BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0226.8
(518 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP83637.1| katanin [Gossypium hirsutum] 904 0.0
gb|AAP43505.2| katanin-like protein [Gossypium hirsutum] 898 0.0
gb|AAP83638.1| katanin [Gossypium barbadense] 869 0.0
gb|AAN15468.1| CAD ATPase (AAA1) [Arabidopsis thaliana] gi|15220... 865 0.0
dbj|BAB87822.1| katanin [Arabidopsis thaliana] 863 0.0
gb|AAP92128.1| putative ATPase ATP1 [Oryza sativa (japonica cult... 810 0.0
dbj|BAD82149.1| katanin-like [Oryza sativa (japonica cultivar-gr... 555 e-156
ref|NP_999733.1| katanin p60 [Strongylocentrotus purpuratus] gi|... 496 e-139
ref|XP_419665.1| PREDICTED: similar to katanin p60 subunit A 1 [... 496 e-139
ref|NP_705800.1| katanin p60 subunit A-like 1 [Mus musculus] gi|... 494 e-138
ref|NP_001006957.1| katanin p60 subunit A-like 1 [Rattus norvegi... 494 e-138
ref|XP_543146.1| PREDICTED: similar to katanin p60 subunit A-lik... 490 e-137
ref|XP_417114.1| PREDICTED: similar to katanin p60 subunit A-lik... 490 e-137
emb|CAI13718.1| katanin p60 subunit A-like 1 [Homo sapiens] gi|1... 489 e-137
gb|AAD53310.1| katanin p60 [Xenopus laevis] gi|60390218|sp|Q9PUL... 487 e-136
emb|CAG07322.1| unnamed protein product [Tetraodon nigroviridis] 486 e-136
dbj|BAE02159.1| unnamed protein product [Macaca fascicularis] 483 e-135
ref|NP_001007432.1| hypothetical protein LOC492790 [Danio rerio]... 482 e-134
emb|CAI16431.1| katanin p60 (ATPase-containing) subunit A 1 [Hom... 482 e-134
ref|XP_533445.1| PREDICTED: hypothetical protein XP_533445 [Cani... 481 e-134
>gb|AAP83637.1| katanin [Gossypium hirsutum]
Length = 520
Score = 904 bits (2337), Expect = 0.0
Identities = 458/521 (87%), Positives = 478/521 (90%), Gaps = 4/521 (0%)
Query: 1 MVGSSLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKK 60
MVG+SL GLQ+HLKLAREYALEG YDTSIIFFDGA+AQINKHLN+LDDPL+RSKWMNVKK
Sbjct: 1 MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60
Query: 61 ALSEETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDV 120
ALSEE EVVKQLDAER +FK P GRRP SPPI KSSFVFQPLDEYPTSS PMDDPDV
Sbjct: 61 ALSEEAEVVKQLDAERRSFKEAPNGRRPSSPPIHAKSSFVFQPLDEYPTSSGAPMDDPDV 120
Query: 121 WRPPSRDTS-RRPTRPGQMSTRKS--DGAWARGATPRGGATGRGAKAGATSKVNTGTRAS 177
WRPPSRDTS RRP R GQ RKS DG RG+T R ATGRGAKAGA+S+ NTG R S
Sbjct: 121 WRPPSRDTSTRRPARGGQAGMRKSPQDGISGRGST-RTAATGRGAKAGASSRTNTGVRGS 179
Query: 178 TTGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVA 237
TTGKK SGK K DS DAE+ KSK+SQYEGPDP+LAEMLERDVLET+PGVRW+DVA
Sbjct: 180 TTGKKGTGSGKPSKGDSANGDAEDGKSKRSQYEGPDPDLAEMLERDVLETTPGVRWDDVA 239
Query: 238 GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFN 297
GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFN
Sbjct: 240 GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFN 299
Query: 298 VSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSE 357
VSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGASGEHESSRRVKSE
Sbjct: 300 VSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSE 359
Query: 358 LLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI 417
LLVQVDGV+NT TNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI
Sbjct: 360 LLVQVDGVNNTGTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI 419
Query: 418 RINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD 477
RINLKTVEVA DV+IDEVARRT+GYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD
Sbjct: 420 RINLKTVEVAADVDIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD 479
Query: 478 DISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
+ISKDPVAMCDFEEAL KVQRSVSQADIE+HEKWF EFGSA
Sbjct: 480 EISKDPVAMCDFEEALAKVQRSVSQADIEKHEKWFSEFGSA 520
>gb|AAP43505.2| katanin-like protein [Gossypium hirsutum]
Length = 520
Score = 898 bits (2320), Expect = 0.0
Identities = 455/521 (87%), Positives = 477/521 (91%), Gaps = 4/521 (0%)
Query: 1 MVGSSLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKK 60
MVG+SL GLQ+HLKLAREYALEG YDTSIIFFDGA+AQINKHLN+LDDPL+RSKWMNVKK
Sbjct: 1 MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60
Query: 61 ALSEETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDV 120
ALSEETEVVKQLDAER +FK P GRRP SPPI KSSFVFQPLDEYPTSS PMDDPDV
Sbjct: 61 ALSEETEVVKQLDAERRSFKEAPNGRRPSSPPIHAKSSFVFQPLDEYPTSSGAPMDDPDV 120
Query: 121 WRPPSRDTS-RRPTRPGQMSTRKS--DGAWARGATPRGGATGRGAKAGATSKVNTGTRAS 177
WRPPSRDTS RRP R GQ RKS DG RG T R ATGRGAKAGA+S+ NTG R S
Sbjct: 121 WRPPSRDTSTRRPARGGQAGMRKSPQDGISGRGNT-RTAATGRGAKAGASSRTNTGVRGS 179
Query: 178 TTGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVA 237
TTGKK SGK+ K DS DAE+ K K+SQYEGPDP+LAEMLERDVLET+PGVRW+DVA
Sbjct: 180 TTGKKGTGSGKSSKGDSANGDAEDGKLKRSQYEGPDPDLAEMLERDVLETTPGVRWDDVA 239
Query: 238 GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFN 297
GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMF PPGTGKTLLAKAVATECGTTFFN
Sbjct: 240 GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFDPPGTGKTLLAKAVATECGTTFFN 299
Query: 298 VSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSE 357
VSSATLASKWRGES+RMVRCLFDLARAYAPSTIFIDEIDSLCN+RGASGEHESSRRVKSE
Sbjct: 300 VSSATLASKWRGESKRMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSE 359
Query: 358 LLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI 417
LLVQVDGV+NT TNEDGSRKIV+VLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI
Sbjct: 360 LLVQVDGVNNTGTNEDGSRKIVVVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI 419
Query: 418 RINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD 477
RINLKTVEVA DV+IDEVARRT+GYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD
