BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0203.9
(529 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB77807.1| hypothetical protein [Arabidopsis thaliana] gi|1... 375 e-102
emb|CAB86077.1| putative protein [Arabidopsis thaliana] gi|11357... 92 5e-17
ref|NP_176127.1| F-box family protein [Arabidopsis thaliana] 91 1e-16
emb|CAB91590.1| putative protein [Arabidopsis thaliana] gi|26450... 87 2e-15
emb|CAB86024.1| putative protein [Arabidopsis thaliana] gi|15241... 82 3e-14
dbj|BAB02857.1| unnamed protein product [Arabidopsis thaliana] 82 4e-14
ref|NP_189482.1| F-box family protein [Arabidopsis thaliana] 82 4e-14
dbj|BAB08761.1| unnamed protein product [Arabidopsis thaliana] g... 78 8e-13
dbj|BAB11270.1| unnamed protein product [Arabidopsis thaliana] g... 77 1e-12
dbj|BAB10659.1| unnamed protein product [Arabidopsis thaliana] g... 76 2e-12
dbj|BAB09899.1| unnamed protein product [Arabidopsis thaliana] g... 76 3e-12
ref|NP_190473.2| F-box family protein [Arabidopsis thaliana] 75 4e-12
gb|AAR24665.1| At1g52650 [Arabidopsis thaliana] gi|15219051|ref|... 74 9e-12
ref|NP_919076.1| putative RNA apurinic site specific lyase [Oryz... 74 9e-12
emb|CAB91589.1| putative protein [Arabidopsis thaliana] gi|11357... 74 9e-12
dbj|BAD43375.1| F6D8.13 [Arabidopsis thaliana] 74 9e-12
ref|NP_910190.1| putative RNA apurinic site specific lyase [Oryz... 74 1e-11
emb|CAB91591.1| putative protein [Arabidopsis thaliana] gi|11357... 74 1e-11
dbj|BAC43598.1| unknown protein [Arabidopsis thaliana] gi|306949... 74 1e-11
dbj|BAB11672.1| unnamed protein product [Arabidopsis thaliana] 74 1e-11
>emb|CAB77807.1| hypothetical protein [Arabidopsis thaliana]
gi|15236266|ref|NP_192231.1| F-box family protein
[Arabidopsis thaliana] gi|4262150|gb|AAD14450.1|
hypothetical protein [Arabidopsis thaliana]
gi|25407174|pir||H85040 hypothetical protein AT4g03220
[imported] - Arabidopsis thaliana
Length = 498
Score = 375 bits (962), Expect = e-102
Identities = 231/538 (42%), Positives = 329/538 (60%), Gaps = 51/538 (9%)
Query: 1 METRSAKRKKMAQIMENEAK-AAATDRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKF 59
METRS KRKK + E EA DRIS+LPD++ H IL LLP+K+AAQ S+LSKRW+
Sbjct: 1 METRSVKRKKKKK--EEEANWFIRVDRISNLPDSLNHQILLLLPLKSAAQASLLSKRWRS 58
Query: 60 LWTTFPDLDFRTID----PHAFSSRNLQSSDFETSGHPLASTMDFITQVLSTRDKDSDIR 115
L+ + PDLDF +I+ P +FSS ++ + + S RD ++ +R
Sbjct: 59 LFLSLPDLDFTSINDLKNPKSFSSNSIYK----------------VLSLRSHRDSNN-LR 101
Query: 116 ALCFRARLSFSRLNSLIRSAVRHNVKELDIEVTPEVRTDEYFNFPRCLIASKTLRVLKLR 175
+L FR ++F+ LNSLIR AV H V++LDIEVT T +YFNFPR ++ S+ LR L L+
Sbjct: 102 SLRFRVPVTFTSLNSLIRLAVTHQVQDLDIEVT----TKDYFNFPRWIVTSQNLRALTLK 157
Query: 176 S---GFRLPPSSIMKETFQSLHTLSLTLGPVDHQAPLSDLFTESAFPFLRNLHLQLCFGL 232
S GFRLPPSS + FQ L +LSL+ + +Q LSD FT+ +FP L L L+ CFGL
Sbjct: 158 SANLGFRLPPSSSARGGFQKLTSLSLSRVILHNQPCLSDFFTDPSFPLLEKLTLECCFGL 217
Query: 233 RVLRVGCLALRDLSLEKCINLHGLDVVTPKLERLRVSECFHGYHNKSWVRINAPKLESLF 292
+ L+V C L++ SL+ + L GL+V KL++L+V CF+ Y KS+V+IN P L++
Sbjct: 218 KELKVSCRLLQEFSLKNSLQLEGLEVSGNKLQKLKVESCFYSYSEKSFVKINTPNLKTFL 277
Query: 293 WQYNAVA-DVTVFERSNVLHEASVDFVLVMSKNDKVSMDKLQSAINFMAGLSCARSLTLD 351
W NAV V ++ L +A FV V + ++ ++QS ++GL + L L
Sbjct: 278 WNSNAVTTSVHFLDKLVCLRKA---FVKVFWHHQDLN-SQIQSLFTLLSGLCHSYKLQLG 333
Query: 352 SKTIELQKRITSMCSSPWLQMLSNSNFYIEPLYNLKSLELHTCFNKTNIQGLACLFRSSP 411
++++E+ + + ++ P +N++ LEL T N+ N+Q L+CLF+S P
Sbjct: 334 NQSVEILSSKKGLLKN-----------HLLPFHNMRFLELQTRLNRHNVQTLSCLFKSCP 382
Query: 412 TLHTLIVKIIDHNKFDRKQWNKDLDMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLDC 471
L+ L VKIID +R+QWNKDL SN E QYWES+ L+ FL HL+ VEIHGF++C
Sbjct: 383 MLNILTVKIIDDQTSERRQWNKDLWDMSNSEIQYWESQAYELESFLNHLEFVEIHGFVEC 442
Query: 472 ENEVTLAKFLLKNGKALEEMVYFTGH-CNTSSTLRRQKVRQHMLMGVSWASSNAKVTF 528
ENE++LA FLL++GKAL +M + C S LRRQ +R L G S ASS AK++F
Sbjct: 443 ENEMSLAIFLLRHGKALIKMTLRSSFLCRDS--LRRQMIRS-QLTGFSMASSKAKISF 497
