BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0226.9
(223 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 233 2e-60
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 233 2e-60
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 233 2e-60
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 232 7e-60
gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Ar... 231 1e-59
ref|NP_174828.1| AT hook motif-containing protein-related [Arabi... 231 1e-59
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 229 3e-59
dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana] 226 5e-58
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 226 5e-58
ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana] 221 9e-57
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 214 2e-54
gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cult... 212 5e-54
gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultiva... 212 5e-54
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 211 1e-53
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 210 2e-53
gb|AAD32757.1| putative helicase [Arabidopsis thaliana] gi|25353... 203 3e-51
ref|XP_550305.1| helicase-like protein [Oryza sativa (japonica c... 201 1e-50
ref|NP_916487.1| helicase-like protein [Oryza sativa (japonica c... 201 1e-50
gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353... 200 3e-50
ref|XP_481695.1| helicase-like protein [Oryza sativa (japonica c... 199 5e-50
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 233 bits (595), Expect = 2e-60
Identities = 116/218 (53%), Positives = 156/218 (71%), Gaps = 1/218 (0%)
Query: 6 FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSND 65
FF++RAIL PT + V +N +++ ++ EY SSD D E +TEF N
Sbjct: 1084 FFRERAILCPTNDDVSEVNNHIMDLLPGEVKEYFSSDKICDFDTSVERDAN-MSTEFLNA 1142
Query: 66 TKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDK 125
K SG+PNH L LK+G P+ML+RN+DQ LCNGTRL V +LG+R I A V+TG+N +K
Sbjct: 1143 IKCSGVPNHVLRLKLGVPVMLIRNLDQKYGLCNGTRLQVTQLGDRVIEAKVLTGSNAGNK 1202
Query: 126 VHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLY 185
V++ R+ L +D + P +F+ RQFP+ CF MTINKSQGQ+LS VG++LPRPVF+HGQLY
Sbjct: 1203 VYLPRLVLTPADFRIPFRFQRRQFPVVPCFGMTINKSQGQSLSHVGIYLPRPVFSHGQLY 1262
Query: 186 VALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
VA+SRV+SR+GLK+ I+DE G + +T NVVFKEVF+N
Sbjct: 1263 VAVSRVKSRRGLKILIIDEEGNRGKTTTNVVFKEVFQN 1300
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 233 bits (595), Expect = 2e-60
Identities = 123/219 (56%), Positives = 153/219 (69%), Gaps = 1/219 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQ RAILAP E V +N YML + + E YLS+DS SD DS +K T +F N
Sbjct: 1210 KFFQRRAILAPKNEDVNTINQYMLEHLDSEERIYLSADSIDPSDSDS-LKNPVITPDFLN 1268
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K SGMP+H L LKVG P+MLLRN+D LCNGTRL + +L + A VITG +
Sbjct: 1269 SIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCSHIVEAKVITGDRIGQ 1328
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V+I +++ SD+K P K R RQFP+++ F MTINKSQGQ+L QVGL+LP+PVF+HGQL
Sbjct: 1329 IVYIPLINITPSDTKLPFKMRRRQFPLSVAFVMTINKSQGQSLEQVGLYLPKPVFSHGQL 1388
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
YVALSRV S+ GLK+ ILD+ GK Q T NVVFKEVF+N
Sbjct: 1389 YVALSRVTSKTGLKILILDKEGKIQKQTTNVVFKEVFQN 1427
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 233 bits (595), Expect = 2e-60
Identities = 123/219 (56%), Positives = 153/219 (69%), Gaps = 1/219 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQ RAILAP E V +N YML + + E YLS+DS SD DS +K T +F N
