BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0234.16
(747 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF73793.1| surface protein PspC [Streptococcus pneumoniae] 65 8e-09
gb|AAL67833.1| bromodomain-containing protein BRD4 long variant ... 63 3e-08
gb|AAG02191.1| cell proliferation related protein CAP [Mus muscu... 63 3e-08
gb|AAF73783.1| surface protein PspC [Streptococcus pneumoniae] 63 4e-08
gb|AAL90446.1| surface protein PspC [Streptococcus pneumoniae] 62 5e-08
gb|AAF73794.1| surface protein PspC [Streptococcus pneumoniae] 62 5e-08
ref|XP_343176.2| PREDICTED: similar to R31546_1 [Rattus norvegicus] 61 2e-07
gb|AAG16729.1| factor H-binding inhibitor of complement surface ... 60 2e-07
emb|CAA84230.1| extensin-like protein [Zea mays] gi|1076802|pir|... 60 3e-07
ref|NP_075579.1| gamma-aminobutyric acid A receptor, epsilon [R... 60 3e-07
gb|AAF73774.1| surface protein PspC [Streptococcus pneumoniae] 60 3e-07
dbj|BAB63322.1| KIAA0170 [Homo sapiens] 59 6e-07
emb|CAG78072.1| unnamed protein product [Yarrowia lipolytica CLI... 59 8e-07
gb|EAL17991.1| hypothetical protein CNBK3420 [Cryptococcus neofo... 59 8e-07
emb|CAE60715.1| Hypothetical protein CBG04386 [Caenorhabditis br... 59 8e-07
gb|AAA98970.1| atrophin-1 related protein [Rattus norvegicus] gi... 58 1e-06
emb|CAF90901.1| unnamed protein product [Tetraodon nigroviridis] 58 1e-06
gb|EAL89430.1| hypothetical protein Afu4g13630 [Aspergillus fumi... 58 1e-06
gb|AAM13864.1| unknown protein [Arabidopsis thaliana] 58 1e-06
gb|EAA58668.1| hypothetical protein AN6284.2 [Aspergillus nidula... 58 1e-06
>gb|AAF73793.1| surface protein PspC [Streptococcus pneumoniae]
Length = 503
Score = 65.1 bits (157), Expect = 8e-09
Identities = 89/375 (23%), Positives = 137/375 (35%), Gaps = 35/375 (9%)
Query: 195 TKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDGPPSPKKQKK 254
T K++ + ++ S + D ++K KKA S ++KP+ + P K + +
Sbjct: 119 TSKIEIQGLITTSRSKLDEAVSKYKKAPSSSSSSGSSTKPETPQP---ETSKPEVKPEPE 175
Query: 255 QVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQ- 313
+ VKP P EV ETP + ++ K V + + + P K
Sbjct: 176 TPKPEVKPEPETPKPEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKPEPETPKPE 235
Query: 314 -SSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNP----PDPLIQPHP 368
P TP PE +P +T P P +P P P P P ++P P
Sbjct: 236 VKPEPETPKPEVKPELETPKPEVKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEP 295
Query: 369 SPSKHQNVWLPELLI---QTLPQPIHLYPS-QLMLLTLLPPITLNPLENSWRSEKEKVST 424
K + PEL + P+P P + L T P + P + K +V
Sbjct: 296 ETPKPE--VKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEP-----ETPKPEVKP 348
Query: 425 LEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLA--QQVQPAPHQQQP-VQPE 481
E P P P P + EP P + +P +V+P P +P V+PE
Sbjct: 349 EPE----TPKPEVKPEPETPKPEVKPEPETPKPEVKPEPETPKPEVKPEPETPKPEVKPE 404
Query: 482 PE-PEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPET 540
PE P+ V P S+P +P +P S+ S++ AS
Sbjct: 405 PETPKPEVKPEPETPKPEVKPDNSKPQADDKKP-------STPNNLSKDKQSSNQASTNE 457
Query: 541 NLSIIPYTHLRPTSL 555
N P T+ SL
Sbjct: 458 NKKQGPATNKPKKSL 472
>gb|AAL67833.1| bromodomain-containing protein BRD4 long variant [Mus musculus]
gi|31560788|ref|NP_065254.2| bromodomain containing 4
isoform 1 [Mus musculus]
Length = 1400
Score = 63.2 bits (152), Expect = 3e-08
Identities = 112/529 (21%), Positives = 189/529 (35%), Gaps = 108/529 (20%)
Query: 243 DDGPPSPKKQKKQVRIVVKPT-RVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNL 301
D+ PP+P Q+++ ++ +V+P ++ V+ ++ +V
Sbjct: 917 DEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQQ---- 972
Query: 302 FDALPISALLKQSSNPLTPIPESQPAAQTTSPP---HSPRSSFFQ------PSPNEAPLW 352
L Q P P P+ P Q PP H P F P P + P
Sbjct: 973 --------LQPQPPPPPPPQPQPPPQQQHQPPPRPVHLPSMPFSAHIQQPPPPPGQQPTH 1024
Query: 353 NNFRTNPPDP-------LIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLL-- 403
PP P +IQ HPSP H++ ++ P P+ ++ Q+ L
Sbjct: 1025 PPPGQQPPPPQPAKPQQVIQHHPSPRHHKSDPYSAGHLREAPSPLMIHSPQMPQFQSLTH 1084
Query: 404 ---PPITLNPLEN-SWRSEKEKVSTLEEYYLTCP--SPRRYP----GPRPERLVDPD--- 450
P + P + R+E + + CP SP P RP +V P
Sbjct: 1085 QSPPQQNVQPKKQVKGRAEPQPPGPVMGQGQGCPPASPAAVPMLSQELRPPSVVQPQPLV 1144
Query: 451 ---EPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPH 507
E + +P+ ++P + ++P P P PE ++++P L
Sbjct: 1145 VVKEEKIHSPIIRSEPFSTSLRPEP----PKHPE-----------NIKAPVHL------- 1182
Query: 508 LGASEPHVQTCDIGSPQGASEAHSSNHPASP-------ETNLSIIPYTHLRPTSLSECIN 560
P ++ DIG P S+ P +P E + P L+ ++ +
Sbjct: 1183 --PQRPEMKPVDIGRPVIRPPEQSAPPPGAPDKDKQKQEPKTPVAPKKDLKIKNMGSWAS 1240
Query: 561 IFHQEASLMLCNVQGQTDLSENADYVDEEWHSLSTWLVAQVPVIMQLLHAEGSQRIEAAK 620
+ + + + +D E+ E L AQ HAE E +
Sbjct: 1241 LVQKHPTTPSSTAKSSSDSFEHFRRAAREKEEREKALKAQAE------HAEK----EKER 1290
Query: 621 QRFARRVALHEQEQRQKLLEAIEEARRKQEQAEEAARLAAAQDEQARLEAERLEAEAEAR 680
R R + +++ ++ A EEARR+QEQ + Q +Q R E ++ + +A A
Sbjct: 1291 LRQERMRSREDEDALEQARRAHEEARRRQEQQQ--------QQQQQRQEQQQQQQQAAA- 1341
Query: 681 RLAPVVFTPVASASTPANQAAQNVPSSSTHSSSSRLDTVEQRLNTHESM 729
VA+AS P Q++Q P S EQ E+M
Sbjct: 1342 ---------VAAASAPQAQSSQ--PQSMLDQQRELARKREQERRRREAM 1379
Score = 35.4 bits (80), Expect = 6.9
Identities = 87/422 (20%), Positives = 145/422 (33%), Gaps = 68/422 (16%)
Query: 186 PAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAG------QSKRKHDETSKPDDGDD 239
P P ++ K + E D+ G+K G QS+ + S PD+ +
Sbjct: 596 PPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEI 655
Query: 240 GDNDDGPPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARV---TRSSAQSSKSAVASD 296
P + ++ ++ V ++ R +P AE + + +++ + S ++S+ + +SD
Sbjct: 656 DFETLKPSTLRELERYVTSCLRKKR-KPQAEKVDVIAGSSKMKGFSSSESESTSESSSSD 714
Query: 297 DDLNLFDALPISALL---------------KQSSNPLTPIPESQ-PAAQTTSPPHSPRSS 340
+ + + P S Q P+P+ P Q PP P+
Sbjct: 715 SEDSETEMAPKSKKKGHTGRDQKKHHHHHHPQMQPAPAPVPQQPPPPPQQPPPPPPPQQQ 774
Query: 341 FFQPSPNEAP------LWNNFRTNPPD------PLIQPHP-----SPSKH-----QNVWL 378
QP P P +++PP P+++P P H ++
Sbjct: 775 QQQPPPPPPPPSMPQQTAPAMKSSPPPFITAQVPVLEPQLPGSVFDPISHFTQPILHLPQ 834
Query: 379 PELLIQTLPQPIHLYPSQL-MLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRR 437
PEL P H P L + PP N L + + L P P R
Sbjct: 835 PELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALP------PKPTR 888
Query: 438 YPGPRPERLVDP--DEPILANP----LHEADPLA-----QQVQPAPHQQQPVQPEPEPEQ 486
P P P +P +A P L + +P A Q+Q Q Q VQP
Sbjct: 889 PPAVSPALAQPPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLP 948
Query: 487 SVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPETNLSIIP 546
SV S + P PL P + + Q PQ + P +L +P
Sbjct: 949 SVKVQS--QPPPPLPPPPHPSVQQQQLQPQPPPPPPPQPQPPPQQQHQPPPRPVHLPSMP 1006
Query: 547 YT 548
++
Sbjct: 1007 FS 1008
>gb|AAG02191.1| cell proliferation related protein CAP [Mus musculus]
gi|50400639|sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing
protein 4 (Mitotic chromosome-associated protein) (MCAP)
Length = 1400
Score = 63.2 bits (152), Expect = 3e-08
Identities = 112/529 (21%), Positives = 189/529 (35%), Gaps = 108/529 (20%)
Query: 243 DDGPPSPKKQKKQVRIVVKPT-RVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNL 301
D+ PP+P Q+++ ++ +V+P ++ V+ ++ +V
Sbjct: 917 DEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQQ---- 972
Query: 302 FDALPISALLKQSSNPLTPIPESQPAAQTTSPP---HSPRSSFFQ------PSPNEAPLW 352
L Q P P P+ P Q PP H P F P P + P
Sbjct: 973 --------LQPQPPPPPPPQPQPPPQQQHQPPPRPVHLPSMPFSAHIQQPPPPPGQQPTH 1024
Query: 353 NNFRTNPPDP-------LIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLL-- 403
PP P +IQ HPSP H++ ++ P P+ ++ Q+ L
Sbjct: 1025 PPPGQQPPPPQPAKPQQVIQHHPSPRHHKSDPYSAGHLREAPSPLMIHSPQMPQFQSLTH 1084
Query: 404 ---PPITLNPLEN-SWRSEKEKVSTLEEYYLTCP--SPRRYP----GPRPERLVDPD--- 450
P + P + R+E + + CP SP P RP +V P
Sbjct: 1085 QSPPQQNVQPKKQVKGRAEPQPPGPVMGQGQGCPPASPAAVPMLSQELRPPSVVQPQPLV 1144
Query: 451 ---EPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPH 507
E + +P+ ++P + ++P P P PE ++++P L
Sbjct: 1145 VVKEEKIHSPIIRSEPFSTSLRPEP----PKHPE-----------NIKAPVHL------- 1182
