BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0206b.2
(121 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB43602.1| phosphoribosyl pyrophosphate synthase isozyme 4 ... 80 1e-14
ref|XP_467457.1| putative phosphoribosyl pyrophosphate synthetas... 77 1e-13
emb|CAB43553.1| phosphoribosyl diphosphate synthase [Arabidopsis... 77 1e-13
gb|AAN04491.1| phosphoribosyl pyrophosphate synthetase [Saccharu... 77 1e-13
emb|CAB43552.1| phosphoribosyl diphosphate synthase [Arabidopsis... 75 5e-13
emb|CAB43601.1| phosphoribosyl pyrophosphate synthase isozyme 3 ... 75 5e-13
gb|AAL90971.1| At1g10700/F20B24.13 [Arabidopsis thaliana] gi|152... 75 5e-13
gb|AAD31343.1| Strong similarity to gi|4544471 F23E6.11 from Ara... 75 5e-13
gb|AAF17658.1| F20B24.13 [Arabidopsis thaliana] 75 5e-13
ref|NP_916715.1| putative phosphoribosyl pyrophosphate synthase ... 74 8e-13
>emb|CAB43602.1| phosphoribosyl pyrophosphate synthase isozyme 4 [Spinacia oleracea]
gi|62286957|sp|Q9XGA1|KPRS4_SPIOL Ribose-phosphate
pyrophosphokinase 4 (Phosphoribosyl pyrophosphate
synthetase 4)
Length = 318
Score = 79.7 bits (195), Expect = 1e-14
Identities = 44/62 (70%), Positives = 48/62 (76%), Gaps = 1/62 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE-*KEEGDVTTAFTLARML 119
FLA SSP FEQ + IYAL LFVASF LV PFFPTGSFE +EEGDV TAFT+AR+L
Sbjct: 63 FLAAFSSPAVIFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIL 122
Query: 120 SN 121
SN
Sbjct: 123 SN 124
>ref|XP_467457.1| putative phosphoribosyl pyrophosphate synthetase [Oryza sativa
(japonica cultivar-group)] gi|51979348|ref|XP_507525.1|
PREDICTED OJ1479_B12.26 gene product [Oryza sativa
(japonica cultivar-group)] gi|51964304|ref|XP_506937.1|
PREDICTED OJ1479_B12.26 gene product [Oryza sativa
(japonica cultivar-group)] gi|42408023|dbj|BAD09159.1|
putative phosphoribosyl pyrophosphate synthetase [Oryza
sativa (japonica cultivar-group)]
gi|41052884|dbj|BAD07797.1| putative phosphoribosyl
pyrophosphate synthetase [Oryza sativa (japonica
cultivar-group)]
Length = 325
Score = 77.0 bits (188), Expect = 1e-13
Identities = 42/61 (68%), Positives = 48/61 (77%), Gaps = 1/61 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE-*KEEGDVTTAFTLARML 119
FLA SSP+ FEQ + I+AL LF+ASF LV PFFPTGSFE +EEGDV TAFTLAR+L
Sbjct: 69 FLASFSSPSVIFEQISVIFALPKLFIASFTLVLPFFPTGSFERVEEEGDVATAFTLARIL 128
Query: 120 S 120
S
Sbjct: 129 S 129
>emb|CAB43553.1| phosphoribosyl diphosphate synthase [Arabidopsis thaliana]
gi|21593006|gb|AAM64955.1| putative ribose phosphate
pyrophosphokinase [Arabidopsis thaliana]
gi|23197750|gb|AAN15402.1| putative ribose phosphate
pyrophosphokinase [Arabidopsis thaliana]
gi|22136046|gb|AAM91605.1| putative ribose phosphate
pyrophosphokinase [Arabidopsis thaliana]
gi|4512664|gb|AAD21718.1| putative ribose phosphate
pyrophosphokinase [Arabidopsis thaliana]
gi|20197872|gb|AAM15296.1| putative ribose phosphate
pyrophosphokinase [Arabidopsis thaliana]
gi|62286916|sp|Q680A5|KPRS4_ARATH Ribose-phosphate
pyrophosphokinase 4 (Phosphoribosyl pyrophosphate
synthetase 4) gi|15228027|ref|NP_181819.1|
ribose-phosphate pyrophosphokinase 4 / phosphoribosyl
diphosphate synthetase 4 (PRS4) [Arabidopsis thaliana]
Length = 337
Score = 77.0 bits (188), Expect = 1e-13
Identities = 42/62 (67%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE-*KEEGDVTTAFTLARML 119
FLA SSP FEQ + IY L LFVASF LV PFFPTGSFE +EEGDV TAFT+AR++
Sbjct: 82 FLASFSSPAVIFEQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIV 141
Query: 120 SN 121
SN
Sbjct: 142 SN 143
>gb|AAN04491.1| phosphoribosyl pyrophosphate synthetase [Saccharum hybrid cultivar]
Length = 328
Score = 76.6 bits (187), Expect = 1e-13
Identities = 42/61 (68%), Positives = 47/61 (76%), Gaps = 1/61 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE-*KEEGDVTTAFTLARML 119
FLA SSP FEQ + I+AL LF+ASF LV PFFPTGSFE +EEGDV TAFTLAR+L
Sbjct: 72 FLASFSSPAVIFEQISVIFALPKLFIASFTLVLPFFPTGSFERVEEEGDVATAFTLARIL 131
Query: 120 S 120
S
Sbjct: 132 S 132
