BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0233.7
(482 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_466650.1| putative far-red impaired response protein [Ory... 230 7e-59
emb|CAE05500.2| OSJNBa0022H21.20 [Oryza sativa (japonica cultiva... 215 2e-54
ref|XP_470381.1| putative far-red impaired response protein [Ory... 206 1e-51
ref|XP_466647.1| putative far-red impaired response protein [Ory... 191 4e-47
ref|XP_478214.1| putative far-red impaired response protein [Ory... 189 1e-46
emb|CAB80483.1| hypothetical protein [Arabidopsis thaliana] gi|4... 182 2e-44
gb|AAD51282.1| far-red impaired response protein [Arabidopsis th... 181 6e-44
ref|NP_567455.1| far-red impaired response protein (FAR1) / far-... 181 6e-44
gb|AAM91710.1| unknown protein [Arabidopsis thaliana] gi|1942405... 178 3e-43
gb|AAX92857.1| transposon protein, putative, unclassified [Oryza... 177 7e-43
emb|CAE02218.2| OSJNBb0002N06.8 [Oryza sativa (japonica cultivar... 177 9e-43
ref|NP_908529.1| P0702D12.15 [Oryza sativa (japonica cultivar-gr... 177 9e-43
dbj|BAD81770.1| putative far-red impaired response protein [Oryz... 171 4e-41
ref|NP_178118.1| far-red impaired responsive protein, putative [... 170 8e-41
emb|CAB78999.1| putative protein [Arabidopsis thaliana] gi|28276... 169 2e-40
gb|AAQ62876.1| At1g76320 [Arabidopsis thaliana] gi|62320160|dbj|... 168 3e-40
ref|NP_177759.1| far-red impaired responsive protein, putative [... 168 3e-40
pir||G96790 hypothetical protein F15M4.18 [imported] - Arabidops... 168 3e-40
gb|AAF66982.1| transposase [Zea mays] 167 5e-40
ref|XP_475123.1| putative Mutator-like transposase [Oryza sativa... 166 2e-39
>ref|XP_466650.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)] gi|47497945|dbj|BAD20150.1| putative
far-red impaired response protein [Oryza sativa
(japonica cultivar-group)] gi|47496830|dbj|BAD19590.1|
putative far-red impaired response protein [Oryza sativa
(japonica cultivar-group)]
Length = 817
Score = 230 bits (587), Expect = 7e-59
Identities = 106/208 (50%), Positives = 143/208 (67%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFWVDARSR+ Y+ + DVV+ D++Y+ + +M + F+GVNHHGQS+L GCGLLS + E
Sbjct: 239 VFWVDARSRSMYEFYNDVVTLDTSYVVGKYDMPLATFIGVNHHGQSVLLGCGLLSDETAE 298
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
TY WLFK+ + CM G PKAIIT CR IQ+AV EV HHR C +HIM+K E+L GL
Sbjct: 299 TYSWLFKAWIACMYGNLPKAIITGHCRGIQSAVAEVIPGVHHRICLFHIMRKATERLGGL 358
Query: 321 TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKSI 380
++Y I K + VYDS+ EF+ + +I LQ N+WL S++ R WVP+++K
Sbjct: 359 SEYAAISKAFQKAVYDSLTIDEFEGNWNALITYNGLQGNDWLRSIYECRYSWVPVFLKDT 418
Query: 381 FWAGMSTTQRSESMNAFFDGYVNSKNLI 408
FWAGMS TQR+E++ FFDGYV+ K +
Sbjct: 419 FWAGMSATQRNENIIPFFDGYVDLKTTL 446
>emb|CAE05500.2| OSJNBa0022H21.20 [Oryza sativa (japonica cultivar-group)]