Sbjct: 420 RINLKTVEVAADVDIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD 479
Query: 478 DISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
+ISKDPVAMCDFEEAL KVQRSVSQADIE+HEKWF EFGSA
Sbjct: 480 EISKDPVAMCDFEEALAKVQRSVSQADIEKHEKWFSEFGSA 520
>gb|AAP83638.1| katanin [Gossypium barbadense]
Length = 521
Score = 869 bits (2245), Expect = 0.0
Identities = 445/522 (85%), Positives = 468/522 (89%), Gaps = 5/522 (0%)
Query: 1 MVGSSLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKK 60
MVG+SL GLQ+HLKLAREYALEG YDTSIIFFDGA+AQINKHLN+LDDPL+RSKWMNVKK
Sbjct: 1 MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60
Query: 61 ALSEETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFV-FQPLDEYPTSSSGPMDDPD 119
ALSEETEVVKQLDAER AFK P G P S + F+ F PLDEYPTSS PMDDPD
Sbjct: 61 ALSEETEVVKQLDAERKAFKEAPNGAAVLLPTRSCQIIFLCFHPLDEYPTSSGAPMDDPD 120
Query: 120 VWRPPSRDTS-RRPTRPGQMSTRKS--DGAWARGATPRGGATGRGAKAGATSKVNTGTRA 176
VWRPPSRDTS RRP R GQ RKS DG RG T R ATGRGAKAGA+S+ NTG R
Sbjct: 121 VWRPPSRDTSTRRPARGGQAGMRKSPQDGISGRGNT-RTAATGRGAKAGASSRTNTGVRG 179
Query: 177 STTGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDV 236
STTGKK SGK+ K DS DAE+ K K+SQYEGPDP+LAEMLERDVLET+PGVRW+DV
Sbjct: 180 STTGKKGTGSGKSSKGDSANGDAEDGKLKRSQYEGPDPDLAEMLERDVLETTPGVRWDDV 239
Query: 237 AGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFF 296
AGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFF
Sbjct: 240 AGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFF 299
Query: 297 NVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKS 356
NVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGASGEHESSRRVKS
Sbjct: 300 NVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKS 359
Query: 357 ELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKEL 416
ELLVQVDGV+NT TNEDGSRKIVMVLAATNFPWDI+EAL +RLEKRIYIPLPNFESRKEL
Sbjct: 360 ELLVQVDGVNNTGTNEDGSRKIVMVLAATNFPWDINEALXKRLEKRIYIPLPNFESRKEL 419
Query: 417 IRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSK 476
IRINLKTVEVA DV+IDEVARRT+GYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSK
Sbjct: 420 IRINLKTVEVAADVDIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSK 479
Query: 477 DDISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
D+ISKDPV MCDFEEAL KVQRSVSQADIE+HEKWF EFGSA
Sbjct: 480 DEISKDPVTMCDFEEALAKVQRSVSQADIEKHEKWFSEFGSA 521
>gb|AAN15468.1| CAD ATPase (AAA1) [Arabidopsis thaliana]
gi|15220118|ref|NP_178151.1| katanin 1 (KTN1)
[Arabidopsis thaliana] gi|16649099|gb|AAL24401.1| CAD
ATPase (AAA1) [Arabidopsis thaliana]
gi|6648606|gb|AAF21247.1| CAD ATPase; AAA1 [Arabidopsis
thaliana] gi|60390221|sp|Q9SEX2|KTNA1_ARATH Katanin p60
ATPase-containing subunit (Katanin p60 subunit) (p60
katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1
protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT
protein) (FRAGILE FIBER 2 protein) (AtAAA1)
gi|14133602|gb|AAK54074.1| katanin 1 [Arabidopsis
thaliana] gi|13958985|gb|AAK51051.1| katanin
[Arabidopsis thaliana] gi|12324979|gb|AAG52435.1| CAD
ATPase (AAA1); 35570-33019 [Arabidopsis thaliana]
Length = 523
Score = 865 bits (2234), Expect = 0.0
Identities = 437/524 (83%), Positives = 468/524 (88%), Gaps = 7/524 (1%)
Query: 1 MVGSS--LGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNV 58
MVGSS L GLQ+HLKLAREYALEG YDTS+IFFDGA+AQINKHLN+LDDPL R+KWMNV
Sbjct: 1 MVGSSNSLAGLQDHLKLAREYALEGSYDTSVIFFDGAIAQINKHLNTLDDPLARTKWMNV 60
Query: 59 KKALSEETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSG-PMDD 117
KKA+ EETEVVKQLDAER AFK P GRR SPPI+TKSSFVFQPLDEYPTSS G PMDD
Sbjct: 61 KKAIMEETEVVKQLDAERRAFKEAPTGRRAASPPINTKSSFVFQPLDEYPTSSGGGPMDD 120
Query: 118 PDVWRPPSRD-TSRRPTRPGQMSTRKS--DGAWARGATPRGGATGRGAKAGATSKVNTGT 174
PDVWRPP+RD TSRRP R GQ TRKS DGAWARG T R G RG + GATSK G
Sbjct: 121 PDVWRPPTRDVTSRRPARAGQTGTRKSPQDGAWARGPTTRTGPASRGGRGGATSKSTAGA 180
Query: 175 RASTTGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWE 234
R+ST GKK G + K+ K +S+ DAE+ KSK+ YEGPD +LA MLERDVL+++PGVRW+
Sbjct: 181 RSSTAGKK-GAASKSNKAESMNGDAEDGKSKRGLYEGPDEDLAAMLERDVLDSTPGVRWD 239
Query: 235 DVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT 294
DVAGL+EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT
Sbjct: 240 DVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT 299
Query: 295 FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRV 354
FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRG SGEHESSRRV
Sbjct: 300 FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRV 359
Query: 355 KSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRK 414
KSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLP+FESRK
Sbjct: 360 KSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRK 419
Query: 415 ELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNM 474
LI INL+TVEVA DVNI++VARRT+GYSGDDLTNVCRDAS+NGMRRKIAGKTRDEIKNM
Sbjct: 420 ALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNM 479
Query: 475 SKDDISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
SKDDIS DPVAMCDFEEA+ KVQ SVS +DIE+HEKW EFGSA
Sbjct: 480 SKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHEKWLSEFGSA 523
>dbj|BAB87822.1| katanin [Arabidopsis thaliana]
Length = 523
Score = 863 bits (2230), Expect = 0.0
Identities = 436/524 (83%), Positives = 468/524 (89%), Gaps = 7/524 (1%)
Query: 1 MVGS--SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNV 58
MVGS SL GLQ+HLKLAREYALEG YDTS+IFFDGA+AQINKHLN+LDDPL R+KWMNV
Sbjct: 1 MVGSNNSLAGLQDHLKLAREYALEGSYDTSVIFFDGAIAQINKHLNTLDDPLARTKWMNV 60
Query: 59 KKALSEETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSG-PMDD 117
KKA+ EETEVVKQLDAER AFK P GRR SPPI+TKSSFVFQPLDEYPTSS G PMDD