Query: 508 LGASEPHVQTCDIGSPQGASEAHSSNHPASP-------ETNLSIIPYTHLRPTSLSECIN 560
P ++ DIG P S+ P +P E + P L+ ++ +
Sbjct: 1183 --PQRPEMKPVDIGRPVIRPPEQSAPPPGAPDKDKQKQEPKTPVAPKKDLKIKNMGSWAS 1240
Query: 561 IFHQEASLMLCNVQGQTDLSENADYVDEEWHSLSTWLVAQVPVIMQLLHAEGSQRIEAAK 620
+ + + + +D E+ E L AQ HAE E +
Sbjct: 1241 LVQKHPTTPSSTAKSSSDSFEHFRRAAREKEEREKALKAQAE------HAEK----EKER 1290
Query: 621 QRFARRVALHEQEQRQKLLEAIEEARRKQEQAEEAARLAAAQDEQARLEAERLEAEAEAR 680
R R + +++ ++ A EEARR+QEQ + Q +Q R E ++ + +A A
Sbjct: 1291 LRQERMRSREDEDALEQARRAHEEARRRQEQQQ--------QQQQQRQEQQQQQQQAAA- 1341
Query: 681 RLAPVVFTPVASASTPANQAAQNVPSSSTHSSSSRLDTVEQRLNTHESM 729
VA+AS P Q++Q P S EQ E+M
Sbjct: 1342 ---------VAAASAPQAQSSQ--PQSMLDQQRELARKREQERRRREAM 1379
Score = 55.8 bits (133), Expect = 5e-06
Identities = 108/481 (22%), Positives = 163/481 (33%), Gaps = 95/481 (19%)
Query: 246 PPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDAL 305
PP+ Q ++ +P V+P ++ E PA S L
Sbjct: 889 PPAVSPALAQPPLLPQPPMVQPPQVLLEDEEPPAPPLTSMQMQ----------------L 932
Query: 306 PISALLK-QSSNPLTPIP--ESQPAAQTTSPPH-SPRSSFFQPSPNEAPLWNNFRTNPPD 361
+ L K Q PL P +SQP PPH S + QP P PP
Sbjct: 933 YLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQQLQPQP------------PPP 980
Query: 362 PLIQPHPSPSKHQNVWLPELLIQTLPQPIHL--YPSQLMLLTLLPPITLNPLEN--SWRS 417
P QP P P + Q P+P+HL P + PP P +
Sbjct: 981 PPPQPQPPPQQQH---------QPPPRPVHLPSMPFSAHIQQPPPPPGQQPTHPPPGQQP 1031
Query: 418 EKEKVSTLEEYYLTCPSPRRYPG-----------PRPERLVDPDEPILANPLHEADPLAQ 466
+ + ++ PSPR + P P + P P + H++ P Q
Sbjct: 1032 PPPQPAKPQQVIQHHPSPRHHKSDPYSAGHLREAPSPLMIHSPQMPQFQSLTHQSPP-QQ 1090
Query: 467 QVQPAPHQQQPVQPEPE----------PEQSVS---------NHSSVRSPNPLVATSEPH 507
VQP + +P+P P S + SV P PLV E
Sbjct: 1091 NVQPKKQVKGRAEPQPPGPVMGQGQGCPPASPAAVPMLSQELRPPSVVQPQPLVVVKEEK 1150
Query: 508 LGA----SEPHVQTCDIGSPQGASEAHSSNH-PASPETNLSIIPYTHLRPTSLSECINIF 562
+ + SEP + P+ + H P PE I +RP S
Sbjct: 1151 IHSPIIRSEPFSTSLRPEPPKHPENIKAPVHLPQRPEMKPVDIGRPVIRPPEQSA----- 1205
Query: 563 HQEASLMLCNVQGQTDLSENADYVDEEWHSLSTW--LVAQVPVIMQLLHAEGSQRIEAAK 620
+ Q Q + A D + ++ +W LV + P S E +
Sbjct: 1206 -PPPGAPDKDKQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEHFR 1264
Query: 621 QRFARRVALHEQEQRQKLLEAIEEARRKQEQAEEAARLAAAQDEQARLEAERLEAEAEAR 680
+ A E+E+R+K L+A E K+++ R+ + +DE A +A R EA R
Sbjct: 1265 R------AAREKEEREKALKAQAEHAEKEKERLRQERMRSREDEDALEQARRAHEEARRR 1318
Query: 681 R 681
+
Sbjct: 1319 Q 1319
Score = 35.8 bits (81), Expect = 5.3
Identities = 86/422 (20%), Positives = 144/422 (33%), Gaps = 68/422 (16%)
Query: 186 PAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAG------QSKRKHDETSKPDDGDD 239
P P ++ K + E D+ G+K G QS+ + S PD+ +
Sbjct: 596 PPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEI 655
Query: 240 GDNDDGPPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARV---TRSSAQSSKSAVASD 296
P + ++ ++ V ++ R +P AE + + +++ + S ++S+ + +SD
Sbjct: 656 DFETLKPSTLRELERYVTSCLRKKR-KPQAEKVDVIAGSSKMKGFSSSESESTSESSSSD 714
Query: 297 DDLNLFDALPISALL---------------KQSSNPLTPIPESQ-PAAQTTSPPHSPRSS 340
+ + + P S Q P+P+ P Q PP P+
Sbjct: 715 SEDSETEMAPKSKKKGHTGRDQKKHHHHHHPQMQPAPAPVPQQPPPPPQQPPPPPPPQQQ 774
Query: 341 FFQPSPNEAP------LWNNFRTNPPD------PLIQPHPSPSKHQNVWLPELLIQTLPQ 388
QP P P +++PP P+++P S + I LPQ
Sbjct: 775 QQQPPPPPPPPSMPQQTAPAMKSSPPPFITAQVPVLEPQLPGSVFDPIGHFTQPILHLPQ 834
Query: 389 ----------PIHLYPSQL-MLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRR 437
P H P L + PP N L + + L P P R
Sbjct: 835 PELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALP------PKPTR 888
Query: 438 YPGPRP----------ERLVDPDEPILANPLHEADPL-AQQVQPAPHQQQPVQPEPEPEQ 486
P P +V P + +L + A PL + Q+Q Q Q VQP
Sbjct: 889 PPAVSPALAQPPLLPQPPMVQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLP 948
Query: 487 SVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPETNLSIIP 546
SV S + P PL P + + Q PQ + P +L +P
Sbjct: 949 SVKVQS--QPPPPLPPPPHPSVQQQQLQPQPPPPPPPQPQPPPQQQHQPPPRPVHLPSMP 1006
Query: 547 YT 548
++
Sbjct: 1007 FS 1008
>gb|AAF73783.1| surface protein PspC [Streptococcus pneumoniae]
Length = 503
Score = 62.8 bits (151), Expect = 4e-08
Identities = 88/375 (23%), Positives = 136/375 (35%), Gaps = 35/375 (9%)
Query: 195 TKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDGPPSPKKQKK 254
T ++ + ++ S + D ++K KKA S ++KP+ + P K + +
Sbjct: 119 TSTIEIQGLITTSRSKLDEAVSKYKKAPSSSSSSGSSTKPETPQP---ETSKPEVKPEPE 175
Query: 255 QVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQ- 313
+ VKP P EV ETP + ++ K V + + + P K
Sbjct: 176 TPKPEVKPEPETPKPEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKPEPETPKPE 235
Query: 314 -SSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNP----PDPLIQPHP 368
P TP PE +P +T P P +P P P P P ++P P
Sbjct: 236 VKPEPETPKPEVKPELETPKPEVKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEP 295
Query: 369 SPSKHQNVWLPELLI---QTLPQPIHLYPS-QLMLLTLLPPITLNPLENSWRSEKEKVST 424
K + PEL + P+P P + L T P + P + K +V
Sbjct: 296 ETPKPE--VKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEP-----ETPKPEVKP 348
Query: 425 LEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLA--QQVQPAPHQQQP-VQPE 481
E P P P P + EP P + +P +V+P P +P V+PE
Sbjct: 349 EPE----TPKPEVKPEPETPKPEVKPEPETPKPEVKPEPETPKPEVKPEPETPKPEVKPE 404
Query: 482 PE-PEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPET 540
PE P+ V P S+P +P +P S+ S++ AS
Sbjct: 405 PETPKPEVKPEPETPKPEVKPDNSKPQADDKKP-------STPNNLSKDKQSSNQASTNE 457
Query: 541 NLSIIPYTHLRPTSL 555
N P T+ SL
Sbjct: 458 NKKQGPATNKPKKSL 472
>gb|AAL90446.1| surface protein PspC [Streptococcus pneumoniae]
Length = 592
Score = 62.4 bits (150), Expect = 5e-08
Identities = 91/373 (24%), Positives = 135/373 (35%), Gaps = 51/373 (13%)
Query: 195 TKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDGPPSPKKQKK 254
T+K Q + ++ +S + D +K K S ++KP+ P +PK + K
Sbjct: 228 TQKAQLQKLIAESQSKLDEAFSKFKNGLSSSSNSGSSTKPETPQ-------PETPKPEVK 280
Query: 255 QVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQS 314
KP P EV +ETP + ++ K V + + + P
Sbjct: 281 PELETPKPELETPKPEVKPELETPKPEVKPEPETPKPEVKPELETPKPEVKP-------- 332
Query: 315 SNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPH-PSPSKH 373
P TP PE +P +T P P P P P P P ++P +P
Sbjct: 333 -EPETPKPEVKPEPETPKPEVKPELE--TPKPEVKP-----EPETPKPEVKPELETPKPE 384
Query: 374 QNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCP 433
PEL P+P + P L T P + P E K E L P
Sbjct: 385 LETPKPEL---ETPKP-EVKPE---LETPKPEVKPEP-------ETPKPEVKPE--LETP 428
Query: 434 SPRRYPGPR-PERLVDPD----EPILANPLHEADPLAQ----QVQPAPHQQQP-VQPEPE 483
P P P P+ V P+ +P L P E P + +V+P P +P V+PEPE
Sbjct: 429 KPEVKPEPETPKPEVKPELETPKPELETPKPEVKPELETPKPEVKPEPETPKPEVKPEPE 488
Query: 484 -PEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPETNL 542
P+ + P + E S+P +P S+ S++ AS N
Sbjct: 489 TPKPELETPKPEVKPELEIPKPEVKPDNSKPQADDKKPSTPNNLSKDKQSSNQASTNENK 548
Query: 543 SIIPYTHLRPTSL 555
P T+ SL
Sbjct: 549 KQGPATNKPKKSL 561
>gb|AAF73794.1| surface protein PspC [Streptococcus pneumoniae]
Length = 500
Score = 62.4 bits (150), Expect = 5e-08
Identities = 88/375 (23%), Positives = 136/375 (35%), Gaps = 38/375 (10%)
Query: 195 TKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDGPPSPKKQKK 254
T ++ + ++ S + D ++K KKA S ++KP+ + P K + +
Sbjct: 119 TSTIEIQGLITTSRSKLDEAVSKYKKAPSSSSSSGSSTKPEP------ETSKPEVKPEPE 172
Query: 255 QVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQ- 313
+ VKP P EV ETP + ++ K V + + + P K
Sbjct: 173 TPKPEVKPEPGTPKPEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKPEPETPKPE 232
Query: 314 -SSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNP----PDPLIQPHP 368
P TP PE +P +T P P +P P P P P ++P P
Sbjct: 233 VKPEPETPKPEVKPELETPKPEVKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEP 292
Query: 369 SPSKHQNVWLPELLI---QTLPQPIHLYPS-QLMLLTLLPPITLNPLENSWRSEKEKVST 424
K + PEL + P+P P + L T P + P + K +V
Sbjct: 293 ETPKPE--VKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEP-----ETPKPEVKP 345
Query: 425 LEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLA--QQVQPAPHQQQP-VQPE 481
E P P P P + EP P + +P +V+P P +P V+PE