gi|50925121|ref|XP_472870.1| OSJNBa0022H21.20 [Oryza
sativa (japonica cultivar-group)]
Length = 803
Score = 215 bits (548), Expect = 2e-54
Identities = 113/275 (41%), Positives = 161/275 (58%), Gaps = 9/275 (3%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
V WVDARSRAAY F DVV FD+ YLT + + F+G+NHHGQ +L GCGLL + E
Sbjct: 247 VCWVDARSRAAYQHFCDVVCFDTVYLTYQFVIPLVAFLGINHHGQFVLLGCGLLGDESPE 306
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
T+ WLFK L+CM ++P+AIIT R + AV EVF + HR+ WHIMK++PE +
Sbjct: 307 TFSWLFKKWLKCMNDKSPEAIITTHSRPVVKAVAEVFPNTRHRYNLWHIMKELPEMSGRV 366
Query: 321 TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKSI 380
+ I +K +V+D+I +++F+ +M+ Y L +N WL++LF +R +WVP YVK
Sbjct: 367 EDKEAISLRMKKVVFDTITSTDFEREWVEMVNQYNLHDNHWLTTLFEERAKWVPAYVKDT 426
Query: 381 FWAGMSTTQRSESMNAFFDGYVNSKNLIGTICSAI**GTEK*DGKGE*G*FFTLLILLIN 440
FWAG+ST +RSE + AFFDGY+ + I T + + F +
Sbjct: 427 FWAGISTVRRSERLEAFFDGYITPETTIKTFIEQFDTAMKLRSDREAYDDFRSFQ----- 481
Query: 441 **QVPTLRSNLKRLTPIQFSNCFKINKYDKIQEKI 475
Q P + S L L QF+N + IN + K Q+ +
Sbjct: 482 --QRPQVLSGL--LFEEQFANVYTINMFQKFQDHL 512
>ref|XP_470381.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)] gi|41469648|gb|AAS07371.1| putative
far-red impaired response protein [Oryza sativa
(japonica cultivar-group)]
Length = 786
Score = 206 bits (524), Expect = 1e-51
Identities = 95/214 (44%), Positives = 139/214 (64%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFW D+RSRAAY F D V D+T L NR + F+GVNHHG+ +L GCGL S + E
Sbjct: 211 VFWADSRSRAAYQYFNDAVWIDTTCLRNRFDTPLVLFLGVNHHGELVLLGCGLFSDESTE 270
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
+++WL KS L CM+G P AI+T C +I+AAV EVF + HR WH+++ + EKL
Sbjct: 271 SFLWLLKSWLTCMKGWPPNAIVTDDCAAIKAAVREVFPNARHRISDWHVLRSISEKLGES 330
Query: 321 TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKSI 380
Q++ +K L+T++YDS++ EF+ + +I + LQ+NEW++ L+ +R WVP ++K
Sbjct: 331 AQFEGMKTELETVIYDSLKDDEFEARWNNLISRFGLQDNEWITFLYENRHFWVPAFLKDT 390
Query: 381 FWAGMSTTQRSESMNAFFDGYVNSKNLIGTICSA 414
FWAG+ST ES NAFF+ +N + + T S+
Sbjct: 391 FWAGLSTVNHHESPNAFFEDSINPETKLVTFLSS 424
>ref|XP_466647.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)] gi|47497942|dbj|BAD20147.1| putative
far-red impaired response protein [Oryza sativa
(japonica cultivar-group)] gi|47496827|dbj|BAD19587.1|
putative far-red impaired response protein [Oryza sativa
(japonica cultivar-group)]
Length = 853
Score = 191 bits (485), Expect = 4e-47
Identities = 97/206 (47%), Positives = 136/206 (65%), Gaps = 1/206 (0%)
Query: 201 VFWVDARSRAAYDSF-EDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDK 259
+FW DARS+AA+D + DV+ FD++YLT + ++ F GVN+HGQ +LFG GLLS
Sbjct: 263 LFWSDARSQAAHDYYGRDVIYFDTSYLTEKYDLPLVFFTGVNNHGQPVLFGTGLLSDLGV 322
Query: 260 ETYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNG 319
++YVWLF++ CM+G P AIIT +I AV +V + HR C + IMK V E L
