BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0237.4
(471 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_515058.1| PREDICTED: similar to KIAA0845 protein [Pan tro... 61 9e-08
gb|EAL90306.1| La domain family [Aspergillus fumigatus Af293] 60 1e-07
ref|XP_472502.1| OSJNBb0049I21.3 [Oryza sativa (japonica cultiva... 59 3e-07
emb|CAA33366.1| heavy neurofilament subunit [Homo sapiens] 59 3e-07
ref|NP_066554.2| neurofilament, heavy polypeptide 200kDa [Homo s... 59 3e-07
ref|XP_475023.1| OSJNBb0093G06.4 [Oryza sativa (japonica cultiva... 59 3e-07
gb|AAH73969.1| NEFH protein [Homo sapiens] gi|6470331|gb|AAF1372... 59 3e-07
dbj|BAA74868.2| KIAA0845 protein [Homo sapiens] 59 3e-07
gb|AAU43932.1| putative polyprotein [Oryza sativa (japonica cult... 59 4e-07
pir||T02345 hypothetical protein KIAA0324 - human (fragment) gi|... 57 1e-06
gb|AAP52744.1| putative gypsy-type retrotransposon RIRE2 protein... 56 2e-06
gb|EAA66560.1| hypothetical protein AN0461.2 [Aspergillus nidula... 56 2e-06
gb|AAV25235.1| putative polyprotein [Oryza sativa (japonica cult... 56 3e-06
gb|AAN85208.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984... 55 4e-06
gb|AAQ82687.1| Epa5p [Candida glabrata] 55 4e-06
gb|EAL92802.1| nucleolin protein (Nsr1), putative [Aspergillus f... 55 4e-06
gb|AAO63898.1| unknown protein [Arabidopsis thaliana] gi|2839349... 55 4e-06
gb|AAT73677.1| hypothetical protein [Oryza sativa (japonica cult... 55 5e-06
pir||A43427 neurofilament triplet H1 protein - rabbit (fragment)... 55 6e-06
dbj|BAA83718.1| RNA binding protein [Homo sapiens] gi|19923466|r... 55 6e-06
>ref|XP_515058.1| PREDICTED: similar to KIAA0845 protein [Pan troglodytes]
Length = 1269
Score = 60.8 bits (146), Expect = 9e-08
Identities = 107/466 (22%), Positives = 179/466 (37%), Gaps = 46/466 (9%)
Query: 20 VAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKG-AGVSTTSGA 78
V S+ + V++E+ ++ + +K + P A S ++ AK A V + A
Sbjct: 732 VVEKSEKETVIVEEQTEETQVTEEEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKA 791
Query: 79 SKLASD---AQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVEKPP 135
A + + PE E + +A +V P + SPA AKS AE + P
Sbjct: 792 KSPAKEEAKSPPEAKSPEKE-EAKSPVEVKS------PEKAKSPAKEEAKSPAEA-KSPE 843
Query: 136 KAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNS-SPSKESACQETQGATSPIREAEA 194
KA S K+ + S K K KSP KS + SP+KE A + + A SP +E
Sbjct: 844 KAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEA-KSPEKAKSPEKEEAK 902
Query: 195 LPGKDDNPM-----PPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDPLAALDGFLDG 249
P K +P+ P K+ + V+ ++ S V +E + P+ A +
Sbjct: 903 SPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEK 962
Query: 250 TL-----DWDSPPHQADATAETAQSSGVANLQQIEESMGRLKAIVFDIGFLDRIRVDPQA 304
+ +P E A+S A EE+ KA D+ P+A
Sbjct: 963 AKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKTLDV-------KSPEA 1015
Query: 305 SHAAKELLIFLLGQKLDSHQAAALANLQS-------FLVDALATFHQVKDVGQAVSLKEA 357
AKE + + ++ ++S DA A K++ + +K
Sbjct: 1016 KTPAKEEARSPADKSPEKAKSPVKEEVKSPEKAKSPLKEDAKA---PEKEIPKKEEVKSP 1072
Query: 358 KVSSGKAQVAAMKEDFKKFTARKVLIADEISD-VDTKLEELHREIA---KLEKKRADLVE 413
K Q +KE KK K + + D+K EE ++ A K+E+K+ VE
Sbjct: 1073 VKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVE 1132
Query: 414 EGPAVKAQLDGLTKESKALI-ISRKDVIKELEVDQAVKKDLDAKIA 458
+ K + E K + K+ ++EV + K ++A
Sbjct: 1133 KPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVA 1178
Score = 49.3 bits (116), Expect = 3e-04
Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 27/232 (11%)
Query: 13 SPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGV 72
SP+ A P + + ++ V + K + + A S ++ ++
Sbjct: 787 SPEKAKSPAKEEAKSPPEAKSPEKEEAKSPVEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 846
Query: 73 STTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVE 132
S +K ++A+ V +E A +++ S + ++ A +P K +A+ E
Sbjct: 847 SPVKEEAKSPAEAKSPVK-EEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPE 905
Query: 133 K-----------PPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNS---------S 172
K P KA S K + S + K K+ KSP ++KS + S
Sbjct: 906 KAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKS 965
Query: 173 PSKESACQETQGATSPIREAEALPGKDDNPM-----PPPKSTATVQPSPQAK 219
P KE A + + A SP++E P K +P+ P K+ SP+AK
Sbjct: 966 PVKEEA-KTPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKTLDVKSPEAK 1016
Score = 42.4 bits (98), Expect = 0.032
Identities = 45/240 (18%), Positives = 85/240 (34%), Gaps = 18/240 (7%)
Query: 18 SPVAHSSKD-----KPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGV 72
SPV +K PV E + V K + + P + S ++AK V
Sbjct: 951 SPVKAEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKTLDV 1010
Query: 73 STTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVE 132
+ + +A+ + + ++ +V + P +E++ AP K E V+
Sbjct: 1011 KSPEAKTPAKEEARSPADKSPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVK 1070
Query: 133 KPPKAASLAKKTSTSEGRRKVRSKSGHKSP---HRSKSSTNSSPSKESACQETQGATSPI 189
P K ++ E +K + +P + S +P KE+ + + P
Sbjct: 1071 SPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPA 1130
Query: 190 RE----------AEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDP 239
E E K P P ++ A V+ AK + V+ ++ D ++P
Sbjct: 1131 VEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEP 1190
>gb|EAL90306.1| La domain family [Aspergillus fumigatus Af293]
Length = 786
Score = 60.1 bits (144), Expect = 1e-07
Identities = 56/234 (23%), Positives = 92/234 (38%), Gaps = 13/234 (5%)
Query: 11 QPSPQVISPVAH----SSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKR 66
Q P+ +P A S + + D D + + G A+S S
Sbjct: 45 QTEPETTAPTAPTAETSQEAEKAAASTDKDSESTATAPSKTNVSGTSSPSVGASSTSTVS 104
Query: 67 AKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISN---PPSRENSPAPNP 123
+ G +T +G ++ D Q +V+G + G+A D S PP +E AP P
Sbjct: 105 KEEEGSNTPNGTTESNWDKQSQVSGTDKQGNAQEAKDKPNASSDKDKKPPLKELKAAPLP 164
Query: 124 A----KSKAEGVEKPPKAASLAKKTSTSE-GRRKVRSKSGHKSPHRSKSSTNSSPSKESA 178
A + + E E KA + K ++S+ K S + S + ++P K+ A
Sbjct: 165 AVNVWQQRKEAQEAKAKATAALKSAASSKPSASKTASVASSTSGDNHQELPKTAPKKKGA 224
Query: 179 CQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLD 232
+ G R A+ G+D+N PP A+ P+PQ G + EK +
Sbjct: 225 DATSDGPKDRKR-ADGGKGRDENVSIPPVGDASSWPTPQVAQGEEKRKAQEKTE 277
>ref|XP_472502.1| OSJNBb0049I21.3 [Oryza sativa (japonica cultivar-group)]
gi|38346967|emb|CAD39725.2| OSJNBb0049I21.3 [Oryza
sativa (japonica cultivar-group)]
Length = 805
Score = 59.3 bits (142), Expect = 3e-07
Identities = 98/426 (23%), Positives = 173/426 (40%), Gaps = 59/426 (13%)
Query: 4 GQAEVITQPSPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPK--PAAS 61
G++ + + P PQ +P +S K ++ DDD+ D+D+ G K P P +
Sbjct: 299 GESTIRSDPQPQTSNPTGQTSSRKRKLVLDDDEGDDDNR-------SGDKGSPNKLPKRT 351
Query: 62 ASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDAT---IQADVHEHSISNPPSRENS 118
+K+ + +S+ SD P GK+ D T D + S P
Sbjct: 352 MLRKKLANRPMPKIRTSSRKPSDIDP--TGKDPDPAVTEPNSSKDSEPTAESQPTGESQP 409
Query: 119 PAPNPAKSKAEGVEKPPKA-ASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKES 177
+ + KA+ ++PP S A +T+T++ +G++S + P +E
Sbjct: 410 TGAHTSGDKADSSDQPPTGNQSAATETTTTQ-----EPPTGNQS--------DVGPDQEI 456
Query: 178 ACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEE 237
E Q TS EA G D P K Q SP A+ G SS + +E
Sbjct: 457 PEVEAQTTTSQGPEA----GNDSMIGSPNKE----QGSPHAQLGTSSGPPGD------DE 502
Query: 238 DPLAALDGFLDGTLDWDSPPHQADATAETAQSSG-VANLQQIEESMGRL-KAIVFDIGFL 295
+ + + D PP E +Q++G V N Q+ +E + +L KA+ +