Sbjct: 61 KKAIMEETEVVKQLDAERRAFKEAPTGRRAASPPINTKSSFVFQPLDEYPTSSGGGPMDD 120
Query: 118 PDVWRPPSRD-TSRRPTRPGQMSTRKS--DGAWARGATPRGGATGRGAKAGATSKVNTGT 174
PDVWRPP+RD +SRRP R GQ TRKS DGAWARG T R G RG + GATSK G
Sbjct: 121 PDVWRPPTRDVSSRRPARAGQTGTRKSPQDGAWARGPTTRTGPASRGGRGGATSKSTAGA 180
Query: 175 RASTTGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWE 234
R+ST GKK G + K+ K +S+ DAE+ KSK+ YEGPD +LA MLERDVL+++PGVRW+
Sbjct: 181 RSSTAGKK-GAASKSNKAESMNGDAEDGKSKRGLYEGPDEDLAAMLERDVLDSTPGVRWD 239
Query: 235 DVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT 294
DVAGL+EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT
Sbjct: 240 DVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT 299
Query: 295 FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRV 354
FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRG SGEHESSRRV
Sbjct: 300 FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRV 359
Query: 355 KSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRK 414
KSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLP+FESRK
Sbjct: 360 KSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRK 419
Query: 415 ELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNM 474
LI INL+TVEVA DVNI++VARRT+GYSGDDLTNVCRDAS+NGMRRKIAGKTRDEIKNM
Sbjct: 420 ALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNM 479
Query: 475 SKDDISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
SKDDIS DPVAMCDFEEA+ KVQ SVS +DIE+HEKW EFGSA
Sbjct: 480 SKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHEKWLSEFGSA 523
>gb|AAP92128.1| putative ATPase ATP1 [Oryza sativa (japonica cultivar-group)]
gi|34911210|ref|NP_916952.1| putative CAD ATPase [Oryza
sativa (japonica cultivar-group)]
gi|19386661|dbj|BAB86043.1| putative katanin [Oryza
sativa (japonica cultivar-group)]
gi|21644706|dbj|BAC01262.1| putative katanin [Oryza
sativa (japonica cultivar-group)]
Length = 519
Score = 810 bits (2092), Expect = 0.0
Identities = 415/520 (79%), Positives = 449/520 (85%), Gaps = 8/520 (1%)
Query: 4 SSLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALS 63
S+L GLQ+HLKLAR+YALEG YDTSIIFFDGA+AQINKHL +LDD L+R+KW+N KKA+
Sbjct: 3 SALAGLQDHLKLARDYALEGLYDTSIIFFDGAIAQINKHLTTLDDALIRTKWLNCKKAIC 62
Query: 64 EETEVVKQLDAERSAFKNNPIGRRPPSPPI-STKSSFVFQPLDEYPTSSSGPMDDPDVWR 122
+E E+VKQLDA+ AFK P RR SPPI S SFVFQPLDEYPTSS P DDPDVW
Sbjct: 63 DEVEIVKQLDAQLKAFKEAPGARRSSSPPIRSNNKSFVFQPLDEYPTSSPAPFDDPDVWA 122
Query: 123 PPSRDTSRRPTRPGQMSTRKS--DGAWARGATPRGGATGRGAKAGATSKVNTGTRASTTG 180
PP +RRPTR GQ STRKS DGAWARG + + G RGAK SK N+G R+ST
Sbjct: 123 PPRDTPNRRPTR-GQSSTRKSSQDGAWARGPS-KTGTPSRGAKPNG-SKGNSGARSSTAS 179
Query: 181 KKSGVSGKAG--KTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAG 238
G GK+ K DSV SDAEE KSKK QYEGPD +LA MLERDVL+++PGVRW+DVAG
Sbjct: 180 STGGRKGKSSSSKADSVSSDAEEGKSKKGQYEGPDMDLAAMLERDVLDSTPGVRWDDVAG 239
Query: 239 LTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV 298
L+EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV
Sbjct: 240 LSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV 299
Query: 299 SSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSEL 358
SSATLASKWRGESERMVRCLFDLAR YAPSTIFIDEIDSLC SRGASGEHESSRRVKSEL
Sbjct: 300 SSATLASKWRGESERMVRCLFDLARFYAPSTIFIDEIDSLCTSRGASGEHESSRRVKSEL 359
Query: 359 LVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIR 418
LVQ+DGV+N++T EDG KIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRK LI
Sbjct: 360 LVQIDGVNNSSTTEDGQPKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKALIN 419
Query: 419 INLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDD 478
INLKTVEVA DV+IDEVARRT+GYSGDDLTNVCRDAS+NGMRRKIAGKTRDEIKNMSKD+
Sbjct: 420 INLKTVEVATDVDIDEVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDE 479
Query: 479 ISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
ISKDPVAMCDFEEAL KVQ+SVS ADIE+HEKW EFGSA
Sbjct: 480 ISKDPVAMCDFEEALAKVQKSVSPADIEKHEKWQAEFGSA 519
>dbj|BAD82149.1| katanin-like [Oryza sativa (japonica cultivar-group)]
gi|56202307|dbj|BAD73766.1| katanin-like [Oryza sativa
(japonica cultivar-group)]
Length = 305
Score = 555 bits (1431), Expect = e-156
Identities = 275/304 (90%), Positives = 291/304 (95%)
Query: 215 ELAEMLERDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFG 274
+LA MLERDVL+++PGVRW+DVAGL+EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFG
Sbjct: 2 DLAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFG 61
Query: 275 PPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDE 334
PPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLAR YAPSTIFIDE
Sbjct: 62 PPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARFYAPSTIFIDE 121
Query: 335 IDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEA 394
IDSLC SRGASGEHESSRRVKSELLVQ+DGV+N++T EDG KIVMVLAATNFPWDIDEA
Sbjct: 122 IDSLCTSRGASGEHESSRRVKSELLVQIDGVNNSSTTEDGQPKIVMVLAATNFPWDIDEA 181
Query: 395 LRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDA 454
LRRRLEKRIYIPLPNFESRK LI INLKTVEVA DV+IDEVARRT+GYSGDDLTNVCRDA
Sbjct: 182 LRRRLEKRIYIPLPNFESRKALININLKTVEVATDVDIDEVARRTEGYSGDDLTNVCRDA 241
Query: 455 SLNGMRRKIAGKTRDEIKNMSKDDISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHE 514
S+NGMRRKIAGKTRDEIKNMSKD+ISKDPVAMCDFEEAL KVQ+SVS ADIE+HEKW E
Sbjct: 242 SMNGMRRKIAGKTRDEIKNMSKDEISKDPVAMCDFEEALAKVQKSVSPADIEKHEKWQAE 301
Query: 515 FGSA 518
FGSA
Sbjct: 302 FGSA 305
>ref|NP_999733.1| katanin p60 [Strongylocentrotus purpuratus]
gi|3098603|gb|AAC15706.1| katanin p60 subunit
[Strongylocentrotus purpuratus]
gi|60390159|sp|O61577|KTNA1_STRPU Katanin p60
ATPase-containing subunit (Katanin p60 subunit) (p60
katanin)
Length = 516