Sbjct: 323 DSYVWLFRAFFACMKGCYPDAIITEHYNAILDAVRDVLPQVKHRLCLYRIMKDVAENLKA 382
Query: 320 LTQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
++K IKK LK + Y S++ASEF+ K+I ++ L ENE LSSL+ R+ W P Y+K
Sbjct: 383 HAEFKTIKKALKKVTYGSLKASEFEADWKKIILEHGLGENECLSSLYEHRQLWAPAYLKG 442
Query: 380 IFWAGMSTTQRSESMNAFFDGYVNSK 405
FWAGMS +QR ES+ +++DG+V K
Sbjct: 443 QFWAGMSVSQRGESIVSYYDGFVYPK 468
>ref|XP_478214.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)] gi|22093808|dbj|BAC07095.1| putative
far-red impaired response protein [Oryza sativa
(japonica cultivar-group)] gi|50509975|dbj|BAD30438.1|
putative far-red impaired response protein [Oryza sativa
(japonica cultivar-group)]
Length = 809
Score = 189 bits (481), Expect = 1e-46
Identities = 86/202 (42%), Positives = 126/202 (61%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFW DA+SR++Y+ F DVV+ + +++ + F FVG NHH Q +L GCGLL+ +
Sbjct: 244 VFWADAKSRSSYNYFGDVVAINVRNFSDQYEIQFVSFVGTNHHAQQVLLGCGLLAGRSLG 303
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
YVWLF + + CM P ++IT C + AV +VF + +RFC I+ ++PEKL
Sbjct: 304 AYVWLFDTWVRCMNSTPPPSVITNYCHDVAIAVKKVFPNARYRFCLLDILNELPEKLEET 363
Query: 321 TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKSI 380
+ EI +L +DSI +FD +M+E + L+ NEWLS LF R +W P+YVK
Sbjct: 364 EKKDEIVSAFSSLAFDSITMPDFDKDWQEMVEQFHLEGNEWLSKLFEVRTQWAPVYVKDS 423
Query: 381 FWAGMSTTQRSESMNAFFDGYV 402
FWAGMS T+RS+S + +FDG++
Sbjct: 424 FWAGMSITERSDSASDYFDGWL 445
>emb|CAB80483.1| hypothetical protein [Arabidopsis thaliana]
gi|4467124|emb|CAB37558.1| hypothetical protein
[Arabidopsis thaliana] gi|22531237|gb|AAM97122.1|
unknown protein [Arabidopsis thaliana]
gi|15233732|ref|NP_195531.1| far-red impaired responsive
protein, putative [Arabidopsis thaliana]
gi|7485859|pir||T05645 hypothetical protein F20D10.300 -
Arabidopsis thaliana
Length = 788
Score = 182 bits (463), Expect = 2e-44
Identities = 83/205 (40%), Positives = 131/205 (63%), Gaps = 1/205 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFW D ++ + F D V+FD+TY +NR + F+PF GVNHHGQ ILFGC + + +
Sbjct: 282 VFWADPKAIMDFTHFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPILFGCAFIINETEA 341
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
++VWLF + L M P +I T I+AA++ VF + HRFC WHI+KK EKL+ +
Sbjct: 342 SFVWLFNTWLAAMSAHPPVSITTDHDAVIRAAIMHVFPGARHRFCKWHILKKCQEKLSHV 401
Query: 321 -TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
++ + V + +F+ +++ Y L+++EWL +++SDRR+WVP+Y++
Sbjct: 402 FLKHPSFESDFHKCVNLTESVEDFERCWFSLLDKYELRDHEWLQAIYSDRRQWVPVYLRD 461
Query: 380 IFWAGMSTTQRSESMNAFFDGYVNS 404
F+A MS T RS+S+N++FDGY+N+
Sbjct: 462 TFFADMSLTHRSDSINSYFDGYINA 486
>gb|AAD51282.1| far-red impaired response protein [Arabidopsis thaliana]
Length = 827
Score = 181 bits (458), Expect = 6e-44
Identities = 86/206 (41%), Positives = 130/206 (62%), Gaps = 1/206 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