Sbjct: 503 EEILRIK-----AADDSRPPILLKWWDENSQAAGIVINRQKEDEEVCQLKKALGEATRIV 557
Query: 296 DRIRVDPQASHAAKELLIFLLGQ----KLDSHQAAALA-NLQSFLVDALATFHQVK-DVG 349
+RI + +A E L+ LG + H+A LA + L + + ++
Sbjct: 558 NRIHLRNEAKTVTLEKLVPHLGTLEAVRDQLHEAKELAKKTEKELRERITQLQDSNFELS 617
Query: 350 QAVSLKEAKVSSGKAQVAAMKEDFKKFTARKVLIADEISDVDTK----LEELHREIAKLE 405
+ + A+++ + Q+ A+K D + A++ E+ D K + L +I KLE
Sbjct: 618 GSSKAQAARMAQMEKQIEALKRDKAELAAQRDSALKEVEDRKIKSQAQFDVLVGKIKKLE 677
Query: 406 KKRADL 411
R ++
Sbjct: 678 GARDEV 683
>emb|CAA33366.1| heavy neurofilament subunit [Homo sapiens]
Length = 1020
Score = 58.9 bits (141), Expect = 3e-07
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 13 SPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGV 72
S + I V S K+ +V E ++ + V+ ++ + ++ + K ++ A+G
Sbjct: 440 SEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEE 499
Query: 73 STTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVE 132
T S ++ A A PE K + V E + S P+ SP AKS AE V+
Sbjct: 500 ETKSPPAEEA--ASPEKEAK---------SPVKEEAKS--PAEAKSPEKEEAKSPAE-VK 545
Query: 133 KPPKAASLAKKTSTSEGRRK------VRSKSGHKSPHRSKSSTNSSPSKESACQETQGAT 186
P KA S AK+ + S K +S + KSP ++KS + + + A
Sbjct: 546 SPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 605
Query: 187 SPIREAEALPGKDDNPM-PPPKSTATVQPSPQAK 219
SP++E P + +P+ KS A V+ +AK
Sbjct: 606 SPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAK 639
Score = 55.1 bits (131), Expect = 5e-06
Identities = 103/432 (23%), Positives = 167/432 (37%), Gaps = 44/432 (10%)
Query: 49 LKGRKRKPKPAASASQKRAKG-AGVSTTSGASKLASD---AQPEVNGKEGDGDATIQADV 104
+K + P A S ++ AK A V + A A + + PE E + +A A+V
Sbjct: 520 VKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKE-EAKSPAEV 578
Query: 105 HEHSISNPPSRENSPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHR 164
P + SPA AKS AE + P KA S K+ + S K K KSP
Sbjct: 579 KS------PEKAKSPAKEEAKSPAEA-KSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAE 631
Query: 165 SKSSTNS-SPSKESACQETQGATSPIREAEALPGKDDNPM-----PPPKSTATVQPSPQA 218
KS + SP+KE A + + A SP +E P K +P+ P K+ + V+ ++
Sbjct: 632 VKSPEKAKSPTKEEA-KSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKS 690
Query: 219 KGGFSSNVSSEKLDTLFEEDPLAALDGFLDGTLDWDSPPHQADATAETAQSSGVANLQQI 278
S V E + P+ + SP + T E A+S +
Sbjct: 691 PEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKA---KSPVKEEAKTPEKAKSPVKEEAKSP 747
Query: 279 EESMGRLKAIVFDIGFLDRIRVDPQASHAAKELLIFLLGQKLDSHQAAALANLQS----- 333
E++ KA D+ P+A AKE + + ++ ++S
Sbjct: 748 EKAKSPEKAKTLDV-------KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAK 800
Query: 334 --FLVDALATFHQVKDVGQAVSLKEAKVSSGKAQVAAMKEDFKKFTARKVLIADEISD-V 390
DA A K++ + +K K Q +KE KK K + +
Sbjct: 801 SPLKADAKA---PEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKK 857
Query: 391 DTKLEELHREIA---KLEKKRADLVEEGPAVKAQLDGLTKESKALI-ISRKDVIKELEVD 446
D+K EE ++ A K+E+K+ VE+ K + E K + K+ ++EV
Sbjct: 858 DSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVK 917
Query: 447 QAVKKDLDAKIA 458
+ K ++A
Sbjct: 918 EDAKPKEKTEVA 929
Score = 49.3 bits (116), Expect = 3e-04
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 20/280 (7%)
Query: 18 SPVAHSSKDKPVVIEDDDDDDEDD-NVSLADKLKG--RKRKPKPAASASQKRAKGA---- 70
SP +K P + ++ + V +K K ++ PA + S ++AK
Sbjct: 552 SPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEE 611
Query: 71 GVSTTSGASKLASDAQPEVNGKEGD-GDATIQADVHEHSISNPPSRENSPAPNPAKSKAE 129
S S + +A+ K + + + + + P +E + +P AKS +
Sbjct: 612 AKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVK 671
Query: 130 GVEKPP-KAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKESACQETQGATSP 188
K P KA S K + S + K K KSP ++K SP KE A + + A SP
Sbjct: 672 AEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAK-----SPVKEEA-KSPEKAKSP 725
Query: 189 IREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDPLAALDGFLD 248
++E P K +P+ + SP+ + +V S + T +E+ + D F +
Sbjct: 726 VKEEAKTPEKAKSPVKEEAKSPEKAKSPEK--AKTLDVKSPEAKTPAKEEARSPADKFPE 783
Query: 249 GTLDWDSPPHQADATAETAQSSGVANLQQIEESMGRLKAI 288
SP + + E A+S A+ + E+ + + + +
Sbjct: 784 KA---KSPVKEEVKSPEKAKSPLKADAKAPEKEIPKKEEV 820
Score = 38.9 bits (89), Expect = 0.35
Identities = 38/161 (23%), Positives = 65/161 (39%), Gaps = 4/161 (2%)
Query: 80 KLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRE-NSPAPNPAKSKAEGVEKPPKAA 138
K S + EV E + ++AD P E SP K + V++PPK A
Sbjct: 784 KAKSPVKEEVKSPE-KAKSPLKADAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKA 842
Query: 139 SLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKESACQETQGATSPIREAEALPGK 198
K +T + K SK ++P + KE A ++ + + ++ EA K
Sbjct: 843 EEEKAPATPKTEEKKDSKK-EEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEA-EDK 900
Query: 199 DDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDP 239
P P ++ A V+ AK + V+ ++ D ++P
Sbjct: 901 KKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEP 941
Score = 37.0 bits (84), Expect = 1.3
Identities = 35/161 (21%), Positives = 65/161 (39%), Gaps = 16/161 (9%)
Query: 86 QPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVEKPPKAASLAKKTS 145
+P +E AT + + + S ++ +P P + K VEKP ++ AKK
Sbjct: 837 EPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKK-E 895
Query: 146 TSEGRRKVRSKSGHKSPHRSKSSTNSSP-------SKESACQETQGATSPIREAEALPGK 198
+E ++KV + ++P + + ++ P KE + + + P + EA P K
Sbjct: 896 EAEDKKKVPTPE-KEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEK 954
Query: 199 DD-------NPMPPPKSTATVQPSPQAKGGFSSNVSSEKLD 232
D P PK+ A + + S +EK +
Sbjct: 955 KDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAE 995
>ref|NP_066554.2| neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 58.9 bits (141), Expect = 3e-07
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 13 SPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGV 72
S + I V S K+ +V E ++ + V+ ++ + ++ + K ++ A+G
Sbjct: 440 SEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEE 499
Query: 73 STTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVE 132
T S ++ A A PE K + V E + S P+ SP AKS AE V+
Sbjct: 500 ETKSPPAEEA--ASPEKEAK---------SPVKEEAKS--PAEAKSPEKEEAKSPAE-VK 545
Query: 133 KPPKAASLAKKTSTSEGRRK------VRSKSGHKSPHRSKSSTNSSPSKESACQETQGAT 186
P KA S AK+ + S K +S + KSP ++KS + + + A
Sbjct: 546 SPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 605
Query: 187 SPIREAEALPGKDDNPM-PPPKSTATVQPSPQAK 219
SP++E P + +P+ KS A V+ +AK
Sbjct: 606 SPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAK 639
Score = 54.3 bits (129), Expect = 8e-06
Identities = 103/432 (23%), Positives = 167/432 (37%), Gaps = 44/432 (10%)
Query: 49 LKGRKRKPKPAASASQKRAKG-AGVSTTSGASKLASD---AQPEVNGKEGDGDATIQADV 104
+K + P A S ++ AK A V + A A + + PE E + +A A+V
Sbjct: 520 VKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKE-EAKSPAEV 578
Query: 105 HEHSISNPPSRENSPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHR 164
P + SPA AKS AE + P KA S K+ + S K K KSP
Sbjct: 579 KS------PEKAKSPAKEEAKSPAEA-KSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAE 631
Query: 165 SKSSTNS-SPSKESACQETQGATSPIREAEALPGKDDNPM-----PPPKSTATVQPSPQA 218
KS + SP+KE A + + A SP +E P K +P+ P K+ + V+ ++
Sbjct: 632 VKSPEKAKSPTKEEA-KSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKS 690
Query: 219 KGGFSSNVSSEKLDTLFEEDPLAALDGFLDGTLDWDSPPHQADATAETAQSSGVANLQQI 278
S V E + P+ + SP + T E A+S +
Sbjct: 691 PEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKA---KSPVKEEAKTPEKAKSPVKEEAKSP 747
Query: 279 EESMGRLKAIVFDIGFLDRIRVDPQASHAAKELLIFLLGQKLDSHQAAALANLQS----- 333