>emb|CAB86077.1| putative protein [Arabidopsis thaliana] gi|11357450|pir||T48331
hypothetical protein F15A17.130 - Arabidopsis thaliana
Length = 436
Score = 91.7 bits (226), Expect = 5e-17
Identities = 116/481 (24%), Positives = 199/481 (41%), Gaps = 92/481 (19%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
D IS LPD +LHHIL+ P K A +TS+LSKRWK +W P
Sbjct: 9 DFISSLPDEILHHILANTPTKLAIRTSVLSKRWKHVWYETPS------------------ 50
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSFSRLNSLIRSAVRHNVKELD 144
I+ V + D DS LN + S +K D
Sbjct: 51 ----------------ISIVCNRVDPDS---------------LNKTLSSYSTPKIKSFD 79
Query: 145 IEVTPEVRTDEYFNFPRCLIASKTLRV-LKLRSGFRLPPSSIMKETFQSLHTLSLTLGPV 203
+ ++ +V E + ++ K V L+ S +R + + + + L +L+L +
Sbjct: 80 VTISRDVTVPEIDTWINLALSRKAENVSLRFTSHYRFRDTFFINSSLKQL-SLTLVYCIL 138
Query: 204 DHQAPLSDLFTESAFPFLRNLHLQLC----FGLRVLRVGCLALRDLSLEKCINLHGLDV- 258
+ + +S + LRNL L C + + GC L L+L C L+ LD+
Sbjct: 139 NPKCVVS-------WSSLRNLSLNRCKVSDDSIAKILTGCSLLESLTLNLCDRLNDLDLS 191
Query: 259 VTPKLERLRVSECFHGYHNKSWV--RINAPKLESL----FWQYNAVADVTVFERSNV-LH 311
+ L RL + W RI AP + L + + + + DV+ +N+ L
Sbjct: 192 KSLSLRRLEIL-------GDRWTPERIVAPHIRYLRLENYQRPSTLVDVSSLTEANLGLS 244
Query: 312 EASVDFVLVMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCSSPWLQ 371
+ +D+ + + + Q+ + L + LT+ I LQ+ + S+C L+
Sbjct: 245 KHVLDYFTCEMETESLQYMVRQTVVK----LQNIKKLTIGG--IFLQEHMKSLCGIWKLE 298
Query: 372 MLSNSNFYIEPLYNLKSLELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNKFDRKQW 431
++ P +N+++L + T +++ I GLA L ++SP L + V I N K
Sbjct: 299 VVR------LPEFNIEALTVETRIDQSVIPGLARLLQNSPGLKRITVNITKCNTTPDKHL 352
Query: 432 NKDLDMTSNEEEQYWESE---IPTLKPFLQHLKVVEIHGFLDCENEVTLAKFLLKNGKAL 488
++ L + +Q W S+ PT++ +K V+ L N TL K +L+ G L
Sbjct: 353 DRHLKLRGLNPDQSWISKYGVFPTVEQTSAKMKHVDSFIKLVMGNTKTLEKLVLQFGDYL 412
Query: 489 E 489
+
Sbjct: 413 D 413
>ref|NP_176127.1| F-box family protein [Arabidopsis thaliana]
Length = 505
Score = 90.5 bits (223), Expect = 1e-16
Identities = 134/529 (25%), Positives = 227/529 (42%), Gaps = 78/529 (14%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRN--L 82
D IS LPD++L HILS L K AA TS+L+K+W++L+ + P+LDF RN +
Sbjct: 8 DIISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLGKRNPAV 67
Query: 83 QSSDF-----ETSGHPLASTMDFITQVLSTRDKDSDIRALCFRAR--LSFSRLNSLIRSA 135
D+ E S S MDF+ QVL +D +S + + R + R+ I
Sbjct: 68 SGEDYLKMINERSDQLSTSFMDFVDQVLRLQD-NSPLHKFSLKIRDCVDIVRIICWILKV 126
Query: 136 VRHNVKELDIEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSLHT 195
+ V +L++++ + ++ + P + S+TL LKL S+ + F +
Sbjct: 127 LERGVSDLELDMHLKWKS----SLPSKIFLSETLVRLKL---------SVERGPFIDVED 173
Query: 196 LSLTLGPVDHQAPLSDLFTESAFPFLRNLHLQLC------FGLRVLRVGCLALRDLSLEK 249
+ L P L+ LH+ GL L GC L +L+LE
Sbjct: 174 VHL--------------------PKLKTLHIVSVKFEKHGIGLNKLLSGCHILEELNLEY 213
Query: 250 CINLHGLDVVTPKLERL-RVSECFHGYHNKSWVRI--NAPKLESLFWQYNAVADVTVFER 306
I+ D V+ L L R++ C +++ + + N P L L + +A+AD
Sbjct: 214 -ISWCLWDFVSVSLTTLKRLTFCGEVMQDENPISVSFNTPNLVYLMFT-DAIADEYSTVN 271
Query: 307 SNVLHEASVDFVLVMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCS 366
+ L EA ++ L MS+ D+V + + M G A + L ++ S+ +
Sbjct: 272 FDSLVEAHIN--LQMSE-DQVEQTRFSDSEGNMEGCMVANATELIMGICNVKILYLSVYT 328
Query: 367 SPWLQMLSNSNFYIEPLYNLKSLELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNKF 426
L++L+ I NL L + + ++ + ++ L ++SP L TL+ K + H
Sbjct: 329 ---LEVLTYCCEAIPLFNNLTHLTIESN-SEVGWESVSGLLKNSPNLETLVFKGLVHRFT 384
Query: 427 DR-------KQWNKDLDMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLD--CENEVTL 477
D+ K W +D + +EE S P ++ LK++E D E +
Sbjct: 385 DKCGDMCLCKPWEEDEEEEEDEETPTCLSSCP-----VKVLKILEFGKIYDDEIEKRIDQ 439
Query: 478 AKFLLKNGKALEEMVYFTGHCNTSSTLRRQKVRQHMLMGVSWASSNAKV 526
K L+ +E+++ H NT KV Q + ASS K+
Sbjct: 440 VKHFLEKIPDIEQLIL---HYNTPVDEDVIKVYQQLRRHPKVASSKCKL 485
>emb|CAB91590.1| putative protein [Arabidopsis thaliana] gi|26450835|dbj|BAC42525.1|