+FW DA+SR Y SF DVVSFD+TY+ + + F+GVNHH Q +L GC L++ + E
Sbjct: 258 LFWADAKSRDDYLSFNDVVSFDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVADESME 317
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNG- 319
T+VWL K+ L M GRAPK I+T Q + + +AV E+ + H F WH+++K+PE +
Sbjct: 318 TFVWLIKTWLRAMGGRAPKVILTDQDKFLMSAVSELLPNTRHCFALWHVLEKIPEYFSHV 377
Query: 320 LTQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
+ +++ ++ S EFD KM+ + L+ +EWL L R++WVP ++
Sbjct: 378 MKRHENFLLKFNKCIFRSWTDDEFDMRWWKMVSQFGLENDEWLLWLHEHRQKWVPTFMSD 437
Query: 380 IFWAGMSTTQRSESMNAFFDGYVNSK 405
+F AGMST+QRSES+N+FFD Y++ K
Sbjct: 438 VFLAGMSTSQRSESVNSFFDKYIHKK 463
>ref|NP_567455.1| far-red impaired response protein (FAR1) / far-red impaired
responsive protein (FAR1) [Arabidopsis thaliana]
Length = 768
Score = 181 bits (458), Expect = 6e-44
Identities = 86/206 (41%), Positives = 130/206 (62%), Gaps = 1/206 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
+FW DA+SR Y SF DVVSFD+TY+ + + F+GVNHH Q +L GC L++ + E
Sbjct: 199 LFWADAKSRDDYLSFNDVVSFDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVADESME 258
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNG- 319
T+VWL K+ L M GRAPK I+T Q + + +AV E+ + H F WH+++K+PE +
Sbjct: 259 TFVWLIKTWLRAMGGRAPKVILTDQDKFLMSAVSELLPNTRHCFALWHVLEKIPEYFSHV 318
Query: 320 LTQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
+ +++ ++ S EFD KM+ + L+ +EWL L R++WVP ++
Sbjct: 319 MKRHENFLLKFNKCIFRSWTDDEFDMRWWKMVSQFGLENDEWLLWLHEHRQKWVPTFMSD 378
Query: 380 IFWAGMSTTQRSESMNAFFDGYVNSK 405
+F AGMST+QRSES+N+FFD Y++ K
Sbjct: 379 VFLAGMSTSQRSESVNSFFDKYIHKK 404
>gb|AAM91710.1| unknown protein [Arabidopsis thaliana] gi|19424057|gb|AAL87259.1|
unknown protein [Arabidopsis thaliana]
gi|15219020|ref|NP_175661.1| far-red impaired responsive
protein, putative [Arabidopsis thaliana]
gi|5903066|gb|AAD55625.1| F6D8.26 [Arabidopsis thaliana]
gi|25405564|pir||G96565 F6D8.26 [imported] - Arabidopsis
thaliana
Length = 703
Score = 178 bits (452), Expect = 3e-43
Identities = 80/205 (39%), Positives = 129/205 (62%), Gaps = 1/205 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFW DA S+ + F DV+ DS+Y++ + + F GVNHHG++ L CG L+ + E
Sbjct: 280 VFWADAFSKVSCSYFGDVIFIDSSYISGKFEIPLVTFTGVNHHGKTTLLSCGFLAGETME 339
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
+Y WL K L M+ R+P+ I+T +C+ ++AA+ +VF SH RF HIM+K+PEKL GL
Sbjct: 340 SYHWLLKVWLSVMK-RSPQTIVTDRCKPLEAAISQVFPRSHQRFSLTHIMRKIPEKLGGL 398
Query: 321 TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKSI 380
Y ++K VY++++ EF+ M+ ++ + ENEWL SL+ +R +W P+Y+K
Sbjct: 399 HNYDAVRKAFTKAVYETLKVVEFEAAWGFMVHNFGVIENEWLRSLYEERAKWAPVYLKDT 458
Query: 381 FWAGMSTTQRSESMNAFFDGYVNSK 405
F+AG++ E++ FF+ YV+ +
Sbjct: 459 FFAGIAAAHPGETLKPFFERYVHKQ 483
>gb|AAX92857.1| transposon protein, putative, unclassified [Oryza sativa (japonica