E++ KA D+ P+A AKE + + ++ ++S
Sbjct: 748 EKAKSPEKAKTLDV-------KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAK 800
Query: 334 --FLVDALATFHQVKDVGQAVSLKEAKVSSGKAQVAAMKEDFKKFTARKVLIADEISD-V 390
DA A K++ + +K K Q +KE KK K + +
Sbjct: 801 SPLKEDAKA---PEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKK 857
Query: 391 DTKLEELHREIA---KLEKKRADLVEEGPAVKAQLDGLTKESKALI-ISRKDVIKELEVD 446
D+K EE ++ A K+E+K+ VE+ K + E K + K+ ++EV
Sbjct: 858 DSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVK 917
Query: 447 QAVKKDLDAKIA 458
+ K ++A
Sbjct: 918 EDAKPKEKTEVA 929
Score = 48.5 bits (114), Expect = 4e-04
Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 17/238 (7%)
Query: 18 SPVAHSSKDKPVVIEDDDDDDEDD-NVSLADKLKG--RKRKPKPAASASQKRAKGA---- 70
SP +K P + ++ + V +K K ++ PA + S ++AK
Sbjct: 552 SPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEE 611
Query: 71 GVSTTSGASKLASDAQPEVNGKEGD-GDATIQADVHEHSISNPPSRENSPAPNPAKSKAE 129
S S + +A+ K + + + + + P +E + +P AKS +
Sbjct: 612 AKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVK 671
Query: 130 GVEKPP-KAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKESACQETQGATSP 188
K P KA S K + S + K K KSP ++K SP KE A + + A SP
Sbjct: 672 AEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAK-----SPVKEEA-KSPEKAKSP 725
Query: 189 IREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDPLAALDGF 246
++E P K +P+ + SP+ + +V S + T +E+ + D F
Sbjct: 726 VKEEAKTPEKAKSPVKEEAKSPEKAKSPEK--AKTLDVKSPEAKTPAKEEARSPADKF 781
Score = 39.7 bits (91), Expect = 0.21
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 17/203 (8%)
Query: 52 RKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISN 111
++ P + S ++AK V + + +A+ + + ++ +V +
Sbjct: 741 KEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAK 800
Query: 112 PPSRENSPAPN---PAKSKAEG------------VEKPPKAASLAKKTSTSEGRRKVRSK 156
P +E++ AP P K + + V++PPK A K +T + K SK
Sbjct: 801 SPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSK 860
Query: 157 SGHKSPHRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSP 216
++P + KE A ++ + + ++ EA K P P ++ A V+
Sbjct: 861 K-EEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEA-EDKKKVPTPEKEAPAKVEVKE 918
Query: 217 QAKGGFSSNVSSEKLDTLFEEDP 239
AK + V+ ++ D ++P
Sbjct: 919 DAKPKEKTEVAKKEPDDAKAKEP 941
Score = 37.0 bits (84), Expect = 1.3
Identities = 35/161 (21%), Positives = 65/161 (39%), Gaps = 16/161 (9%)
Query: 86 QPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVEKPPKAASLAKKTS 145
+P +E AT + + + S ++ +P P + K VEKP ++ AKK
Sbjct: 837 EPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKK-E 895
Query: 146 TSEGRRKVRSKSGHKSPHRSKSSTNSSP-------SKESACQETQGATSPIREAEALPGK 198
+E ++KV + ++P + + ++ P KE + + + P + EA P K
Sbjct: 896 EAEDKKKVPTPE-KEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEK 954
Query: 199 DD-------NPMPPPKSTATVQPSPQAKGGFSSNVSSEKLD 232
D P PK+ A + + S +EK +
Sbjct: 955 KDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAE 995
>ref|XP_475023.1| OSJNBb0093G06.4 [Oryza sativa (japonica cultivar-group)]
gi|38347563|emb|CAE04996.2| OSJNBb0093G06.4 [Oryza
sativa (japonica cultivar-group)]
Length = 822
Score = 58.9 bits (141), Expect = 3e-07
Identities = 103/433 (23%), Positives = 173/433 (39%), Gaps = 59/433 (13%)
Query: 4 GQAEVITQPSPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASAS 63
G + P PQ + K ++ DDD+ D+D + KG KP P +
Sbjct: 321 GGPTIRPDPQPQTSKLAGQTGPRKRKLVLDDDEGDDDKSGD-----KGSPNKP-PKRTMP 374
Query: 64 QKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQ--ADVHEHSISNPPSRENSPAP 121
+K+ G + +S+ SD P +GK+ D T Q + E + N P+ E+ P
Sbjct: 375 RKKLAGCAMPKIRTSSRKPSDIDP--SGKDPDPAMTEQNISKDPEPTTENQPTAESQPTG 432
Query: 122 NPAK-SKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKESACQ 180
A +A + PP +++T+E +G++S ++ P +E
Sbjct: 433 THASGDRANPSDLPP----TGNQSATTETATTQEPPTGNQS--------DAGPDQEIPEV 480
Query: 181 ETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDPL 240
ETQ TS EA G D P K Q SP A+ G S + EE P
Sbjct: 481 ETQTTTSQGPEA----GNDSTIGSPGKE----QRSPHAQPGPSGDDG--------EEIPR 524
Query: 241 AALDGFLDGTLDWDSPPHQADATAETAQSSG-VANLQQIEESMGRL-KAIVFDIGFLDRI 298
D PP E +Q++G V N Q+ +E + +L KA+ ++RI
Sbjct: 525 IK-------ATDDSRPPILIKWWDENSQAAGIVINRQKEDEEVCQLKKALGEATRIVNRI 577
Query: 299 RVDPQASHAAKELLIFLLGQ----KLDSHQAAALA-NLQSFLVDALATFHQVK-DVGQAV 352
+ +A E L+ LG + H+A A + L D +A ++ +
Sbjct: 578 HLRNEAKTTTLEKLVPHLGTLEAVRDQLHEAKECAKKTEKELRDRIAQLQDANFELSGSS 637
Query: 353 SLKEAKVSSGKAQVAAMKEDFKKFTARKVLIADEISDVDTK----LEELHREIAKLEKKR 408
+ +++ + Q+ A+K+D + A + E+ D K + L +I +LE R
Sbjct: 638 KAQATRMAQMEKQIEALKKDKAELAAERDSALKEVEDRKIKSQAQFDVLVGKIKRLEGAR 697
Query: 409 ADLVE-EGPAVKA 420
D+ P ++A
Sbjct: 698 DDVANAAAPIIQA 710
>gb|AAH73969.1| NEFH protein [Homo sapiens] gi|6470331|gb|AAF13722.1| neurofilament
protein [Homo sapiens] gi|33302611|sp|P12036|NFH_HUMAN
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
Length = 1026
Score = 58.9 bits (141), Expect = 3e-07
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 13 SPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGV 72
S + I V S K+ +V E ++ + V+ ++ + ++ + K ++ A+G
Sbjct: 440 SEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEE 499
Query: 73 STTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVE 132
T S ++ A A PE K + V E + S P+ SP AKS AE V+
Sbjct: 500 ETKSPPAEEA--ASPEKEAK---------SPVKEEAKS--PAEAKSPEKEEAKSPAE-VK 545
Query: 133 KPPKAASLAKKTSTSEGRRK------VRSKSGHKSPHRSKSSTNSSPSKESACQETQGAT 186
P KA S AK+ + S K +S + KSP ++KS + + + A
Sbjct: 546 SPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 605
Query: 187 SPIREAEALPGKDDNPM-PPPKSTATVQPSPQAK 219
SP++E P + +P+ KS A V+ +AK
Sbjct: 606 SPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAK 639
Score = 52.0 bits (123), Expect = 4e-05
Identities = 63/238 (26%), Positives = 100/238 (41%), Gaps = 31/238 (13%)
Query: 18 SPVAHSSKDKPVVIEDDDDDDEDD-NVSLADKLKG--RKRKPKPAASASQKRAKGAGVST 74
SP +K P + ++ + V +K K ++ PA + S ++AK S
Sbjct: 552 SPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK----SP 607
Query: 75 TSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVEKP 134
+K ++A+ V KE +A A+V + P++E + +P AKS P
Sbjct: 608 VKEEAKSPAEAKSPV--KE---EAKSPAEVKSPEKAKSPTKEEAKSPEKAKS-------P 655
Query: 135 PKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNS---------SPSKESACQETQGA 185
KA S K+ + S + K K+ KSP ++KS + SP KE A + + A
Sbjct: 656 EKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA-KSPEKA 714
Query: 186 TSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSN--VSSEKLDTLFEEDPLA 241
SP++E P K +P+ T SP + S S EK TL + P A
Sbjct: 715 KSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEA 772
Score = 50.4 bits (119), Expect = 1e-04
Identities = 102/471 (21%), Positives = 177/471 (36%), Gaps = 59/471 (12%)
Query: 6 AEVITQPSPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQK 65
AE P + SPV +K P + + ++ K + P+ A S +++
Sbjct: 506 AEEAASPEKEAKSPVKEEAKS-PAEAKSPEKEEA--------KSPAEVKSPEKAKSPAKE 556
Query: 66 RAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAK 125
AK + + + S A EV E + + + + + P + SP AK
Sbjct: 557 EAKSPPEAKSPEKEEAKSPA--EVKSPE-KAKSPAKEEAKSPAEAKSPEKAKSPVKEEAK 613
Query: 126 SKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNS-SPSKESACQETQG 184
S AE + P K + + S + K +K KSP ++KS + SP KE A + +
Sbjct: 614 SPAEA-KSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEA-KSPEK 671
Query: 185 ATSPIREAEALPGKDDNPM-----PPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDP 239