Sbjct: 346 EPE----TPKPEVKPEPETPKPEVKPEPETPKPEVKPEPETPKPEVKPEPETPKPEVKPE 401
Query: 482 PE-PEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPET 540
PE P+ V P S+P +P +P S+ S++ AS
Sbjct: 402 PETPKPEVKPEPETPKPEVKPDNSKPQADDKKP-------STPNNLSKDKQSSNQASTNE 454
Query: 541 NLSIIPYTHLRPTSL 555
N P T+ SL
Sbjct: 455 NKKQGPATNKPKKSL 469
>ref|XP_343176.2| PREDICTED: similar to R31546_1 [Rattus norvegicus]
Length = 1440
Score = 60.8 bits (146), Expect = 2e-07
Identities = 97/472 (20%), Positives = 162/472 (33%), Gaps = 97/472 (20%)
Query: 243 DDGPPSPKKQKKQVRIVVKPT-RVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNL 301
D+ PP+P Q+++ ++ +V+P ++ V+ ++ +V
Sbjct: 1007 DEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQQ---- 1062
Query: 302 FDALPISALLKQSSNPLTPIPESQPAAQTTSPP---HSPRSSFFQPSPNEAPLWNNFRTN 358
L +Q P P P+ P Q PP H P F P T+
Sbjct: 1063 --------LQQQPPPPPPPQPQPPPQQQHQPPPRPVHLPSMPFSAHIQQPPPPTGQQPTH 1114
Query: 359 PPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSE 418
PP P P P+K P+ +IQ P P H +S+
Sbjct: 1115 PPPGQQPPPPQPAK------PQQVIQHHPSPRH-----------------------HKSD 1145
Query: 419 KEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQP- 477
L E P P + P P + H++ P Q VQP + +P
Sbjct: 1146 PYSAGHLRE------------APSPLMIHSPQMPQFQSLTHQSPP-QQNVQPKKQELRPP 1192
Query: 478 --VQPEP---EPEQSVSNHSSVRSPNPLVATSEP-------------HLGASEPHVQTCD 519
VQP+P E+ + HS + P + P HL P ++ D
Sbjct: 1193 SVVQPQPLVVVKEEKI--HSPIIRSEPFSTSLRPEPPKHPENMKAPVHL-PQRPEMKPVD 1249
Query: 520 IGSPQGASEAHSSNHPASP-------ETNLSIIPYTHLRPTSLSECINIFHQEASLMLCN 572
+G P S+ P +P E + P L+ ++ ++ + +
Sbjct: 1250 VGRPVIRPPEQSAPPPGAPDKDKQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSST 1309
Query: 573 VQGQTDLSENADYVDEEWHSLSTWLVAQVPVIMQLLHAEGSQRIEAAKQRFARRVALHEQ 632
+ +D E+ E L AQ HAE E + R R + ++
Sbjct: 1310 AKSSSDSFEHFRRAAREKEEREKALKAQAE------HAEK----EKERLRQERMRSREDE 1359
Query: 633 EQRQKLLEAIEEARRKQEQAEEAARLAAAQDEQARLEAERLEAEAEARRLAP 684
+ ++ A EEARR+QEQ ++ R Q +Q + A + +A+ P
Sbjct: 1360 DALEQARRAHEEARRRQEQQQQQQRQEQQQQQQQQAAAVAAASAPQAQSSQP 1411
Score = 58.2 bits (139), Expect = 1e-06
Identities = 109/489 (22%), Positives = 165/489 (33%), Gaps = 76/489 (15%)
Query: 246 PPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDAL 305
PP+ Q ++ +P +P ++ E PA S L
Sbjct: 979 PPAVSPALAQPPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQ----------------L 1022
Query: 306 PISALLK-QSSNPLTPIP--ESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDP 362
+ L K Q PL P +SQP PPH PS + L PP P
Sbjct: 1023 YLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPH--------PSVQQQQLQQQ---PPPPP 1071
Query: 363 LIQPHPSPSKHQNVWLPELLIQTLPQPIHL--YPSQLMLLTLLPPITLNPLENSWRSEKE 420
QP P P + Q P+P+HL P + PP P +
Sbjct: 1072 PPQPQPPPQQQH---------QPPPRPVHLPSMPFSAHIQQPPPPTGQQPTHPPPGQQPP 1122
Query: 421 KVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEA-------DPLAQQVQPAPH 473
+ + + +P PR + +P A L EA P Q Q H
Sbjct: 1123 PPQPAKPQQVI----QHHPSPRHHK----SDPYSAGHLREAPSPLMIHSPQMPQFQSLTH 1174
Query: 474 QQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGA----SEPHVQTCDIGSPQGASEA 529
Q P Q +P++ SV P PLV E + + SEP + P+
Sbjct: 1175 QSPP-QQNVQPKKQELRPPSVVQPQPLVVVKEEKIHSPIIRSEPFSTSLRPEPPKHPENM 1233
Query: 530 HSSNH-PASPETNLSIIPYTHLRPTSLSECINIFHQEASLMLCNVQGQTDLSENADYVDE 588
+ H P PE + +RP S + Q Q + A D
Sbjct: 1234 KAPVHLPQRPEMKPVDVGRPVIRPPEQSA------PPPGAPDKDKQKQEPKTPVAPKKDL 1287
Query: 589 EWHSLSTW--LVAQVPVIMQLLHAEGSQRIEAAKQRFARRVALHEQEQRQKLLEAIEEAR 646
+ ++ +W LV + P S E ++ A E+E+R+K L+A E
Sbjct: 1288 KIKNMGSWASLVQKHPTTPSSTAKSSSDSFEHFRR------AAREKEEREKALKAQAEHA 1341
Query: 647 RKQEQAEEAARLAAAQDEQARLEAERLEAEAEARRLAPVVFTPVASASTPANQAAQNVPS 706
K+++ R+ + +DE A +A R EA R+ QAA +
Sbjct: 1342 EKEKERLRQERMRSREDEDALEQARRAHEEARRRQEQQQQQQRQEQQQQQQQQAAAVAAA 1401
Query: 707 SSTHSSSSR 715
S+ + SS+
Sbjct: 1402 SAPQAQSSQ 1410
>gb|AAG16729.1| factor H-binding inhibitor of complement surface protein PspC
[Streptococcus pneumoniae]
Length = 612
Score = 60.5 bits (145), Expect = 2e-07
Identities = 88/377 (23%), Positives = 137/377 (35%), Gaps = 39/377 (10%)
Query: 195 TKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDGPPSPKKQKK 254
T+K Q + ++ +S + D +K K S ++KP+ + P K + +
Sbjct: 228 TQKAQLQKLIAESQSKLDEAFSKFKNGLSSSSNSGSSTKPETPQP---ETPKPEVKPELE 284
Query: 255 QVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQ- 313
+ VKP P EV ETP + ++ K V + + + P K
Sbjct: 285 TPKPEVKPEPETPKPEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKPEPETPKPE 344
Query: 314 -SSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNP----PDPLIQPHP 368
P TP PE +P +T P P +P P P P P ++P P
Sbjct: 345 VKPEPETPKPEVKPELETPKPEVKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEP 404
Query: 369 SPSKHQNVWLPELLI---QTLPQPIHLYPS-QLMLLTLLPPITLNPLENSWRSEKEKVST 424
K + PEL + P+P P + L T P + P + K +V
Sbjct: 405 ETPKPE--VKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEP-----ETPKPEVKP 457
Query: 425 LEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQ----QVQPAPHQQQP-VQ 479
E +P+ P PE +P L P E P + +V+P P +P V+
Sbjct: 458 EPE------TPKPEVKPEPETPKPEVKPELETPKPEVKPELETPKPEVKPEPETPKPEVK 511
Query: 480 PEPE-PEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASP 538
PE E P+ V + P S+P +P +P S+ S++ AS
Sbjct: 512 PELETPKPEVKPELEIPKPEVKPDNSKPQADDKKP-------STPNNLSKDKQSSNQAST 564
Query: 539 ETNLSIIPYTHLRPTSL 555
N P T+ SL
Sbjct: 565 NENKKQGPATNKPKKSL 581
Score = 42.7 bits (99), Expect = 0.043
Identities = 48/188 (25%), Positives = 66/188 (34%), Gaps = 22/188 (11%)
Query: 186 PAPEFDP-PLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDD 244
P PE P P T K + K LE E L K + ET KP+ + +
Sbjct: 341 PKPEVKPEPETPKPEVKPELETPKPEVKPELETPKP---EVKPEPETPKPEVKPELETPK 397
Query: 245 GPPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDA 304
P K + + + VKP P EV ETP + ++ K V + + +
Sbjct: 398 --PEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEV 455
Query: 305 LPISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLI 364
P P TP PE +P +T P P P P P P P +
Sbjct: 456 KP---------EPETPKPEVKPEPETPKPEVKPELE--TPKPEVKP-----ELETPKPEV 499
Query: 365 QPHPSPSK 372
+P P K
Sbjct: 500 KPEPETPK 507
>emb|CAA84230.1| extensin-like protein [Zea mays] gi|1076802|pir||S49915 extensin-like
protein - maize gi|1096557|prf||2111476A extensin-like
domain
Length = 1188
Score = 59.7 bits (143), Expect = 3e-07
Identities = 90/387 (23%), Positives = 136/387 (34%), Gaps = 53/387 (13%)
Query: 185 PPAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDD 244
PPAP+ PPL + + + PL+ A +S H S P
Sbjct: 795 PPAPKSSPPLAPVSSPPQV--EKTSPPPAPLSSPPLAPKSSPPHVVVSSPPPVV---KSS 849
Query: 245 GPPSPKKQKKQV-RIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNL-- 301
PP+P + P V EV++ PA T S S + ++L
Sbjct: 850 PPPAPVSSPPLTPKPASPPAHVSSPPEVVKPSTPPAPTTVISPPSEPKSSPPPTPVSLPP 909
Query: 302 --FDALPISALLKQSSNPLTP---------------IPESQPAAQTTSPPHSPRSSFFQP 344
+ P A++ SS P+TP + S P A +SPP +P+SS P
Sbjct: 910 PIVKSSPPPAMV--SSPPMTPKSSPPPVVVSSPPPTVKSSPPPAPVSSPPATPKSSP-PP 966
Query: 345 SPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLP 404
+P P + PP P+ P P+P P + + P P P ++ P
Sbjct: 967 APVNLPPPEVKSSPPPTPVSSPPPAPKSSP----PPAPMSSPPPPEVKSPPPPAPVSSPP 1022
Query: 405 PITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPL 464
P +P + S P P + P P P + P P+ + P P+
Sbjct: 1023 PPVKSPPPPAPVSSP-------------PPPVKSP-PPPAPVSSPPPPVKSPP--PPAPI 1066
Query: 465 AQQVQP--APHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEP---HVQTCD 519
+ P +P PV P P +S + V SP P + + P S P V+
Sbjct: 1067 SSPPPPVKSPPPPAPVSSPPPPVKSPPPPAPVSSPPPPIKSPPPPAPVSSPPPAPVKPPS 1126
Query: 520 IGSPQGASEAHSSNHPASPETNLSIIP 546
+ P S PA P+ +P
Sbjct: 1127 LPPPAPVSSPPPVVTPAPPKKEEQSLP 1153
Score = 49.7 bits (117), Expect = 4e-04
Identities = 66/250 (26%), Positives = 98/250 (38%), Gaps = 46/250 (18%)
Query: 312 KQSSNPLTPIPESQPAAQTTSP--PHSPRSSFFQPSPNEAPLWNNFRTN----PPDPLIQ 365
++S P T IP P + T P P P SS +PSP + P+ + +T PP P+
Sbjct: 684 EKSLPPPTLIPSPPPQEKPTPPSTPSKPPSSPEKPSPPKEPVSSPPQTPKSSPPPAPVSS 743
