564
>ref|NP_173449.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 760
Score = 331 bits (849), Expect = 4e-89
Identities = 192/596 (32%), Positives = 313/596 (52%), Gaps = 10/596 (1%)
Query: 30 LFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSH 89
+ +PD +++++I A + L+ QS+ +F M PDS CA S
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 90 HGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFA 149
G IH + VSG V S+ MY +C + DARKVFD M+D + VT +LL A
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 150 YANSSLFGMALEVFRSMP----ERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
YA + + M E ++WN +++G R G + + +F+++ + PD
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
Q T S+++ + +S + G ++HG+VIK G V ++++ Y K + +FN
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQ----QAPDKNIVSWTSMIVGYTRNGNGEL 321
F NA I + G KA F+ Q + N+VSWTS+I G +NG
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
AL +F +M ++ +++ ++L AC ++A L HG+ H +R L + VG++L++
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
MYAKCG + S + F + K+LV WNS++ F +HG+A E M +F ++ + +KPD ++
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
FT +L C +GL DEG+ +F+ MS E+G+ ++H +CMV++LGR G + EA L K+
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKE 561
+ + LL +C ++ E L LEPE YV+LSN+Y A G W E
Sbjct: 552 PFEPDSCV--WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTE 609
Query: 562 AEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
+ +R +M G+KK PG SWI+++N V ++G+ S P + I+ + + EMR
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMR 665
Score = 116 bits (291), Expect = 2e-24
Identities = 107/472 (22%), Positives = 202/472 (42%), Gaps = 58/472 (12%)
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L+ +Y+N + F A V +S+P+ +++++I + +G+F M PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
L C E G +H SG V+ S+ Y + DA ++F+
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP----DKNIVSWTSMIVGYTRNGNGEL 321
+ V+ +A++ A+ + G ++ + + NIVSW ++ G+ R+G +
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
A+ MF + D + +VL + +L G+++H +I++GL K V +++++
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 382 MYAKCGDLEG--------------------SALAFCGILEK---------------DLVS 406
MY K G + G + L+ G+++K ++VS
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 407 WNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS 466
W S++ +G+ EA+ LFREM +GVKP+ VT ML C ++ + G RS
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG----RSTH 411
Query: 467 SEFGLSHGMDHV---ACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
H +D+V + ++DM + G + +Q + + NS L+ HG
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS---LMNGFSMHG 468
Query: 524 DLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ-------WKEAEIVRKE 568
S+ E L + + ++ ++L A GQ WK +++ +E
Sbjct: 469 KAKEVMSIFESL--MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Score = 104 bits (259), Expect = 1e-20
Identities = 89/411 (21%), Positives = 169/411 (40%), Gaps = 71/411 (17%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
R GR+ ARK+FD M D+D V +A++ AY+ G ++ + + M S + + S++
Sbjct: 163 RCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 80 ALSACAGGSHH-------------GF----------------------GSVIHALVVVSG 104
LS +H GF G +IH V+ G
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 105 YRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFR 164
V +++IDMYGK + +F++ + + + + L ALE+F
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 165 SMPERV----EIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESR 220
E+ ++W ++IAG A+ G+ L LF+EM + +P+ T +++ AC
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIID 280
+ +G HGF ++ + V ++++ YAK + + +FN N V WN++++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 281 AHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLV 340
G++ +G + +S+F + R ++ D +
Sbjct: 463 -------------------------------GFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 341 AGAVLHACASLAILAHG-KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE 390
++L AC + + G K G+ L + +VN+ + G L+
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Score = 53.9 bits (128), Expect = 2e-05
Identities = 35/132 (26%), Positives = 70/132 (52%), Gaps = 4/132 (3%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ GRI ++ +F+ MP ++ V WN+++ +S G ++ +S+F S+ + KPD S++
Sbjct: 434 AKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT 493
Query: 79 AALSAC--AGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
+ LSAC G + G+ + G + L + ++++ G+ K +A + EM
Sbjct: 494 SLLSACGQVGLTDEGW-KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552
Query: 137 -DSNEVTWCSLL 147
+ + W +LL
Sbjct: 553 FEPDSCVWGALL 564
>ref|XP_450548.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa (japonica cultivar-group)]
gi|48716903|dbj|BAD23598.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa (japonica
cultivar-group)]
Length = 755
Score = 323 bits (829), Expect = 8e-87
Identities = 198/643 (30%), Positives = 328/643 (50%), Gaps = 53/643 (8%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+ ++ I + R+GR+ A +LF MP R + +NAM+ YS G + SLF ++
Sbjct: 38 VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI-- 95
Query: 68 SNSKPDSFSYSAALSACAGGS----------------------------HHGFGSVIHAL 99
+PD++SY+ L A A S +HG S+
Sbjct: 96 --PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 100 VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMA 159
++ + ++ N ++ Y + + +AR +F+ + + ++W +L+ Y A
Sbjct: 154 FDLAPEKDAVSW-NGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEA 212
Query: 160 LEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALM-----N 214
E+F MP R ++WN M++G+ARRG++ LF ++ D +T++A++ N
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF----DAAPVRDVFTWTAVVSGYAQN 268
Query: 215 ACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVS 274
E ++ M + W N++++ Y + +A E+FN N S
Sbjct: 269 GMLEEARRVFDAMPERNAVS--W-------NAMVAAYIQRRMMDEAKELFNMMPCRNVAS 319
Query: 275 WNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSI 334
WN ++ + + G ++A F P K+ VSW +M+ Y++ G E L +F++M R
Sbjct: 320 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 335 QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSAL 394
++ VL CA +A L G +H +IR G FVGN+L+ MY KCG++E +
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
AF + E+D+VSWN+M+ + HG EA+ +F M + KPD++T G+L CSH GL
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEV 514
+++G ++F SM +FG++ +H CM+D+LGR G +AEA L K + +
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMK--DMPFEPDSTMWGA 557
Query: 515 LLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGV 574