A SP++ P K +P+ P K+ + V+ ++ S V E + P
Sbjct: 672 AKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEE------AKSP 725
Query: 240 LAALDGFLDGTLDWDSPPHQADATAETAQSSGVANLQQIEESMGRLKAIVFDIGFLDRIR 299
A SP + T E A+S + E++ KA D+
Sbjct: 726 EKA-----------KSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDV------- 767
Query: 300 VDPQASHAAKELLIFLLGQKLDSHQAAALANLQS-------FLVDALATFHQVKDVGQAV 352
P+A AKE + + ++ ++S DA A K++ +
Sbjct: 768 KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKA---PEKEIPKKE 824
Query: 353 SLKEAKVSSGKAQVAAMKEDFKKFTARKVLIADEISD-VDTKLEELHREIA---KLEKKR 408
+K K Q +KE KK K + + D+K EE ++ A K+E+K+
Sbjct: 825 EVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKK 884
Query: 409 ADLVEEGPAVKAQLDGLTKESKALI-ISRKDVIKELEVDQAVKKDLDAKIA 458
VE+ K + E K + K+ ++EV + K ++A
Sbjct: 885 EPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVA 935
Score = 39.7 bits (91), Expect = 0.21
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 17/203 (8%)
Query: 52 RKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISN 111
++ P + S ++AK V + + +A+ + + ++ +V +
Sbjct: 747 KEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAK 806
Query: 112 PPSRENSPAPN---PAKSKAEG------------VEKPPKAASLAKKTSTSEGRRKVRSK 156
P +E++ AP P K + + V++PPK A K +T + K SK
Sbjct: 807 SPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSK 866
Query: 157 SGHKSPHRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSP 216
++P + KE A ++ + + ++ EA K P P ++ A V+
Sbjct: 867 K-EEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEA-EDKKKVPTPEKEAPAKVEVKE 924
Query: 217 QAKGGFSSNVSSEKLDTLFEEDP 239
AK + V+ ++ D ++P
Sbjct: 925 DAKPKEKTEVAKKEPDDAKAKEP 947
Score = 37.0 bits (84), Expect = 1.3
Identities = 35/161 (21%), Positives = 65/161 (39%), Gaps = 16/161 (9%)
Query: 86 QPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVEKPPKAASLAKKTS 145
+P +E AT + + + S ++ +P P + K VEKP ++ AKK
Sbjct: 843 EPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKK-E 901
Query: 146 TSEGRRKVRSKSGHKSPHRSKSSTNSSP-------SKESACQETQGATSPIREAEALPGK 198
+E ++KV + ++P + + ++ P KE + + + P + EA P K
Sbjct: 902 EAEDKKKVPTPE-KEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEK 960
Query: 199 DD-------NPMPPPKSTATVQPSPQAKGGFSSNVSSEKLD 232
D P PK+ A + + S +EK +
Sbjct: 961 KDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAE 1001
>dbj|BAA74868.2| KIAA0845 protein [Homo sapiens]
Length = 1034
Score = 58.9 bits (141), Expect = 3e-07
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 13 SPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGV 72
S + I V S K+ +V E ++ + V+ ++ + ++ + K ++ A+G
Sbjct: 448 SEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEE 507
Query: 73 STTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVE 132
T S ++ A A PE K + V E + S P+ SP AKS AE V+
Sbjct: 508 ETKSPPAEEA--ASPEKEAK---------SPVKEEAKS--PAEAKSPEKEEAKSPAE-VK 553
Query: 133 KPPKAASLAKKTSTSEGRRK------VRSKSGHKSPHRSKSSTNSSPSKESACQETQGAT 186
P KA S AK+ + S K +S + KSP ++KS + + + A
Sbjct: 554 SPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 613
Query: 187 SPIREAEALPGKDDNPM-PPPKSTATVQPSPQAK 219
SP++E P + +P+ KS A V+ +AK
Sbjct: 614 SPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAK 647
Score = 52.0 bits (123), Expect = 4e-05
Identities = 63/238 (26%), Positives = 100/238 (41%), Gaps = 31/238 (13%)
Query: 18 SPVAHSSKDKPVVIEDDDDDDEDD-NVSLADKLKG--RKRKPKPAASASQKRAKGAGVST 74
SP +K P + ++ + V +K K ++ PA + S ++AK S
Sbjct: 560 SPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK----SP 615
Query: 75 TSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVEKP 134
+K ++A+ V KE +A A+V + P++E + +P AKS P
Sbjct: 616 VKEEAKSPAEAKSPV--KE---EAKSPAEVKSPEKAKSPTKEEAKSPEKAKS-------P 663
Query: 135 PKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNS---------SPSKESACQETQGA 185
KA S K+ + S + K K+ KSP ++KS + SP KE A + + A
Sbjct: 664 EKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA-KSPEKA 722
Query: 186 TSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSN--VSSEKLDTLFEEDPLA 241
SP++E P K +P+ T SP + S S EK TL + P A
Sbjct: 723 KSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEA 780
Score = 50.4 bits (119), Expect = 1e-04
Identities = 102/471 (21%), Positives = 177/471 (36%), Gaps = 59/471 (12%)
Query: 6 AEVITQPSPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQK 65
AE P + SPV +K P + + ++ K + P+ A S +++
Sbjct: 514 AEEAASPEKEAKSPVKEEAKS-PAEAKSPEKEEA--------KSPAEVKSPEKAKSPAKE 564
Query: 66 RAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAK 125
AK + + + S A EV E + + + + + P + SP AK
Sbjct: 565 EAKSPPEAKSPEKEEAKSPA--EVKSPE-KAKSPAKEEAKSPAEAKSPEKAKSPVKEEAK 621
Query: 126 SKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNS-SPSKESACQETQG 184
S AE + P K + + S + K +K KSP ++KS + SP KE A + +
Sbjct: 622 SPAEA-KSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEA-KSPEK 679
Query: 185 ATSPIREAEALPGKDDNPM-----PPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDP 239
A SP++ P K +P+ P K+ + V+ ++ S V E + P
Sbjct: 680 AKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEE------AKSP 733
Query: 240 LAALDGFLDGTLDWDSPPHQADATAETAQSSGVANLQQIEESMGRLKAIVFDIGFLDRIR 299
A SP + T E A+S + E++ KA D+
Sbjct: 734 EKA-----------KSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDV------- 775
Query: 300 VDPQASHAAKELLIFLLGQKLDSHQAAALANLQS-------FLVDALATFHQVKDVGQAV 352
P+A AKE + + ++ ++S DA A K++ +
Sbjct: 776 KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKA---PEKEIPKKE 832
Query: 353 SLKEAKVSSGKAQVAAMKEDFKKFTARKVLIADEISD-VDTKLEELHREIA---KLEKKR 408
+K K Q +KE KK K + + D+K EE ++ A K+E+K+
Sbjct: 833 EVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKK 892
Query: 409 ADLVEEGPAVKAQLDGLTKESKALI-ISRKDVIKELEVDQAVKKDLDAKIA 458
VE+ K + E K + K+ ++EV + K ++A
Sbjct: 893 EPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVA 943
Score = 39.7 bits (91), Expect = 0.21
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 17/203 (8%)
Query: 52 RKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISN 111
++ P + S ++AK V + + +A+ + + ++ +V +
Sbjct: 755 KEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAK 814
Query: 112 PPSRENSPAPN---PAKSKAEG------------VEKPPKAASLAKKTSTSEGRRKVRSK 156
P +E++ AP P K + + V++PPK A K +T + K SK
Sbjct: 815 SPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSK 874
Query: 157 SGHKSPHRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSP 216
++P + KE A ++ + + ++ EA K P P ++ A V+
Sbjct: 875 K-EEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEA-EDKKKVPTPEKEAPAKVEVKE 932
Query: 217 QAKGGFSSNVSSEKLDTLFEEDP 239
AK + V+ ++ D ++P
Sbjct: 933 DAKPKEKTEVAKKEPDDAKAKEP 955
Score = 37.0 bits (84), Expect = 1.3
Identities = 35/161 (21%), Positives = 65/161 (39%), Gaps = 16/161 (9%)
Query: 86 QPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVEKPPKAASLAKKTS 145
+P +E AT + + + S ++ +P P + K VEKP ++ AKK
Sbjct: 851 EPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKK-E 909
Query: 146 TSEGRRKVRSKSGHKSPHRSKSSTNSSP-------SKESACQETQGATSPIREAEALPGK 198
+E ++KV + ++P + + ++ P KE + + + P + EA P K
Sbjct: 910 EAEDKKKVPTPE-KEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEK 968
Query: 199 DD-------NPMPPPKSTATVQPSPQAKGGFSSNVSSEKLD 232
D P PK+ A + + S +EK +
Sbjct: 969 KDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAE 1009
>gb|AAU43932.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 826
Score = 58.5 bits (140), Expect = 4e-07