Query: 366 PHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTL 425
P P+P P L + P + P PP PL + + + K S
Sbjct: 744 PPPTPVSSP----PALAPVSSPPSVKSSP---------PPA---PLSSPPPAPQVKSS-- 785
Query: 426 EEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPE 485
P P + P P P +++P P ++ P P P+ P
Sbjct: 786 -------PPPVQVSSPPPAPKSSPPLAPVSSP-----PQVEKTSPPP---APLSSPPLAP 830
Query: 486 QSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGAS-EAHSSNHPASPETNLSI 544
+S H V SP P+V +S P S P + +P+ AS AH S+ P + +
Sbjct: 831 KSSPPHVVVSSPPPVVKSSPPPAPVSSPPL------TPKPASPPAHVSSPPEVVKPSTPP 884
Query: 545 IPYTHLRPTS 554
P T + P S
Sbjct: 885 APTTVISPPS 894
Score = 46.6 bits (109), Expect = 0.003
Identities = 64/274 (23%), Positives = 97/274 (35%), Gaps = 45/274 (16%)
Query: 315 SNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKH- 373
++P P+ P SPP P P P ++P ++PP P P P P
Sbjct: 605 ASPPPPVKSPPPPTPVASPP-PPAPVASSPPPMKSPPPPTPVSSPPPPEKSPPPPPPAKS 663
Query: 374 ----QNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSE----------- 418
+ P +++ P P P ++ + PP P S S+
Sbjct: 664 TPPPEEYPTPPTSVKSSPPPEKSLPPPTLIPS--PPPQEKPTPPSTPSKPPSSPEKPSPP 721
Query: 419 KEKVSTLEEYYLTCPSPRRYPGPRPERLVDPD--EPILANPLHEAD---------PLAQQ 467
KE VS+ + + P P P P + P P+ + P ++ P A Q
Sbjct: 722 KEPVSSPPQTPKSSPPPAPVSSPPPTPVSSPPALAPVSSPPSVKSSPPPAPLSSPPPAPQ 781
Query: 468 VQPAPHQQQPVQPEPEPEQS-----VSNHSSVRSPNPLVA----------TSEPHLGASE 512
V+ +P Q P P P+ S VS+ V +P A +S PH+ S
Sbjct: 782 VKSSPPPVQVSSPPPAPKSSPPLAPVSSPPQVEKTSPPPAPLSSPPLAPKSSPPHVVVSS 841
Query: 513 PHVQTCDIGSPQGASEAHSSNHPASPETNLSIIP 546
P P S + PASP ++S P
Sbjct: 842 PPPVVKSSPPPAPVSSPPLTPKPASPPAHVSSPP 875
Score = 45.1 bits (105), Expect = 0.009
Identities = 55/204 (26%), Positives = 80/204 (38%), Gaps = 29/204 (14%)
Query: 303 DALPISALLKQSSNPLT-PIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNN----FRT 357
D +P + + S P T P P+ QP A +T PP S + SP +AP+ + T
Sbjct: 469 DYVPPTPPVPGKSPPATSPSPQVQPPAASTPPP-----SLVKLSPPQAPVGSPPPPVKTT 523
Query: 358 NPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRS 417
+PP P+ P P P + + + P P+ P + + PP P S
Sbjct: 524 SPPAPIGSPSPPPP---------VSVVSPPPPVKSPPPPAPVGSPPPPEKSPPPPAPVAS 574
Query: 418 EKEKVSTLEEYYLTC--PSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQ 475
V + L P P + P P P + P P+ + P P+A PAP
Sbjct: 575 PPPPVKSPPPPTLVASPPPPVKSPPP-PAPVASPPPPVKSPP--PPTPVASPPPPAP--- 628
Query: 476 QPVQPEPEPEQSVSNHSSVRSPNP 499
V P P +S + V SP P
Sbjct: 629 --VASSPPPMKSPPPPTPVSSPPP 650
Score = 44.3 bits (103), Expect = 0.015
Identities = 53/206 (25%), Positives = 79/206 (37%), Gaps = 24/206 (11%)
Query: 317 PLTPIPESQPAAQTTSP-PHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQN 375
P +P+P +PAA P PH+P +P P +P+ P P+ PH P+
Sbjct: 417 PSSPVP-GKPAASAPMPSPHTPPDVSPEPLPEPSPV----PAPAPMPMPTPHSPPADDYV 471
Query: 376 VWLPELLIQTLPQPIHLYPSQLMLLTLLPP--ITLNPLENSWRSEKEKVSTLEEYYLTCP 433
P + ++ P Q + PP + L+P + S V T P
Sbjct: 472 PPTPPVPGKSPPATSPSPQVQPPAASTPPPSLVKLSPPQAPVGSPPPPVKTTSP-----P 526
Query: 434 SPRRYPGPRPE-RLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQP-----EPEPEQS 487
+P P P P +V P P+ + P P A P P ++ P P P P +S
Sbjct: 527 APIGSPSPPPPVSVVSPPPPVKSPP-----PPAPVGSPPPPEKSPPPPAPVASPPPPVKS 581
Query: 488 VSNHSSVRSPNPLVATSEPHLGASEP 513
+ V SP P V + P + P
Sbjct: 582 PPPPTLVASPPPPVKSPPPPAPVASP 607
Score = 42.4 bits (98), Expect = 0.056
Identities = 71/310 (22%), Positives = 108/310 (33%), Gaps = 15/310 (4%)
Query: 246 PPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDAL 305
PP K PT V+ + + + P + Q + ++
Sbjct: 658 PPPAKSTPPPEEYPTPPTSVKSSPPPEKSLPPPTLIPSPPPQEKPTPPSTPSKPPSSPEK 717
Query: 306 PISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQ 365
P SS P TP S P A +SPP +P SS +P +P + + PP PL
Sbjct: 718 PSPPKEPVSSPPQTP-KSSPPPAPVSSPPPTPVSSPPALAPVSSPP-SVKSSPPPAPLSS 775
Query: 366 PHPSPSKHQN-----VWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKE 420
P P+P + V P ++ P + + T PP L+ + +S
Sbjct: 776 PPPAPQVKSSPPPVQVSSPPPAPKSSPPLAPVSSPPQVEKTSPPPAPLSSPPLAPKSSPP 835
Query: 421 KVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPA--PHQQQPV 478
V + SP P P P P P H + P + V+P+ P +
Sbjct: 836 HVVVSSPPPVVKSSPPPAPVSSPPLTPKPASP----PAHVSSP-PEVVKPSTPPAPTTVI 890
Query: 479 QPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASP 538
P EP+ S + V P P+V +S P S P + P S + + P
Sbjct: 891 SPPSEPKSSPPP-TPVSLPPPIVKSSPPPAMVSSPPMTPKSSPPPVVVSSPPPTVKSSPP 949
Query: 539 ETNLSIIPYT 548
+S P T
Sbjct: 950 PAPVSSPPAT 959
Score = 37.7 bits (86), Expect = 1.4
Identities = 60/246 (24%), Positives = 83/246 (33%), Gaps = 40/246 (16%)
Query: 185 PPAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDD 244
PPAP PP T K S P+N +S S P
Sbjct: 949 PPAPVSSPPATPK----------SSPPPAPVNLPPPEVKSSPPPTPVSSPPPAP---KSS 995
Query: 245 GPPSPKKQKK--QVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKS----AVASDDD 298
PP+P +V+ P V ++ PA V+ S KS A S
Sbjct: 996 PPPAPMSSPPPPEVKSPPPPAPVSSPPPPVKSPPPPAPVS-SPPPPVKSPPPPAPVSSPP 1054
Query: 299 LNLFDALPISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTN 358
+ P + + S+P P+ P A +SPP P S P+P +P
Sbjct: 1055 PPVKSPPPPAPI----SSPPPPVKSPPPPAPVSSPP-PPVKSPPPPAPVSSPPPPIKSPP 1109
Query: 359 PPDPLIQPHPSPSKHQNVWLPELLI---------------QTLPQPIHLYPSQLMLLTLL 403
PP P+ P P+P K ++ P + Q+LP P P +L
Sbjct: 1110 PPAPVSSPPPAPVKPPSLPPPAPVSSPPPVVTPAPPKKEEQSLPPPAESQPPPSFNDIIL 1169
Query: 404 PPITLN 409
PPI N
Sbjct: 1170 PPIMAN 1175
>ref|NP_075579.1| gamma-aminobutyric acid A receptor, epsilon [Rattus norvegicus]
gi|7861743|gb|AAF70383.1| GABA-A receptor epsilon-like
subunit [Rattus norvegicus]
Length = 989
Score = 59.7 bits (143), Expect = 3e-07
Identities = 67/242 (27%), Positives = 86/242 (34%), Gaps = 31/242 (12%)
Query: 322 PESQPAAQTTSPPHSPRSSFF----QPSP-NEAPLWNNFRTNPPDPLIQPHPSPSKHQNV 376
P+ QP Q PP SP QP P +E+P ++ ++ P PL QP P P
Sbjct: 40 PQPQPVPQPLIPPESPAGDDVVFDSQPQPQSESPGHDDVFSSQPQPLPQPQPLPEPQP-- 97
Query: 377 WLPELLIQTLPQPI-HLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSP 435
LPE Q PQP P L LP PL + + E E P P
Sbjct: 98 -LPEPEPQPQPQPQPQPQPQPLAGRQPLPQPLPWPLP---QPQPEPEPQPEPQPEPQPEP 153
Query: 436 RRYPGPRPERLVDPDEPILANPLHEADPLAQQV-----QPAPHQQQPVQPEPEPEQSVSN 490
+ P P P+ P+ PL PL + +P P Q QPEP+PE
Sbjct: 154 QPEPQPEPQPEPQPEPQPQPQPLAGRQPLPWPLPLPLPEPQPDPQPDPQPEPQPEPQPEP 213
Query: 491 HSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPETNLSIIPYTHL 550
++P + A +P PQ H P PE L L
Sbjct: 214 QPQPQTPGQVQAGRQPR-------------PKPQPDPHPHPQPEP-QPEPRLHPFHRLRL 259
Query: 551 RP 552
RP
Sbjct: 260 RP 261
Score = 52.8 bits (125), Expect = 4e-05
Identities = 48/171 (28%), Positives = 62/171 (36%), Gaps = 8/171 (4%)
Query: 320 PIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVW-L 378
P PE QP Q P +P P PL P PL P P P +
Sbjct: 145 PQPEPQPEPQPEPQPEPQPEPQPEPQPQPQPLAGRQPLPWPLPLPLPEPQPDPQPDPQPE 204
Query: 379 PELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYY----LTCPS 434
P+ Q PQP P Q+ P + E + L ++ P
Sbjct: 205 PQPEPQPEPQPQPQTPGQVQAGRQPRPKPQPDPHPHPQPEPQPEPRLHPFHRLRLRPHPY 264
Query: 435 PRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPE 485
P +PGP+PE +P+ P E P + QP P Q +PEPEPE
Sbjct: 265 PEPHPGPQPEPEPEPEPEPQPEPQPEPQP---EPQPEPEPQPEPEPEPEPE 312
Score = 47.8 bits (112), Expect = 0.001
Identities = 58/238 (24%), Positives = 69/238 (28%), Gaps = 38/238 (15%)
Query: 320 PIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLP 379
P PE +P + P QP P P P+P +P P P P
Sbjct: 321 PEPEPEPEPEPEPEPEPEPEPEPQPEPEPEPEPEPEPEPEPEPEPEPQPEPQPEPE---P 377
Query: 380 ELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYP 439
E Q PQP E E E P P P
Sbjct: 378 EPEPQPEPQP------------------------EPEPEPEPEPEPEPEPEPEPQPEPQP 413
Query: 440 GPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSV----- 494
P P+ PD P E P +P P Q QPEPEPE S +
Sbjct: 414 EPEPQPEPQPDPEPQPEPGPEPGP-----EPEPEPQLEPQPEPEPEPQPEPESELDLEPE 468
Query: 495 RSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPETNLSIIPYTHLRP 552
P PL EP + P+ E P PE L + P + L P
Sbjct: 469 PEPQPLPEPQPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP-EPEPELELEPQSQLEP 525