LLGA H + G S E + LEPE YV+LSN+Y +SG+W++A +R M ++GV
Sbjct: 558 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617
Query: 575 KKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
KKVPG SWIE++N V F +G+ P I L L++ M+
Sbjct: 618 KKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
>gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa (japonica
cultivar-group)] gi|50918049|ref|XP_469421.1| putative
DYW7 protein [Oryza sativa (japonica cultivar-group)]
Length = 888
Score = 321 bits (823), Expect = 4e-86
Identities = 194/600 (32%), Positives = 309/600 (51%), Gaps = 35/600 (5%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLG-------LYQQ--------------- 57
++G I AR+LFD MP+R V++ M+ A G LY+Q
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAG 219
Query: 58 ---------SLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRS- 107
+L +F M P+ + + + AC G I L + S
Sbjct: 220 FVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDK 279
Query: 108 SLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMP 167
+L V NSLI +Y + AR++FDEM + V+W +LL YA A V MP
Sbjct: 280 NLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP 339
Query: 168 ERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCM 227
ER E++W T++A H ++G + + L+ +M +P+ FS+++ AC +D+ G
Sbjct: 340 ERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRK 399
Query: 228 VHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGD 287
+H +K S+ + V ++++ Y K + DA +F S N V WN++I +
Sbjct: 400 IHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSK 459
Query: 288 TQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHA 347
+A F++ P +N+ SW S+I GY +N AL F M + + +VL A
Sbjct: 460 MVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLA 519
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSW 407
CASL L GKMVH+ II+ G+ + +FVG +L +MYAK GDL+ S F + +++ V+W
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAW 579
Query: 408 NSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS 467
+M+ +G A E++ LF +M+++G+ P+E TF +L CSH GL++ +F M +
Sbjct: 580 TAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQA 639
Query: 468 EFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGT 527
G+S H CMVD+L R G++AEA+ L K S A NS+ LL AC+ + +
Sbjct: 640 -CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEA--NSWAALLSACNIYRNKEM 696
Query: 528 GSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRN 587
G + L+ L+ + GYV+LSN+Y + G+WK+A +R M +KK G SW++IR+
Sbjct: 697 GERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRD 756
Score = 162 bits (411), Expect = 2e-38
Identities = 112/404 (27%), Positives = 189/404 (46%), Gaps = 40/404 (9%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A G + AR++ DEMP+R+ V+W ++ + G ++++SL+ M +P+ +S
Sbjct: 323 AELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFS 382
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+ L ACA G IH + +++ V+++LIDMY KC + DA+ +F +
Sbjct: 383 SVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK 442
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
N V W SL+ Y+N+S A E+F+ MP R +WN++I+G+A+ + L F M
Sbjct: 443 NIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAML 502
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
S P + TFS+++ AC + G MVH +IK G ++ V ++ YAK
Sbjct: 503 ASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAK----- 557
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
GD + F + P +N V+WT+MI G NG
Sbjct: 558 --------------------------SGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGF 591
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG----KMVHSCIIRRGLDKYLF 374
E ++ +F DM I + A+L AC+ ++ H +M+ +C I Y
Sbjct: 592 AEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHY-- 649
Query: 375 VGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLFAFGLH 417
+V++ A+ G L E L + + SW ++L A ++
Sbjct: 650 --TCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIY 691
Score = 152 bits (385), Expect = 2e-35
Identities = 112/479 (23%), Positives = 209/479 (43%), Gaps = 68/479 (14%)
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD---------- 127
+AA A S+ IHA +VSG + VA+ L+ Y + D
Sbjct: 82 AAASGTAAASSNLPLVLSIHAHALVSGLTADGSVASHLLTAYAAFARAADRDGAFRDCVS 141
Query: 128 -------------------------ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEV 162
AR++FD M + + V++ +++ A A+E+
Sbjct: 142 VVGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVEL 201
Query: 163 FRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDM 222
+R P + MIAG + LG+F EM P++ T +++ AC + +
Sbjct: 202 YRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEF 261
Query: 223 LYGCMVHGFVIKSG-WSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA 281
+ G +KS + V+NS+++ Y + A MF+ + VSW A++D
Sbjct: 262 DLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDV 321
Query: 282 HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
+ +LGD + A + P++N VSW +++ + + GN + A+S++ M + + +
Sbjct: 322 YAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCF 381
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE 401
+VL ACASL L G+ +H+ ++ +FV ++L++MY KC L + + F + +
Sbjct: 382 SSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQ 441
Query: 402 KDLVSWNSMLFAFGLHGRANEAMCLFRE-------------------------------M 430
K++V WNS++ + + + EA LF++ M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGG 489
+ASG P E+TF+ +L+ C+ L ++ G + + G+ + + DM + G
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMG-KMVHAKIIKLGIKESIFVGTALSDMYAKSG 559
Score = 91.3 bits (225), Expect = 9e-17
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 31/207 (14%)
Query: 13 SKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP 72
S I + + ++ A +LF +MP R+ +WN++I+ Y+ + +L F +M S P
Sbjct: 449 SLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSP 508
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
++S+ L ACA G ++HA ++ G + S+ V +L DMY K +++VF
Sbjct: 509 GEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVF 568
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
EM N+V AW MI G A G E +
Sbjct: 569 YEMPKRNDV-------------------------------AWTAMIQGLAENGFAEESIL 597
Query: 193 LFKEMCESLYQPDQWTFSALMNACTES 219
LF++M + P++ TF A++ AC+ S
Sbjct: 598 LFEDMISAGITPNEQTFLAILFACSHS 624
Score = 71.2 bits (173), Expect = 9e-11
Identities = 74/341 (21%), Positives = 140/341 (40%), Gaps = 76/341 (22%)
Query: 228 VHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS----FGAFNQVSWNAIIDAHM 283
+H + SG ++ V + +L+ YA +D F GA + +++ ++ H+
Sbjct: 100 IHAHALVSGLTADGSVASHLLTAYAAFARAADRDGAFRDCVSVVGAASPFAYDFMVREHV 159