cultivar-group)]
Length = 1106
Score = 177 bits (449), Expect = 7e-43
Identities = 84/198 (42%), Positives = 126/198 (63%), Gaps = 1/198 (0%)
Query: 206 ARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKETYVWL 265
A+ Y+ F DV++FD+TY TNR NM F+PFVGVN+H QS FGC LL + KE++ WL
Sbjct: 578 AKKELNYEHFGDVITFDTTYKTNRYNMPFAPFVGVNNHFQSTFFGCALLREETKESFAWL 637
Query: 266 FKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL-TQYK 324
F++ +CM G+ P I+T C S+ AA+ +VF + HR C WH++KK E + + ++ +
Sbjct: 638 FETFKDCMNGKEPIGILTDNCPSMAAAIRKVFPNTIHRVCKWHVLKKAKEFMGNIYSKRR 697
Query: 325 EIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKSIFWAG 384
KK ++ ++ EF+ HK+I DY+L+ N +L ++ RR+W +Y F+AG
Sbjct: 698 SFKKAFHKVLTQTLTEDEFEAAWHKLISDYQLENNVYLRHIWDIRRKWAFVYFAHRFFAG 757
Query: 385 MSTTQRSESMNAFFDGYV 402
M+TTQRSES N F +V
Sbjct: 758 MTTTQRSESANHVFKMFV 775
>emb|CAE02218.2| OSJNBb0002N06.8 [Oryza sativa (japonica cultivar-group)]
gi|50923349|ref|XP_472035.1| OSJNBb0002N06.8 [Oryza
sativa (japonica cultivar-group)]
Length = 885
Score = 177 bits (448), Expect = 9e-43
Identities = 85/204 (41%), Positives = 127/204 (61%), Gaps = 1/204 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
+FW A SR ++ F DV++FD+TY TN+ NM F+PFVGVN+H QS FGC LL + +E
Sbjct: 323 IFWSHAVSRLNFEHFGDVITFDTTYKTNKYNMPFAPFVGVNNHFQSTFFGCALLREETEE 382
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
++ WLF + ECM G+ P I+T C S+ AA+ VF + HR C WH++KK E + +
Sbjct: 383 SFTWLFNTFKECMNGKVPIGILTDNCPSMAAAIRTVFPNTIHRVCKWHVLKKAKEFMGNI 442
Query: 321 -TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
++ KK ++ ++ EF HK+I DY L+++ +L ++ RR+W +Y
Sbjct: 443 YSKRHTFKKAFHKVLTQTLTEEEFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYFSH 502
Query: 380 IFWAGMSTTQRSESMNAFFDGYVN 403
F+AGM+TTQRSES N F +V+
Sbjct: 503 RFFAGMTTTQRSESANHVFKMFVS 526
>ref|NP_908529.1| P0702D12.15 [Oryza sativa (japonica cultivar-group)]
Length = 832
Score = 177 bits (448), Expect = 9e-43
Identities = 85/204 (41%), Positives = 127/204 (61%), Gaps = 1/204 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
+FW A SR ++ F DV++FD+TY TN+ NM F+PFVGVN+H QS FGC LL + +E
Sbjct: 270 IFWSHAVSRLNFEHFGDVITFDTTYKTNKYNMPFAPFVGVNNHFQSTFFGCALLREETEE 329
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
++ WLF + ECM G+ P I+T C S+ AA+ VF + HR C WH++KK E + +
Sbjct: 330 SFTWLFNTFKECMNGKVPIGILTDNCPSMAAAIRTVFPNTIHRVCKWHVLKKAKEFMGNI 389
Query: 321 -TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
++ KK ++ ++ EF HK+I DY L+++ +L ++ RR+W +Y
Sbjct: 390 YSKRHTFKKAFHKVLTQTLTEEEFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYFSH 449
Query: 380 IFWAGMSTTQRSESMNAFFDGYVN 403
F+AGM+TTQRSES N F +V+
Sbjct: 450 RFFAGMTTTQRSESANHVFKMFVS 473
>dbj|BAD81770.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)]
Length = 883
Score = 171 bits (434), Expect = 4e-41