Score = 496 bits (1278), Expect = e-139
Identities = 263/521 (50%), Positives = 346/521 (65%), Gaps = 15/521 (2%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
S+ + E+ K+ REYAL G Y+TS++++ G + QI K L S+ +P + +W +++ LS+
Sbjct: 2 SVDEICENTKMGREYALLGNYETSLVYYQGVLQQIQKLLTSVHEPQRKHQWQTIRQELSQ 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDVWRPP 124
E E VK + + FK+ P P P + F P ++ P DPDVW PP
Sbjct: 62 EYEHVKNITKTLNGFKSEPAAPEPA--PNHRAAPFSHHQHAAKPAAAE-PARDPDVWPPP 118
Query: 125 SRDTSRRPTRPGQMSTRKSDGAWARGATPRGGATGRGAKAGATSKVNTGTRASTTGKKSG 184
+ RP+ P Q + RK + + P A G + G G S G + G
Sbjct: 119 T-PVDHRPSPPYQRAARKDPPRRSEPSKPANRAPGND-RGGRGPSDRRGDARSGGGGRGG 176
Query: 185 VSG------KAGKTDS--VISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDV 236
G + GK+D EE KK G D +L E LERD+++ +P V W D+
Sbjct: 177 ARGSDKDKNRGGKSDKDKKAPSGEEGDEKKFDPAGYDKDLVENLERDIVQRNPNVHWADI 236
Query: 237 AGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFF 296
AGLTEAKRLLEEAVVLPLWMP+YF+GIRRPWKGVLM GPPGTGKT+LAKAVATECGTTFF
Sbjct: 237 AGLTEAKRLLEEAVVLPLWMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFF 296
Query: 297 NVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKS 356
NVSSA+L SK+ GESE++VR LF++AR YAPSTIFIDEIDS+C+ RG EHE+SRRVKS
Sbjct: 297 NVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTGSEHEASRRVKS 356
Query: 357 ELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKEL 416
ELL+Q+DGVS + E+ S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP + R++L
Sbjct: 357 ELLIQMDGVSGPSAGEESS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPEIDGREQL 415
Query: 417 IRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSK 476
+RINLK V +A D+++ +A + DGYSG D+TNVCRDAS+ MRR+I G +EI+++ K
Sbjct: 416 LRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMRRRIQGLRPEEIRHIPK 475
Query: 477 DDISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGS 517
+++++ P DF AL KV +SV + D+ ++ W EFGS
Sbjct: 476 EELNQ-PSTPADFLLALQKVSKSVGKEDLVKYMAWMEEFGS 515
>ref|XP_419665.1| PREDICTED: similar to katanin p60 subunit A 1 [Gallus gallus]
Length = 691
Score = 496 bits (1277), Expect = e-139
Identities = 271/519 (52%), Positives = 356/519 (68%), Gaps = 27/519 (5%)
Query: 1 MVGSSLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKK 60
M+ SL + E++KLAREYAL G YD++++++ G + Q+NK+L SL D L+ KW V +
Sbjct: 197 MLNMSLVMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSLRDTYLQQKWQQVWQ 256
Query: 61 ALSEETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDV 120
+S E + VK + +FK + +PP +++ P D +V
Sbjct: 257 EISVEAKHVKDIMKMLESFKIDS------TPPKASQQEL--------------PAHDAEV 296
Query: 121 WRPPSRDTSRRPTRPGQMSTRKSDGAWARGATPRGGATGRGAKAGATSKVNTGTRASTTG 180
W P RRP+ PG + + + RG R A RG ++ N +A
Sbjct: 297 WSLPV-PAERRPS-PGPRKRQSAQYSDCRGHNNRISAAVRGPHRPSSRNPNDKGKAVRGR 354
Query: 181 KKSGVS--GKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAG 238
+K GK K+ S S+ ES+ KK G D +L E LERD++ +P +RW+D+A
Sbjct: 355 EKKDQQNKGKEEKSKST-SEISESEPKKFDSTGYDKDLVEALERDIISQNPNIRWDDIAD 413
Query: 239 LTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV 298
L EAK+LL+EAVVLP+WMPE+F+GIRRPWKGVLM GPPGTGKTLLAKAVATEC TTFFNV
Sbjct: 414 LVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNV 473
Query: 299 SSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSEL 358
SS+TL SK+RGESE++VR LF++AR YAP+TIFIDEIDS+C+ RG S EHE+SRRVK+EL
Sbjct: 474 SSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAEL 533
Query: 359 LVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIR 418
LVQ+DGV N+D S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP+ + R+EL+R
Sbjct: 534 LVQMDGVGGATENDDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLR 592
Query: 419 INLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDD 478
INL+ +E+A DV++ +A + +GYSG D+TNVCRDASL MRR+I G T +EI+N+S+D+
Sbjct: 593 INLRELELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDE 652
Query: 479 ISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGS 517
+ P M DFE AL KV +SVS ADIE++EKW EFGS
Sbjct: 653 MHM-PTTMEDFEIALKKVSKSVSAADIEKYEKWIVEFGS 690
>ref|NP_705800.1| katanin p60 subunit A-like 1 [Mus musculus]
gi|20987888|gb|AAH30434.1| Katanin p60 subunit A-like 1
[Mus musculus] gi|60390206|sp|Q8K0T4|KATL1_MOUSE Katanin
p60 ATPase-containing subunit A-like 1 (Katanin p60
subunit A-like 1) (p60 katanin-like 1)
Length = 488
Score = 494 bits (1271), Expect = e-138
Identities = 265/519 (51%), Positives = 348/519 (66%), Gaps = 37/519 (7%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
+L + E+ K REYAL G YD+S++++ G + QI +H SL DP ++KW V++ L E
Sbjct: 2 NLAEICENAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSLRDPATKAKWQQVRQELLE 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDVWRPP 124
E E VK + + +FK + +PP P+S + P DP VW PP
Sbjct: 62 EYEQVKSIVSTLESFKMD----KPPDFPVSCRDE---------------PFRDPAVWPPP 102
Query: 125 SRDTSRRPT---RPGQ--MSTRKSDGAWARGATPRGGATGRGAKAGATSKVNTGTRASTT 179
R P RP + RK GA ARG R + K + K
Sbjct: 103 VPAEHRAPPQIRRPNREVRPLRKDVGAGARGLVGRAHQISKSDKPASRDK---------D 153
Query: 180 GKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAGL 239
+ G KA K +V A +S+ K G D +L E LERD++ +P + W+D+A L
Sbjct: 154 YRARGRDDKARK--NVQDGASDSEIPKFDGAGYDKDLVEALERDIVSRNPSIHWDDIADL 211
Query: 240 TEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS 299
EAK+LL EAVVLP+WMP++F+GIRRPWKGVLM GPPGTGKT+LAKAVATECGTTFFNVS
Sbjct: 212 EEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVS 271
Query: 300 SATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELL 359
S+TL SK+RGESE++VR LF++AR YAP+TIFIDEIDS+C+ RG S EHE+SRRVKSELL
Sbjct: 272 SSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELL 331