Query: 284 KLGDTQKAFLAFQQAPDKNIVSW-------------------------------TSMIVG 312
K GD A F P++++VS+ T+MI G
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAG 219
Query: 313 YTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACA-----SLAILAHGKMVHSCIIRR 367
+ N + AL +F +M + + + +V+ AC LA+ G + S +
Sbjct: 220 FVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNL--- 276
Query: 368 GLDKYLFVGNSLV-------------------------------NMYAKCGDLEGSALAF 396
LDK L V NSL+ ++YA+ GDLEG+
Sbjct: 277 -LDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVL 335
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
+ E++ VSW +++ G A EA+ L+ +M+A G +P+ F+ +L C+ L +
Sbjct: 336 DEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLR 395
Query: 457 EGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
G + + + S+ + + ++DM + + +AQ +
Sbjct: 396 SG-RKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMI 435
Score = 52.4 bits (124), Expect = 4e-05
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
++ +F T+ A+SG + ++++F EMP R+ VAW AMI + G ++S+ LF
Sbjct: 541 IKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFE 600
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHA-----LVVVSGYRSSLPVANSLIDM 118
M + P+ ++ A L AC SH G V HA ++ G ++D+
Sbjct: 601 DMISAGITPNEQTFLAILFAC---SHSGL--VEHAMHYFEMMQACGISPKAKHYTCMVDV 655
Query: 119 YGKCLKPHDARKVFDEMADSNEV-TWCSLLFA---YANSSLFGMALEVFRSMPERVEIAW 174
+ +A + ++ +E +W +LL A Y N + A + + + +
Sbjct: 656 LARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKD----- 710
Query: 175 NTMIAGHARRGEVEACLGLFKEMCE 199
NT AG+ + A G +K+ E
Sbjct: 711 NT--AGYVLLSNMYASCGKWKDAAE 733
>gb|AAF79473.1| F1L3.33 [Arabidopsis thaliana] gi|15220808|ref|NP_173207.1|
pentatricopeptide (PPR) repeat-containing protein
[Arabidopsis thaliana]
Length = 731
Score = 318 bits (815), Expect = 3e-85
Identities = 187/612 (30%), Positives = 305/612 (49%), Gaps = 21/612 (3%)
Query: 4 MRSYLFQTTSKIVSL----ARSGRICHARKLFDEMPD---RDSVAWNAMITAYSHLGLYQ 56
+ ++F++ S +L AR G + AR +F+ + D WN+++ A GLY+
Sbjct: 81 LSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYE 140
Query: 57 QSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLI 116
+L L+ MR D + L AC G H V+ G + +L V N L+
Sbjct: 141 NALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELL 200
Query: 117 DMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERV----EI 172
+Y K + DA +F EM N ++W ++ ++ A+++F M E+
Sbjct: 201 TLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEV 260
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFV 232
W ++++ H++ G+ E L F M S + + C E + VHG+V
Sbjct: 261 TWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYV 320
Query: 233 IKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF 292
IK G+ + +N+++ Y K DA +F SWN++I + + G +A
Sbjct: 321 IKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEAL 380
Query: 293 LAFQQAPDKN--------IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAV 344
F + + N +V+WTS+I G G G+ +L F M + + +++ +
Sbjct: 381 SLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCI 440
Query: 345 LHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL 404
L CA L L G+ +H +IR + + + V N+LVNMYAKCG L +L F I +KDL
Sbjct: 441 LSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDL 500
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRS 464
+SWNS++ +G+HG A +A+ +F M++SG PD + +L CSH GL+++G F S
Sbjct: 501 ISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYS 560
Query: 465 MSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGD 524
MS FGL +H AC+VD+LGR G++ EA + K + + LL +C H +
Sbjct: 561 MSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK--NMPMEPKVCVLGALLNSCRMHKN 618
Query: 525 LGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
+ + L LEPE+ Y++LSN+Y A G+W+E+ VR + +KKV GSSWIE
Sbjct: 619 VDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIE 678
Query: 585 IRNVVTAFVSGN 596
++ F SG+
Sbjct: 679 VKKKKYKFSSGS 690
Score = 49.7 bits (117), Expect = 3e-04
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
SM + + + A+ G + +F+ + D+D ++WN++I Y G +++LS+F
Sbjct: 464 SMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMF 523
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHG 91
M S PD + A LSAC SH G
Sbjct: 524 DRMISSGFHPDGIALVAVLSAC---SHAG 549
>emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|15237421|ref|NP_197188.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|11281372|pir||T51541 hypothetical protein F2K13_10 -
Arabidopsis thaliana
Length = 850
Score = 315 bits (808), Expect = 2e-84
Identities = 193/614 (31%), Positives = 306/614 (49%), Gaps = 36/614 (5%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S +F + + +R + ARK+FDEM D V+WN++I +Y+ LG + +L +F M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 66 RIS-NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLK 124
+PD+ + L CA H G +H V S ++ V N L+DMY KC
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGM 279
Query: 125 PHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERV----EIAWNTMIAG 180
+A VF M+ + V+W +++ Y+ F A+ +F M E + W+ I+G
Sbjct: 280 MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA 240
+A+RG LG+ ++M S +P++ T ++++ C +++G +H + IK
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY----- 394
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLG--DTQKAFLAFQQA 298
P D + N G N V N +ID + K DT +A
Sbjct: 395 ----------------PIDLRK--NGHGDENMVI-NQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 299 PDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL--DNLVAGAVLHACASLAILAH 356
++++V+WT MI GY+++G+ AL + +M Q + L ACASLA L
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 357 GKMVHSCIIRRGLDKY-LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFG 415
GK +H+ +R + LFV N L++MYAKCG + + L F ++ K+ V+W S++ +G
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYG 555
Query: 416 LHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGM 475
+HG EA+ +F EM G K D VT +L CSH G+ID+G +F M + FG+S G
Sbjct: 556 MHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGP 615
Query: 476 DHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL 535
+H AC+VD+LGR G + A L ++ + L C HG + G E +
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV--WVAFLSCCRIHGKVELGEYAAEKI 673
Query: 536 KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSG 595
L + Y +LSNLY +G+WK+ +R M +GVKK PG SW+E T F G
Sbjct: 674 TELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVG 733
Query: 596 NNSSPYMADISNIL 609
+ + P+ +I +L
Sbjct: 734 DKTHPHAKEIYQVL 747
Score = 189 bits (481), Expect = 2e-46
Identities = 140/507 (27%), Positives = 236/507 (45%), Gaps = 58/507 (11%)