Identities = 84/204 (41%), Positives = 126/204 (61%), Gaps = 1/204 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
+FW A SR ++ F DV++FD+TY TN+ NM F+PFVGVN+H QS FGC LL + +E
Sbjct: 321 IFWSHAVSRLNFEHFGDVITFDTTYKTNKYNMPFAPFVGVNNHFQSTFFGCALLREETEE 380
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
++ WLF + ECM G+ P I+T C S+ AA+ VF + HR C H++KK E + +
Sbjct: 381 SFTWLFNTFKECMNGKVPIGILTDNCPSMAAAIRTVFPNTIHRVCKSHVLKKAKEFMGNI 440
Query: 321 -TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
++ KK ++ ++ EF HK+I DY L+++ +L ++ RR+W +Y
Sbjct: 441 YSKCHTFKKAFHKVLTQTLTEEEFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYFSH 500
Query: 380 IFWAGMSTTQRSESMNAFFDGYVN 403
F+AGM+TTQRSES N F +V+
Sbjct: 501 RFFAGMTTTQRSESANHVFKMFVS 524
>ref|NP_178118.1| far-red impaired responsive protein, putative [Arabidopsis
thaliana] gi|5902364|gb|AAD55466.1| Hypothetical protein
[Arabidopsis thaliana] gi|12324580|gb|AAG52241.1|
hypothetical protein; 6424-4334 [Arabidopsis thaliana]
gi|25406623|pir||E96831 hypothetical protein F18B13.10
[imported] - Arabidopsis thaliana
Length = 696
Score = 170 bits (431), Expect = 8e-41
Identities = 84/204 (41%), Positives = 119/204 (58%), Gaps = 1/204 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFW+DAR+RAAY F DV+ FD+T L+N + FVG+NHHG +IL GCGLL+ + E
Sbjct: 275 VFWIDARARAAYSHFGDVLLFDTTCLSNAYELPLVAFVGINHHGDTILLGCGLLADQSFE 334
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
TYVWLF++ L CM GR P+ IT QC++++ AV EVF +HHR H++ + + + L
Sbjct: 335 TYVWLFRAWLTCMLGRPPQIFITEQCKAMRTAVSEVFPRAHHRLSLTHVLHNICQSVVQL 394
Query: 321 TQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKSI 380
L +VY ++ EF+ +MI + + NE + +F DR W P+Y+K
Sbjct: 395 QDSDLFPMALNRVVYGCLKVEEFETAWEEMIIRFGMTNNETIRDMFQDRELWAPVYLKDT 454
Query: 381 FWAGMSTTQRSESMNAF-FDGYVN 403
F AG T F F GYV+
Sbjct: 455 FLAGALTFPLGNVAAPFIFSGYVH 478
>emb|CAB78999.1| putative protein [Arabidopsis thaliana] gi|2827653|emb|CAA16607.1|
putative protein [Arabidopsis thaliana]
gi|15235256|ref|NP_193732.1| far-red impaired responsive
family protein / FAR1 family protein [Arabidopsis
thaliana] gi|7485739|pir||T04883 hypothetical protein
F18F4.90 - Arabidopsis thaliana
Length = 672
Score = 169 bits (427), Expect = 2e-40
Identities = 80/207 (38%), Positives = 128/207 (61%), Gaps = 2/207 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLL-SRKDK 259
+FWVDA+ R Y F DVVS D+T++ N + F GVNHHGQ +L G GLL + + K
Sbjct: 189 IFWVDAKGRFDYTCFSDVVSIDTTFIKNEYKLPLVAFTGVNHHGQFLLLGFGLLLTDESK 248
Query: 260 ETYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNG 319
+VWLF++ L+ M G P+ I+T + ++ AV+EVF S H F W + ++PEKL
Sbjct: 249 SGFVWLFRAWLKAMHGCRPRVILTKHDQMLKEAVLEVFPSSRHCFYMWDTLGQMPEKLGH 308
Query: 320 LTQY-KEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVK 378
+ + K++ + +Y S ++ +F+ ++++ + +++N WL SL+ DR WVP+Y+K