unknown protein [Arabidopsis thaliana]
gi|29028916|gb|AAO64837.1| At3g59200 [Arabidopsis
thaliana] gi|15231646|ref|NP_191479.1| F-box family
protein [Arabidopsis thaliana] gi|11357652|pir||T48988
hypothetical protein F25L23.60 - Arabidopsis thaliana
Length = 520
Score = 86.7 bits (213), Expect = 2e-15
Identities = 132/511 (25%), Positives = 198/511 (37%), Gaps = 92/511 (18%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
DRIS LP+ V+ HILS LP K AA TS+LSK+W++L+ +LDF D
Sbjct: 7 DRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSD----YQDGKPK 62
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDS--DIRALCFRARLSFSRLNSLIRSAVRHNVKE 142
SD E S S M+F+ +VL+ + S C + +R+ I + + V E
Sbjct: 63 SDVELS----RSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSE 118
Query: 143 LDIEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETF-QSLHTLSLTLG 201
LD+ + + P + SKTL LKL L + K+ F L TL +
Sbjct: 119 LDLSILE-------YPLPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCV 171
Query: 202 PVDHQAPLSDLFTESAFPFLRNLHLQLCFGLRVLRVGCLALRDLSLEKC--INLHGLDVV 259
V + FG L GC L +L L N V
Sbjct: 172 DVQERG----------------------FGFVKLLSGCPVLEELVLMNIGWENWKFCSVS 209
Query: 260 TPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQYNAVADVTVFERSNVLHEASVDFVL 319
L+RL C Y N V + P L L + +A+A N L EA + L
Sbjct: 210 VKTLKRLTFF-CEETYENPKSVSFDTPNLVYLEYS-DAIASKYPKVNFNSLVEAHIGLRL 267
Query: 320 V--------MSKNDKVS-----MDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCS 366
S+ D S + +A +F+ G+S + L L ++ IE+ +T C
Sbjct: 268 TEDQSGDADFSEEDYFSEGDEKKQMVGNATDFLKGISTVQILYLSAQAIEV---LTFCC- 323
Query: 367 SPWLQMLSNSNFYIEPLYNLKSLELHTCFNKTNIQ--GLACLFRSSPTLHTLIVKIIDHN 424
EP+ +L T N + I+ L L ++ P L TL++K + H
Sbjct: 324 --------------EPIPVFNNLIQLTIENNSEIRWDSLPGLLKNCPNLETLVLKRLLH- 368
Query: 425 KFDRKQWNKDLDMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLDCE----NEVTLAKF 480
K+++ N + S + LK FL F D + +E+ K+
Sbjct: 369 KYNKACGNVCCCKRPKQPSCLSSSPVKVLKIFL----------FDDNDEEDGSEMRQIKY 418
Query: 481 LLKNGKALEEMVYFTGHCNTSSTLRRQKVRQ 511
L+ LEE+V + + L K Q
Sbjct: 419 FLEKMPRLEELVVYYNTAYDPAVLELSKKLQ 449
>emb|CAB86024.1| putative protein [Arabidopsis thaliana]
gi|15241919|ref|NP_195890.1| F-box family protein
[Arabidopsis thaliana] gi|11357903|pir||T48291
hypothetical protein F9G14.10 - Arabidopsis thaliana
Length = 456
Score = 82.4 bits (202), Expect = 3e-14
Identities = 116/487 (23%), Positives = 197/487 (39%), Gaps = 109/487 (22%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
D I+ +PD +LHHILS +P A +TS+LS+RW+ +W P LD H ++ L S
Sbjct: 27 DFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDITL--KHGAMNQTLTS 84
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSFSRLNSLIRSAVRHNVKELD 144
T IT D +S+ + +++S I A+ NV+ L
Sbjct: 85 -----------YTAPIITSFKLVMDLNSN----------TVPQVDSWIEFALSRNVQNLS 123
Query: 145 IEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSLHTLSLTLGPVD 204
+ V + + + FP S +L++L + F F + T ++
Sbjct: 124 VFVR-DFTYSKTYRFPDIFYLSSSLKLLDVTLDF-----------FDMIPTCTV------ 165
Query: 205 HQAPLSDLFTESAFPFLRNLHLQLC----FGLRVLRVGCLALRDLSLEKCINLHGLDV-V 259
++ LRNL L+ C + + GC L L+L+ C L LD+
Sbjct: 166 ------------SWKSLRNLTLRFCQIPDESIHNILSGCPILESLTLDTCRLLERLDLSK 213
Query: 260 TPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQYNAVADVTVFERSNVLHEASVDFVL 319
+P L RL +++ Y V I AP + L Y++ V +V + + +
Sbjct: 214 SPNLRRLDINQ---QYRRTGPVAIVAPHIYYLRLTYSSTPSTIV----DVSSLSEANLTI 266
Query: 320 VMSKNDKVSMDKLQS-AINFMAGLSCARSLTLDSKTIELQKRITSMCSSPWLQMLSNSNF 378
+ S ++ D Q+ A+ ++ + LT+ +++ + + P+
Sbjct: 267 ISSLLSPLTADGYQTMALEMLSKFHNVKRLTVGETLLQILS-LAELRGVPF--------- 316
Query: 379 YIEPLYNLKSLELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNKFDRKQWNKDLDMT 438
P +++L + T F ++ I G++ L ++SP L L R K +
Sbjct: 317 ---PTLKVQTLTVKTEFVRSVIPGISRLLQNSPGLKKL-----------RPSTMKMHHLK 362
Query: 439 SNEEEQYWESE---IPTLKPFLQHLKVVEIHGFLDCENEVTL---AKFL---LKNGKALE 489