Score = 47.4 bits (111), Expect = 0.002
Identities = 73/294 (24%), Positives = 102/294 (33%), Gaps = 34/294 (11%)
Query: 251 KQKKQVRIVVKPTRVEPAAEVIRRVETPAR--VTRSSAQSSKSAVASDDDLNLFDALPIS 308
K Q ++V P + +P + + E+PA V S +S DD+ P+
Sbjct: 29 KPPAQDKVVFGP-QPQPVPQPLIPPESPAGDDVVFDSQPQPQSESPGHDDVFSSQPQPLP 87
Query: 309 ALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNP---PDPLIQ 365
P PE QP Q P + QP P P W + P P P Q
Sbjct: 88 QPQPLPEPQPLPEPEPQPQPQPQPQPQPQPLAGRQPLPQPLP-WPLPQPQPEPEPQPEPQ 146
Query: 366 PHPSPS---KHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKV 422
P P P + Q PE + PQP L Q + L P+ L + + +
Sbjct: 147 PEPQPEPQPEPQPEPQPEPQPEPQPQPQPLAGRQPLPWPL--PLPLPEPQPDPQPD---- 200
Query: 423 STLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEP 482
P P P P+PE P P + P + QP PH +P+P
Sbjct: 201 ----------PQPEPQPEPQPEPQPQPQTPGQVQAGRQPRP---KPQPDPHPHPQPEPQP 247
Query: 483 EPEQSVSNHSSVRSPNPLVATSEPHLGAS-EPHVQTCDIGSPQGASEAHSSNHP 535
EP + +R P+P EPH G EP + P+ E P
Sbjct: 248 EPRLHPFHRLRLR-PHPY---PEPHPGPQPEPEPEPEPEPQPEPQPEPQPEPQP 297
Score = 46.2 bits (108), Expect = 0.004
Identities = 52/183 (28%), Positives = 65/183 (35%), Gaps = 21/183 (11%)
Query: 320 PIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLP 379
P PE QP Q P QP P P P+P QP P P P
Sbjct: 363 PEPEPQPEPQPEPEPEPEPQPEPQPEPEPEPEPEPEPEPEPEPEPQPEPQPEPEPQ---P 419
Query: 380 ELLIQTLPQPIHLYPSQLMLLTLLPPITLNPL---ENSWRSEKEKVSTLEEYYLTCPSPR 436
E PQP P P L P E + E E LE P P+
Sbjct: 420 EPQPDPEPQP---EPGPEPGPEPEPEPQLEPQPEPEPEPQPEPESELDLEPE----PEPQ 472
Query: 437 RYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRS 496
P P+PE +P+ P E +P + +P P + +PEPEPE + S +
Sbjct: 473 PLPEPQPEPEPEPEP----EPEPEPEP---EPEPEPEPEPEPEPEPEPELELEPQSQL-E 524
Query: 497 PNP 499
P P
Sbjct: 525 PQP 527
Score = 45.8 bits (107), Expect = 0.005
Identities = 47/167 (28%), Positives = 61/167 (36%), Gaps = 16/167 (9%)
Query: 320 PIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLP 379
P+PE QP Q P QP P P P +P P P H P
Sbjct: 189 PLPEPQPDPQPDPQPEPQPEP--QPEPQPQPQTPGQVQAGRQPRPKPQPDPHPHPQ---P 243
Query: 380 ELLIQTLPQPI-HLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRY 438
E PQP L+P + L P +P + E E E P P+
Sbjct: 244 E------PQPEPRLHPFHRLRLRPHPYPEPHP---GPQPEPEPEPEPEPQPEPQPEPQPE 294
Query: 439 PGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPE 485
P P PE +P+ P E +P + +P P + +PEPEPE
Sbjct: 295 PQPEPEPQPEPEPEPEPEPEPEPEP-EPEPEPEPEPEPEPEPEPEPE 340
Score = 41.2 bits (95), Expect = 0.13
Identities = 47/178 (26%), Positives = 59/178 (32%), Gaps = 38/178 (21%)
Query: 320 PIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWN-----NFRTNP-------PDPLIQPH 367
P PE QP QT + R +P P+ P R +P P P +PH
Sbjct: 209 PQPEPQPQPQTPGQVQAGRQPRPKPQPDPHPHPQPEPQPEPRLHPFHRLRLRPHPYPEPH 268
Query: 368 PSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEE 427
P P PE Q PQP E + E E
Sbjct: 269 PGPQPEPEPE-PEPEPQPEPQP----------------------EPQPEPQPEPEPQPEP 305
Query: 428 YYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPE 485
P P P P PE +P+ P E +P + QP P + +PEPEPE
Sbjct: 306 EPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP---EPQPEPEPEPEPEPEPEPE 360
>gb|AAF73774.1| surface protein PspC [Streptococcus pneumoniae]
Length = 536
Score = 59.7 bits (143), Expect = 3e-07
Identities = 88/393 (22%), Positives = 139/393 (34%), Gaps = 38/393 (9%)
Query: 195 TKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDGPPSPKKQKK 254
T K++ + ++ S + D ++K KKA S ++KP+ + P K + +
Sbjct: 119 TSKIEIQGLITTSRSKLDEAVSKYKKAPSSSSSSGSSTKPETPQP---ETPKPEVKPEPE 175
Query: 255 QVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQS 314
+ VKP +P EV ETP + ++ K V + + + P K
Sbjct: 176 TPKPEVKPEPEKPKPEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKPEPETPKPE 235
Query: 315 --SNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNP----PDPLIQPHP 368
P TP PE +P +T P P +P P P P P ++P P
Sbjct: 236 VKPEPETPKPEVKPELETPKPEVKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEP 295
Query: 369 SPSKHQNVWLPELLI---QTLPQPIHLYPS-QLMLLTLLPPITLNPL------------- 411
K + PEL + P+P P + L T P + P
Sbjct: 296 ETPKPEVK--PELETPKPEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKPEPETP 353
Query: 412 ENSWRSEKEKVSTLEEYYLTCPSPRRYPG---PRPERLVDPD------EPILANPLHEAD 462
+ + E E + L P P P P+PE +P+ +P L P E
Sbjct: 354 KPEVKPEPETPKPEVKPELETPKPEVKPELETPKPEVKPEPETPKPEVKPELETPKPEVK 413
Query: 463 PLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGS 522
P + +P + +P P+PE + P P E S+P +
Sbjct: 414 PELETPKPEV-KPEPETPKPEVKPEPETPKPEVKPEPETPKPEVKPDNSKPQADDKKPST 472
Query: 523 PQGASEAHSSNHPASPETNLSIIPYTHLRPTSL 555
P S+ S++ AS N P T+ SL
Sbjct: 473 PNNLSKDKQSSNQASTNENKKQGPATNKPKKSL 505
Score = 40.0 bits (92), Expect = 0.28
Identities = 52/208 (25%), Positives = 74/208 (35%), Gaps = 29/208 (13%)
Query: 186 PAPEFDP-PLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDND- 243
P PE P P T K + K LE E L K + ET KP+ + +
Sbjct: 232 PKPEVKPEPETPKPEVKPELETPKPEVKPELETPKP---EVKPEPETPKPEVKPELETPK 288
Query: 244 -DGPPSPKKQKKQVRIV-------VKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVAS 295
+ P P+ K +V+ VKP P EV +ETP + ++ K V
Sbjct: 289 PEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKP 348
Query: 296 DDDLNLFDALPISALLKQSSNP--LTPIPESQPAAQTTSP-----PHSP----RSSFFQP 344
+ + + P K P TP PE +P +T P P +P + P
Sbjct: 349 EPETPKPEVKPEPETPKPEVKPELETPKPEVKPELETPKPEVKPEPETPKPEVKPELETP 408
Query: 345 SPNEAPLWNNFRTNPPDPLIQPHPSPSK 372
P P P P ++P P K
Sbjct: 409 KPEVKP-----ELETPKPEVKPEPETPK 431
Score = 37.7 bits (86), Expect = 1.4
Identities = 49/192 (25%), Positives = 68/192 (34%), Gaps = 17/192 (8%)
Query: 186 PAPEFDP-PLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDD 244
P PE P P T K + K LE E K + + ET KP+ + +
Sbjct: 287 PKPEVKPEPETPKPEVKPELETPKPEVKPEPETPKPEVKPEL---ETPKPEVKPEPETPK 343
Query: 245 GPPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDA 304
P K + + + VKP P EV +ETP + ++ K V + + +
Sbjct: 344 --PEVKPEPETPKPEVKPEPETPKPEVKPELETPKPEVKPELETPKPEVKPEPETPKPEV 401
Query: 305 LPISALLKQSSNP--LTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDP 362
P K P TP PE +P +T P P P P P P P
Sbjct: 402 KPELETPKPEVKPELETPKPEVKPEPETPKPEVKPEPE--TPKPEVKP-------EPETP 452
Query: 363 LIQPHPSPSKHQ 374
+ P SK Q
Sbjct: 453 KPEVKPDNSKPQ 464
>dbj|BAB63322.1| KIAA0170 [Homo sapiens]
Length = 2090
Score = 58.9 bits (141), Expect = 6e-07
Identities = 105/448 (23%), Positives = 160/448 (35%), Gaps = 98/448 (21%)
Query: 168 LRSQGFEIDVDEFFRMLPPAP-EFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKR 226
L S+ FE +V+ P A E DP ++ K+ILE ++ + + GQ+
Sbjct: 910 LPSKAFEREVER-----PVANRECDPAELEEKVPKVILERDTQRGEPEGGSQDQKGQASS 964
Query: 227 KHDE-----------TSKP-DDGDDGDNDDGPPSPKKQKKQVRIVVKPTRVEPAAEVIRR 274
E TS P G P SP++ +K + K P AE R
Sbjct: 965 PTPEPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPRRHQKGSLLNCKM----PPAEKASR 1020
Query: 275 VETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQSSNPLTPIPESQPAAQTTSPP 334
+ +V+R +S + + + A P L QS L P P P + P
Sbjct: 1021 IRAAEKVSRGDQESPDACLPPT--VPEAPAPPQKPLNSQSQKHLAPPPLLSPLLPSIKPT 1078
Query: 335 -HSPRSSFFQPSPNEAPLWNNFRTNPPDPLI------------------QPHPSPSKHQ- 374
R Q +P EAPL + P P I +PHPS S Q
Sbjct: 1079 VRKTRQDGSQEAP-EAPLSSELEPFHPKPKIRTRKSSRMTPFPATSAAPEPHPSTSTAQP 1137
Query: 375 -----------------NVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRS 417
+V PE ++ T P+ L PS + P+T P R
Sbjct: 1138 VTPKPTSQATRSRTNRSSVKTPEPVVPTAPE---LQPS----TSTDQPVTSEPTSQVTRG 1190
Query: 418 EKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEAD--------------- 462
K + S + + P D P+ + P +A
Sbjct: 1191 RKSRSSVKTPETVVPTALELQPS------TSTDRPVTSEPTSQATRGRKNRSSVKTPEPV 1244
Query: 463 -PLAQQVQPAPHQQQPVQPEP--EPEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCD 519
P A ++QP+ QPV EP + + N SSV++P P+V T+ P L P T
Sbjct: 1245 VPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSVKTPEPVVPTA-PEL---RPSTSTDR 1300
Query: 520 IGSPQGASE-AHSSNHPASPETNLSIIP 546
+P+ S S + +S +T +++P
Sbjct: 1301 PVTPKPTSRTTRSRTNMSSVKTPETVVP 1328