Sbjct: 309 VIRLEKKLVDEINDAIYGSCQSEDFEKNWWEVVDRFHMRDNVWLQSLYEDREYWVPVYMK 368
Query: 379 SIFWAGMSTTQRSESMNAFFDGYVNSK 405
+ AGM T QRS+S+N+ D Y+ K
Sbjct: 369 DVSLAGMCTAQRSDSVNSGLDKYIQRK 395
>gb|AAQ62876.1| At1g76320 [Arabidopsis thaliana] gi|62320160|dbj|BAD94369.1|
putative phytochrome A signaling protein [Arabidopsis
thaliana]
Length = 732
Score = 168 bits (426), Expect = 3e-40
Identities = 82/204 (40%), Positives = 127/204 (62%), Gaps = 1/204 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFWVDA+ Y SF DVVSF+++Y ++ + FVGVNHH Q +L GCGLL+
Sbjct: 195 VFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVY 254
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
TYVWL +S L M G+ PK ++T Q +I+AA+ V E+ H +C WH++ ++P L+
Sbjct: 255 TYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLPETRHCYCLWHVLDQLPRNLDYW 314
Query: 321 TQYKE-IKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
+ +++ K L +Y S EFD K+I+ + L++ W+ SL+ +R+ W P +++
Sbjct: 315 SMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFHLRDVPWMRSLYEERKFWAPTFMRG 374
Query: 380 IFWAGMSTTQRSESMNAFFDGYVN 403
I +AG+S RSES+N+ FD YV+
Sbjct: 375 ITFAGLSMRCRSESVNSLFDRYVH 398
>ref|NP_177759.1| far-red impaired responsive protein, putative [Arabidopsis
thaliana] gi|6573712|gb|AAF17632.1| T23E18.25
[Arabidopsis thaliana]
Length = 732
Score = 168 bits (426), Expect = 3e-40
Identities = 82/204 (40%), Positives = 127/204 (62%), Gaps = 1/204 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFWVDA+ Y SF DVVSF+++Y ++ + FVGVNHH Q +L GCGLL+
Sbjct: 195 VFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVY 254
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
TYVWL +S L M G+ PK ++T Q +I+AA+ V E+ H +C WH++ ++P L+
Sbjct: 255 TYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLPETRHCYCLWHVLDQLPRNLDYW 314
Query: 321 TQYKE-IKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
+ +++ K L +Y S EFD K+I+ + L++ W+ SL+ +R+ W P +++
Sbjct: 315 SMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFHLRDVPWMRSLYEERKFWAPTFMRG 374
Query: 380 IFWAGMSTTQRSESMNAFFDGYVN 403
I +AG+S RSES+N+ FD YV+
Sbjct: 375 ITFAGLSMRCRSESVNSLFDRYVH 398
>pir||G96790 hypothetical protein F15M4.18 [imported] - Arabidopsis thaliana
gi|6554486|gb|AAF16668.1| putative phytochrome A
signaling protein; 74057-72045 [Arabidopsis thaliana]
Length = 670
Score = 168 bits (426), Expect = 3e-40
Identities = 82/204 (40%), Positives = 127/204 (62%), Gaps = 1/204 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFWVDA+ Y SF DVVSF+++Y ++ + FVGVNHH Q +L GCGLL+
Sbjct: 195 VFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVY 254
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
TYVWL +S L M G+ PK ++T Q +I+AA+ V E+ H +C WH++ ++P L+
Sbjct: 255 TYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLPETRHCYCLWHVLDQLPRNLDYW 314
Query: 321 TQYKE-IKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