Sbjct: 1201 KFFQRRAILAPKNEDVNTINQYMLEHLDSEERIYLSADSIDPSDSDS-LKNPVITPDFLN 1259
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K SGMP+H L LKVG P+MLLRN+D LCNGTRL + +L + A VITG +
Sbjct: 1260 SIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCSHIVEAKVITGDRIGQ 1319
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V+I +++ SD+K P K R RQFP+++ F MTINKSQGQ+L QVGL+LP+PVF+HGQL
Sbjct: 1320 IVYIPLINITPSDTKLPFKMRRRQFPLSVAFVMTINKSQGQSLEQVGLYLPKPVFSHGQL 1379
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
YVALSRV S+ GLK+ ILD+ GK Q T NVVFKEVF+N
Sbjct: 1380 YVALSRVTSKTGLKILILDKEGKIQKQTTNVVFKEVFQN 1418
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 232 bits (591), Expect = 7e-60
Identities = 122/219 (55%), Positives = 155/219 (70%), Gaps = 1/219 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQ RAILAPT E V +N YML + + E YLS+DS +D DS + T +F N
Sbjct: 1533 KFFQRRAILAPTNEDVNTINQYMLEHLKSEERIYLSADSIDPTDSDS-LANPVITPDFLN 1591
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
+ +GMP+H L LKVG P+MLLRN+D LCNGTRL + +L ++ + A VIT + D
Sbjct: 1592 SIQLTGMPHHALRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLAKQVVQAKVITRDRIGD 1651
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V I ++L SD+K P K R RQFP+++ FAMTINKSQGQ+L QVGL+LP+PVF+HGQL
Sbjct: 1652 IVLIPLINLTPSDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEQVGLYLPKPVFSHGQL 1711
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
YVALSRV S+KGLK+ ILD+ G Q T NVVFKEVF+N
Sbjct: 1712 YVALSRVTSKKGLKILILDKDGNMQKQTTNVVFKEVFQN 1750
>gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Arabidopsis
thaliana]
Length = 729
Score = 231 bits (588), Expect = 1e-59
Identities = 120/219 (54%), Positives = 153/219 (69%), Gaps = 1/219 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQ RAILAP E V +N Y+L + A E YLS+DS +D DS + T +F N
Sbjct: 510 KFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADSIDPTDSDS-LNNPVITPDFLN 568
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K G+PNH L LKVG P+MLLRN+D LCNGTRL + +L + + A VITG + +
Sbjct: 569 SIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDRIGN 628
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V I ++L +D+K P K R RQFP+++ FAMTINKSQGQ+L +GL+LP+PVF+HGQL
Sbjct: 629 IVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEHIGLYLPKPVFSHGQL 688
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
YVALSRV S+KGLK+ ILD+ GK Q T NVVFKEVF+N
Sbjct: 689 YVALSRVTSKKGLKILILDKDGKLQKQTTNVVFKEVFQN 727
>ref|NP_174828.1| AT hook motif-containing protein-related [Arabidopsis thaliana]
gi|25511694|pir||D86481 189.6K hypothetical protein
F10O5.11 - Arabidopsis thaliana
gi|12322087|gb|AAG51081.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1678
Score = 231 bits (588), Expect = 1e-59
Identities = 120/219 (54%), Positives = 153/219 (69%), Gaps = 1/219 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQ RAILAP E V +N Y+L + A E YLS+DS +D DS + T +F N
Sbjct: 1459 KFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADSIDPTDSDS-LNNPVITPDFLN 1517
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K G+PNH L LKVG P+MLLRN+D LCNGTRL + +L + + A VITG + +
Sbjct: 1518 SIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDRIGN 1577
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V I ++L +D+K P K R RQFP+++ FAMTINKSQGQ+L +GL+LP+PVF+HGQL
Sbjct: 1578 IVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEHIGLYLPKPVFSHGQL 1637
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
YVALSRV S+KGLK+ ILD+ GK Q T NVVFKEVF+N
Sbjct: 1638 YVALSRVTSKKGLKILILDKDGKLQKQTTNVVFKEVFQN 1676
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 229 bits (585), Expect = 3e-59
Identities = 119/219 (54%), Positives = 151/219 (68%), Gaps = 1/219 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQ RAIL P V +N ML + YLS+DS D S + T +F N
Sbjct: 879 KFFQQRAILCPRNTDVNTINDIMLDKLNGELVTYLSADSIDPQDAAS-LNNPVLTPDFLN 937
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K SG+PNH L LK+GTP+MLLRNID LCNGTRL V ++G + A VITG V D
Sbjct: 938 SIKLSGLPNHNLTLKIGTPVMLLRNIDPKGGLCNGTRLQVTQMGNHILEARVITGDRVGD 997
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
KV I++ + SD+K P + R RQFPIA+ FAMTINKSQGQ+L +VG++LP+PVF+HGQL
Sbjct: 998 KVIIIKSQISPSDTKLPFRMRRRQFPIAVAFAMTINKSQGQSLKEVGIYLPKPVFSHGQL 1057
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
YVALSRV S+KGLK+ I+D+ G Q+ T+NVVFKE+F+N
Sbjct: 1058 YVALSRVTSKKGLKVLIVDKEGNTQSQTMNVVFKEIFQN 1096
>dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 226 bits (575), Expect = 5e-58
Identities = 116/219 (52%), Positives = 150/219 (67%), Gaps = 1/219 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQDRAIL PT + V +N +ML + E Y SSDS SD ++ K +T +F N
Sbjct: 1451 KFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIYRSSDSIDPSDTRAD-KNPVYTPDFLN 1509
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K SG+PNH L LKVG P+MLLRN+D L NGTRL + LG++ + ++TGT V
Sbjct: 1510 KIKISGLPNHLLWLKVGCPVMLLRNLDSHGGLMNGTRLQIVRLGDKLVQGRILTGTRVGK 1569
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V I RM L SD + P K + RQFP+++ FAMTINKSQGQ+L VG++LP+PVF+HGQL
Sbjct: 1570 LVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFAMTINKSQGQSLGNVGIYLPKPVFSHGQL 1629
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
YVA+SRV+S+ GLK+ I D GKQ+ T NVVFKE+F N
Sbjct: 1630 YVAMSRVKSKGGLKVLITDSKGKQKNETTNVVFKEIFRN 1668
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 226 bits (575), Expect = 5e-58
Identities = 116/219 (52%), Positives = 150/219 (67%), Gaps = 1/219 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQDRAIL PT + V +N +ML + E Y SSDS SD ++ K +T +F N
Sbjct: 1255 KFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIYRSSDSIDPSDTRAD-KNPVYTPDFLN 1313
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K SG+PNH L LKVG P+MLLRN+D L NGTRL + LG++ + ++TGT V
Sbjct: 1314 KIKISGLPNHLLWLKVGCPVMLLRNLDSHGGLMNGTRLQIVRLGDKLVQGRILTGTRVGK 1373
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V I RM L SD + P K + RQFP+++ FAMTINKSQGQ+L VG++LP+PVF+HGQL
Sbjct: 1374 LVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFAMTINKSQGQSLGNVGIYLPKPVFSHGQL 1433
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
YVA+SRV+S+ GLK+ I D GKQ+ T NVVFKE+F N
Sbjct: 1434 YVAMSRVKSKGGLKVLITDSKGKQKNETTNVVFKEIFRN 1472
>ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana]
Length = 1033
Score = 221 bits (564), Expect = 9e-57
Identities = 118/219 (53%), Positives = 150/219 (67%), Gaps = 1/219 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQ RAILAPT E V +N Y+L + A E YLS+DS +D +S + T +F N
Sbjct: 814 KFFQGRAILAPTNEDVNTINEYLLEQLHAEERIYLSADSIDPTDSNS-LNNPVITPDFLN 872
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K +G+PNH L LKV P+MLLRN+D LCNGTRL + +L + + A VITG +
Sbjct: 873 SIKLAGLPNHSLRLKVSAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDIIGH 932
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V I ++L +D+K P K R RQFP+++ FAMTIN SQGQ+L VGL+LP+ VF+HGQL