Score = 54.3 bits (129), Expect = 1e-05
Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 57/272 (20%)
Query: 261 KPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQSSNPLTP 320
+P EP + R R RSS ++ ++ V + L P ++ + P+TP
Sbjct: 1382 QPVTPEPTSRATR-----GRKNRSSGKTPETLVPTAPKLE-----PSTS----TDQPVTP 1427
Query: 321 IPESQPAAQTTSPPHSPRSSFFQP------SPNEAPLWNNFRTNPPDPLIQPHPSPSKHQ 374
P SQ T+ RSS P +P P + + P+P Q +
Sbjct: 1428 EPTSQATRGRTN-----RSSVKTPETVVPTAPELQPSTSTDQPVTPEPTSQATRGRTDRS 1482
Query: 375 NVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPS 434
+V PE ++ T P+ L S + P+T +P + R K + S + +
Sbjct: 1483 SVKTPETVVPTAPE---LQASA----STDQPVTSDPTSRTTRGRKNRSSVKTPETVVPAA 1535
Query: 435 PRRYPGPRPERLVDPDEPILANPLHEAD----------------PLAQQVQPAPHQQQPV 478
P P D+P+ P A P+A ++QP+ + Q V
Sbjct: 1536 PELQPP------TSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIAPELQPSTSRNQLV 1589
Query: 479 QPEPEPEQSV--SNHSSVRSPNPLVATS-EPH 507
PEP + +N SSV++P P+V T+ EPH
Sbjct: 1590 TPEPTSRATRCRTNRSSVKTPEPVVPTAPEPH 1621
Score = 53.9 bits (128), Expect = 2e-05
Identities = 85/397 (21%), Positives = 150/397 (37%), Gaps = 58/397 (14%)
Query: 183 MLPPAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGD--DG 240
++P APE P + + + E +G+K +S K E P +
Sbjct: 1244 VVPTAPELQPSTSTD-------QPVTSEPTYQATRGRK-NRSSVKTPEPVVPTAPELRPS 1295
Query: 241 DNDDGPPSPKKQKKQVRI------VVKPTRVEPAAEVIR-RVETPARVT-RSSAQSSKSA 292
+ D P +PK + R V P V P A ++ T VT + ++++++S
Sbjct: 1296 TSTDRPVTPKPTSRTTRSRTNMSSVKTPETVVPTAPELQISTSTDQPVTPKPTSRTTRSR 1355
Query: 293 VASDDDLNLFDALPISALLKQSSN---PLTPIPESQPAAQTTSPPHSPRSSFFQPS-PNE 348
N +PI+ L S++ P+TP P S+ + P+ P
Sbjct: 1356 TNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRATRGRKNRSSGKTPETLVPTAPKL 1415
Query: 349 APLWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITL 408
P + + P+P Q + +V PE ++ T P+ L PS + P+T
Sbjct: 1416 EPSTSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTAPE---LQPST----STDQPVTP 1468
Query: 409 NPLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEAD------ 462
P + R ++ S + P P + D+P+ ++P
Sbjct: 1469 EPTSQATRGRTDRSS------VKTPETVVPTAPELQASASTDQPVTSDPTSRTTRGRKNR 1522
Query: 463 ----------PLAQQVQPAPHQQQPVQPEP--EPEQSVSNHSSVRSPNPLVATSEPHLGA 510
P A ++QP QPV PEP + +N SSV++P +V + P L
Sbjct: 1523 SSVKTPETVVPAAPELQPPTSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIA-PEL-- 1579
Query: 511 SEPHVQTCDIGSPQGASEA-HSSNHPASPETNLSIIP 546
+P + +P+ S A + +S +T ++P
Sbjct: 1580 -QPSTSRNQLVTPEPTSRATRCRTNRSSVKTPEPVVP 1615
Score = 50.1 bits (118), Expect = 3e-04
Identities = 80/366 (21%), Positives = 146/366 (39%), Gaps = 64/366 (17%)
Query: 183 MLPPAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETS-------KPD 235
++P APE P + + + E +S+ + +G+K+ +S K ET +P
Sbjct: 1162 VVPTAPELQP--STSTDQPVTSEPTSQ-----VTRGRKS-RSSVKTPETVVPTALELQPS 1213
Query: 236 DGDDGDNDDGPPSPKKQKKQVRIVVK------PT--RVEPAAEVIRRVETPARVTRSSAQ 287
D P S + ++ R VK PT ++P+ + V + + +
Sbjct: 1214 TSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTYQATRGR 1273
Query: 288 SSKSAVASDDDLNLFDALPISALLKQSSN---PLTPIPESQPAAQTTSPPHSPRSSFFQP 344
++S+V + + + +P + L+ S++ P+TP P S+ T+ P
Sbjct: 1274 KNRSSVKTPEPV-----VPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETVVP 1328
Query: 345 SPNEAPLWNNF-RTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLL 403
+ E + + + P P + S + +V PE + P+ L PS +
Sbjct: 1329 TAPELQISTSTDQPVTPKPTSRTTRSRTNMSSVKNPESTVPIAPE---LPPST----STE 1381
Query: 404 PPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEAD- 462
P+T P + R K + S L +P+ P D+P+ P +A
Sbjct: 1382 QPVTPEPTSRATRGRKNRSSGKTPETLVPTAPKLEPS------TSTDQPVTPEPTSQATR 1435
Query: 463 ---------------PLAQQVQPAPHQQQPVQPEP--EPEQSVSNHSSVRSPNPLVATSE 505
P A ++QP+ QPV PEP + + ++ SSV++P +V T+
Sbjct: 1436 GRTNRSSVKTPETVVPTAPELQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTA- 1494
Query: 506 PHLGAS 511
P L AS
Sbjct: 1495 PELQAS 1500
>emb|CAG78072.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50555714|ref|XP_505265.1| hypothetical protein
[Yarrowia lipolytica]
Length = 814
Score = 58.5 bits (140), Expect = 8e-07
Identities = 55/184 (29%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 319 TPIPESQPAAQTTSPPHSPRSSFFQPSPN-EAPLWNNFRTNPPDPLIQPHPSPSKHQNVW 377
TP P+ +P T P SP +P P E P+ T+ P+++P P+P K +
Sbjct: 633 TPKPQPKPTTLVTKPQPSPEKPVVKPEPTPEKPIVKPEPTS-EKPIVKPEPTPEK--PIV 689
Query: 378 LPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRR 437
PE +TL +P P T P+T P E + + + T E P P
Sbjct: 690 KPEPTPETLSKPEE--PVVKPEPTPEVPVTPGP-EPETPAPRPEEPTPEAPVTPGPEPET 746
Query: 438 YPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRSP 497
P PRPE P+ P+ P E P + +P P + PV P PEPE +N ++
Sbjct: 747 -PAPRPEE-PTPEVPVTPGPEPET-PAPRPEEPTP--ESPVTPGPEPETPQANSATKMKV 801
Query: 498 NPLV 501
LV
Sbjct: 802 GALV 805
>gb|EAL17991.1| hypothetical protein CNBK3420 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1114
Score = 58.5 bits (140), Expect = 8e-07
Identities = 103/466 (22%), Positives = 178/466 (38%), Gaps = 41/466 (8%)
Query: 233 KPDDGDDGDNDDGPPSPKKQKKQVRIVVKP-----TRVEPAAEVIRRVETPARVTRSSAQ 287
+P D D + P P + ++P T + P +R +P+ ++ AQ
Sbjct: 497 RPSDPSDPSDPSDPSGPTDELNSSPTCLEPGPGLATPLPPRGSSLRPQHSPSPLSSPGAQ 556
Query: 288 SSKSAVASDDDLNLFDALPISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQP-SP 346
+S A + A P++ + P P+P P++ ++ H S+ + +P
Sbjct: 557 EGQSIRAGNT------AFPLAGV--PLLGPEAPLPHLPPSSPSSHSHHGLDSNLERVGTP 608
Query: 347 NEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPI 406
P + P P QP ++HQ P L P H +PS TL PP+
Sbjct: 609 YYTPSLMH-----PSPSFQPQEEGTQHQPHTYPSRLHPHTQIPSHSHPS-ATATTLQPPL 662
Query: 407 TLN-PLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPER-LVDPDEPILANPLHEADPL 464
+ + L S +T + T + Y +R ++ +E + E D
Sbjct: 663 SRSTSLSPSVPLPATLATTTLDPVYTADTQGAYANAEEDREEIEAEEGKQRDRDRERDKE 722
Query: 465 AQQVQPAPHQQQPVQPEPEPEQSVSNHSSV---RSPNPLVATSEPHLGASEPHVQTCDIG 521
+ V A + + ++ E +P Q V N + + E AS P +
Sbjct: 723 RESVLLA-YDRPEIEGESDPRQ-VGNTTEIMEGMEKGFFPRQGEQVSDASAPSPVSLRAP 780
Query: 522 SPQGASEAHSSNHPAS--PETNLSIIPYTHLRPTSLSE-CINIFHQEASLMLCNVQGQTD 578
+P E S +HP++ P + L H L+E +E + + + +
Sbjct: 781 APASVGEYDSPSHPSALQPPSPLHPAAPIHATAPHLAEGQAEEMEKETPVETEEAKAEVE 840
Query: 579 LSENADYVDEEWHSLSTWLVAQVPVIMQLLHAEGSQRIEAAKQRFARRVALHEQEQRQKL 638
E + +E+ L +V Q+ + ++ + AR EQE+ +
Sbjct: 841 GDEQTEKEEEQRQRLEREREREVLEAQQIAQWQAAETARWEAEESARL----EQEEAAR- 895
Query: 639 LEAIEEARRKQEQAEEAARLAAAQDEQARLEAE---RLEAEAEARR 681
L A E+ARR AEEA R ++E+ R E E + EAE EARR
Sbjct: 896 LAAEEQARR---DAEEAERFRLEEEERMRAEEEVRRQKEAEEEARR 938
>emb|CAE60715.1| Hypothetical protein CBG04386 [Caenorhabditis briggsae]
Length = 594
Score = 58.5 bits (140), Expect = 8e-07
Identities = 61/248 (24%), Positives = 95/248 (37%), Gaps = 28/248 (11%)
Query: 313 QSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSK 372
Q NP P E +P+A+ + P QPS P ++ P+P +P P PS+
Sbjct: 137 QPPNPPEPSDEPEPSAEPSEQPSDAPQPSVQPSDEPQP------SDQPEPSAEPSPEPSE 190
Query: 373 HQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVST-----LEE 427
Q P+P+ PS+ + P ++ P + S++ + S E
Sbjct: 191 -----------QPSPRPVE--PSEEPEPSDKPEPSVEPSADPQPSDEPQPSAGPSDEPEP 237
Query: 428 YYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPEQS 487
PS P +PE +P E P A P + + QP+ + V+P +P+ S
Sbjct: 238 SAKPQPSEEPEPSDKPEPSAEPSEQPSDAPQPSAKP-SDEPQPSDQPEPSVEPSKDPQPS 296
Query: 488 VSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGS--PQGASEAHSSNHPASPETNLSII 545
S P+ SE ++EP Q D S P G SE + P S
Sbjct: 297 DEPQPSA-EPSDEPQPSEQPEPSAEPSEQPSDASSPGPVGPSEEPEPSDKPEPSVEPSED 355
Query: 546 PYTHLRPT 553
P+ P+
Sbjct: 356 PHPSAEPS 363
Score = 57.8 bits (138), Expect = 1e-06
Identities = 78/299 (26%), Positives = 112/299 (37%), Gaps = 39/299 (13%)
Query: 248 SPKKQKKQVRIVVKPTR----VEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFD 303
+P+ K + PT+ V AA +I + P+ SS V S+ +
Sbjct: 37 APRPTKGTTTTLAPPTQAPIIVSSAAPIIV-TDAPSSAAPEVPSSSTPEVPSEAPSS--- 92
Query: 304 ALPISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFR-TNPPDP 362