Query: 360 VQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRI 419
+Q+DGV N+D S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP + R EL++I
Sbjct: 332 IQMDGVGGALENDDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKI 390
Query: 420 NLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDI 479
+L+ VE+ PDV+++++A +T+GYSG D+TN+CRDASL MRR+I G + +EI+ +SK+++
Sbjct: 391 SLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGLSPEEIRALSKEEL 450
Query: 480 SKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
PV D E AL K+ +SVS AD+E++EKW EFGSA
Sbjct: 451 QM-PVTRGDLELALKKIAKSVSAADLEKYEKWMVEFGSA 488
>ref|NP_001006957.1| katanin p60 subunit A-like 1 [Rattus norvegicus]
gi|53733477|gb|AAH83673.1| Katanin p60 subunit A-like 1
[Rattus norvegicus] gi|60389845|sp|Q5XIK7|KATL1_RAT
Katanin p60 ATPase-containing subunit A-like 1 (Katanin
p60 subunit A-like 1) (p60 katanin-like 1)
Length = 488
Score = 494 bits (1271), Expect = e-138
Identities = 261/520 (50%), Positives = 349/520 (66%), Gaps = 39/520 (7%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
+L + E+ K REYAL G YD+S++++ G + QI +H SL DP ++KW V++ L E
Sbjct: 2 NLAEICENAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSLRDPATKAKWQQVRQELLE 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDVWRPP 124
E E VK + + +FK + +PP P+S + P DP VW PP
Sbjct: 62 EYEQVKSIVSTLESFKMD----KPPDFPVSCRDE---------------PFRDPAVWPPP 102
Query: 125 SRDTSRRPT---RPGQ--MSTRKSDGAWARGATPRGGATGRGAKAGATSKVNTGTRASTT 179
R P RP + RK GA ARG G +++ +A++
Sbjct: 103 VPAEHRAPPQIRRPNREVRPLRKDMGAGARGLV------------GRAHQISKSDKAASR 150
Query: 180 GKKSGVSGKAGKTDSVISD-AEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAG 238
K G+ K + D A + + K G D +L E LERD++ +P + W+D+A
Sbjct: 151 DKDYRARGRDDKARKNMQDGASDGEIPKFDGAGYDKDLVEALERDIVSRNPSIHWDDIAD 210
Query: 239 LTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV 298
L EAK+LL EAVVLP+WMP++F+GIRRPWKGVLM GPPGTGKT+LAKAVATECGTTFFNV
Sbjct: 211 LEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNV 270
Query: 299 SSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSEL 358
SS+TL SK+RGESE++VR LF++AR YAP+TIFIDEIDS+C+ RG S EHE+SRRVKSEL
Sbjct: 271 SSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSEL 330
Query: 359 LVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIR 418
L+Q+DGV N+D S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP + R EL++
Sbjct: 331 LIQMDGVGGALENDDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLK 389
Query: 419 INLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDD 478
I+L+ VE+ PD++++++A +T+GYSG D+TN+CRDASL MRR+I G + +EI+ +SK++
Sbjct: 390 ISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGLSPEEIRALSKEE 449
Query: 479 ISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
+ PV D E AL K+ +SVS AD+E++EKW EFGSA
Sbjct: 450 LQM-PVTRGDLELALKKIAKSVSAADLEKYEKWMVEFGSA 488
>ref|XP_543146.1| PREDICTED: similar to katanin p60 subunit A-like 1 [Canis
familiaris]
Length = 582
Score = 490 bits (1262), Expect = e-137
Identities = 259/521 (49%), Positives = 345/521 (65%), Gaps = 39/521 (7%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
+L + ++ K REYAL G YD+S++++ G + QI +H S+ DP ++ KW V++ L E
Sbjct: 94 NLAEICDNAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSVRDPAVKGKWQQVRQELLE 153
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDVWRPP 124
E E VK + + +FK + +PP P+S + P DP VW PP
Sbjct: 154 EYEQVKNIVSTLESFKMD----KPPDFPVSCQDE---------------PFRDPAVWPPP 194
Query: 125 ------SRDTSRRPTRPGQMSTRKSDGAWARGATPRGGATGRGAKAGATSKVNTGTRA-S 177
+ RRP R + ++ G ARG R +G K + + R
Sbjct: 195 VPAEHRAPPQIRRPNREVRPLRKEMPGVGARGPVGRAHPISKGEKPSTSRDKDYRARGRD 254
Query: 178 TTGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVA 237
G+K+ G A + + K G D +L E LERD++ +P + W+D+A
Sbjct: 255 DKGRKNMHDG-----------ASDGEIPKFDGAGYDKDLVEALERDIVSRNPSIHWDDIA 303
Query: 238 GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFN 297
L EAK+LL EAVVLP+WMP++F+GIRRPWKGVLM GPPGTGKT+LAKAVATECGTTFFN
Sbjct: 304 DLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFN 363
Query: 298 VSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSE 357
VSS+TL SK+RGESE++VR LF++AR YAP+TIFIDEIDS+C+ RG S EHE+SRRVKSE
Sbjct: 364 VSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSE 423
Query: 358 LLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI 417
LL+Q+DGV N+D S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP + R EL+
Sbjct: 424 LLIQMDGVGGALENDDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRTELL 482
Query: 418 RINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD 477
+INL+ VE+ PD+ ++++A + +GYSG D+TNVCRDASL MRR+I G +EI+ +SK+
Sbjct: 483 KINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLGPEEIRALSKE 542
Query: 478 DISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
++ PV DFE AL K+ +SVS AD+E++EKW EFGSA
Sbjct: 543 ELQM-PVTKGDFELALKKIAKSVSAADLEKYEKWMVEFGSA 582
>ref|XP_417114.1| PREDICTED: similar to katanin p60 subunit A-like 1 [Gallus gallus]
Length = 489
Score = 490 bits (1261), Expect = e-137
Identities = 264/521 (50%), Positives = 344/521 (65%), Gaps = 40/521 (7%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
+L + ++ K R+YAL G YD+S++++ G + QI +H S+ DP ++ KW V++ L E
Sbjct: 2 NLAEICDNAKKGRDYALIGNYDSSMVYYQGVIQQIQRHCQSIRDPAIKGKWQQVRQELVE 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDVWRPP 124
E E VK + +FK + RP P+S + P DP VW PP
Sbjct: 62 EYEQVKSIVDTLESFKMD----RPADIPVSYQDE---------------PFRDPAVWPPP 102
Query: 125 SRDTSR------RPTRPGQMSTRKSDGAWARGATPRGGATGRGAK-AGATSKVNTGTRAS 177
R RP R + ++S G RG R R K AG+ +