+Q W S PT K EI+ L C N+ TL A F+ L+N K LE
Sbjct: 363 GLYPDQCWRSTCEVFPTSK---------EIYKMLGC-NDATLKLVASFMDLVLRNAKTLE 412
Query: 490 EMVYFTG 496
MV + G
Sbjct: 413 RMVVWLG 419
>dbj|BAB02857.1| unnamed protein product [Arabidopsis thaliana]
Length = 507
Score = 82.0 bits (201), Expect = 4e-14
Identities = 127/492 (25%), Positives = 202/492 (40%), Gaps = 111/492 (22%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
D I+ +PD +LHHILS +P A +TS+LS+RW+ +W P LD + H +++ L S
Sbjct: 70 DFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDIKL--KHGETNQTLTS 127
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSFSRLNSLIRSAVRHNVKELD 144
T IT D + + + +++S I A+ NV+ L
Sbjct: 128 -----------YTAPIITSFKLVMDLNDN----------TVPQVDSWIEFALSRNVQNLS 166
Query: 145 IEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSLHTLSLTLGPVD 204
+ V T Y FP S +L+ L + F F + T ++
Sbjct: 167 VFVRDFTYTKTY-RFPDIFYISSSLKQLDVTLDF-----------FDMIPTCAV------ 208
Query: 205 HQAPLSDLFTESAFPFLRNLHLQLC----FGLRVLRVGCLALRDLSLEKCINLHGLDV-V 259
++ LRNL L+ C + + GC L L+L+ C L LD+
Sbjct: 209 ------------SWKSLRNLTLRFCQIPDESMHNILSGCPILESLTLDTCRLLERLDLSK 256
Query: 260 TPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQYNAVADVTVFERSNVLHEASVDFVL 319
+P L RL ++ Y + I AP + L Y++ V S L EA+++ +
Sbjct: 257 SPNLRRLDIN---RQYRRTGPIAIVAPHIYYLRLTYSSTPSTIVDVSS--LSEANLNII- 310
Query: 320 VMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCSSPWLQMLSNSNFY 379
D+L S + A +L + SK + KR+T LQ+LS +
Sbjct: 311 ---------SDRLLSPLT--ADRYQTMALEMLSKFHNV-KRLT--VGETILQILSLAELR 356
Query: 380 IEPLYNLK--SLELHTCFNKTNIQGLACLFRSSP-----TLHTLIVKIIDHNKFDRKQWN 432
P LK +L + T F ++ I G++ L ++SP TLHTL + H+ +
Sbjct: 357 GVPFPTLKVQTLTVKTEFVRSVIPGISRLLQNSPGLKKLTLHTL---QLSHDIMEMH--- 410
Query: 433 KDLDMTSNEEEQYWESE---IPTLKPFLQHLKVVEIHGFLDCENEVT--LAKFL---LKN 484
+ +Q W S PT K EI+ L C + + +A F+ L+N
Sbjct: 411 ---PLKGLYPDQCWRSTCEVFPTSK---------EIYKMLGCNDATSKLVASFMNLVLRN 458
Query: 485 GKALEEMVYFTG 496
K LE MV + G
Sbjct: 459 AKTLERMVVWLG 470
>ref|NP_189482.1| F-box family protein [Arabidopsis thaliana]
Length = 465
Score = 82.0 bits (201), Expect = 4e-14
Identities = 127/492 (25%), Positives = 202/492 (40%), Gaps = 111/492 (22%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
D I+ +PD +LHHILS +P A +TS+LS+RW+ +W P LD + H +++ L S
Sbjct: 28 DFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDIKL--KHGETNQTLTS 85
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSFSRLNSLIRSAVRHNVKELD 144
T IT D + + + +++S I A+ NV+ L
Sbjct: 86 -----------YTAPIITSFKLVMDLNDN----------TVPQVDSWIEFALSRNVQNLS 124
Query: 145 IEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSLHTLSLTLGPVD 204
+ V T Y FP S +L+ L + F F + T ++
Sbjct: 125 VFVRDFTYTKTY-RFPDIFYISSSLKQLDVTLDF-----------FDMIPTCAV------ 166
Query: 205 HQAPLSDLFTESAFPFLRNLHLQLC----FGLRVLRVGCLALRDLSLEKCINLHGLDV-V 259
++ LRNL L+ C + + GC L L+L+ C L LD+
Sbjct: 167 ------------SWKSLRNLTLRFCQIPDESMHNILSGCPILESLTLDTCRLLERLDLSK 214
Query: 260 TPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQYNAVADVTVFERSNVLHEASVDFVL 319
+P L RL ++ Y + I AP + L Y++ V S L EA+++ +
Sbjct: 215 SPNLRRLDIN---RQYRRTGPIAIVAPHIYYLRLTYSSTPSTIVDVSS--LSEANLNII- 268
Query: 320 VMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCSSPWLQMLSNSNFY 379
D+L S + A +L + SK + KR+T LQ+LS +
Sbjct: 269 ---------SDRLLSPLT--ADRYQTMALEMLSKFHNV-KRLT--VGETILQILSLAELR 314
Query: 380 IEPLYNLK--SLELHTCFNKTNIQGLACLFRSSP-----TLHTLIVKIIDHNKFDRKQWN 432
P LK +L + T F ++ I G++ L ++SP TLHTL + H+ +
Sbjct: 315 GVPFPTLKVQTLTVKTEFVRSVIPGISRLLQNSPGLKKLTLHTL---QLSHDIMEMH--- 368
Query: 433 KDLDMTSNEEEQYWESE---IPTLKPFLQHLKVVEIHGFLDCENEVT--LAKFL---LKN 484
+ +Q W S PT K EI+ L C + + +A F+ L+N
Sbjct: 369 ---PLKGLYPDQCWRSTCEVFPTSK---------EIYKMLGCNDATSKLVASFMNLVLRN 416
Query: 485 GKALEEMVYFTG 496
K LE MV + G
Sbjct: 417 AKTLERMVVWLG 428
>dbj|BAB08761.1| unnamed protein product [Arabidopsis thaliana]