Sbjct: 933 IVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINTSQGQSLEHVGLYLPKAVFSHGQL 992
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
YVALSRV S+KGLK ILD+ GK Q T NVVFKEVF+N
Sbjct: 993 YVALSRVTSKKGLKFLILDKDGKLQKQTTNVVFKEVFQN 1031
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 214 bits (544), Expect = 2e-54
Identities = 109/218 (50%), Positives = 149/218 (68%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
++ ++RAIL PT + V LN Y++ I + YLS DS +S S + TEF N
Sbjct: 1356 KYLEERAILCPTNDDVNELNEYIMDQIQGDKVTYLSHDSVSKSMSYSHEMEMLYPTEFLN 1415
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K G+PNHQL LKVG P+MLLRNI+Q A LCNGTR+ + G+R I A +ITGT++ D
Sbjct: 1416 SLKHPGIPNHQLKLKVGLPVMLLRNINQNAGLCNGTRMRITRFGKRVIEAEIITGTHIGD 1475
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V I ++ + ++ K+P +QFP+++CFAMTINKSQGQTL++VGL+LPR VFTHGQL
Sbjct: 1476 MVCIPQIIMSPNERKWPFVLNRKQFPLSVCFAMTINKSQGQTLNKVGLYLPRQVFTHGQL 1535
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFE 222
YVA+SRV SR GLK+ I D+ + N+V+KE+F+
Sbjct: 1536 YVAVSRVTSRDGLKIMIADKECPGEGMVKNIVYKEIFQ 1573
>gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37535030|ref|NP_921817.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1477
Score = 212 bits (540), Expect = 5e-54
Identities = 109/217 (50%), Positives = 146/217 (67%)
Query: 6 FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSND 65
+ ++RAIL P E V LN Y++ I + YLS DS +S S + TEF N
Sbjct: 1261 YLEERAILCPVNENVNELNEYIMDQIQGDKVTYLSRDSVSKSVSYSHEMEMLYPTEFLNS 1320
Query: 66 TKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDK 125
SG+PNHQL LKVG P+MLLRNI+Q+A LCNGTR+ + LG + I A +ITGT+ D
Sbjct: 1321 LNHSGIPNHQLKLKVGLPVMLLRNINQSAGLCNGTRMTITRLGNKVIEAQIITGTHSGDM 1380
Query: 126 VHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLY 185
V I ++ + ++ K+P +QFP+++CFAMTINKSQGQTL++VGL+LPR VFTHGQLY
Sbjct: 1381 VCIPQIIMSPTEPKWPFMLNRKQFPLSVCFAMTINKSQGQTLNKVGLYLPRQVFTHGQLY 1440
Query: 186 VALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFE 222
VA+SRV SR GLK+ I DE + N+V+KE+ +
Sbjct: 1441 VAVSRVTSRDGLKILIADEECPGEGMVKNIVYKEILQ 1477
>gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1501
Score = 212 bits (540), Expect = 5e-54
Identities = 109/217 (50%), Positives = 146/217 (67%)
Query: 6 FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSND 65
+ ++RAIL P E V LN Y++ I + YLS DS +S S + TEF N
Sbjct: 1285 YLEERAILCPVNENVNELNEYIMDQIQGDKVTYLSRDSVSKSVSYSHEMEMLYPTEFLNS 1344
Query: 66 TKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDK 125
SG+PNHQL LKVG P+MLLRNI+Q+A LCNGTR+ + LG + I A +ITGT+ D
Sbjct: 1345 LNHSGIPNHQLKLKVGLPVMLLRNINQSAGLCNGTRMTITRLGNKVIEAQIITGTHSGDM 1404
Query: 126 VHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLY 185
V I ++ + ++ K+P +QFP+++CFAMTINKSQGQTL++VGL+LPR VFTHGQLY
Sbjct: 1405 VCIPQIIMSPTEPKWPFMLNRKQFPLSVCFAMTINKSQGQTLNKVGLYLPRQVFTHGQLY 1464
Query: 186 VALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFE 222
VA+SRV SR GLK+ I DE + N+V+KE+ +
Sbjct: 1465 VAVSRVTSRDGLKILIADEECPGEGMVKNIVYKEILQ 1501
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 211 bits (537), Expect = 1e-53
Identities = 107/217 (49%), Positives = 149/217 (68%), Gaps = 2/217 (0%)
Query: 6 FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSD-EDSEIKVEWFTTEFSN 64
F + RAIL P E +N +++ MI E YLS D+ ++ DSE V + TEF N
Sbjct: 1419 FLEQRAILCPRNETAREINEFIMNMIEGEEITYLSCDTVCKATTNDSETDV-LYPTEFLN 1477
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