Identities = 100/433 (23%), Positives = 171/433 (39%), Gaps = 55/433 (12%)
Query: 4 GQAEVITQPSPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASAS 63
G + P PQ + K ++ DDD+ D+D + KG KP P +
Sbjct: 321 GGPTIRPDPQPQTSKSTGQTGPRKRKLVLDDDEGDDDKSGD-----KGSPNKP-PKRTMP 374
Query: 64 QKRAKGAGVSTTSGASKLASDAQPEVNGKEGD---GDATIQADVHEHSISNPPSRENSPA 120
+K+ G + +S+ SD P +GK+ D + I D + S P ++
Sbjct: 375 RKKLAGRAMLKIRTSSRKPSDIDP--SGKDPDPAMAEQNISKDPEPTAESQPTAKSQPTG 432
Query: 121 PNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKESACQ 180
+ + +A ++PP +++T+E +G++S ++ P +E
Sbjct: 433 AHASGDQANPSDQPP----TGNQSATTEAATTQEPPTGNQS--------DAGPDQEIPEV 480
Query: 181 ETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDPL 240
E Q S EA G D P K Q SP A+ SS S + EE P
Sbjct: 481 EAQTTASQGPEA----GNDSIAGSPGKE----QRSPHAQLSTSSGPSGDD----GEEIPR 528
Query: 241 AALDGFLDGTLDWDSPPHQADATAETAQSSG-VANLQQIEESMGRL-KAIVFDIGFLDRI 298
D PP E +Q++G V N Q+ +E + +L KA+ ++RI
Sbjct: 529 IK-------ATDDSRPPILIKWWDENSQAAGIVINRQKEDEEVCQLKKALGEATRIVNRI 581
Query: 299 RVDPQASHAAKELLIFLLGQKL----DSHQAAALA-NLQSFLVDALATFHQVK-DVGQAV 352
+ +A E L+ LG + H+A A + L D +A ++ +
Sbjct: 582 HLRNEAKTTTLEKLVPHLGTREAVRDQLHEAKECAKKTEKELRDRIAQLQDANFELSGSS 641
Query: 353 SLKEAKVSSGKAQVAAMKEDFKKFTARKVLIADEISDVDTK----LEELHREIAKLEKKR 408
+ A++ K QV A++ D + A++ E+ D K + L +I +LE R
Sbjct: 642 KAQAARMEQMKKQVEALERDNVELAAQRDSALKEVEDRKIKSQAQFDVLVGKIKRLEGAR 701
Query: 409 ADLVE-EGPAVKA 420
D+ P ++A
Sbjct: 702 DDVANAAAPIIQA 714
>pir||T02345 hypothetical protein KIAA0324 - human (fragment)
gi|2996650|gb|AAC08453.1| KIAA0324 [Homo sapiens]
Length = 1791
Score = 57.0 bits (136), Expect = 1e-06
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Query: 57 KPAASASQKRAKGA-GVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSR 115
+P+A A+ + AK S++S +S +S + + G ++ ++ + +
Sbjct: 1549 QPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVAL 1608
Query: 116 ENSPAPNPAKSKA--EGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSP 173
+ P+P PA +A EG P A +++S+S S S S S SS++SS
Sbjct: 1609 KRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 1668
Query: 174 SKESACQETQGATSPIREA-EALPGKDDNPMPPP--KSTATVQPSPQ------AKGGFSS 224
S S+ + + SP + +ALP PPP +S V PSP+ A+G F
Sbjct: 1669 SSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERSLLPVSPSPRHSLPHVARGTFLK 1728
Query: 225 NVS 227
S
Sbjct: 1729 RTS 1731
Score = 54.7 bits (130), Expect = 6e-06
Identities = 52/190 (27%), Positives = 82/190 (42%), Gaps = 20/190 (10%)
Query: 44 SLADKLKGRKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQAD 103
SL + + R P P+A + Q R A + +G+ L+S A GD
Sbjct: 1470 SLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGD-------- 1521
Query: 104 VHEHSISNP-PSRENSPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSP 162
H +S P P +S P S G ++P ++LA E R S S S
Sbjct: 1522 -HNGMLSVPAPGVPHSDVGEPPAS--TGAQQP---SALAALQPAKERRSSSSSSSSSSSS 1575
Query: 163 HRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTA----TVQPSPQA 218
S SS++SS S S+ +++G++ P++ AL + +P P PK +P+P
Sbjct: 1576 SSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK-RVPSPTPAPKEAVREGRPPEPTPAK 1634
Query: 219 KGGFSSNVSS 228
+ SS+ SS
Sbjct: 1635 RKRRSSSSSS 1644
Score = 37.4 bits (85), Expect = 1.0
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 29/238 (12%)
Query: 23 SSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASAS-----QKRAKGAGVSTTSG 77
SS D V E ++S K+K + P P+ S S Q+++K + V + G
Sbjct: 5 SSPDTKVKPETPPRQSHSGSISPYPKVKAQT-PPGPSLSGSKSPCPQEKSKDSLVQSCPG 63
Query: 78 ASKLASDAQPEVN-GKEGDGDATIQ-------ADVHEHSISNPPSRENSPAPNPAKSKAE 129
+ L + + G+ G +++Q + H S+P R++ +SK++
Sbjct: 64 SLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSHSESPSLQSKSQ 123
Query: 130 GVEKPPKAASLAKKTSTSEGRRKVRSKSGH----------KSPHRSKSSTNSSP----SK 175
K ++ S + T + R +R G SP +S+ ++SS
Sbjct: 124 TSPKGGRSRSSSPVTELAS-RSPIRQDRGEFSASPMLKSGMSPEQSRFQSDSSSYPTVDS 182
Query: 176 ESACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDT 233
S +++ T+ +E ALP ++D PP+ P P SS V + L T
Sbjct: 183 NSLLGQSRLETAESKEKMALPPQEDATASPPRQKDKFSPFPVQDRPESSLVFKDTLRT 240
Score = 34.3 bits (77), Expect = 8.6
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 18/150 (12%)
Query: 58 PAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSREN 117
P S S +KG G S +S +S P + G S S+P +
Sbjct: 665 PRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRG-----------SRSSPEPKTK 713
Query: 118 SPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPS--- 174
S P +S E KA L++++ ++ + RS++ P +S + SSP
Sbjct: 714 SRTPPRRRSSRSSPELTRKAR-LSRRSRSASSSPETRSRT---PPRHRRSPSVSSPEPAE 769
Query: 175 KESACQETQGATSPIREAEALPGKDDNPMP 204
K + + + A+SP + + G+ +P P
Sbjct: 770 KSRSSRRRRSASSPRTKTTSRRGRSPSPKP 799
>gb|AAP52744.1| putative gypsy-type retrotransposon RIRE2 protein [Oryza sativa
(japonica cultivar-group)] gi|37532310|ref|NP_920457.1|
putative gypsy-type retrotransposon RIRE2 protein [Oryza
sativa (japonica cultivar-group)]
gi|20270062|gb|AAM18150.1| Putative gypsy-type
retrotransposon RIRE2 protein [Oryza sativa (japonica
cultivar-group)] gi|18958682|gb|AAL82665.1|
retrotransposon protein, putative, Ty3-gypsy sub-class
[Oryza sativa (japonica cultivar-group)]
Length = 826
Score = 56.2 bits (134), Expect = 2e-06
Identities = 101/433 (23%), Positives = 177/433 (40%), Gaps = 55/433 (12%)
Query: 4 GQAEVITQPSPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASAS 63
G + P PQ + K ++ DDD+ D+D + KG KP P +
Sbjct: 321 GGPTIRPDPQPQTSKLAGQTGPRKRKLVLDDDEGDDDKSGD-----KGSPSKP-PKRTMP 374
Query: 64 QKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQ--ADVHEHSISNPPSRENSP-A 120
+K+ G + +S+ SD P +GK+ D T Q + E + N P+ E+ P
Sbjct: 375 RKKLAGRAMPKIRTSSRKPSDIDP--SGKDPDPAMTEQNISKDPEPTTENQPTAESQPTG 432
Query: 121 PNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKESACQ 180
+ + +A + PP +++T+E +G++S ++ P++E
Sbjct: 433 AHASGDRANPSDLPP----TGNQSATTETATTQEPPTGNQS--------DAGPNQEIPEV 480
Query: 181 ETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDPL 240
E Q TS EA G D S+ Q SP A+ G SS +S + EE P
Sbjct: 481 EAQTTTSQGPEA----GNDS----IAGSSGKEQRSPHAQLGTSSGLSGDD----GEEIPR 528
Query: 241 AALDGFLDGTLDWDSPPHQADATAETAQSSG-VANLQQIEESMGRL-KAIVFDIGFLDRI 298
D PP E +Q++G V N Q+ +E + +L KA+ ++RI
Sbjct: 529 IK-------ATDSSRPPILIKWWDENSQAAGIVINRQKEDEEVCQLKKALGEATRIVNRI 581
Query: 299 RVDPQASHAAKELLIFLLGQ----KLDSHQAAALA-NLQSFLVDALATFHQVK-DVGQAV 352
+ +A E L+ LG + H+A A + L D +A ++ +
Sbjct: 582 HLRNEAKTTTLEKLVPHLGTLEAVRDQLHEAKECAKKTEKELRDRIAQLQDANFELSGSS 641
Query: 353 SLKEAKVSSGKAQVAAMKEDFKKFTARKVLIADEISDVDTK----LEELHREIAKLEKKR 408
+ +++ + Q+ A+K+D + A + E+ D K + L +I +LE R
Sbjct: 642 KAQATRMAQMEKQIEALKKDKVELAAERDSALKEVEDRKIKSQAQFDVLVGKIKRLEGAR 701
Query: 409 ADLVE-EGPAVKA 420
++ P ++A
Sbjct: 702 DNVANAAAPLIQA 714
>gb|EAA66560.1| hypothetical protein AN0461.2 [Aspergillus nidulans FGSC A4]
gi|67516359|ref|XP_658065.1| hypothetical protein
AN0461_2 [Aspergillus nidulans FGSC A4]
gi|49084868|ref|XP_404598.1| hypothetical protein
AN0461.2 [Aspergillus nidulans FGSC A4]
Length = 435
Score = 56.2 bits (134), Expect = 2e-06
Identities = 55/243 (22%), Positives = 101/243 (40%), Gaps = 22/243 (9%)
Query: 18 SPVAHSSKDKPVVIEDDDDDDEDDNVSLAD--KLKGRKRKPKPAASASQK------RAKG 69
S + SS + D DD+++D +LA KG KRK + +AS+S +AK
Sbjct: 136 SSSSSSSSSSSSSSDSDADDEDEDEAALAPGPAAKGVKRKAESSASSSGSDSEETPKAKK 195
Query: 70 AGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAE 129
+++ + S +S + + D D+ + S S + +S + + + S