gi|15239757|ref|NP_200293.1| F-box family protein
[Arabidopsis thaliana]
Length = 472
Score = 77.8 bits (190), Expect = 8e-13
Identities = 110/487 (22%), Positives = 209/487 (42%), Gaps = 81/487 (16%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
DR+S LPD +L I+S LP+K +TS+LSKRW++L +L F+ D + + ++
Sbjct: 7 DRLSSLPDILLIMIISFLPLKECVRTSVLSKRWRYLCLETTNLSFKESD---YVNPDITD 63
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSFS-RLNSLIRSAVRHNVKEL 143
+++ + V T+ + + +CF + F ++++LI AV VK L
Sbjct: 64 AEYSRIVAYRSFFCSVDKWVSITQHQVVESFEICFSHLVGFEDKIDALIEYAVSTRVKNL 123
Query: 144 DIEVT-PEVRTDE-------YFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSLHT 195
++++ P R++ + P+ + + TL LK+ G + PS + L +
Sbjct: 124 VVDLSNPSWRSNGDISYRHFMYTLPKSVYSLTTLESLKIY-GCKFDPSKFVNPVL--LRS 180
Query: 196 LSLTLGPVDHQAPLSDLFTESAFPFLRNLHLQLCFGLRVLRVGCLALRDLSLEKCINLHG 255
LS+ +++ L L ++S P L++L ++ C+G+ + + R+L +E
Sbjct: 181 LSIGWVRLEN---LHSLLSKS--PSLQSLSIKNCWGVDITSMAG-QFRELVIE------- 227
Query: 256 LDVVTPKLERLRVSECFHGYHNKSWVRINAPKLES------LFWQYNAVADVTVFERSNV 309
H + P++ S LF Y V +V + NV
Sbjct: 228 -----------------HSDFSYMQCAFELPRIHSFKYSGELFEFYFDVVNVII---PNV 267
Query: 310 LHEASVDFVL-VMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCSSP 368
+ + V + S++ ++S + + IN L A +LT+ ++ + C P
Sbjct: 268 YLDFGEERVYDLQSQSSRISGEVISRIIN---DLRAAETLTVCPYILQ----VIPECEKP 320
Query: 369 WLQMLSNSNFYIEPLYNLKSLELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNKFDR 428
+ ++P+ + L L T + G+ L + P L TL I+ F
Sbjct: 321 --------SDLLQPM-ETRHLVLRTKMHTKEFNGIILLLNNCPNLETLGFDILTPCPFSA 371
Query: 429 KQWNKDLDMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLDCENEVTLAKFLLKN---- 484
++ +D + YW + T K + LKVV I F NE+ + ++L+++
Sbjct: 372 TSSDEGID-----PKTYWMQK-RTCKSLRKTLKVVVIRNFCGSSNELNVLRYLIRSASGA 425
Query: 485 GKALEEM 491
G ALE +
Sbjct: 426 GDALERV 432
>dbj|BAB11270.1| unnamed protein product [Arabidopsis thaliana]
gi|42573694|ref|NP_974943.1| F-box family protein
[Arabidopsis thaliana] gi|15241211|ref|NP_200453.1|
F-box family protein [Arabidopsis thaliana]
Length = 422
Score = 77.4 bits (189), Expect = 1e-12
Identities = 82/258 (31%), Positives = 117/258 (44%), Gaps = 27/258 (10%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
DR+S LPD L ILS LP K TS+LSKRW+FLWT P L++ R Q
Sbjct: 6 DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPRFSQF 65
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSFSRLNSLIRSAVRHNVKELD 144
D H A T++ + + I ++CF A + +R V V+EL
Sbjct: 66 VDRSLLLHK-APTLESL---------NIKIGSICFTAE---KDVGVWVRIGVDRFVRELS 112
Query: 145 IEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSLHTLSLTLGPVD 204
+ +E P+CL TL VLKL + L +S FQSL TL L V
Sbjct: 113 VSY---CSGEEPIRLPKCLFTCSTLAVLKLEN-ITLEDASCY-VCFQSLKTLHLL--DVK 165
Query: 205 HQAPLSDLFTESAFPFLRNLHLQLCFG--LRVLRVGCLALRDLSLEKCINL-----HGLD 257
+ S S+ L +L +Q C G ++V+ V +L+ LSL K G
Sbjct: 166 YLDDQSLPRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFL 225
Query: 258 VVTPKLERLRVSECFHGY 275
+ TPKL+R+ + + + G+
Sbjct: 226 IDTPKLKRVDIEDYWGGF 243
>dbj|BAB10659.1| unnamed protein product [Arabidopsis thaliana]
gi|15238204|ref|NP_198999.1| F-box family protein
[Arabidopsis thaliana]
Length = 540
Score = 76.3 bits (186), Expect = 2e-12
Identities = 113/440 (25%), Positives = 183/440 (40%), Gaps = 84/440 (19%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDF-RTIDPHAFSSRNLQ 83
DRIS LPDA++ HILS LP K AA T++L+KRWK L P+L+F +I H + RN
Sbjct: 14 DRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARRNKY 73
Query: 84 SSDFETSGHPLASTMDFITQVLSTRDK-DSDIRALCFRAR--LSFSRLNSLIRSAVRHNV 140
S +E S M F+ VL+ + K + ++ + + S + I ++ V
Sbjct: 74 SKSYE-------SFMSFVDSVLALQAKTKTPLKRFHVKCEDVVDQSWVLEWIPKVLKRGV 126
Query: 141 KELDIEVTPE---VRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQ-SLHTL 196
++D+ +T +++ P + SKTL LK++ FQ +H
Sbjct: 127 LDIDLHITSSRNYCENSSFYSLPSKIFVSKTLVRLKIQ--------------FQDGVH-- 170