P +K +S P P E QP+A+ + P P S P+ P+ + NPP+P
Sbjct: 93 --PTEEPIKSTSGPFQPSEEPQPSAEPSDKP-DPSS-----PPSPGPMTKGPQPPNPPEP 144
Query: 363 LIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPL-ENSWRSEKEK 421
+P PS P PQP + PS + P + P E S +
Sbjct: 145 SDEPEPSAE-------PSEQPSDAPQP-SVQPSDEPQPSDQPEPSAEPSPEPSEQPSPRP 196
Query: 422 VSTLEEYYLTCPSPRRYPGPRPERLVDP---DEP-ILANPLHEADPLAQQVQPAPHQQQP 477
V EE P P P P E DP DEP A P E +P A +P P ++
Sbjct: 197 VEPSEE-----PEPSDKPEPSVEPSADPQPSDEPQPSAGPSDEPEPSA---KPQPSEEPE 248
Query: 478 VQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPA 536
+PEP S S +P P S+ + +P PQ + E S P+
Sbjct: 249 PSDKPEPSAEPSEQPS-DAPQPSAKPSDEPQPSDQPEPSVEPSKDPQPSDEPQPSAEPS 306
Score = 52.0 bits (123), Expect = 7e-05
Identities = 74/356 (20%), Positives = 121/356 (33%), Gaps = 45/356 (12%)
Query: 186 PAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDG 245
P P P + K + E SD P + + Q ++KP D
Sbjct: 225 PQPSAGPSDEPEPSAKPQPSEEPEPSDKPEPSAEPSEQPSDAPQPSAKPSD--------- 275
Query: 246 PPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDAL 305
P P Q + V+P++ ++ + P+ + S Q SA S+ +
Sbjct: 276 EPQPSDQPEPS---VEPSKDPQPSDEPQPSAEPSDEPQPSEQPEPSAEPSEQPSDASSPG 332
Query: 306 PISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQ 365
P+ S P + +P+ + + PH P P+ P ++ P+P ++
Sbjct: 333 PVGP-----SEEPEPSDKPEPSVEPSEDPHPSAEPSEAPQPSAEPSDEPQPSSGPEPSVE 387
Query: 366 PHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTL 425
P P PQP PS + P + P E+ S
Sbjct: 388 PSKDPQP-----------SDAPQP-SAEPSDEPQPSEQPEPSAEP--------SEQPSDA 427
Query: 426 EEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPE 485
PS P +PE V+P E +P A+P ++ QP+ QP PE
Sbjct: 428 SSPGPVGPSEEPEPSDKPEPSVEPSE----DPHPSAEP-SEAPQPSAEPSDEPQPSSGPE 482
Query: 486 QSVSNHSSVR---SPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASP 538
SV + +P P S+ ++EP PQ + + S P+ P
Sbjct: 483 PSVEPSKDPQPSDAPQPSAEPSDEPEPSAEPSEAPQPSDKPQPSDKPQPSGPPSPP 538
Score = 39.7 bits (91), Expect = 0.36
Identities = 70/317 (22%), Positives = 113/317 (35%), Gaps = 48/317 (15%)
Query: 186 PAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDG 245
P P +P +K Q + S+E SD P + ++ + G G +++
Sbjct: 283 PEPSVEP--SKDPQPSDEPQPSAEPSDEPQPSEQPEPSAEPSEQPSDASSPGPVGPSEEP 340
Query: 246 PPSPKKQKKQVRIVVKPTR-VEPAAEVIRRVETPARVTRSSAQSS--KSAVASDDDLNLF 302
PS K + V+P+ P+AE + A + SS + +V D
Sbjct: 341 EPSDKPEPS-----VEPSEDPHPSAEPSEAPQPSAEPSDEPQPSSGPEPSVEPSKDPQPS 395
Query: 303 DALPISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDP 362
DA SA + S+ P + +P+A+ + P S SS P+E P ++ P+P
Sbjct: 396 DAPQPSA---EPSDEPQPSEQPEPSAEPSEQP-SDASSPGPVGPSEEPE----PSDKPEP 447
Query: 363 LIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKV 422
++P P P PQP PS + P ++ P ++ S+
Sbjct: 448 SVEPSEDPH-------PSAEPSEAPQP-SAEPSDEPQPSSGPEPSVEPSKDPQPSD---- 495
Query: 423 STLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEP 482
P P P PE +P E A + + QP+ Q P P
Sbjct: 496 ---------APQPSAEPSDEPEPSAEPSE---------APQPSDKPQPSDKPQPSGPPSP 537
Query: 483 EPEQSVSNHSSVRSPNP 499
P + R P P
Sbjct: 538 PPRPTRRPGPPTRRPPP 554
>gb|AAA98970.1| atrophin-1 related protein [Rattus norvegicus]
gi|11360394|pir||T42731 atrophin-1 related protein - rat
Length = 1006
Score = 58.2 bits (139), Expect = 1e-06
Identities = 96/393 (24%), Positives = 143/393 (35%), Gaps = 66/393 (16%)
Query: 313 QSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSK 372
Q PL P P + T P S + Q P E PL PP PL PH P
Sbjct: 318 QGQGPLGPSPAAAHPHSTIQLPASQSALQPQQPPREQPL-------PPAPLAMPHIKPP- 369
Query: 373 HQNVWLPELLIQTLPQP-IHLYPSQL-------MLLTLLPPITLNPLENSWRSEKEKVST 424
P I LP P H +P L M L PP L PL S+
Sbjct: 370 ------PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPL-----------SS 412
Query: 425 LEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQP--EP 482
L ++ PS P P +L+ +P+ ++P Q P P P
Sbjct: 413 LSTHHP--PSAH----PPPLQLMPQSQPLPSSPAQPPGLTQSQSLPPPAASHPTTGGLHQ 466
Query: 483 EPEQS-VSNHSSVRSPNPLVA------TSEPHLGASEPHVQTCDIGSPQGASEAHSSNHP 535
P QS H V P + TS P G S C A+ + N P
Sbjct: 467 VPSQSPFPQHPFVPGGPPPITPPSCPPTSTPPAGPSSSSQPPCS------AAVSSGGNVP 520
Query: 536 ASPETNLSIIPYTHLRPTSLSECINIFH-----QEASLMLCNVQGQTDLSENADY---VD 587
+P L P ++ +L E + S V + S++A + +D
Sbjct: 521 GAPSCPL---PAVQIKEEALDEAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLD 577
Query: 588 EEWHSLSTWLVAQVPVIMQLLHAEGSQRIEAAKQRFARRVALHEQEQRQKLLEAIEEARR 647
++S + + +P+ L + + IE AK R A + A E+E+ ++ + E R
Sbjct: 578 RGYNSCARTDLYFMPLAGSKLAKKREEAIEKAK-REAEQKAREEREREKEKEKERERERE 636
Query: 648 KQEQAEEAARLAAAQDEQARLEAERLEAEAEAR 680
++ +AE AA+ A++ + RL +L R
Sbjct: 637 REREAERAAQKASSSAHEGRLSDPQLSGPGHMR 669
Score = 50.4 bits (119), Expect = 2e-04
Identities = 93/396 (23%), Positives = 136/396 (33%), Gaps = 79/396 (19%)
Query: 192 PPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGD---------N 242
P K QR+ + D+ E++D +A K K E S+P+ +G+ N
Sbjct: 89 PLKNTKRQREKVASDT-EDTD-------RATSKKTKTQEISRPNSPSEGEGESSDSRSVN 140
Query: 243 DDGPPSPKKQKKQVRIVVKPTRVEP----------AAEVIRRVETPARVTRSSAQSSKS- 291
D+G PK + R P+ P A + + + + PA S A S+ S
Sbjct: 141 DEGSSDPKDIDQDNRST-SPSIPSPQDNESDSDSSAQQQMLQTQPPALQAPSGAASAPST 199
Query: 292 AVASDDDLNLFDALPISALLKQSSNPLTPIPESQ------PAAQT----TSPPHSPRSSF 341
A L P + + +P T P +Q PAA T T H PR
Sbjct: 200 APPGTTQLPTPGPTPSATTVPPQGSPATSQPPNQTQSTVAPAAHTLIQQTPTLHPPRL-- 257
Query: 342 FQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLT 401
PSP+ P P QPHP PS H +QT P H P Q LT
Sbjct: 258 --PSPH--PPLQPMTAPPSQNSAQPHPQPSLHGQGPPGPHSLQTGPLLQHPGPPQPFGLT 313
Query: 402 LLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEA 461
PL S + ST++ P + + P +P PL A
Sbjct: 314 PQSSQGQGPLGPS-PAAAHPHSTIQL-------------PASQSALQPQQPPREQPLPPA 359
Query: 462 DPLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIG 521
++P P P P P+ + PHL P ++
Sbjct: 360 PLAMPHIKPPPTTPIPQLPAPQAHK-----------------HPPHLSGPSPFSMNANLP 402
Query: 522 SPQGAS--EAHSSNHPASPE-TNLSIIPYTHLRPTS 554
P + S++HP S L ++P + P+S
Sbjct: 403 PPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSS 438
>emb|CAF90901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1594
Score = 58.2 bits (139), Expect = 1e-06
Identities = 98/433 (22%), Positives = 156/433 (35%), Gaps = 63/433 (14%)
Query: 299 LNLFDALPISALLKQSSNPLTPIPESQPAAQ------------TTSPPHSPRSSFFQPSP 346
L A P ALL+ P+ E QP +Q + PP PSP
Sbjct: 1144 LGTLSAQPPQALLEDDEEPMPNSSEIQPFSQVHTLLQSLQPRPSVQPPQLQPLHMHAPSP 1203
Query: 347 NEAP------LWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLIQTL-PQPIHLYPSQLML 399
+ P + T P P Q H S H NV T+ PQ + ++L
Sbjct: 1204 AQVPSQLLSSVHMQAVTMPTPPPAQRHSSD--HSNVRQSFPHSHTMAPQQQQQHQKSMVL 1261
Query: 400 LTLLPPITLNPLENSWRSEKEKVST--LEEYYLTCPSPRRYPGPRPERLVDPDEPILANP 457
T PP+ P S RS+ E V T L E PSP P + P +P
Sbjct: 1262 QTKAPPMQQPP---SPRSKPEAVPTGCLRE----SPSPLLMPSTHMPQFHAMGHP---SP 1311
Query: 458 LHEADPLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASE-PHVQ 516
H H+Q+ + E+ +HS V P+P P L E H++
Sbjct: 1312 SHNKK----------HEQRSGVVGVKEEKP--SHSPVLPPSPFSPALRPDLHKPENKHLK 1359
Query: 517 TCDIGSPQGASEAHSSNHPASPETNLSIIPYTHLRPTSLSECINIFHQEASLMLCNVQGQ 576
T + P+ P ++ + P T + P C E S
Sbjct: 1360 TLE--GPRPGPRLSDLAAPPQQDSKIKQEPKTPIAPKKTQVCTGARRDEDS-------SS 1410
Query: 577 TDLSENADYV-DEEWHSLSTWLVAQVPVIMQLLHAEGSQRIEAAKQRFAR-RVALHEQEQ 634
LS ++ D + ++ +W + Q + + + ++ F + R A E+E+
Sbjct: 1411 ATLSSLCLFLQDVKLKNMGSWAS-----LAQRSQSTPASSVRSSSDSFEQFRRAAREKEE 1465
Query: 635 RQKLLEAIEE-ARRKQEQAEEAARLAAAQDEQARLEAERLEAEAEARRLAPVVFTPVASA 693
R++ L+A + AR++QE+ + D+ + R + +A R+ P A
Sbjct: 1466 RERQLKAQNQLARKEQEKLRIRLAFFSRDDDDTMEQTRRTQEDARRRQEQQSPLAPTPPA 1525
Query: 694 STPANQAAQNVPS 706
STP + Q P+
Sbjct: 1526 STPPTHSPQAPPT 1538
>gb|EAL89430.1| hypothetical protein Afu4g13630 [Aspergillus fumigatus Af293]
Length = 1187
Score = 57.8 bits (138), Expect = 1e-06
Identities = 108/525 (20%), Positives = 188/525 (35%), Gaps = 73/525 (13%)
Query: 186 PAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDG 245
PAPE P + +E+ + + + P+ K A QS + +P ++ +
Sbjct: 503 PAPEEPPAAEESAPAVPEVEEPAPQDETPVQKAPAAEQSTAEDVTPEEPAPVEEASAKEP 562