Sbjct: 196 TKLTSKAEESSSSSSESSSDSSSDSDSDSDSSSSSESESESESDASHSSSSSSSSDSSDS 255
Query: 130 GVEKPPKAASLAKKTSTSEGRRKVRSKSGHKS---------PHRSKSSTNSSPSKESACQ 180
+ ++S + S+SE K+ K+ P SS+ SS S S+ +
Sbjct: 256 SSDSSSDSSSDSSSDSSSESESDAAKKADKKALKAATETPLPPSDSSSSGSSDSSSSSGE 315
Query: 181 ETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDPL 240
E+ + ++ +EA P +++ + SP + G N + +K T PL
Sbjct: 316 ESSSTSRTLQNSEA--EATQKPAATSEASVSSSASPAPRNG---NGNGKKNHTGTRPTPL 370
Query: 241 AAL 243
AAL
Sbjct: 371 AAL 373
Score = 55.1 bits (131), Expect = 5e-06
Identities = 58/245 (23%), Positives = 98/245 (39%), Gaps = 26/245 (10%)
Query: 33 DDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGK 92
D D D D +S A K++ R+R ++S+S A + S++S +S SDA E
Sbjct: 102 DSDSSDSDVEMSEAPKVQ-RRRSSSTSSSSSSSSASSSSSSSSSSSSSSDSDADDE---- 156
Query: 93 EGDGDATIQADVHEHSISNPPSRE--NSPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGR 150
D E +++ P+ + A + A S E+ PK AKKT +
Sbjct: 157 ----------DEDEAALAPGPAAKGVKRKAESSASSSGSDSEETPK----AKKTKLTSKA 202
Query: 151 RKVRSKSGHKSPHRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTA 210
+ S S S S S + S S S+ E++ + + + D + S+
Sbjct: 203 EESSSSSSESSSDSSSDSDSDSDSSSSSESESESESDASHSSSSSSSSDSSDSSSDSSSD 262
Query: 211 TVQPSPQAKGGFSSNVSSEKLD----TLFEEDPLAALDGFLDGTLDWDSPP-HQADATAE 265
+ S S + +++K D E PL D G+ D S ++ +T+
Sbjct: 263 SSSDSSSDSSSESESDAAKKADKKALKAATETPLPPSDSSSSGSSDSSSSSGEESSSTSR 322
Query: 266 TAQSS 270
T Q+S
Sbjct: 323 TLQNS 327
>gb|AAV25235.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 826
Score = 55.8 bits (133), Expect = 3e-06
Identities = 95/415 (22%), Positives = 165/415 (38%), Gaps = 54/415 (13%)
Query: 12 PSPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAG 71
P PQ + K ++ DDD+ D+D + KG KP P + +K+ G
Sbjct: 329 PQPQTSKSTGQTGPRKRKLVLDDDEGDDDKSGD-----KGSPNKP-PKRTMPRKKLAGRA 382
Query: 72 VSTTSGASKLASDAQPEVNGKEGD---GDATIQADVHEHSISNPPSRENSPAPNPAKSKA 128
+ +S+ SD P +GK+ D + I D + S P ++ + + +A
Sbjct: 383 MLKIRTSSRKPSDIDP--SGKDPDPAMAEQNISKDPEPTAESQPTAKSQPTGAHASGDQA 440
Query: 129 EGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKESACQETQGATSP 188
++PP +++T+E +G++S ++ P +E E Q S
Sbjct: 441 NPSDQPP----TGNQSATTEAATTQEPPTGNQS--------DAGPDQEIPEVEAQTTASQ 488
Query: 189 IREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDPLAALDGFLD 248
EA G D P K Q SP A+ G SS S + EE P
Sbjct: 489 GPEA----GNDSIAGSPGKE----QRSPHAQLGTSSGPSGDD----GEEIPRIK------ 530
Query: 249 GTLDWDSPPHQADATAETAQSSG-VANLQQIEESMGRL-KAIVFDIGFLDRIRVDPQASH 306
D PP E +Q++G V N Q+ +E + +L KA+ ++RI + +A
Sbjct: 531 -ATDDSRPPILIKWWDENSQAAGIVINRQKEDEEVCQLKKALGEATRIVNRIHLRNEAKT 589
Query: 307 AAKELLIFLLGQ----KLDSHQAAALA-NLQSFLVDALATFHQVK-DVGQAVSLKEAKVS 360
E L+ LG + H+A A + L D +A ++ + + +++
Sbjct: 590 TTLEKLVPHLGTLEAVRDQLHEAKECAKKTEKELRDRIAQLQDANFELSGSSKAQATRMA 649
Query: 361 SGKAQVAAMKEDFKKFTARKVLIADEISDVDTK----LEELHREIAKLEKKRADL 411
+ Q+ A+K+D A + E+ D K + L +I +LE R ++
Sbjct: 650 QMEKQIEALKKDKAGLAAERDSALKEVEDRKIKSQAQFDVLVGKIKRLEGARDEV 704
>gb|AAN85208.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984133|gb|AAN85207.1|
DNA topoisomerase II [Nicotiana tabacum]
Length = 1482
Score = 55.5 bits (132), Expect = 4e-06
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 15 QVISPVAHS------SKDKPVVIEDDDDDDEDDNVSLADKL------------------- 49
+V+ P A +K KP+ +ED++++++D+ ++L D+L
Sbjct: 1221 EVVKPKARGGSKKAPAKAKPIAVEDEEEEEDDEVLALKDRLAAYNLNSSPDHSAEAMETE 1280
Query: 50 --KGRKRKPKPAASASQKRAKG-AGVSTTSGASKLASDAQPE----VNGKEGDGDATIQA 102
K +K+ P A+A +K A VS +++ D + E V GK+ G A
Sbjct: 1281 APKAQKKAPTRKAAAKKKTLPSIADVSEGEDEIEISDDDESEPEVAVGGKKKGGRKPATA 1340
Query: 103 DVHEHSISNPPSRENSPAPNPAKSKAEGVEKPPKAASL--AKKTSTSEGRRKVRSKSGHK 160
+ PP + PA +A G+ + + L A+ T S +KVR
Sbjct: 1341 KAAPAAAKQPPKKR-----GPANKQAVGIGQKLITSILKPAENTDNSSPEKKVRKM--RA 1393
Query: 161 SPHRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTAT 211
SP KS +K S QE + A SP+ +L + + + PK+ T
Sbjct: 1394 SPFNEKSGAVLGKNKGSTLQENEDA-SPVSSLGSLEDEVNEAVVAPKARVT 1443
>gb|AAQ82687.1| Epa5p [Candida glabrata]
Length = 1218
Score = 55.5 bits (132), Expect = 4e-06
Identities = 44/230 (19%), Positives = 89/230 (38%), Gaps = 12/230 (5%)
Query: 9 ITQPSPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAK 68
+ +P P + SS P + S + ++S+S +
Sbjct: 318 VCEPLPTPSQDINSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSP 377
Query: 69 GAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPA----PNPA 124
+ S++S +S +S + P + ++ + S S+ S +S + P+P+
Sbjct: 378 SSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPS 437
Query: 125 KSKAEGVEKPPKAASLAKKTSTSEGRRKV-------RSKSGHKSPHRSKSSTNSSPSKES 177
+S + ++S + +S+S S S S S SS++ SPS S
Sbjct: 438 RSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSPSPSSSS 497
Query: 178 ACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVS 227
+ + ++SP + + P D +P P + ++V PS +S+ S
Sbjct: 498 SSSSSSSSSSPSIQPSSKP-VDPSPADPSNNPSSVNPSSVNPSSINSSPS 546
Score = 51.2 bits (121), Expect = 7e-05
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 56 PKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSR 115
P P++S+S + + S++S +S +S + + ++ + S S+ S
Sbjct: 337 PSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSS----SSSSSSSS 392
Query: 116 ENSPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTN----- 170
+SP+P+ + S + ++S + +S+S S S SP RS SS++
Sbjct: 393 SSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---SSSSSPSPSRSSSSSSSSSSS 449
Query: 171 SSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEK 230
SS S S+ + ++SP + + + S+++ PS + SS+ SS
Sbjct: 450 SSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSPS 509
Query: 231 L 231
+
Sbjct: 510 I 510
Score = 43.1 bits (100), Expect = 0.019
Identities = 28/118 (23%), Positives = 47/118 (39%)
Query: 111 NPPSRENSPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTN 170
NP P P P++ P +S + +S+S S S S S SS++
Sbjct: 313 NPIRDVCEPLPTPSQDINSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 372
Query: 171 SSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSS 228
SSPS S+ + ++S + P + S+++ S + SS+ SS
Sbjct: 373 SSPSPSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 430
Score = 37.0 bits (84), Expect = 1.3
Identities = 35/174 (20%), Positives = 68/174 (38%), Gaps = 6/174 (3%)
Query: 56 PKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSR 115
P P++S+S + + S++S +S +S + + + + S S+ S
Sbjct: 396 PSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSRSSSS-----SSSSSSSS 450
Query: 116 ENSPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKS-GHKSPHRSKSSTNSSPS 174
+S + + + S + P ++S + +S+S S S S S SS++S
Sbjct: 451 SSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSPSI 510
Query: 175 KESACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSS 228
+ S+ P ++ NP S + + PS K SN S+
Sbjct: 511 QPSSKPVDPSPADPSNNPSSVNPSSVNPSSINSSPSIISPSVSTKTVTLSNGST 564
>gb|EAL92802.1| nucleolin protein (Nsr1), putative [Aspergillus fumigatus Af293]
Length = 546
Score = 55.5 bits (132), Expect = 4e-06
Identities = 48/214 (22%), Positives = 80/214 (36%), Gaps = 9/214 (4%)
Query: 32 EDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNG 91
E D D++ DD S + + KP +K +K A S + S S+++ E
Sbjct: 110 ESDSDEEMDDASSSESESESESEDEKPVKKDMKKESKKAESSDSESESDSESESESESES 169
Query: 92 KEGDG---DATIQADVHEHSISNPPSRENSPAPNPAKSKAEGVEKPPKAASLAKKTSTSE 148
++ + +AD E S S S E AP A K + ++ S ++ S SE
Sbjct: 170 EDEKAVKKEVKAKADTSESSESESDSDEEEEAPKKAAKKESSDSEDSESESESESESESE 229