Sbjct: 103 VPAEHRAPPQIKRPNRGAKPLRKESPGLQPRGPVGRAQPAVRSDKPAGSRDREPRARGRD 162
Query: 178 TTGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVA 237
GKK G A D V+ + G D +L E LERD++ +P + W+D+A
Sbjct: 163 DKGKKIPQEGVA---DDVL---------RFDGAGYDKDLVEALERDIVSRNPSIHWDDIA 210
Query: 238 GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFN 297
L EAK+LL EAVVLP+WMP++F+GIRRPWKGVLM GPPGTGKT+LAKAVATECGTTFFN
Sbjct: 211 DLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFN 270
Query: 298 VSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSE 357
VSS+TL SK+RGESE++VR LF++AR YAP+TIFIDEIDS+C+ RG S EHE+SRRVKSE
Sbjct: 271 VSSSTLTSKYRGESEKLVRLLFEMARFYAPATIFIDEIDSICSRRGTSDEHEASRRVKSE 330
Query: 358 LLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI 417
LLVQ+DGV N+D S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP + R EL+
Sbjct: 331 LLVQMDGVGGALENDDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELL 389
Query: 418 RINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD 477
+INL+ VE+ PD++++E+A + +GYSG D+TNVCRDASL MRR+I G T +EI+ +SK+
Sbjct: 390 KINLREVELDPDISLEEIAEKIEGYSGADITNVCRDASLMAMRRRINGLTPEEIRALSKE 449
Query: 478 DISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
++ PV DFE AL K+ +SVS AD+E++EKW EFGSA
Sbjct: 450 ELQM-PVTKGDFELALKKISKSVSAADLEKYEKWMAEFGSA 489
>emb|CAI13718.1| katanin p60 subunit A-like 1 [Homo sapiens]
gi|12653659|gb|AAH00612.1| Katanin p60 subunit A-like 1
[Homo sapiens] gi|60390214|sp|Q9BW62|KATL1_HUMAN Katanin
p60 ATPase-containing subunit A-like 1 (Katanin p60
subunit A-like 1) (p60 katanin-like 1)
gi|14149767|ref|NP_115492.1| katanin p60 subunit A-like
1 [Homo sapiens] gi|62177112|ref|NP_001014402.1| katanin
p60 subunit A-like 1 [Homo sapiens]
Length = 490
Score = 489 bits (1259), Expect = e-137
Identities = 260/520 (50%), Positives = 345/520 (66%), Gaps = 37/520 (7%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
+L + ++ K REYAL G YD+S++++ G + QI +H S+ DP ++ KW V++ L E
Sbjct: 2 NLAEICDNAKKGREYALLGNYDSSMVYYQGVMQQIQRHCQSVRDPAIKGKWQQVRQELLE 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDVWRPP 124
E E VK + + +FK + +PP P+S + P DP VW PP
Sbjct: 62 EYEQVKSIVSTLESFKID----KPPDFPVSCQDE---------------PFRDPAVWPPP 102
Query: 125 ------SRDTSRRPTRPGQMSTRKSDGAWARGATPRGGATGRGAKAGATSKVNTGTRAST 178
+ RRP R + ++ G ARG GR + K +T
Sbjct: 103 VPAEHRAPPQIRRPNREVRPLRKEMAGVGARGPV------GRAHPISKSEKPSTSRDKDY 156
Query: 179 TGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAG 238
+ G+ D SD E K + Y D +L E LERD++ +P + W+D+A
Sbjct: 157 RARGRDDKGRKNMQDGA-SDGEMPKFDGAGY---DKDLVEALERDIVSRNPSIHWDDIAD 212
Query: 239 LTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV 298
L EAK+LL EAVVLP+WMP++F+GIRRPWKGVLM GPPGTGKT+LAKAVATECGTTFFNV
Sbjct: 213 LEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNV 272
Query: 299 SSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSEL 358
SS+TL SK+RGESE++VR LF++AR YAP+TIFIDEIDS+C+ RG S EHE+SRRVKSEL
Sbjct: 273 SSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSEL 332
Query: 359 LVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIR 418
L+Q+DGV N+D S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP + R EL++
Sbjct: 333 LIQMDGVGGALENDDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLK 391
Query: 419 INLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDD 478
INL+ VE+ PD+ ++++A + +GYSG D+TNVCRDASL MRR+I G + +EI+ +SK++
Sbjct: 392 INLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEE 451
Query: 479 ISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
+ PV DFE AL K+ +SVS AD+E++EKW EFGSA
Sbjct: 452 LQM-PVTKGDFELALKKIAKSVSAADLEKYEKWMVEFGSA 490
>gb|AAD53310.1| katanin p60 [Xenopus laevis] gi|60390218|sp|Q9PUL2|KTNA1_XENLA
Katanin p60 ATPase-containing subunit (Katanin p60
subunit) (p60 katanin)
Length = 486
Score = 487 bits (1253), Expect = e-136
Identities = 265/517 (51%), Positives = 347/517 (66%), Gaps = 37/517 (7%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
SL + E++KLAREYAL G YD++++++ G + Q+NK+L S+ D L+ KW V + ++
Sbjct: 2 SLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTFLQQKWQQVWQEINM 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDVWRPP 124
E + VK + + FK + S P+ T T P D +VW P
Sbjct: 62 ECKHVKDIMSTLEGFKLD-------SSPVKT-------------TQHEFPSHDGEVWSLP 101
Query: 125 SRDTSRRPTRPGQMSTRKSDGAWARGATPRGGATGRGAKAGATSKVNTGTRASTTGKKSG 184
RRP+ PG + + R A +G + N ++
Sbjct: 102 V-PVERRPS-PGPRKRQSVQCNDNKSHNNRFSAAAKGPNLPSARNANNVKMKPVRARE-- 157
Query: 185 VSGKAGKTDSVI-----SDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAGL 239
K D++I +D E++ K+ G D +L E LERD++ +P +RW+D+A L
Sbjct: 158 ------KKDALIKNKSSADVSETEVKRFDGSGYDKDLIEALERDIISQNPNIRWDDIADL 211
Query: 240 TEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS 299
EAK+LL+EAVVLP+WMPE+F+GIRRPWKGVLM GPPGTGKTLLAKAVATEC TTFFN+S
Sbjct: 212 EEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNIS 271
Query: 300 SATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELL 359
S+TL SK+RGESE++VR LF++AR YAP+TIFIDEIDS+C+ RG S EHE+SRRVK+ELL
Sbjct: 272 SSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELL 331
Query: 360 VQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRI 419
VQ+DGV + NED S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP+ + R+EL+RI
Sbjct: 332 VQMDGVGGASENEDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRI 390
Query: 420 NLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDI 479
NLK +E+A DVNI+ +A DGYSG D+TNVCRDASL MRR+I G T +EI+N+S+DD+
Sbjct: 391 NLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDM 450
Query: 480 SKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFG 516