Query: 197 SLTLGPVDHQAPLSDLFTESAFPFLRNLHLQL----CFGLRVLRVGCLALRDLSLEKCI- 251
+D + +S P L+ LHL L L GC AL +L L +
Sbjct: 171 ------IDVEGGVS-------LPKLKTLHLDYFKIETSMLNKLLSGCHALEELVLANLMW 217
Query: 252 ------NLHGLDVVTPKLERLRVSEC-------FHGYHNKSWVRIN---APKLESLFWQY 295
+ V P L+RL FH Y + IN + ++ Y
Sbjct: 218 ADSSEDEACHVSVSIPTLKRLNFCRSEDFYEGEFHFYEDYDEENINEGVSLSFDNPNLVY 277
Query: 296 NAVADVTVFERSNVLHEASVDFVLVMSKN-DKVSMDKLQSAINFMAGLSCARSLTLDSKT 354
+DV V + V ++ V+ L + K D+ DK+ + + G+ + L L T
Sbjct: 278 LEYSDVIVDKYKQVSFDSLVEANLRLRKTPDQDETDKV-NVTKLLMGIHNVKILYLSDDT 336
Query: 355 IELQKRITSMCSSPWLQMLSNSNFYIEPLYNLKSLELHTCFNKTNIQGLACLFRSSPTLH 414
+E +LS I NL L + T + L L +S P+L
Sbjct: 337 LE---------------VLSCCRERIPVFDNLLELTIKTT-PYVGWKSLPPLLKSCPSLE 380
Query: 415 TLIVKIIDHNKFDRKQWNKD 434
TL+ + + H+K+ ++ +KD
Sbjct: 381 TLVFEGL-HHKYTKRCGDKD 399
>dbj|BAB09899.1| unnamed protein product [Arabidopsis thaliana]
gi|15241936|ref|NP_200492.1| F-box family protein
[Arabidopsis thaliana]
Length = 435
Score = 75.9 bits (185), Expect = 3e-12
Identities = 104/384 (27%), Positives = 164/384 (42%), Gaps = 48/384 (12%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
DRIS LP+ +L ILSL+P+ A TS+LSKRWK +W P L + + S N+ S
Sbjct: 15 DRISQLPNDLLFRILSLIPVSDAMSTSLLSKRWKSVWKMLPTLVY-----NENSCSNIGS 69
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSFSRLNSLIRSAVRHNVKELD 144
F+ F + L + ++ L R L+S I + + E
Sbjct: 70 LGFD----------QFCGRSLQLHEAPL-LKTLTLELRKQTDSLDSSIFPNIHSTLLEFS 118
Query: 145 IEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSLHTLSLTLGPVD 204
I+ T +FP L +TL VLKL+ L FQSL +L LT +
Sbjct: 119 IKSTGYPVYYSTISFPNNLDVFQTLVVLKLQGNICLDVVD-SPVCFQSLKSLYLTCVNFE 177
Query: 205 HQAPLSDLFTESAFPFLRNLHLQ-LCFGLRVLRVGCLALRDLSLEKCINLHGLDVVTPKL 263
++ S L SA P L +L LQ LC R L + P L
Sbjct: 178 NEESFSKLL--SACPVLEDLFLQRLCSVGRFL--------------------FSISVPSL 215
Query: 264 ERLRVSECFHGYHN-KSWVRINAPKLESLFWQYNAVADVTVFERSNVLHEASVDFVLVMS 322
+RL ++ Y N ++ + I AP L+ L ++ V + E L EASV + +S
Sbjct: 216 QRLTYTKEQAYYSNDEAILEITAPSLKHLN-IFDRVGVFSFIEDMPKLVEASVR--VKLS 272
Query: 323 KNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCSSPWLQMLSNSNF-YIE 381
KN+K + K+ +++ ++ L S+ + K++ + + SN ++
Sbjct: 273 KNEK--LPKVLTSVEHLS-LDLYPSMVFHLDDRFISKQLLHLKLDIYDNFQSNLLLSLLK 329
Query: 382 PLYNLKSLELHTCFNKTNIQGLAC 405
L NL+SL+L+ N++ C
Sbjct: 330 DLPNLQSLKLNHSHPSYNVEDQPC 353
>ref|NP_190473.2| F-box family protein [Arabidopsis thaliana]
Length = 415
Score = 75.5 bits (184), Expect = 4e-12
Identities = 100/373 (26%), Positives = 151/373 (39%), Gaps = 83/373 (22%)
Query: 14 IMENEAKAAATDRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTID 73
+ ENE DRIS+L +A+L HI+S LP KT TS+LSKRW+ +W T +L F +
Sbjct: 6 LFENE------DRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVSKY 59
Query: 74 PHAFSSRNLQSSDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSFSRLNSLIR 133
FS + F P ++D L F +L S L L+
Sbjct: 60 HQTFSEDVYRF--FMLHKAPFLESLD-----------------LEFSNQLDASDLGILVG 100
Query: 134 SAVRHNVKELDIEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSL 193
A +V+ L +++ D Y NF + A R P + + ++L
Sbjct: 101 IAFARHVRNLVLDL------DYYSNFSQLCAA-------------RFPSGLCIYDNNKTL 141
Query: 194 HTLSLTLGPVDHQAPLSDLFTESAFPF------LRNLHLQLCF-----GLRVLRVGCLAL 242
TL+L H L FP+ LR LHL + L GC +L
Sbjct: 142 ETLTL-----KHSILL-------YFPYRVCLKSLRKLHLYKVHFYGKDSVYNLLCGCPSL 189
Query: 243 RDLSLEKCIN-LHGLDVVTPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQYNAVADV 301
RDL + + + + P LERL + + GY INAP L+ L + +
Sbjct: 190 RDLIVHRYRECMETFTIAVPSLERLTIEDSGFGY--GCCYVINAPSLKYLNIRRFKYLNS 247
Query: 302 TVFERSNVLHEASVDFVLVMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRI 361
+ E++ L EA V V + N + L+ A+ L++ +E +
Sbjct: 248 CLIEKAPELAEAKVSDVSDIENE------------NILESLTSAKRLSIHLSPLEWWNLL 295
Query: 362 TSMC-SSPWLQML 373
T M +SP LQ+L
Sbjct: 296 TFMLEASPKLQIL 308