Query: 12 TSKIVSLARS-GRICHARKLFDEMPDRDSVA--WNAMITAYSHLGLYQQSLSLFGSMRIS 68
TS ++S S G + HA L P D+ WN++I +Y G + L LFG M
Sbjct: 62 TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSL 121
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+ PD++++ AC S G HAL +V+G+ S++ V N+L+ MY +C DA
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
RKVFDEM+ + V+W S++ +YA +ALE+F M
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN-------------------- 221
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
E +PD T ++ C G +H F + S M V N ++
Sbjct: 222 ----------EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIV 304
YAK +A +F++ + VSWNA++ + ++G + A F++ ++ ++V
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
+W++ I GY + G G AL + M + I+ + + +VL CAS+ L HGK +H
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 365 IRRGLD-------KYLFVGNSLVNMYAKCGDLEGSALAFCGI--LEKDLVSWNSMLFAFG 415
I+ +D V N L++MYAKC ++ + F + E+D+V+W M+ +
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 416 LHGRANEAMCLFREMVASG--VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSH 473
HG AN+A+ L EM +P+ T + L+ C+ L + G + L +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG-----KQIHAYALRN 506
Query: 474 GMDHVA-----CMVDMLGRGGYVAEAQ 495
+ V C++DM + G +++A+
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDAR 533
>dbj|BAD67154.1| PPR868-14 [Physcomitrella patens]
Length = 868
Score = 313 bits (803), Expect = 8e-84
Identities = 179/606 (29%), Positives = 303/606 (49%), Gaps = 28/606 (4%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ I ++ G I A ++F +M +R+ V+W A+I A + ++ L+ M +
Sbjct: 196 TALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGIS 255
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
P++ ++ + L++C G IH+ + G + + VAN+LI MY KC +AR++
Sbjct: 256 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREI 315
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FD M+ + ++W +++ YA S G+ + ++
Sbjct: 316 FDRMSKRDVISWSAMIAGYAQS--------------------------GYKDKESIDEVF 349
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
L + M P++ TF +++ ACT + G +H + K G+ ++ +I + Y
Sbjct: 350 QLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMY 409
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
AK +A ++F+ N V+W + + ++K GD A F + P +N+VSW MI
Sbjct: 410 AKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIA 469
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
GY +NG+ + M Q D + +L AC +LA L GK+VH+ ++ GL+
Sbjct: 470 GYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLES 529
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
V SL+ MY+KCG + + F + +D V+WN+ML +G HG EA+ LF+ M+
Sbjct: 530 DTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRML 589
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
V P+E+T T ++ CS GL+ EG FR M +F ++ H CMVD+LGR G +
Sbjct: 590 KERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRL 649
Query: 492 AEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSN 551
EA+ + S + + LLGAC +H ++ ++ LEP Y+ LSN
Sbjct: 650 QEAEEFIQ--SMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSN 707
Query: 552 LYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYF 611
+Y +G+W ++ VR+ M D+G+KK G S IEI + FV+ + + P + I L
Sbjct: 708 IYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELET 767
Query: 612 LEIEMR 617
L EM+
Sbjct: 768 LTKEMK 773
Score = 169 bits (429), Expect = 2e-40
Identities = 125/510 (24%), Positives = 227/510 (44%), Gaps = 48/510 (9%)
Query: 24 ICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSA 83
+ A ++F M RD V W++MI AY+ ++ F M +N +P+ ++ + L A
Sbjct: 107 VASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKA 166
Query: 84 CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTW 143
C S G IH +V G + + VA +LI MY KC + A +VF +M + N V+W
Sbjct: 167 CNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSW 226
Query: 144 CSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ 203
+++ A A A E L+++M ++
Sbjct: 227 TAIIQANAQHRKLNEAFE-------------------------------LYEQMLQAGIS 255
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
P+ TF +L+N+C + G +H + + G + M V N++++ Y K +A E+
Sbjct: 256 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREI 315
Query: 264 FNSFGAFNQVSWNAIIDAHMKLG--DTQKAFLAFQ-------QAPDKNIVSWTSMIVGYT 314
F+ + +SW+A+I + + G D + FQ + N V++ S++ T
Sbjct: 316 FDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACT 375
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
+G E + ++++ +LD + A+ + A + + V S + +K +
Sbjct: 376 AHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFS----KMANKNVV 431
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
S ++MY KCGDL + F + +++VSWN M+ + +G + L M A G
Sbjct: 432 AWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEG 491
Query: 435 VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
+PD VT +L C L ++ G + + + GL ++ M + G VAEA
Sbjct: 492 FQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEA 550
Query: 495 QSLAKKYSKTSGARTNSYEVLLGACHAHGD 524
+++ + K S T ++ +L HGD
Sbjct: 551 RTV---FDKMSNRDTVAWNAMLAGYGQHGD 577
Score = 138 bits (348), Expect = 5e-31
Identities = 109/490 (22%), Positives = 206/490 (41%), Gaps = 71/490 (14%)
Query: 53 GLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVA 112
G ++++ L G ++ +S +Y + CA G ++H + G + +
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 113 NSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEI 172
NSLI+ Y K F+++A + +V FR M R +
Sbjct: 95 NSLINFYSK----------FEDVASAEQV---------------------FRRMTLRDVV 123
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFV 232
W++MIA +A F+ M ++ +P++ TF +++ AC + G +H V
Sbjct: 124 TWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIV 183
Query: 233 IKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF 292
G + + V ++++ Y+K S A E+F+ N VSW AII A+ + +AF
Sbjct: 184 KAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAF 243
Query: 293 LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA 352
++Q M + I + + ++L++C +
Sbjct: 244 ELYEQ-------------------------------MLQAGISPNAVTFVSLLNSCNTPE 272
Query: 353 ILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLF 412
L G+ +HS I RGL+ + V N+L+ MY KC ++ + F + ++D++SW++M+
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332
Query: 413 AFGLHG-----RANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS 467
+ G +E L M GV P++VTF +L C+ G +++G + S
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL-S 391
Query: 468 EFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGT 527
+ G + +M + G + EA+ + K + + S+ + C GDL +
Sbjct: 392 KVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKC---GDLSS 448