P M DFE AL KV +SVS +DIE++EKW EFG
Sbjct: 451 HM-PTTMEDFEMALKKVSKSVSASDIEKYEKWIFEFG 486
>emb|CAG07322.1| unnamed protein product [Tetraodon nigroviridis]
Length = 486
Score = 486 bits (1251), Expect = e-136
Identities = 263/519 (50%), Positives = 345/519 (65%), Gaps = 41/519 (7%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
+L + ++ K AREYAL G YD+SI++++G + QI K+ +SL DP ++ KW +++ L++
Sbjct: 2 NLAEICDYAKKAREYALLGIYDSSIVYYEGVLQQIQKYCHSLRDPAVKVKWQQMRQELTK 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSGPMDDPDVWRPP 124
E E VK + +FKN +P D +DP VW PP
Sbjct: 62 EYEQVKTITGTLESFKNE-------------------RPSDILAPQCERSPEDPVVWPPP 102
Query: 125 SRDTSRRPTRPGQMST------RKSDGAWARGATPRGGATGRGAKAGATSKVNTGTRAST 178
R P + ST R S G RGA RG + + G K G RA
Sbjct: 103 VPAEHRNPVPLKRPSTGVKQQRRDSPGLQHRGAGARGQTNAKAERPGL--KDARGVRAKD 160
Query: 179 TGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAG 238
K G S + + + KK G D +L ++LERD++ +P V W+D+A
Sbjct: 161 EKGKKGAS-----------EPGDGELKKFDGAGHDSDLVDLLERDIVSRNPNVHWDDIAD 209
Query: 239 LTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV 298
L +AK+LL EAVVLP+WMP++F+GIRRPWKGVLM GPPGTGKT+LAKAVATECGTTFFNV
Sbjct: 210 LEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNV 269
Query: 299 SSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSEL 358
SS+TL SK+RGESE++VR LF++AR YAP+TIFIDEIDS+C+ RG S EHE+SRRVKSE
Sbjct: 270 SSSTLTSKYRGESEKLVRVLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSEF 329
Query: 359 LVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIR 418
LVQ+DG+ NT +ED S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP+ R EL++
Sbjct: 330 LVQMDGMGNT-PDEDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSASGRAELLK 387
Query: 419 INLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDD 478
INLK VEVA DV+++ +A + +GYSG D+TNVCRDAS+ MRR+I G + ++I+ +SKD+
Sbjct: 388 INLKEVEVAEDVDLNVIAEKMEGYSGADITNVCRDASMMAMRRRIQGLSPEQIRALSKDE 447
Query: 479 ISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGS 517
+ PV M DF AL K+ +SVS AD+E++E W EFGS
Sbjct: 448 LQM-PVTMEDFTIALKKISKSVSAADLEKYEAWMAEFGS 485
>dbj|BAE02159.1| unnamed protein product [Macaca fascicularis]
Length = 491
Score = 483 bits (1243), Expect = e-135
Identities = 265/517 (51%), Positives = 350/517 (67%), Gaps = 32/517 (6%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
SL + E++KLAREYAL G YD++++++ G + Q+NK+L S+ D L+ KW V + ++
Sbjct: 2 SLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEINV 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSG---PMDDPDVW 121
E + VK + +FK LD P ++ P + +VW
Sbjct: 62 EAKHVKDIMKTLESFK-----------------------LDSTPLKAAQHDLPASEGEVW 98
Query: 122 RPPSRDTSRRPTRPGQMSTRKSDGAWARGATPRGGATGRGAKAGATSKVNT-GTRASTTG 180
P RRP+ PG + S + ++ R G T R ++ A + N G
Sbjct: 99 SMPV-PVERRPS-PGPRKRQSSQYSDSKSHGNRPGTTVRVHRSSAQNLHNDRGKAVRCRE 156
Query: 181 KKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAGLT 240
KK G+ K S + E ++ K G D +L E LERD++ +P VRW+D+A L
Sbjct: 157 KKEQNKGREEKNKSPAA-VTEPETNKFDSTGYDKDLVEALERDIISQNPNVRWDDIADLV 215
Query: 241 EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSS 300
EAK+LL+EAVVLP+WMPE+F+GIRRPWKGVLM GPPGTGKTLLAKAVATEC TTFFNVSS
Sbjct: 216 EAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSS 275
Query: 301 ATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLV 360
+TL SK+RGESE++VR LF++AR Y+P+TIFIDEIDS+C+ RG S EHE+SRRVK+ELLV
Sbjct: 276 STLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLV 335
Query: 361 QVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRIN 420
Q+DGV + N+D S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP+ + R+EL+RI+
Sbjct: 336 QMDGVGGASENDDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRIS 394
Query: 421 LKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDIS 480
L+ +E+A DV++ +A +GYSG D+TNVCRDASL MRR+I G T +EI+N+SK+++
Sbjct: 395 LRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMH 454
Query: 481 KDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGS 517
P M DFE AL KV +SVS ADIER+EKW EFGS
Sbjct: 455 M-PTTMEDFEMALKKVSKSVSAADIERYEKWIFEFGS 490
>ref|NP_001007432.1| hypothetical protein LOC492790 [Danio rerio]
gi|55250013|gb|AAH85416.1| Zgc:101696 [Danio rerio]
Length = 488
Score = 482 bits (1241), Expect = e-134
Identities = 263/515 (51%), Positives = 344/515 (66%), Gaps = 43/515 (8%)
Query: 11 EHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSEETEVVK 70
++ K REYAL G YD+S++++ G + QI+KH SL DP + KW V++ L+EE E VK
Sbjct: 8 DNAKKGREYALLGNYDSSMVYYQGVIQQIHKHCQSLRDPAQKVKWQQVRQELAEEYEQVK 67
Query: 71 QLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTS--SSGPMDDPDVWRPPSRDT 128
+ +ST SF ++P GP D PDVW PP+
Sbjct: 68 SI--------------------VSTLESFKVDKAVDFPNPVPEEGPRD-PDVWPPPTPAE 106
Query: 129 SRRPT---RPGQMST---RKSDGAWARGATPRGGATGRGAKAGATSKVNTGTRASTTGKK 182
R P +P +S ++S G RGA RG A + + ++ G +A +K
Sbjct: 107 HRGPVQVKKPVPLSKPQRKESPGMQHRGAVGRGQANIKPDRPN--TRDGRGNKAKE--EK 162
Query: 183 SGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAGLTEA 242
S + + G D + KK G D +L + LERD++ +P + W+D+A L +A
Sbjct: 163 SKRNAQEGAADV--------EQKKFDGTGYDSDLVDALERDIVSRNPNIHWDDIADLEDA 214
Query: 243 KRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSAT 302
K+LL EAVVLP+WMP++F+GIRRPWKGVLM GPPGTGKT+LAKAVATECGTTFFNVSS+T
Sbjct: 215 KKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSST 274
Query: 303 LASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQV 362
L SK+RGESE++VR LF++AR YAP+TIFIDEIDS+C RG S EHE+SRRVKSELLVQ+
Sbjct: 275 LTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQM 334
Query: 363 DGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLK 422