>gb|AAR24665.1| At1g52650 [Arabidopsis thaliana] gi|15219051|ref|NP_175674.1| F-box
family protein [Arabidopsis thaliana]
gi|5903041|gb|AAD55600.1| F6D8.13 [Arabidopsis thaliana]
gi|51969374|dbj|BAD43379.1| F6D8.13 [Arabidopsis
thaliana] gi|25352371|pir||D96567 F6D8.13 [imported] -
Arabidopsis thaliana
Length = 465
Score = 74.3 bits (181), Expect = 9e-12
Identities = 127/498 (25%), Positives = 213/498 (42%), Gaps = 73/498 (14%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
D +S LP+ VL +I S L K AA TSIL KRW+ L P+L ID F L
Sbjct: 2 DHVSSLPEGVLCNIFSFLTTKEAALTSILCKRWRNLLAFVPNL---VIDDSVF----LHP 54
Query: 85 SDFETSGHPL-ASTMDFITQVLSTRDKDSDIR--ALCFRARLSFSRLNSLIRSAVRHNVK 141
+ + + + S M+F+ +VL+ + +S I+ +L FR + R+N+ I + + V
Sbjct: 55 EEGKEERYEIQQSFMEFVDRVLALQG-NSPIKKFSLKFRTDFASHRVNAWISNVLARGVS 113
Query: 142 ELDIEVTPEVRTDEYFNF-PRCLIASKTLRVLKLRS-GFRLPPSSIMKETFQS--LHTLS 197
ELD+ V + E+ P+C S+ L LK+ S G I ++ LH++
Sbjct: 114 ELDVLVI--LYGAEFLPLSPKC-FKSRNLVTLKINSLGIDWLAGDIFLPMLKTLVLHSVK 170
Query: 198 LTLGPVDHQAPLSDLFTESAFPFLRNLHL-QLCFGLRVLRVGCLALRDLSLEKCINLHGL 256
L + D F A P L L L + + R + V +++ L+++ L L
Sbjct: 171 LCV----------DKFFFRALPALEELVLFAVSWRDRDVTVSNASIKTLTIKFNYYLGTL 220
Query: 257 DVVTPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQYNAVADVTVFERSNVLHEASVD 316
+ TP L VS CF + K + KL + + + ER+ + V+
Sbjct: 221 SLDTPSL----VSFCFSDHVAKDYPLAKMEKLSEA--RISLLVTEYQIERARAPNIYWVE 274
Query: 317 FVLVMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCSSPWLQMLSNS 376
+V+ +L + M G+ + L L T+E+ ++ C S
Sbjct: 275 DDVVL---------RLVNVGKLMKGIRNVQYLNLSPNTLEV---LSKCCES--------- 313
Query: 377 NFYIEPLY-NLKSLELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNKFDRKQWNKDL 435
PL+ NLKSL + + + Q + L R+ P L TL+++ + H+ ++
Sbjct: 314 ----MPLFNNLKSLTIES-NERRGWQAMPVLLRNCPHLETLVLEGLLHHVTEK--CRNAC 366
Query: 436 DMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLDCENEVTLAKFLLKNGKALEEMVYFT 495
D S EE+ + +KV+EI GF E+ K L++ L E+
Sbjct: 367 DCVSQEEKGRSLTSC--------QVKVLEIKGFQGTTKEMHTIKHFLEHFPCLREIKIHM 418
Query: 496 GHCNTSSTLRRQKVRQHM 513
N + LR +V Q++
Sbjct: 419 EE-NGPTQLRVPEVSQYI 435
>ref|NP_919076.1| putative RNA apurinic site specific lyase [Oryza sativa (japonica
cultivar-group)]
Length = 448
Score = 74.3 bits (181), Expect = 9e-12
Identities = 122/502 (24%), Positives = 193/502 (38%), Gaps = 119/502 (23%)
Query: 19 AKAAAT----DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDP 74
A AAT D+I LPD +L ILSLLP+ AA+T+ LS+RW+ LW + P
Sbjct: 10 AATAATGEDPDQIGRLPDCLLTTILSLLPLDAAARTTALSRRWRSLWPSAP--------- 60
Query: 75 HAFSSRNLQSSDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFR---ARLSFSRLNSL 131
L SD + L++ I+ +L++ D A+ FR R S + L++
Sbjct: 61 -----LRLHDSDLPSRSQYLSAA---ISGILASHRGD----AVSFRLSSGRPSSADLDTW 108
Query: 132 IRSAVRHNVKELDIEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQ 191
+R ++EL ++ E P L+ +LR L + RLP ++ +F
Sbjct: 109 LRILAGKRLQELLLQ-----PPSEPLPLPPSLLGCHSLRSADL-TNCRLPAAAAATASFP 162
Query: 192 SLHTLSLTLGPVDHQAPLSDLFTESAFPFLRNLHLQLCFGLRVLRVGCLALRDLSLEKCI 251
LH L+L +A L L + P L L L FG R LRV LR L++ +
Sbjct: 163 HLHELTLRYCFASSRA-LHGLL--AGCPALAALSLDRVFGCRSLRVRSRTLRSLTVS--V 217
Query: 252 NLHGLDVVTPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQYNAVADVTVFERSNVLH 311
+L D V +L+ L V + P LE L DV +VLH
Sbjct: 218 SLRRRDEVGDELQDLAVED--------------GPLLERLLGH-----DVNWGPSIHVLH 258
Query: 312 EASVDF-----VLVMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCS 366
++ V + S ++ A+ A C ++L L+ +++ + +
Sbjct: 259 APRLEMLGYLGVGIPSLQIGAALFHSMRAVRLAAEFRCLKTLALEMVDPQVKPVVDFLRC 318
Query: 367 SPWLQMLSNSNFYIEPLYNLKSLELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNKF 426
P L+ L ++ EP +S+E C N + CL R
Sbjct: 319 FPCLEALYITSHMFEP----RSMETLKCDNMD--YPIECLNR------------------ 354
Query: 427 DRKQWNKDLDMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLDCENEVTLAKFLLKNGK 486
HLK V + G+ E+ LA+FL+ N +