Query: 528 GSSVGEYLKT 537
V + T
Sbjct: 449 AEKVFSEMPT 458
Score = 123 bits (308), Expect = 2e-26
Identities = 105/439 (23%), Positives = 188/439 (41%), Gaps = 75/439 (17%)
Query: 174 WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVI 233
W AG R E LG+ K+ + + T+ ++ C ++R G MVH +
Sbjct: 29 WRLCKAGRLR--EAIQLLGIIKQRGLLV---NSNTYGCVIEHCAKARRFEDGKMVHKQLD 83
Query: 234 KSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFL 293
+ G + + NS+++FY+K E D A
Sbjct: 84 ELGVEIDIYLGNSLINFYSKFE-------------------------------DVASAEQ 112
Query: 294 AFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
F++ +++V+W+SMI Y N + A F MT +I+ + + ++L AC + +I
Sbjct: 113 VFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSI 172
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
L G+ +H+ + G++ + V +L+ MY+KCG++ + F + E+++VSW +++ A
Sbjct: 173 LEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQA 232
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSH 473
H + NEA L+ +M+ +G+ P+ VTF +L +C+ ++ G S SE GL
Sbjct: 233 NAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG-RRIHSHISERGLET 291
Query: 474 GMDHVACMVDMLGRGGYVAEAQSLAKKYSK---------TSGARTNSYE----------- 513
M ++ M + V EA+ + + SK +G + Y+
Sbjct: 292 DMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQL 351
Query: 514 -----------------VLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG-YVMLSNLYCA 555
+L AC AHG L G + L + E + + N+Y
Sbjct: 352 LERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAK 411
Query: 556 SGQWKEAEIVRKEMLDQGV 574
G EAE V +M ++ V
Sbjct: 412 CGSIYEAEQVFSKMANKNV 430
>gb|AAD29807.1| unknown protein [Arabidopsis thaliana] gi|15226463|ref|NP_179705.1|
pentatricopeptide (PPR) repeat-containing protein
[Arabidopsis thaliana] gi|25346340|pir||A84597
hypothetical protein At2g21090 [imported] - Arabidopsis
thaliana
Length = 597
Score = 310 bits (793), Expect = 1e-82
Identities = 178/523 (34%), Positives = 276/523 (52%), Gaps = 4/523 (0%)
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
++ L C G IH + ++G+ R + ++N LI MY KC KP DA KVFD+M
Sbjct: 50 ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
N +W +++ Y S + A VF SMPER ++WNTM+ G+A+ G + L +KE
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
S + ++++F+ L+ AC +SR + HG V+ +G+ S + + SI+ YAK
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
A F+ + W +I + KLGD + A F + P+KN VSWT++I GY R
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
G+G AL +F M ++ + + L A AS+A L HGK +H +IR + V
Sbjct: 290 GSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEK-DLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
+SL++MY+K G LE S F +K D V WN+M+ A HG ++A+ + +M+ V
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
+P+ T +L CSH GL++EG +F SM+ + G+ +H AC++D+LGR G E
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL- 468
Query: 496 SLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCA 555
+ K + + +LG C HG+ G + L L+PE Y++LS++Y
Sbjct: 469 -MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 556 SGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNS 598
G+W+ E +R M + V K SWIEI V AF + S
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGS 570
Score = 164 bits (416), Expect = 6e-39
Identities = 114/425 (26%), Positives = 196/425 (45%), Gaps = 56/425 (13%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
L+ + + +SG + AR +FD MP+RD V+WN M+ Y+ G ++L + R
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
S K + FS++ L+AC H V+V+G+ S++ ++ S+ID Y KC +
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
A++ FDEM + W +L+ YA A ++F MPE+ ++W +IAG+ R+G
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
L LF++M +P+Q+TFS+ + A + +G +HG++I++
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP-------- 344
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSW 306
N + +++ID + K G + + F+ DK + V W
Sbjct: 345 -----------------------NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFW 381
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
+MI ++G G AL M DM + +Q + +L+AC+ HS ++
Sbjct: 382 NTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS-----------HSGLVE 430
Query: 367 RGLDKY--LFVGNSLV---NMYAKCGDLEGSALAFCGILEK--------DLVSWNSMLFA 413
GL + + V + +V YA DL G A F ++ K D WN++L
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490
Query: 414 FGLHG 418
+HG
Sbjct: 491 CRIHG 495
Score = 35.8 bits (81), Expect = 4.3
Identities = 49/198 (24%), Positives = 86/198 (42%), Gaps = 17/198 (8%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDR-DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
+S I ++SG + + ++F D+ D V WN MI+A + GL ++L + M
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 71 KPDSFSYSAALSACAGGSHHGFGSV----IHALVVVSGYRSSLPVANSLIDMYGK--CLK 124
+P+ + L+AC SH G ++ V G LID+ G+ C K
Sbjct: 410 QPNRTTLVVILNAC---SHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 125 PHDARKVFDEMADSNEVTWCSLLFA---YANSSLFGMAL-EVFRSMPERVE--IAWNTMI 178
RK+ + + ++ W ++L + N L A E+ + PE I +++
Sbjct: 467 -ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIY 525
Query: 179 AGHARRGEVEACLGLFKE 196
A H + VE G+ K+
Sbjct: 526 ADHGKWELVEKLRGVMKK 543
>emb|CAE03042.2| OSJNBa0084A10.17 [Oryza sativa (japonica cultivar-group)]
gi|50924392|ref|XP_472556.1| OSJNBa0084A10.17 [Oryza
sativa (japonica cultivar-group)]
Length = 655
Score = 309 bits (791), Expect = 2e-82
Identities = 194/607 (31%), Positives = 310/607 (50%), Gaps = 40/607 (6%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F + L R+ + ARK+FD MP R+SV+W A++T Y+ G ++ LF
Sbjct: 65 VFTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELF----- 119
Query: 68 SNSKPDS--FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
N PD S++A +S G + +G L + +R + ++I Y K
Sbjct: 120 -NRIPDRNVVSWNAMVS---GYARNGMVKRARELFDMMPWRDDVSWL-TMISGYIKRKHV 174
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
+AR++FD M +LL Y A +F M R ++WN MI G+AR G
Sbjct: 175 REARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAG 234
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALM-----NACTESRDMLYGCMVHGFVIKSGWSSA 240
+ LF EM E D + +A+M N ++ ++ M H + W++
Sbjct: 235 SMGIAQRLFDEMPEK----DVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTV--AWNTM 288
Query: 241 ME--VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQA 298
M+ V+N L DA+++F+ +Q+SWNAI+ +++ GD A F++A
Sbjct: 289 MDGFVRNDRLD---------DALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFRRA 339
Query: 299 PDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK 358
P+K+ +SW ++I GY G ALS+ +M R ++ D V+ CASL L GK
Sbjct: 340 PNKDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGK 395