+ +++ K L +Y S EFD K+I+ + L++ W+ SL+ +R+ W P +++
Sbjct: 315 SMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFHLRDVPWMRSLYEERKFWAPTFMRG 374
Query: 380 IFWAGMSTTQRSESMNAFFDGYVN 403
I +AG+S RSES+N+ FD YV+
Sbjct: 375 ITFAGLSMRCRSESVNSLFDRYVH 398
>gb|AAF66982.1| transposase [Zea mays]
Length = 709
Score = 167 bits (424), Expect = 5e-40
Identities = 85/207 (41%), Positives = 126/207 (60%), Gaps = 2/207 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
+ W DA R +Y F D+VS D+TY TN+ NM F+PF GVNHH Q + FG L+ + E
Sbjct: 227 ICWADATCRKSYTHFGDLVSVDATYSTNQYNMRFAPFTGVNHHMQRVFFGAAFLANEKIE 286
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLNGL 320
+Y WLF++ L M G+AP+ IIT + SI++A+ ++ HR C WHIM+KV EK+
Sbjct: 287 SYEWLFRTFLVAMGGKAPRLIITDEDASIKSAIRTTLPDTIHRLCMWHIMEKVSEKVGHP 346
Query: 321 TQY-KEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
T + KE L T V+ S EF+ + +++ Y L+ NEWL++ + R W+P +
Sbjct: 347 TSHDKEFWDALNTCVWGSETPEEFEMRWNALMDAYGLESNEWLANRYKIRESWIPAFFMD 406
Query: 380 IFWAG-MSTTQRSESMNAFFDGYVNSK 405
AG + TT RSES N+FF+ +++ K
Sbjct: 407 TPLAGVLRTTSRSESANSFFNRFIHRK 433
>ref|XP_475123.1| putative Mutator-like transposase [Oryza sativa (japonica
cultivar-group)] gi|46063440|gb|AAS79743.1| putative
Mutator-like transposase [Oryza sativa (japonica
cultivar-group)]
Length = 1510
Score = 166 bits (419), Expect = 2e-39
Identities = 87/207 (42%), Positives = 126/207 (60%), Gaps = 2/207 (0%)
Query: 201 VFWVDARSRAAYDSFEDVVSFDSTYLTNR*NMSFSPFVGVNHHGQSILFGCGLLSRKDKE 260
VFW DA R Y F DV+S DSTY TN+ NM F PF GVNHH QS+ G L+ + E
Sbjct: 919 VFWADAICRKNYSVFGDVLSVDSTYSTNQYNMKFVPFTGVNHHLQSVFLGASFLADEKIE 978
Query: 261 TYVWLFKS*LECMRGRAPKAIITYQCRSIQAAVVEVFSESHHRFCFWHIMKKVPEKLN-G 319
++VWLF++ L+ G AP+ IIT + S++AA+ ++ + HR C WHIM+KVPEK+
Sbjct: 979 SFVWLFQTFLKATGGVAPRLIITDEDASMKAAIAQILPNTVHRLCMWHIMEKVPEKVGPS 1038
Query: 320 LTQYKEIKKTLKTLVYDSIEASEFDDG*HKMIEDYRLQENEWLSSLFSDRRRWVPIYVKS 379
+ + E L V+ S ++ +F+ + ++ Y L NEW S+ F R+ W+ Y
Sbjct: 1039 IREDGEFWDRLHKCVWGSEDSDDFESEWNSIMAKYGLIGNEWFSTKFDIRQSWILAYFMD 1098
Query: 380 IFWAG-MSTTQRSESMNAFFDGYVNSK 405
I AG +STT RSES N+FF+ +++ K
Sbjct: 1099 IPLAGILSTTSRSESANSFFNRFIHRK 1125
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.358 0.160 0.581
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 669,010,895
Number of Sequences: 2540612
Number of extensions: 23555948
Number of successful extensions: 104466
Number of sequences better than 10.0: 187
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 104126
Number of HSP's gapped (non-prelim): 207
length of query: 482
length of database: 863,360,394
effective HSP length: 132
effective length of query: 350
effective length of database: 527,999,610
effective search space: 184799863500
effective search space used: 184799863500
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0233.7