>emb|CAB43552.1| phosphoribosyl diphosphate synthase [Arabidopsis thaliana]
Length = 326
Score = 74.7 bits (182), Expect = 5e-13
Identities = 42/62 (67%), Positives = 46/62 (73%), Gaps = 1/62 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE*KE-EGDVTTAFTLARML 119
FLA SSP FEQ + IYAL LFV+SF LV PFFPTG+ E E EGDV TAFTLAR+L
Sbjct: 70 FLASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARIL 129
Query: 120 SN 121
SN
Sbjct: 130 SN 131
>emb|CAB43601.1| phosphoribosyl pyrophosphate synthase isozyme 3 [Spinacia oleracea]
gi|62286956|sp|Q9XGA0|KPRS3_SPIOL Ribose-phosphate
pyrophosphokinase 3, mitochondrial precursor
(Phosphoribosyl pyrophosphate synthetase 3)
Length = 406
Score = 74.7 bits (182), Expect = 5e-13
Identities = 43/62 (69%), Positives = 46/62 (73%), Gaps = 1/62 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE*KE-EGDVTTAFTLARML 119
FLA SSP FEQ + IYAL LFVASF LV PFFPTG+ E E EGDV TAFTLAR+L
Sbjct: 150 FLASFSSPGVIFEQLSVIYALPKLFVASFKLVLPFFPTGTSERMEDEGDVATAFTLARIL 209
Query: 120 SN 121
SN
Sbjct: 210 SN 211
>gb|AAL90971.1| At1g10700/F20B24.13 [Arabidopsis thaliana]
gi|15220191|ref|NP_172540.1| ribose-phosphate
pyrophosphokinase 3 / phosphoribosyl diphosphate
synthetase 3 (PRS3) [Arabidopsis thaliana]
gi|16604386|gb|AAL24199.1| At1g10700/F20B24.13
[Arabidopsis thaliana] gi|62286943|sp|Q93Z66|KPRS3_ARATH
Ribose-phosphate pyrophosphokinase 3 (Phosphoribosyl
pyrophosphate synthetase 3)
Length = 411
Score = 74.7 bits (182), Expect = 5e-13
Identities = 42/62 (67%), Positives = 46/62 (73%), Gaps = 1/62 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE*KE-EGDVTTAFTLARML 119
FLA SSP FEQ + IYAL LFV+SF LV PFFPTG+ E E EGDV TAFTLAR+L
Sbjct: 155 FLASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARIL 214
Query: 120 SN 121
SN
Sbjct: 215 SN 216
>gb|AAD31343.1| Strong similarity to gi|4544471 F23E6.11 from Arabidopsis thaliana
BAC gb|AC006580. and is a member of the PF|00492
Phosphoribosyl pyrophosphate synthase family
Length = 421
Score = 74.7 bits (182), Expect = 5e-13
Identities = 42/62 (67%), Positives = 46/62 (73%), Gaps = 1/62 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE*KE-EGDVTTAFTLARML 119
FLA SSP FEQ + IYAL LFV+SF LV PFFPTG+ E E EGDV TAFTLAR+L
Sbjct: 155 FLASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARIL 214
Query: 120 SN 121
SN
Sbjct: 215 SN 216
>gb|AAF17658.1| F20B24.13 [Arabidopsis thaliana]
Length = 459
Score = 74.7 bits (182), Expect = 5e-13
Identities = 42/62 (67%), Positives = 46/62 (73%), Gaps = 1/62 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE*KE-EGDVTTAFTLARML 119
FLA SSP FEQ + IYAL LFV+SF LV PFFPTG+ E E EGDV TAFTLAR+L
Sbjct: 155 FLASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARIL 214
Query: 120 SN 121
SN
Sbjct: 215 SN 216
>ref|NP_916715.1| putative phosphoribosyl pyrophosphate synthase [Oryza sativa
(japonica cultivar-group)] gi|20160549|dbj|BAB89498.1|
putative phosphoribosyl pyrophosphate synthase [Oryza
sativa (japonica cultivar-group)]
Length = 409
Score = 73.9 bits (180), Expect = 8e-13
Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 61 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE*KE-EGDVTTAFTLARML 119
FLA SSP+ FEQ + IYAL LF++SF L+ PFFPTG+ E E EGDV TAFTLAR+L
Sbjct: 153 FLASFSSPSVIFEQLSIIYALPKLFISSFTLILPFFPTGTSERMEDEGDVATAFTLARIL 212
Query: 120 SN 121
SN
Sbjct: 213 SN 214
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.370 0.164 0.657
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,981,258
Number of Sequences: 2540612
Number of extensions: 4740054
Number of successful extensions: 21536
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21516
Number of HSP's gapped (non-prelim): 10
length of query: 121
length of database: 863,360,394
effective HSP length: 97
effective length of query: 24
effective length of database: 616,921,030
effective search space: 14806104720
effective search space used: 14806104720
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.8 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0206b.2