Query: 359 MVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG 418
MVH I+ G + V +SL++MY+KCG + ++ F IL++D V+WN+M+ + HG
Sbjct: 396 MVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHG 455
Query: 419 RANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHV 478
A+EA+ +F M +G +PD TF +L C+H G + EG FRSM ++ L DH
Sbjct: 456 LADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHY 515
Query: 479 ACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTL 538
+CMVD+LGR G++ +A ++ S RT ++E L C++HG++ G + +
Sbjct: 516 SCMVDLLGRSGFIHQAYDFTRRI--PSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLKA 573
Query: 539 EPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNS 598
P Y +LSN+Y A W A VR M ++G+KK G SWIE++ V F S +++
Sbjct: 574 RPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSN 633
Query: 599 SPYMADI 605
P + I
Sbjct: 634 HPLIEQI 640
Score = 127 bits (320), Expect = 8e-28
Identities = 99/416 (23%), Positives = 191/416 (45%), Gaps = 50/416 (12%)
Query: 112 ANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVE 171
+N+ I+ + + + AR+VFDEM++ N TW ++ + + A +VF +MP R
Sbjct: 37 SNTAINEHFRAGRVAAARRVFDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMPVRNS 96
Query: 172 IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ-----------WTFSALMNACTESR 220
++W ++ G+AR G V LF + PD+ + + ++ E
Sbjct: 97 VSWAALLTGYARCGRVAEARELFNRI------PDRNVVSWNAMVSGYARNGMVKRARELF 150
Query: 221 DML-------YGCMVHGFVIKSGWSSAME-----------VKNSILSFYAKLECPSDAME 262
DM+ + M+ G++ + A E V N++LS Y +L A
Sbjct: 151 DMMPWRDDVSWLTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEV 210
Query: 263 MFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELA 322
+F N VSWN +I + + G A F + P+K+++S T+++ GY +NG+ + A
Sbjct: 211 LFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAA 270
Query: 323 LSMFLDMT-RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
+F DM R+++ + ++ G V + A+ +M D+ N+++
Sbjct: 271 WKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMP---------DRDQISWNAILQ 321
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
Y + GD++ + F KD +SWN+++ + G A+ L EM+ G+KPD+ T
Sbjct: 322 GYVQQGDMDSANAWFRRAPNKDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQAT 377
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
+ ++ C+ L + G + + G H ++ ++ M + G ++EA +
Sbjct: 378 LSVVISICASLVSLGCG-KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQV 432
>emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|15235498|ref|NP_192184.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|4263522|gb|AAD15348.1| hypothetical protein
[Arabidopsis thaliana] gi|25345450|pir||A85035
hypothetical protein AT4g02750 [imported] - Arabidopsis
thaliana
Length = 781
Score = 308 bits (788), Expect = 4e-82
Identities = 196/600 (32%), Positives = 305/600 (50%), Gaps = 22/600 (3%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
R+G ARKLFDEMP+RD V+WN MI Y ++ LF M + D S++
Sbjct: 107 RNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNT 162
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVA-NSLIDMYGKCLKPHDARKVFDEMADS 138
LS A G V A V V+ N+L+ Y + K +A +F +
Sbjct: 163 MLSGYAQN-----GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENW 217
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
V+W LL + A + F SM R ++WNT+I G+A+ G+++ LF E
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESP 277
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVK-NSILSFYAKLECP 257
D +T++A+++ ++R + + EV N++L+ Y + E
Sbjct: 278 VQ----DVFTWTAMVSGYIQNR-----MVEEARELFDKMPERNEVSWNAMLAGYVQGERM 328
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
A E+F+ N +WN +I + + G +A F + P ++ VSW +MI GY+++G
Sbjct: 329 EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 388
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
+ AL +F+ M R +L+ + L CA + L GK +H +++ G + FVGN
Sbjct: 389 HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN 448
Query: 378 SLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKP 437
+L+ MY KCG +E + F + KD+VSWN+M+ + HG A+ F M G+KP
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKP 508
Query: 438 DEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
D+ T +L CSH GL+D+G +F +M+ ++G+ H ACMVD+LGR G + +A +L
Sbjct: 509 DDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNL 568
Query: 498 AKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASG 557
K A + LLGA HG+ + + + +EPE YV+LSNLY +SG
Sbjct: 569 MKNMPFEPDAAI--WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSG 626
Query: 558 QWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
+W + +R M D+GVKKVPG SWIEI+N F G+ P +I L L++ M+
Sbjct: 627 RWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 147 bits (372), Expect = 8e-34
Identities = 123/489 (25%), Positives = 225/489 (45%), Gaps = 61/489 (12%)
Query: 36 DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSV 95
D D WN I++Y G ++L +F M + S SY+
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNG---------------- 100
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSL 155
++SGY + N ++ ARK+FDEM + + V+W ++ Y +
Sbjct: 101 -----MISGY-----LRNGEFEL---------ARKLFDEMPERDLVSWNVMIKGYVRNRN 141
Query: 156 FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
G A E+F MPER +WNTM++G+A+ G V+ +F M E + +++AL++A
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSA 197
Query: 216 CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSW 275
++ M CM+ F + W A+ N +L + K + +A + F+S + VSW
Sbjct: 198 YVQNSKMEEACML--FKSRENW--ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSW 253
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDM-TRNSI 334
N II + + G +A F ++P +++ +WT+M+ GY +N E A +F M RN +
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV 313
Query: 335 QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSAL 394
+ ++AG V +A K + + R + + N+++ YA+CG + +
Sbjct: 314 SWNAMLAGYVQGERMEMA-----KELFDVMPCRNVSTW----NTMITGYAQCGKISEAKN 364
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
F + ++D VSW +M+ + G + EA+ LF +M G + + +F+ L TC+ +
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEV 514
++ G + + G G ++ M + G + EA L + + +G S+
Sbjct: 425 LELGKQLHGRL-VKGGYETGCFVGNALLLMYCKCGSIEEANDL---FKEMAGKDIVSWNT 480
Query: 515 LLGACHAHG 523
++ HG
Sbjct: 481 MIAGYSRHG 489
Score = 130 bits (327), Expect = 1e-28
Identities = 112/444 (25%), Positives = 187/444 (41%), Gaps = 85/444 (19%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I A+SG+I AR+LFDE P +D W AM++ Y + +++ LF M N
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----E 312
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