GMPNH L LKVG P+MLLRNI+Q++ LCNGTR+ + +LG+RFI A +ITGT+V +
Sbjct: 1478 SLNFPGMPNHVLKLKVGLPVMLLRNINQSSGLCNGTRMTITQLGKRFIEAQIITGTHVGE 1537
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
KV+I R+ + ++S +P + RQ+P+++CFAMTINKSQGQ+L+ VGL+LP+ VFTHGQL
Sbjct: 1538 KVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINKSQGQSLNMVGLYLPKQVFTHGQL 1597
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVF 221
YVA SRV R GL++ + D + N+V+KE+F
Sbjct: 1598 YVAFSRVTRRDGLRIMLDDNESPGEHMVRNIVYKEIF 1634
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 210 bits (535), Expect = 2e-53
Identities = 106/217 (48%), Positives = 149/217 (67%), Gaps = 2/217 (0%)
Query: 6 FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSD-EDSEIKVEWFTTEFSN 64
F + RAIL P E +N +++ MI E YLS D+ ++ DSE V + TEF N
Sbjct: 1310 FLEQRAILCPRNETARKINEFIMNMIEGEEITYLSCDTVCKATTNDSETDV-LYPTEFLN 1368
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
GMPNH L LK+G P+MLLRNI+Q++ LCNGTR+ + +LG+RFI A +ITGT+V +
Sbjct: 1369 SLNFPGMPNHVLKLKLGLPVMLLRNINQSSGLCNGTRMTITQLGKRFIEAQIITGTHVGE 1428
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
KV+I R+ + ++S +P + RQ+P+++CFAMTINKSQGQ+L+ VGL+LP+ VFTHGQL
Sbjct: 1429 KVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINKSQGQSLNMVGLYLPKQVFTHGQL 1488
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVF 221
YVA SRV R GL++ + D + N+V+KE+F
Sbjct: 1489 YVAFSRVTRRDGLRIMLDDNESPGEHMVRNIVYKEIF 1525
>gb|AAD32757.1| putative helicase [Arabidopsis thaliana] gi|25353663|pir||H84486
probable helicase [imported] - Arabidopsis thaliana
Length = 1241
Score = 203 bits (517), Expect = 3e-51
Identities = 102/186 (54%), Positives = 133/186 (70%), Gaps = 1/186 (0%)
Query: 38 YLSSDSALRSDEDSEIKVEWFTTEFSNDTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLC 97
YLS+DS + + + + FT F N K SG+ NH L LK+GTP+MLL+NID LC
Sbjct: 1054 YLSADS-IDPQDPASLNNPVFTPYFLNSIKLSGLSNHNLTLKIGTPVMLLKNIDPKGGLC 1112
Query: 98 NGTRLIVDELGERFIGATVITGTNVNDKVHILRMDLVLSDSKFPIKFRIRQFPIAICFAM 157
NGTRL V ++G + A VITG V DKV I++ + SD+K P + R RQFPIA+ FAM
Sbjct: 1113 NGTRLQVTQMGNHILEARVITGDRVRDKVIIIKAQISPSDTKLPFRMRRRQFPIAVAFAM 1172
Query: 158 TINKSQGQTLSQVGLFLPRPVFTHGQLYVALSRVRSRKGLKLCILDEAGKQQTSTVNVVF 217
I KSQGQ+L +V ++LPRPVF+HGQLYVALSRV S+KGLK+ I+D+ G Q+ T+NVVF
Sbjct: 1173 RIKKSQGQSLKEVEIYLPRPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVVF 1232
Query: 218 KEVFEN 223
KE+F+N
Sbjct: 1233 KEIFQN 1238
>ref|XP_550305.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|55296801|dbj|BAD68127.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1427
Score = 201 bits (512), Expect = 1e-50
Identities = 99/218 (45%), Positives = 146/218 (66%)
Query: 6 FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSND 65
+ ++RAILA T E V+ +N Y+L ++ E EY S+D+ + + + + E+ N
Sbjct: 1207 YLKNRAILATTNEIVDEVNNYILSLVPNQEKEYYSADTLSQCMDTTNDADILYPVEYLNS 1266
Query: 66 TKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDK 125
++ P H L LKVG PI+LLRN++Q LCNGTRLI+ LG+ I +ITGT++ +K
Sbjct: 1267 LNANNFPTHVLKLKVGVPIILLRNLNQNLGLCNGTRLIITNLGDNIIEGIIITGTHIGEK 1326
Query: 126 VHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLY 185
+I R++L +++P R FPI +C++MTINKSQGQTLS VGL+L +PVFTHGQLY
Sbjct: 1327 AYIPRINLTTRGNQWPFTLCRRHFPIKVCYSMTINKSQGQTLSNVGLYLKKPVFTHGQLY 1386
Query: 186 VALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
VA+SRV + KGLK+ I +E G T T N+V++E+ ++
Sbjct: 1387 VAISRVSNSKGLKILIENEDGTCATQTKNIVYREILDS 1424
>ref|NP_916487.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 1602