Query: 149 GRRKVRSKSGHKSPHRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKS 208
+ +K+ S+ S +S S +S ++ + S + ++ P PK
Sbjct: 230 SEDEAPAKAKKVEKESSEESEDSDESDDSEGSDSDSSESESEKPSKKRKAEEEPAAAPKK 289
Query: 209 TATVQPSPQAK------GGFSSNVSSEKLDTLFE 236
+ G S NV E L FE
Sbjct: 290 SKKTDEEASGASANLFVGNLSWNVDEEWLRQEFE 323
>gb|AAO63898.1| unknown protein [Arabidopsis thaliana] gi|28393498|gb|AAO42170.1|
unknown protein [Arabidopsis thaliana]
gi|42568737|ref|NP_201160.2| expressed protein
[Arabidopsis thaliana]
Length = 530
Score = 55.5 bits (132), Expect = 4e-06
Identities = 63/210 (30%), Positives = 88/210 (41%), Gaps = 30/210 (14%)
Query: 30 VIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGVSTTSGASK-------LA 82
V+E + E +V +AD+ K +KRK P KR K S T K L
Sbjct: 232 VLEFLESPKETRDVIIADQEKAKKRKSTP------KRGKSGESSDTPAKRKRQTKKRDLP 285
Query: 83 SDAQPEVNGKEGDGDATIQADVHEHSISNPPSRENSPAPNPAKSKAE-GVEKPPKAASLA 141
SD E EGD D+ D HE + P + + K E VEKP K S +
Sbjct: 286 SDT--EEGKDEGDADSEGTNDPHEEDDAAPEEESDHEKTDTDDEKDEVEVEKPSKKKSSS 343
Query: 142 KKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDDN 201
KKT V SG K + S+ S+ S E + ++ +TS + A K D+
Sbjct: 344 KKT--------VEESSGSKGKDKQPSAKGSARSGEKSSKQIAKSTS----SPAKKQKVDH 391
Query: 202 PMPPPKSTATVQPS-PQAKGGFSSNVSSEK 230
+ K + QPS PQAKG +++K
Sbjct: 392 -VESSKEKSKKQPSKPQAKGSKEKGKATKK 420
>gb|AAT73677.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 826
Score = 55.1 bits (131), Expect = 5e-06
Identities = 97/443 (21%), Positives = 174/443 (38%), Gaps = 75/443 (16%)
Query: 4 GQAEVITQPSPQVISPVAHSSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPK--PAAS 61
G ++ P PQ +P + K ++ D+D+ D+D + G K P P +
Sbjct: 321 GGPKIRPDPQPQTSNPTGQTGSRKRKLVLDNDEGDDDKS--------GDKGSPNKLPKRT 372
Query: 62 ASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDAT---IQADVHEHSISNPPSRENS 118
+K+ G + +S+ SD P GK+ D T + DV E + N P+ E+
Sbjct: 373 MPKKKLAGRQMPKIRTSSRKPSDIDP--TGKDPDPAVTEPNLSKDV-EPTAENQPTAESQ 429
Query: 119 P-APNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKES 177
P + + + KA+ ++PP +G++S ++T P+
Sbjct: 430 PTSAHASDDKADPSDQPP---------------------TGNQSEATETATTQEPPTGN- 467
Query: 178 ACQETQGATSPIREAEALPGKDDNPMPPPKSTA----TVQPSPQAKGGFSSNVSSEKLDT 233
Q G I EAEA P S Q SP A+ G SS
Sbjct: 468 --QSDVGLNQEIPEAEAQATTSQGPKAGNDSVIGSPDKEQGSPHAQLGTSSGPLGG---- 521
Query: 234 LFEEDPLAALDGFLDGTLDWDSPPHQADATAETAQSSG-VANLQQIEESMGRLKAIVFD- 291
+E+ + + D PP E +Q SG V N Q+ +E + +LK ++ +
Sbjct: 522 --DEEEILRIK-----AADDSRPPILLKWWDENSQVSGIVINRQKEDEEVCQLKKVLGEA 574
Query: 292 IGFLDRIRVDPQASHAAKELLIFLLG---------QKLDSHQAAALANLQSFLVDALATF 342
++RI + +A A E L+ LG + H L++ + +
Sbjct: 575 TRIVNRIHLRNEAKTATLEKLVPHLGTLEAVRGQLHEAKEHAKKTEKELRNRIAQLQDSN 634
Query: 343 HQVKDVGQAVSLKEAKVSSGKAQVAAMKEDFKKFTARKVLIADEISDVDTK----LEELH 398
+++ +A + + A++ + Q+ A+K D + A++ E+ D K + L
Sbjct: 635 YELSGSSKAQATRMAQM---EKQIEALKRDKVELAAQRDSALKEVEDRKIKSQAQFDVLV 691
Query: 399 REIAKLEKKRADLVE-EGPAVKA 420
+I +LE R ++ P V+A
Sbjct: 692 GKIKRLEGARDEVANVAAPLVQA 714
>pir||A43427 neurofilament triplet H1 protein - rabbit (fragment)
gi|601930|gb|AAA57152.1| neurofilament-H
Length = 606
Score = 54.7 bits (130), Expect = 6e-06
Identities = 53/233 (22%), Positives = 89/233 (37%), Gaps = 11/233 (4%)
Query: 18 SPVAHSSKDK---PVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGVST 74
SP S +K PV E + +K + P+ A S ++ AK +
Sbjct: 200 SPAEAKSPEKAKSPVKEEAKSPEKAKSPAEAKSPVKEEAKSPEKAKSPEKEEAKSPAEAK 259
Query: 75 TSGASKLASDAQPEVNGK---EGDGDATIQADVHEHSIS----NPPSRENSPAPNPAKSK 127
+ +K A+ V K E ++ V E + S P +E + +P AKS
Sbjct: 260 SPEKAKSPEKAKSPVEVKSPAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSP 319
Query: 128 A-EGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPSKESACQETQGAT 186
E + P KA S K+ + S + K K KSP ++KS + + A
Sbjct: 320 VKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPEKAK 379
Query: 187 SPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDP 239
SP++E P K +P+ + SP + S + K + + ++P
Sbjct: 380 SPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKETPKKEEVKVKEP 432
Score = 47.8 bits (112), Expect = 8e-04
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 20/183 (10%)
Query: 47 DKLKGRKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHE 106
+K K PA + S ++AK K S + E E + ++ +
Sbjct: 268 EKAKSPVEVKSPAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPE-KAKSPVKEEAKS 326
Query: 107 HSISNPPSRENSPAPNPAKSKA-EGVEKPPKAASLAKKTSTSEGRRKVRSKSGH------ 159
+ P +E + +P AKS E + P KA S K+ + S + K K+
Sbjct: 327 PEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPEKAKSPVKEEA 386
Query: 160 KSPHRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDD------NPMPPPKSTATVQ 213
KSP ++K SP KE A + + A SP++E P K+ PPK
Sbjct: 387 KSPEKAK-----SPVKEEA-KSPEKAKSPVKEEAKSPEKETPKKEEVKVKEPPKKVEETA 440
Query: 214 PSP 216
P+P
Sbjct: 441 PAP 443
Score = 47.0 bits (110), Expect = 0.001
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 15/204 (7%)
Query: 29 VVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPE 88
V++E+ ++ + ++ K K + ++ +G S A A P
Sbjct: 5 VIVEEQTEEIQVTEEVTEEEEKEAKEEEGGEEEEAKSPTEGGAASPEEEAKSPAEAKSPV 64
Query: 89 VNGKEGDGDATIQADVHEHSISNPPSRENSP----APNPAKSKA---EGVEKPPKAASLA 141
+ +A A+ + + P + SP A +P K+K+ E + P +A S
Sbjct: 65 KEEAKSPAEAKSPAEAKSPAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPAEAKSPE 124
Query: 142 KKTSTSEGRRKVRSKS----GHKSPHRSKSSTNS-SPSKESACQETQG---ATSPIREAE 193
K S +E + ++KS KSP ++KS + SP K + E + A SP++E
Sbjct: 125 KAKSPAEAKSPEKAKSPVKEEAKSPEKAKSPAEAKSPEKAKSPAEAKSPEKAKSPVKEEA 184
Query: 194 ALPGKDDNPMPPPKSTATVQPSPQ 217
P K +P+ + SP+
Sbjct: 185 KSPEKAKSPVKEEAKSPAEAKSPE 208
Score = 45.4 bits (106), Expect = 0.004
Identities = 35/172 (20%), Positives = 73/172 (42%), Gaps = 8/172 (4%)
Query: 49 LKGRKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHS 108
+K + P+ A S ++ AK + + +K ++A+ K + ++ +
Sbjct: 96 VKEEAKSPEKAKSPVKEEAKSPAEAKSPEKAKSPAEAKSPEKAK-----SPVKEEAKSPE 150
Query: 109 ISNPPSRENSP--APNPAKSKA-EGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRS 165
+ P+ SP A +PA++K+ E + P K + + + + S + + +S + KSP ++
Sbjct: 151 KAKSPAEAKSPEKAKSPAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPAEAKSPEKA 210
Query: 166 KSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQ 217
KS + A SP++E P K +P + SP+
Sbjct: 211 KSPVKEEAKSPEKAKSPAEAKSPVKEEAKSPEKAKSPEKEEAKSPAEAKSPE 262
Score = 37.7 bits (86), Expect = 0.78
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 118 SPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNS-SPSKE 176
SP A S E + P +A S K+ + S K S + KSP +KS + SP KE
Sbjct: 41 SPTEGGAASPEEEAKSPAEAKSPVKEEAKSPAEAK--SPAEAKSPAEAKSPEKAKSPVKE 98
Query: 177 SACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSS 228
A + + A SP++E P + +P KS A + +AK S
Sbjct: 99 EA-KSPEKAKSPVKEEAKSPAEAKSP-EKAKSPAEAKSPEKAKSPVKEEAKS 148
Score = 34.7 bits (78), Expect = 6.6
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Query: 124 AKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNS-SPSKESACQET 182
AKS EG P+ + + + S + + +S + KSP +KS + SP K
Sbjct: 39 AKSPTEGGAASPEEEAKSPAEAKSPVKEEAKSPAEAKSPAEAKSPAEAKSPEK------- 91
Query: 183 QGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEED 238
A SP++E P K +P+ + SP+ + S EK + +E+
Sbjct: 92 --AKSPVKEEAKSPEKAKSPVKEEAKSPAEAKSPEKAKSPAEAKSPEKAKSPVKEE 145
>dbj|BAA83718.1| RNA binding protein [Homo sapiens] gi|19923466|ref|NP_057417.2|
splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 54.7 bits (130), Expect = 6e-06