S++A L+ V G R + A+++FD
Sbjct: 313 VSWNAMLAG-----------------YVQGERMEM------------------AKELFDV 337
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
M N TW +++ YA A +F MP+R ++W MIAG+++ G L LF
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
+M + ++ +FS+ ++ C + + G +HG ++K G+ + V N++L Y K
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
+A ++F + VSWN +MI GY+
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWN-------------------------------TMIAGYS 486
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
R+G GE+AL F M R ++ D+ AVL AC+ ++ G+ + + Y
Sbjct: 487 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ----DYGV 542
Query: 375 VGNS-----LVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAMCLFR 428
+ NS +V++ + G LE + + E D W ++L A +HG A
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA----- 597
Query: 429 EMVASGVKPDEVTFTGMLMTCSHL 452
E A + E +GM + S+L
Sbjct: 598 ETAADKIFAMEPENSGMYVLLSNL 621
Score = 100 bits (248), Expect = 2e-19
Identities = 56/152 (36%), Positives = 81/152 (52%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I A+ G+I A+ LFD+MP RD V+W AMI YS G ++L LF M + +
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
S+S+ALS CA G +H +V GY + V N+L+ MY KC +A +F E
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSM 166
MA + V+W +++ Y+ +AL F SM
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESM 501
Score = 75.9 bits (185), Expect = 4e-12
Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 28/257 (10%)
Query: 232 VIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKA 291
++K G S E +I S+ C ++A+ +F ++ VS+N +I +++ G+ + A
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRC-NEALRVFKRMPRWSSVSYNGMISGYLRNGEFELA 114
Query: 292 FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDM-TRNSIQLDNLVAGAVLHACAS 350
F + P++++VSW MI GY RN N A +F M R+ + +++G + C
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 351 ---------------------LAILAHGKMVHSCIIRRGLDKYLFVG-NSLVNMYAKCGD 388
A + + KM +C++ + + + V N L+ + K
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
+ + F + +D+VSWN+++ + G+ +EA LF E D T+T M+
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSG 290
Query: 449 CSHLGLIDEGFAFFRSM 465
+++E F M
Sbjct: 291 YIQNRMVEEARELFDKM 307
Score = 59.7 bits (143), Expect = 3e-07
Identities = 52/190 (27%), Positives = 82/190 (42%), Gaps = 14/190 (7%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F + ++ + G I A LF EM +D V+WN MI YS G + +L F SM+
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Query: 69 NSKPDSFSYSAALSACAGGSHHGF----GSVIHALVVVSGYRSSLPVANSLIDMYGKCLK 124
KPD + A LSAC SH G + + G + ++D+ G+
Sbjct: 505 GLKPDDATMVAVLSAC---SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGL 561
Query: 125 PHDARKVFDEMA-DSNEVTWCSLLFA---YANSSLFGMALE-VFRSMPER--VEIAWNTM 177
DA + M + + W +LL A + N+ L A + +F PE + + + +
Sbjct: 562 LEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNL 621
Query: 178 IAGHARRGEV 187
A R G+V
Sbjct: 622 YASSGRWGDV 631
>gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|15223809|ref|NP_177827.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|25345449|pir||B96799 hypothetical protein F22K20.11
[imported] - Arabidopsis thaliana
Length = 695
Score = 301 bits (771), Expect = 4e-80
Identities = 174/571 (30%), Positives = 299/571 (51%), Gaps = 8/571 (1%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
+ A++G + AR+LF+ MP++D V N+++ Y G +++L LF + S D+
Sbjct: 131 VSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS---ADA 187
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
+ + L ACA G IHA +++ G + +SL+++Y KC A + ++
Sbjct: 188 ITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 247
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
+ + ++ + +L+ YAN + +F R I WN+MI+G+ L LF
Sbjct: 248 IREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLF 307
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
EM + D T +A++NAC + G +H K G + V +++L Y+K
Sbjct: 308 NEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKC 366
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
P +A ++F+ +++ + N++I + G A F++ +K+++SW SM G++
Sbjct: 367 GSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFS 426
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
+NG L F M + + D + +V+ ACAS++ L G+ V + GLD
Sbjct: 427 QNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV 486
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
V +SL+++Y KCG +E F +++ D V WNSM+ + +G+ EA+ LF++M +G
Sbjct: 487 VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 546
Query: 435 VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
++P ++TF +L C++ GL++EG F SM + G +H +CMVD+L R GYV EA
Sbjct: 547 IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 606
Query: 495 QSLAKKYS-KTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLY 553
+L ++ G+ +S +L C A+G G E + LEPE V YV LS ++
Sbjct: 607 INLVEEMPFDVDGSMWSS---ILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIF 663
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
SG W+ + +VRK M + V K PGSSW +
Sbjct: 664 ATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 162 bits (411), Expect = 2e-38
Identities = 152/636 (23%), Positives = 261/636 (40%), Gaps = 106/636 (16%)
Query: 45 MITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSG 104
MI Y+ + S S +M + + Y L +C+ + + L++ G
Sbjct: 1 MILKYNSSYRFYLSSSFLQAMEVDCRR----YYVRLLQSCSSRNRETLWRQTNGLLLKKG 56
Query: 105 YRSSLP-VANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVF 163
+ SS+ VAN L+ MY + K AR +FDEM D N +W +++ Y NS G +L F
Sbjct: 57 FLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF 116
Query: 164 RSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCES----------------------- 200
MPER +WN +++G A+ GE+ LF M E
Sbjct: 117 DMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALR 176
Query: 201 -----LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
+ D T + ++ AC E + G +H ++ G ++ +S+++ YAK
Sbjct: 177 LFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG 236
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
A M + S +A+I + G ++ F + ++ ++ W SMI GY
Sbjct: 237 DLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIA 296
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
N AL +F +M RN + D+ AV++AC L L GK +H + GL + V
Sbjct: 297 NNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVV 355
Query: 376 GNSLVNMYAKCGD-------------------------------LEGSALAFCGILEKDL 404
++L++MY+KCG ++ + F I K L
Sbjct: 356 ASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL 415
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRS 464
+SWNSM F +G E + F +M + DEV+ + ++ C+ + ++ G F +