Score = 201 bits (512), Expect = 1e-50
Identities = 99/218 (45%), Positives = 146/218 (66%)
Query: 6 FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSND 65
+ ++RAILA T E V+ +N Y+L ++ E EY S+D+ + + + + E+ N
Sbjct: 1382 YLKNRAILATTNEIVDEVNNYILSLVPNQEKEYYSADTLSQCMDTTNDADILYPVEYLNS 1441
Query: 66 TKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDK 125
++ P H L LKVG PI+LLRN++Q LCNGTRLI+ LG+ I +ITGT++ +K
Sbjct: 1442 LNANNFPTHVLKLKVGVPIILLRNLNQNLGLCNGTRLIITNLGDNIIEGIIITGTHIGEK 1501
Query: 126 VHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLY 185
+I R++L +++P R FPI +C++MTINKSQGQTLS VGL+L +PVFTHGQLY
Sbjct: 1502 AYIPRINLTTRGNQWPFTLCRRHFPIKVCYSMTINKSQGQTLSNVGLYLKKPVFTHGQLY 1561
Query: 186 VALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
VA+SRV + KGLK+ I +E G T T N+V++E+ ++
Sbjct: 1562 VAISRVSNSKGLKILIENEDGTCATQTKNIVYREILDS 1599
>gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353667|pir||F84517
probable helicase [imported] - Arabidopsis thaliana
Length = 1265
Score = 200 bits (508), Expect = 3e-50
Identities = 104/203 (51%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
+FFQ RAILA E V +N Y+L + A E YLS+DS +D DS + T +F N
Sbjct: 1063 KFFQGRAILASKNEDVNTINEYLLDQLHAEERIYLSADSIDPTDSDS-LSNPVITPDFLN 1121
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
K G+PNH L LKVG P++LLRN+D LCNGTRL + +L + + A VITG +
Sbjct: 1122 SIKLPGLPNHSLRLKVGAPVLLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDRIGH 1181
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
+ I ++L +++K P K R RQFP+++ F MTINKS+GQ+L VGL+LP+PVF+HGQL
Sbjct: 1182 IILIPTVNLTPTNTKLPFKMRRRQFPLSVAFVMTINKSEGQSLEHVGLYLPKPVFSHGQL 1241
Query: 185 YVALSRVRSRKGLKLCILDEAGK 207
YVALSRV S+KGLK+ ILD+ GK
Sbjct: 1242 YVALSRVTSKKGLKILILDKDGK 1264
>ref|XP_481695.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|38424032|dbj|BAD01692.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|38637630|dbj|BAD03910.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1430
Score = 199 bits (506), Expect = 5e-50
Identities = 97/216 (44%), Positives = 143/216 (65%)
Query: 5 QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
++ RAI+ PT V+ +N Y++G++ YLS D+ +S E + EF N
Sbjct: 1172 EYLASRAIVCPTNTTVDEINDYIIGLVPGDSRVYLSCDTISKSSEQIPDFDLLYPPEFLN 1231
Query: 65 DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
++ P H+L+LK G +MLLRN++Q+ LCNGTRL+V LG+R + V+TG+N+ +
Sbjct: 1232 SINATNFPTHKLVLKEGVVVMLLRNLNQSIGLCNGTRLLVTVLGDRILQCIVLTGSNIGE 1291
Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
V+I R+ L + K+P + RQFP+ +C++MTINKSQGQTL +VG++L +PVFTHGQL
Sbjct: 1292 TVYIPRITLGTTKMKWPFTLQRRQFPVRVCYSMTINKSQGQTLQRVGVYLRKPVFTHGQL 1351
Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEV 220
YVA+SRV SR GLK+ I ++ G T T N+V+ EV
Sbjct: 1352 YVAISRVTSRSGLKILIENDDGSCGTQTKNIVYSEV 1387
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.137 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 336,309,832
Number of Sequences: 2540612
Number of extensions: 12816900
Number of successful extensions: 27578
Number of sequences better than 10.0: 268
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 27168
Number of HSP's gapped (non-prelim): 317
length of query: 223
length of database: 863,360,394
effective HSP length: 123
effective length of query: 100
effective length of database: 550,865,118
effective search space: 55086511800
effective search space used: 55086511800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0226.9