Query: 246 ---PPSPKKQKKQVRIVV----KPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDD 298
P+P + V P A+E VE A S+A+ S A + +
Sbjct: 563 VAEEPTPGDKSSPVEEAAVEEAPPAEESAASEESTPVEEAAPTEESAAEESAPAEEATES 622
Query: 299 LNLFDALPISAL--LKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFR 356
+++ + A L++ S P P A+ +P +P+ E+P
Sbjct: 623 ISVGEPAAADAEEGLREESAHEEPAPVEDAPAEEPAPVE-------EPAAEESP------ 669
Query: 357 TNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWR 416
+ DP P+P++ E+ + P P P++ P P+E S
Sbjct: 670 -SVEDPAPVEEPAPAEDPAAAAEEIPTEE-PAPAEEVPAEEPAPVQEPAEEPTPVEKSVP 727
Query: 417 SEKEKVSTLEEYYLTCPSPRRYPGPR-PERLVDPDEPILANPLHEADP-LAQQVQPAPHQ 474
E + P+ R P P P EP P+ E ++ V+PAP
Sbjct: 728 EE------------SAPAEERIPVEEAPAEESTPAEPA---PVEEVPAEISAPVEPAP-V 771
Query: 475 QQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEPH-VQTCDIGSPQGASEAHSSN 533
++P E P +S + P ++ + EP V+ + P A+E +
Sbjct: 772 EEPAAEEASPTESAREEPAPMEEAPTEESASVEPASVEPAPVEPGPVEEPAAAAEEIPAE 831
Query: 534 HPASPETNLSI---IPYTHLRPTSLSECINIFHQEASLMLCNVQGQTDLSENADYVDEEW 590
PA E + +P P F +E + ++S + D ++
Sbjct: 832 EPAVVEEGAPVEESVPVKEAAPVDAE-----FSEETP----DPTPVEEISRDIDALEP-- 880
Query: 591 HSLSTWLVAQVPVIMQLLHA---------EGSQRIEAAKQRFARRVALHEQEQRQKLL-- 639
L L A VPV + HA EG +R + RR ++ +R L
Sbjct: 881 --LEAALPAVVPVAIAAEHARRRKRRSPDEGQRRHSKSSSEEVRRSLPRKKPERSGSLLD 938
Query: 640 ---EAIEEARRKQEQAEEAARLAAAQDEQARLEAERLEAEAEARR 681
+A+EEA+R+ E+ L + + +AER +E R
Sbjct: 939 RWNKALEEAKRQHEEKLRQEELRSKDKFRTPEKAERDRHSSERER 983
Score = 52.0 bits (123), Expect = 7e-05
Identities = 114/521 (21%), Positives = 177/521 (33%), Gaps = 56/521 (10%)
Query: 205 EDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDGPPSPKKQKKQVRIVVK--P 262
E + + D P N+ + +K + + PD G + D PP ++ +V++ + P
Sbjct: 277 EAAPAQGDPPTNESAEEDVTKPDTENSPAPD-GPAEEQSDSPPEAEQPVAEVQVPTEEQP 335
Query: 263 TRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQSSNPLTPIP 322
+PA E E PA T ++ ++ + + D ++S++ P
Sbjct: 336 APKKPAPEPSS--EEPAAPTETAENNTSEEAVAPEGATA-DIAADETTKEESTDEKAP-- 390
Query: 323 ESQPAA----------QTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSK 372
+PAA + T + P+ +EA D +P P S
Sbjct: 391 -EEPAAAESPVEDKQDEATKALAAEEGGTKTPAADEAVA--------EDAAAEPAPEASS 441
Query: 373 HQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTC 432
V PE P++ P E E + S E
Sbjct: 442 TDEVAQPEAT-----------PAEAPTEEKKEDAPQEPPEQPLTEEVVEESASPESVAEE 490
Query: 433 PSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQ-PAPHQQQPVQPEPEPEQSVSNH 491
P+ P P E P+EP A E+ P +V+ PAP + PVQ P EQS +
Sbjct: 491 PASAEQPPPADEPA--PEEPPAAE---ESAPAVPEVEEPAPQDETPVQKAPAAEQSTAED 545
Query: 492 SSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPETNLS--IIPYTH 549
+ P P+ S A EP D SP EA P + E+ S P
Sbjct: 546 VTPEEPAPVEEASAKEPVAEEP--TPGDKSSP--VEEAAVEEAPPAEESAASEESTPVEE 601
Query: 550 LRPTSLSECINIFHQEASLMLCNVQGQTDLSENADYVDEEWHSLSTWL---VAQVPVIMQ 606
PT S E + +V +E H + A+ P ++
Sbjct: 602 AAPTEESAAEESAPAEEATESISVGEPAAADAEEGLREESAHEEPAPVEDAPAEEPAPVE 661
Query: 607 LLHAEGSQRIEAAKQRFARRVALHEQEQRQKLLEAIEEARRKQEQAEEAARLAAAQDEQA 666
AE S +E + + + E A ++ AEE A + +E
Sbjct: 662 EPAAEESPSVEDPAP-VEEPAPAEDPAAAAEEIPTEEPAPAEEVPAEEPAPVQEPAEEPT 720
Query: 667 RLEAERLEAEAEARRLAPVVFTPVASASTPANQA-AQNVPS 706
+E E A A PV P A STPA A + VP+
Sbjct: 721 PVEKSVPEESAPAEERIPVEEAP-AEESTPAEPAPVEEVPA 760
>gb|AAM13864.1| unknown protein [Arabidopsis thaliana]
Length = 712
Score = 57.8 bits (138), Expect = 1e-06
Identities = 70/297 (23%), Positives = 107/297 (35%), Gaps = 41/297 (13%)
Query: 237 GDDGDNDDGPPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASD 296
G G N P+P + + + + P +E ++ P + S K S
Sbjct: 401 GGGGSNPSPKPTPTPKAPEPKKEINPPNLEEPSK-----PKPEESPKPQQPSPKPETPSH 455
Query: 297 DDLNLFDALPISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPN-EAPLWNNF 355
+ N + P S KQ S P T P+ +P + P QP P E+P +
Sbjct: 456 EPSNPKEPKPESP--KQES-PKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESS 512
Query: 356 RTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPL-ENS 414
+ PP P P P P K + P+ Q P+P Q PP P E S
Sbjct: 513 KQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQ-------PPKQETPKPEES 565
Query: 415 WRSEKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDE--------PILANPL----HEAD 462
+ + K T P P P P+P + P + P L +P+ ++A
Sbjct: 566 PKPQPPKQET--------PKPEESPKPQPPKQEQPPKTEAPKMGSPPLESPVPNDPYDAS 617
Query: 463 PL----AQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEPHV 515
P+ Q P+ + + P+ P S V SP P V + P + + P V
Sbjct: 618 PIKKCRPQPPSPSTEETKTTSPQSPPVHSPPPPPPVHSPPPPVFSPPPPMHSPPPPV 674
Score = 50.1 bits (118), Expect = 3e-04
Identities = 73/340 (21%), Positives = 116/340 (33%), Gaps = 42/340 (12%)
Query: 186 PAPEFDPPLTKKVQRKMILEDSSEESDVPLNKGKKAGQSKRKHDETSKPDDGDDGDNDDG 245
P+P+ P +K I + EE P K +++ + ++ + P +
Sbjct: 407 PSPKPTPTPKAPEPKKEINPPNLEEPSKP--KPEESPKPQQPSPKPETPSHEPSNPKEPK 464
Query: 246 PPSPKKQKKQVRIVVKPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDAL 305
P SPK++ + KP P E ++ + +S K
Sbjct: 465 PESPKQESPKTE-QPKPKPESPKQESPKQEAPKPEQPKPKPESPK--------------- 508
Query: 306 PISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQ---PSPNEAPLWNNFRTNPPDP 362
++SS P PE P + P SP+ + P P E+P + P P
Sbjct: 509 ------QESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKP 562
Query: 363 LIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLML-LTLLPPITLNPLENSWRSEKEK 421
P P P K + P+ PQP P Q T P + PLE+ ++
Sbjct: 563 EESPKPQPPKQET---PKPEESPKPQP----PKQEQPPKTEAPKMGSPPLESPVPNDPYD 615
Query: 422 VSTLEEYYLTCPSPR----RYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQP 477
S +++ PSP + P+ + P P P+H P P H P
Sbjct: 616 ASPIKKCRPQPPSPSTEETKTTSPQSPPVHSPPPP---PPVHSPPPPVFSPPPPMHSPPP 672
Query: 478 VQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQT 517
P P V SP P V + P + + P V +
Sbjct: 673 PVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHS 712
>gb|EAA58668.1| hypothetical protein AN6284.2 [Aspergillus nidulans FGSC A4]
gi|67540228|ref|XP_663888.1| hypothetical protein
AN6284_2 [Aspergillus nidulans FGSC A4]
gi|49097922|ref|XP_410421.1| hypothetical protein
AN6284.2 [Aspergillus nidulans FGSC A4]
Length = 926
Score = 57.8 bits (138), Expect = 1e-06
Identities = 71/300 (23%), Positives = 105/300 (34%), Gaps = 39/300 (13%)
Query: 261 KPTRVEPAAEVIRRVETPARVTRSSAQSSKSAVASDDDLNLFDALPISALLKQSSNPLTP 320
KP PA + P + + ++ S D D+N LP + Q +P
Sbjct: 160 KPAEPAPAPTHTKHEPAPEPMDLDTTETPVSQPKPDKDVNCAPILPSTGAEAQQLLAASP 219
Query: 321 IPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTN-PPDPLIQPH--------PSPS 371
+ PA T P S QP + N +T P P QP P P+
Sbjct: 220 HKDQPPAHVTPQSPLPETKSPAQPLGQQPAAQKNLQTQAQPQPQSQPQAPPQVTPPPQPT 279
Query: 372 KHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRS--------EKEKVS 423
H +L T PQ H P PPI +++S ++ ++ S
Sbjct: 280 SH------AILHPTPPQQPHHTPQ-----PQAPPIHPQQVQSSAQNVQRQPQPPHEKGAS 328
Query: 424 TLEEYYLTCPSPRRYPGPR---PERLVDPDE-PILANPLHEADPLAQQVQPAPHQQQPVQ 479
++ +T PS P P + V+P P P DP + P P +QP
Sbjct: 329 PPQQSLVTAPSVPALGEPANVPPTQPVEPSSIPTAVTPTPAHDP---AITPLPPSRQPQP 385
Query: 480 PEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASPE 539
P P +N+ V SP P S + G PQG+ + S N P +P+
Sbjct: 386 PHPPQ----TNNVPVASPTPQKTPSTVEAAGKKVVPVPPPRGPPQGSLQQWSLNQPQTPQ 441
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.130 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,336,324,835
Number of Sequences: 2540612
Number of extensions: 63997655
Number of successful extensions: 394094
Number of sequences better than 10.0: 4668
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 4569
Number of HSP's that attempted gapping in prelim test: 352091
Number of HSP's gapped (non-prelim): 24873
length of query: 747
length of database: 863,360,394
effective HSP length: 136
effective length of query: 611
effective length of database: 517,837,162
effective search space: 316398505982
effective search space used: 316398505982
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 79 (35.0 bits)
Lotus: description of TM0234.16