Sbjct: 416 ISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-A 474
Query: 465 MSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT---------SGARTN----- 510
++ GL + ++D+ + G+V + + K+ SG TN
Sbjct: 475 RATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFE 534
Query: 511 ------------------SYEVLLGACHAHGDLGTGSSVGEYLKT---LEPEKEVGYVML 549
++ V+L AC+ G + G + E +K P+KE + +
Sbjct: 535 AIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKE-HFSCM 593
Query: 550 SNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEI 585
+L +G +EA + +EM V GS W I
Sbjct: 594 VDLLARAGYVEEAINLVEEM----PFDVDGSMWSSI 625
Score = 53.1 bits (126), Expect = 3e-05
Identities = 46/196 (23%), Positives = 89/196 (44%), Gaps = 8/196 (4%)
Query: 12 TSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
+S ++ L + G + H R++FD M D V WN+MI+ Y+ G +++ LF M ++
Sbjct: 488 SSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGI 547
Query: 71 KPDSFSYSAALSAC--AGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+P ++ L+AC G G + ++ V G+ + ++D+ + +A
Sbjct: 548 RPTQITFMVVLTACNYCGLVEEG-RKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 606
Query: 129 RKVFDEMA-DSNEVTWCSLL---FAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARR 184
+ +EM D + W S+L A ++ A E + +A+ + A A
Sbjct: 607 INLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATS 666
Query: 185 GEVEACLGLFKEMCES 200
G+ E+ + K M E+
Sbjct: 667 GDWESSALVRKLMREN 682
>gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|15226200|ref|NP_180329.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|25354625|pir||G84674 probable selenium-binding
protein [imported] - Arabidopsis thaliana
Length = 868
Score = 293 bits (749), Expect = 1e-77
Identities = 178/602 (29%), Positives = 295/602 (48%), Gaps = 73/602 (12%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
+ G + AR LFD+ + V WN+MI+ Y+ GL ++L +F SMR++ + S+++
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
+ CA F +H VV G+ + +L+ Y KC DA ++F E+
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
V ++W MI+G + E + LF EM
Sbjct: 361 NV------------------------------VSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
+P+++T+S ++ A ++ VH V+K+ + + V
Sbjct: 391 KGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGT-------------- 432
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNG 319
A++DA++KLG ++A F DK+IV+W++M+ GY + G
Sbjct: 433 -----------------ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 320 ELALSMFLDMTRNSIQLDNLVAGAVLHACASL-AILAHGKMVHSCIIRRGLDKYLFVGNS 378
E A+ MF ++T+ I+ + ++L+ CA+ A + GK H I+ LD L V ++
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
L+ MYAK G++E + F EKDLVSWNSM+ + HG+A +A+ +F+EM VK D
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
VTF G+ C+H GL++EG +F M + ++ +H +CMVD+ R G + +A +
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 499 KKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
+ +G + + +L AC H G E + ++PE YV+LSN+Y SG
Sbjct: 656 ENMPNPAG--STIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Query: 559 WKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRH 618
W+E VRK M ++ VKK PG SWIE++N +F++G+ S P I ++++E
Sbjct: 714 WQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI-----YMKLEDLS 768
Query: 619 TR 620
TR
Sbjct: 769 TR 770
Score = 159 bits (401), Expect = 3e-37
Identities = 121/444 (27%), Positives = 193/444 (43%), Gaps = 70/444 (15%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+R Y F T S S R+ +A LFD+ P RD ++ +++ +S G Q++ LF
Sbjct: 30 VRIYCFGTVS-------SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFL 82
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
++ + D +S+ L A FG +H + G+ + V SL+D Y K
Sbjct: 83 NIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS 142
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
D RKVFDEM + N VTW +L+ YA +S+
Sbjct: 143 NFKDGRKVFDEMKERNVVTWTTLISGYARNSM---------------------------- 174
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
+ L LF M QP+ +TF+A + E G VH V+K+G + V
Sbjct: 175 ---NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
NS+++ Y K G+ +KA + F + K++
Sbjct: 232 SNSLINLYLK-------------------------------CGNVRKARILFDKTEVKSV 260
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
V+W SMI GY NG AL MF M N ++L +V+ CA+L L + +H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANE 422
+++ G + +L+ Y+KC + + F I ++VSW +M+ F + E
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 423 AMCLFREMVASGVKPDEVTFTGML 446
A+ LF EM GV+P+E T++ +L
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVIL 404
Score = 77.8 bits (190), Expect = 1e-12
Identities = 52/217 (23%), Positives = 106/217 (47%), Gaps = 1/217 (0%)
Query: 295 FQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAIL 354
F ++P ++ S+ S++ G++R+G + A +FL++ R +++D + +VL A+L
Sbjct: 50 FDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDE 109
Query: 355 AHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAF 414
G+ +H I+ G + VG SLV+ Y K + + F + E+++V+W +++ +
Sbjct: 110 LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 415 GLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHG 474
+ +E + LF M G +P+ TF L + G+ G ++ + GL
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ-VHTVVVKNGLDKT 228
Query: 475 MDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS 511
+ ++++ + G V +A+ L K S NS
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS 265
Score = 52.0 bits (123), Expect = 6e-05
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S L +++ + A+ G I A ++F ++D V+WN+MI+ Y+ G ++L +F M
Sbjct: 528 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANS-LIDMYGKCLK 124
+ K D ++ +AC G ++V + NS ++D+Y + +
Sbjct: 588 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 647
Query: 125 PHDARKVFDEMAD-SNEVTWCSLLFA---YANSSLFGMALEVFRSMPERVEIAWNTMIAG 180
A KV + M + + W ++L A + + L +A E +M A+ +
Sbjct: 648 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 707
Query: 181 HARRGE 186
+A G+
Sbjct: 708 YAESGD 713
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,054,624,917
Number of Sequences: 2540612
Number of extensions: 43255789
Number of successful extensions: 110909
Number of sequences better than 10.0: 1091
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 90126
Number of HSP's gapped (non-prelim): 7597
length of query: 630
length of database: 863,360,394
effective HSP length: 134
effective length of query: 496
effective length of database: 522,918,386
effective search space: 259367519456
effective search space used: 259367519456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0238.21