DGV +ED S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP + R EL++INL+
Sbjct: 335 DGVGGAQESEDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLR 393
Query: 423 TVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDISKD 482
V+VA DV++ A + +GYSG D+TNVCRDAS+ MRR+I G + +EI+ +SKD++
Sbjct: 394 EVDVASDVDLTVFAEKIEGYSGADITNVCRDASMMAMRRRIQGLSPEEIRALSKDELQM- 452
Query: 483 PVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGS 517
PV M DFE AL K+ +SVS AD+E++E W EFGS
Sbjct: 453 PVTMEDFELALKKISKSVSAADLEKYESWMSEFGS 487
>emb|CAI16431.1| katanin p60 (ATPase-containing) subunit A 1 [Homo sapiens]
gi|56417804|emb|CAI19505.1| katanin p60
(ATPase-containing) subunit A 1 [Homo sapiens]
gi|60390161|sp|O75449|KTNA1_HUMAN Katanin p60
ATPase-containing subunit A1 (Katanin p60 subunit A1)
(p60 katanin) gi|3283072|gb|AAC25114.1| p60 katanin
[Homo sapiens] gi|5901990|ref|NP_008975.1| katanin p60
subunit A 1 [Homo sapiens]
Length = 491
Score = 482 bits (1240), Expect = e-134
Identities = 265/517 (51%), Positives = 349/517 (67%), Gaps = 32/517 (6%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
SL + E++KLAREYAL G YD++++++ G + Q+NK+L S+ D L+ KW V + ++
Sbjct: 2 SLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEINV 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSG---PMDDPDVW 121
E + VK + +FK LD P ++ P + +VW
Sbjct: 62 EAKHVKDIMKTLESFK-----------------------LDSTPLKAAQHDLPASEGEVW 98
Query: 122 RPPSRDTSRRPTRPGQMSTRKSDGAWARGATPRGGATGRGAKAGATSKVNT-GTRASTTG 180
P RRP+ PG + S + + R T R ++ A + N G
Sbjct: 99 SMPV-PVERRPS-PGPRKRQSSQYSDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCRE 156
Query: 181 KKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAGLT 240
KK G+ K S + E ++ K G D +L E LERD++ +P VRW+D+A L
Sbjct: 157 KKEQNKGREEKNKSPAA-VTEPETNKFDSTGYDKDLVEALERDIISQNPNVRWDDIADLV 215
Query: 241 EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSS 300
EAK+LL+EAVVLP+WMPE+F+GIRRPWKGVLM GPPGTGKTLLAKAVATEC TTFFNVSS
Sbjct: 216 EAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSS 275
Query: 301 ATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLV 360
+TL SK+RGESE++VR LF++AR Y+P+TIFIDEIDS+C+ RG S EHE+SRRVK+ELLV
Sbjct: 276 STLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLV 335
Query: 361 QVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRIN 420
Q+DGV T+ N+D S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP+ + R+EL+RI+
Sbjct: 336 QMDGVGGTSENDDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRIS 394
Query: 421 LKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDIS 480
L+ +E+A DV++ +A +GYSG D+TNVCRDASL MRR+I G T +EI+N+SK+++
Sbjct: 395 LRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMH 454
Query: 481 KDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGS 517
P M DFE AL KV +SVS ADIER+EKW EFGS
Sbjct: 455 M-PTTMEDFEMALKKVSKSVSAADIERYEKWIFEFGS 490
>ref|XP_533445.1| PREDICTED: hypothetical protein XP_533445 [Canis familiaris]
Length = 491
Score = 481 bits (1238), Expect = e-134
Identities = 267/520 (51%), Positives = 345/520 (66%), Gaps = 38/520 (7%)
Query: 5 SLGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNVKKALSE 64
SL + E++KLAREYAL G YD++++++ G + Q+NK+L S+ D L+ KW V + ++
Sbjct: 2 SLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEINV 61
Query: 65 ETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSG---PMDDPDVW 121
E + VK + +FK LD P ++ P + +VW
Sbjct: 62 EAKHVKDIMKTLESFK-----------------------LDNTPLKAAQHELPASEGEVW 98
Query: 122 RPPSRDTSRRPTRPGQMSTRKSDGAWARGATPRGGATGRGAKAGATSKVNT----GTRAS 177
P RRP+ PG RK P G G +A +S N G
Sbjct: 99 SLPV-PVERRPS-PGP---RKRQSPQYSDPKPHGNRPGTTVRAHRSSAHNLHNDRGKAVR 153
Query: 178 TTGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVA 237
KK G+ K S + E SK G D +L E LERD++ +P VRW+D+A
Sbjct: 154 CREKKEQNKGREEKNKSPAAVTEPETSKFDS-TGYDKDLVEALERDIISQNPNVRWDDIA 212
Query: 238 GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFN 297
L EAK+LL+EAVVLP+WMPE+F+GIRRPWKGVLM GPPGTGKTLLAKAVATEC TTFFN
Sbjct: 213 DLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFN 272
Query: 298 VSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSE 357
VSS+TL SK+RGESE++VR LF++AR Y+P+TIFIDEIDS+C+ RG S EHE+SRRVK+E
Sbjct: 273 VSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAE 332
Query: 358 LLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI 417
LLVQ+DGV + N+D S K+VMVLAATNFPWDIDEALRRRLEKRIYIPLP+ + R+EL+
Sbjct: 333 LLVQMDGVGGASENDDPS-KMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELL 391
Query: 418 RINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD 477
RI+L+ +E+A DVN+ +A +GYSG D+TNVCRDASL MRR+I G T +EI+N+S++
Sbjct: 392 RISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRE 451
Query: 478 DISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGS 517
++ P M DFE AL KV +SVS ADIER+EKW EFGS
Sbjct: 452 EMHM-PTTMEDFEMALKKVSKSVSAADIERYEKWIFEFGS 490
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 887,499,903
Number of Sequences: 2540612
Number of extensions: 38497756
Number of successful extensions: 150284
Number of sequences better than 10.0: 4645
Number of HSP's better than 10.0 without gapping: 2647
Number of HSP's successfully gapped in prelim test: 2011
Number of HSP's that attempted gapping in prelim test: 139342
Number of HSP's gapped (non-prelim): 6777
length of query: 518
length of database: 863,360,394
effective HSP length: 133
effective length of query: 385
effective length of database: 525,458,998
effective search space: 202301714230
effective search space used: 202301714230
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0226.8