Identities = 52/190 (27%), Positives = 82/190 (42%), Gaps = 20/190 (10%)
Query: 44 SLADKLKGRKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQAD 103
SL + + R P P+A + Q R A + +G+ L+S A GD
Sbjct: 2438 SLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGD-------- 2489
Query: 104 VHEHSISNP-PSRENSPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSP 162
H +S P P +S P S G ++P ++LA E R S S S
Sbjct: 2490 -HNGMLSVPAPGVPHSDVGEPPAS--TGAQQP---SALAALQPAKERRSSSSSSSSSSSS 2543
Query: 163 HRSKSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKSTA----TVQPSPQA 218
S SS++SS S S+ +++G++ P++ AL + +P P PK +P+P
Sbjct: 2544 SSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK-RVPSPTPAPKEAVREGRPPEPTPAK 2602
Query: 219 KGGFSSNVSS 228
+ SS+ SS
Sbjct: 2603 RKRRSSSSSS 2612
Score = 52.0 bits (123), Expect = 4e-05
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 57 KPAASASQKRAKGA-GVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSR 115
+P+A A+ + AK S++S +S +S + + G ++ ++ + +
Sbjct: 2517 QPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVAL 2576
Query: 116 ENSPAPNPAKSKA--EGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSP 173
+ P+P PA +A EG P A +++S+S S S S S SS++SS
Sbjct: 2577 KRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2636
Query: 174 SKESACQETQGATSPIREA-EALPGKDDNPMPPPKSTATVQP 214
S S+ + + SP + +ALP PPP + P
Sbjct: 2637 SSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSP 2678
Score = 40.0 bits (92), Expect = 0.16
Identities = 39/179 (21%), Positives = 74/179 (40%), Gaps = 11/179 (6%)
Query: 50 KGRKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSI 109
+GR R PA + + R++ + A + S ++ G+ + H +
Sbjct: 666 RGRSRSRTPARRSGRSRSR-------TPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRT- 717
Query: 110 SNPPSRENSPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSST 169
P R S + + K+K+ ++ ++ S + + R+ RS S +S +S+ S
Sbjct: 718 --PQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSL 775
Query: 170 NSSPSKESACQETQGATSPIR-EAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVS 227
S S S C + + T P R + + K + PP +S ++ P P+ K S S
Sbjct: 776 RRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQS 834
Score = 38.9 bits (89), Expect = 0.35
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 26/179 (14%)
Query: 53 KRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNP 112
+R+ + A + + K + S +S+ + Q + K+ G S S+
Sbjct: 154 QRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRG---------RRSESSS 204
Query: 113 PSRENSPAPNPAKSKAEGVEKPPKAASLAKKTST-SEGRRKVRSKSGHKSP-----HRSK 166
P RE + K ++E K K S K+ S+ +++ RS+S +P HRS
Sbjct: 205 PRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRST 264
Query: 167 SSTNSSPSKESACQETQGAT----------SPIREAEALPGKDDNPMPPPKSTATVQPS 215
S+ ++S S S + A SP A G+ D P P +T+T +PS
Sbjct: 265 SADSASSSDTSRSRSRSAAAKTHTTALAGRSP-SPASGRRGEGDAPFSEPGTTSTQRPS 322
Score = 37.4 bits (85), Expect = 1.0
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 29/238 (12%)
Query: 23 SSKDKPVVIEDDDDDDEDDNVSLADKLKGRKRKPKPAASAS-----QKRAKGAGVSTTSG 77
SS D V E ++S K+K + P P+ S S Q+++K + V + G
Sbjct: 973 SSPDTKVKPETPPRQSHSGSISPYPKVKAQT-PPGPSLSGSKSPCPQEKSKDSLVQSCPG 1031
Query: 78 ASKLASDAQPEVN-GKEGDGDATIQ-------ADVHEHSISNPPSRENSPAPNPAKSKAE 129
+ L + + G+ G +++Q + H S+P R++ +SK++
Sbjct: 1032 SLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSHSESPSLQSKSQ 1091
Query: 130 GVEKPPKAASLAKKTSTSEGRRKVRSKSGH----------KSPHRSKSSTNSSP----SK 175
K ++ S + T + R +R G SP +S+ ++SS
Sbjct: 1092 TSPKGGRSRSSSPVTELAS-RSPIRQDRGEFSASPMLKSGMSPEQSRFQSDSSSYPTVDS 1150
Query: 176 ESACQETQGATSPIREAEALPGKDDNPMPPPKSTATVQPSPQAKGGFSSNVSSEKLDT 233
S +++ T+ +E ALP ++D PP+ P P SS V + L T
Sbjct: 1151 NSLLGQSRLETAESKEKMALPPQEDATASPPRQKDKFSPFPVQDRPESSLVFKDTLRT 1208
Score = 35.8 bits (81), Expect = 3.0
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 23/163 (14%)
Query: 54 RKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPP 113
R P+P + ++R+ + S++S +S +S + + S S+
Sbjct: 2594 RPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------SSSSSS 2641
Query: 114 SRENSPAPNPAKSKAEGVEKP--PKAASLAKKTSTS-----EGRRKVRSKSGHKSPHRSK 166
S +S +P+PAK + + KP PK ++ S S + R RS S + R +
Sbjct: 2642 SSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLS-YSPVERRR 2700
Query: 167 SSTNSSPSKESACQETQGATSPIREAEALPG---KDDNPMPPP 206
S SP + + +G+ R P + + P P P
Sbjct: 2701 PSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRP 2743
Score = 35.8 bits (81), Expect = 3.0
Identities = 49/202 (24%), Positives = 69/202 (33%), Gaps = 49/202 (24%)
Query: 54 RKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQ-ADVHEHSISNP 112
R P PA S +R +G + G + + PE K+ + D E S + P
Sbjct: 294 RSPSPA---SGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRP 350
Query: 113 -PSRENS------PAPNPAKSKAEGVE--------------KPPKAASLAKKTSTSEGRR 151
PS E S PAP P ++ G PP AS
Sbjct: 351 SPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEAS------------ 398
Query: 152 KVRSKSGHKSPHR---SKSSTNSSPSKESACQETQGATSPIREAEALPGKDDNPMPPPKS 208
R +S KSP + S SS +S PS + ++SP + P P P S
Sbjct: 399 PTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSP---------ESPKPAPAPGS 449
Query: 209 TATVQPSPQAKGGFSSNVSSEK 230
+ SP +K +K
Sbjct: 450 HREISSSPTSKNRSHGRAKRDK 471
Score = 35.0 bits (79), Expect = 5.1
Identities = 48/226 (21%), Positives = 77/226 (33%), Gaps = 36/226 (15%)
Query: 50 KGRKRKPKPAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSI 109
K + R P + +S T S S +S P+V +I +
Sbjct: 805 KAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQS 864
Query: 110 SNPPSR---ENSPAPN-----PAKSKAEGVEKPPKAASLAKKTSTSEGRR---------- 151
P R E+SP P P++ G P +S + S S
Sbjct: 865 VTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIIS 924
Query: 152 -KVRSKSGHKSPHRSKSSTNSSPSKE---SACQETQ----------GATSPIREAEA-LP 196
+ RS SG SP S+ ++ ++P + S C + G++SP + + P
Sbjct: 925 PRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETP 984
Query: 197 GKDDNP---MPPPKSTATVQPSPQAKGGFSSNVSSEKLDTLFEEDP 239
+ + P PK A P P G S + D+L + P
Sbjct: 985 PRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKDSLVQSCP 1030
Score = 34.3 bits (77), Expect = 8.6
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 18/150 (12%)
Query: 58 PAASASQKRAKGAGVSTTSGASKLASDAQPEVNGKEGDGDATIQADVHEHSISNPPSREN 117
P S S +KG G S +S +S P + G S S+P +
Sbjct: 1633 PRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRG-----------SRSSPEPKTK 1681
Query: 118 SPAPNPAKSKAEGVEKPPKAASLAKKTSTSEGRRKVRSKSGHKSPHRSKSSTNSSPS--- 174
S P +S E KA L++++ ++ + RS++ P +S + SSP
Sbjct: 1682 SRTPPRRRSSRSSPELTRKAR-LSRRSRSASSSPETRSRT---PPRHRRSPSVSSPEPAE 1737
Query: 175 KESACQETQGATSPIREAEALPGKDDNPMP 204
K + + + A+SP + + G+ +P P
Sbjct: 1738 KSRSSRRRRSASSPRTKTTSRRGRSPSPKP 1767
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.307 0.125 0.334
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 759,085,616
Number of Sequences: 2540612
Number of extensions: 33230948
Number of successful extensions: 282362
Number of sequences better than 10.0: 6319
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 6185
Number of HSP's that attempted gapping in prelim test: 257248
Number of HSP's gapped (non-prelim): 21253
length of query: 471
length of database: 863,360,394
effective HSP length: 132
effective length of query: 339
effective length of database: 527,999,610
effective search space: 178991867790
effective search space used: 178991867790
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0237.4