Sbjct: 355 --------------------------------HLKKVVLAGYEGRRRELQLARFLVSNAR 382
Query: 487 ALEEMVYFTGHCNTSSTLRRQK 508
L+ M + + + L QK
Sbjct: 383 VLQVMKFLCANDCKPTWLASQK 404
>emb|CAB91589.1| putative protein [Arabidopsis thaliana] gi|11357651|pir||T48987
hypothetical protein F25L23.50 - Arabidopsis thaliana
Length = 514
Score = 74.3 bits (181), Expect = 9e-12
Identities = 122/514 (23%), Positives = 207/514 (39%), Gaps = 102/514 (19%)
Query: 21 AAATDRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTI---DPHAF 77
+ + D IS+LPDA+L H+LS LP AA TS+L+KRW+FL P+LD + P
Sbjct: 3 SGSKDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMG 62
Query: 78 SSRNLQSSDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSF--SRLNSLIRSA 135
+ L+ S F+ +V++ + ++ ++ R ++ SR+N +
Sbjct: 63 RRKRLELR---------KSFKLFVDRVMALQG-NAPLKKFSLRCKIGSDPSRVNGWVLKV 112
Query: 136 VRHNVKELDIEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSLHT 195
+ V+ELD+ + E + +P LPP +M +T SL
Sbjct: 113 LDRGVEELDLYIASE------YEYP-------------------LPPKVLMTKTLVSLKV 147
Query: 196 LSLTLGPVDHQAPLSDLFTESAFPFLRNLHLQ-LCFG------LRVLRVGCLALRDLSLE 248
+D E P L+ LHL + FG L C AL +L +
Sbjct: 148 SGTDEFTID--------VGEFFLPKLKTLHLSAISFGDEGGPPFAKLISACHALEELVMI 199
Query: 249 KCI--NLHGLDVVTPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQYNAVADVTVFER 306
K + V +P L+R+ + +C + N V + P L L + + VA
Sbjct: 200 KMMWDYWEFCSVSSPSLKRVSI-DCENIDENPKSVSFDTPNLVYLEFT-DTVAVKYPKVN 257
Query: 307 SNVLHEASVDFVL----VMSKNDKVSMD------KLQSAINFMAGLSCARSLTLDSKTIE 356
+ L EAS+ + V D V+ K +A +FM G+ +++ L S+ +E
Sbjct: 258 FDSLVEASIGLRMTPDQVFDARDLVNRHHGYKRCKGANAADFMMGVCNVKTMYLSSEALE 317
Query: 357 LQKRITSMCSSPWLQMLSNSNFYIEPLYNLKSLELHTCFNKTNIQGLACLFRSSPTLHTL 416
+ +T C I NL L + T + + + L L ++ P L TL
Sbjct: 318 V---LTFCCKKA-----------IPVFNNLIHLTVET-DERVDWESLPILLKNCPNLETL 362
Query: 417 IVKIIDHNK----FDRKQWNKDLDMTSNEE-----------EQYWESEIPTLKPFLQHLK 461
I + + + FD+ KD + ++ W S P L+ LK
Sbjct: 363 IFEGLHYGDLNQCFDKDYSFKDTNECYGDQGDTCQCKPWYGTPVWLSSSPV--KILKVLK 420
Query: 462 VVEIHGFL-DCENEVTLAKFLLKNGKALEEMVYF 494
+I + D E + L + L++ LE+++ F
Sbjct: 421 FGQISSYKDDMERQTDLIEHFLESMPNLEQVILF 454
>dbj|BAD43375.1| F6D8.13 [Arabidopsis thaliana]
Length = 507
Score = 74.3 bits (181), Expect = 9e-12
Identities = 127/498 (25%), Positives = 213/498 (42%), Gaps = 73/498 (14%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
D +S LP+ VL +I S L K AA TSIL KRW+ L P+L ID F L
Sbjct: 44 DHVSSLPEGVLCNIFSFLTTKEAALTSILCKRWRNLLAFVPNL---VIDDSVF----LHP 96
Query: 85 SDFETSGHPL-ASTMDFITQVLSTRDKDSDIR--ALCFRARLSFSRLNSLIRSAVRHNVK 141
+ + + + S M+F+ +VL+ + +S I+ +L FR + R+N+ I + + V
Sbjct: 97 EEGKEERYEIQQSFMEFVDRVLALQG-NSPIKKFSLKFRTDFASHRVNAWISNVLARGVS 155
Query: 142 ELDIEVTPEVRTDEYFNF-PRCLIASKTLRVLKLRS-GFRLPPSSIMKETFQS--LHTLS 197
ELD+ V + E+ P+C S+ L LK+ S G I ++ LH++
Sbjct: 156 ELDVLVI--LYGAEFLPLSPKC-FKSRNLVTLKINSLGIDWLAGDIFLPMLKTLVLHSVK 212
Query: 198 LTLGPVDHQAPLSDLFTESAFPFLRNLHL-QLCFGLRVLRVGCLALRDLSLEKCINLHGL 256
L + D F A P L L L + + R + V +++ L+++ L L
Sbjct: 213 LCV----------DKFFFRALPALEELVLFAVSWRDRDVTVSNASIKTLTIKFNYYLGTL 262
Query: 257 DVVTPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQYNAVADVTVFERSNVLHEASVD 316
+ TP L VS CF + K + KL + + + ER+ + V+
Sbjct: 263 SLDTPSL----VSFCFSDHVAKDYPLAKMEKLSEA--RISLLVTEYQIERARAPNIYWVE 316
Query: 317 FVLVMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCSSPWLQMLSNS 376
+V+ +L + M G+ + L L T+E+ ++ C S
Sbjct: 317 DDVVL---------RLVNVGKLMKGIRNVQYLNLSPNTLEV---LSKCCES--------- 355
Query: 377 NFYIEPLY-NLKSLELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNKFDRKQWNKDL 435
PL+ NLKSL + + + Q + L R+ P L TL+++ + H+ ++
Sbjct: 356 ----MPLFNNLKSLTIES-NERRGWQAMPVLLRNCPHLETLVLEGLLHHVTEK--CRNAC 408
Query: 436 DMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLDCENEVTLAKFLLKNGKALEEMVYFT 495
D S EE+ + +KV+EI GF E+ K L++ L E+
Sbjct: 409 DCVSQEEKGRSLTSC--------QVKVLEIKGFQGTTKEMHTIKHFLEHFPCLREIKIHM 460
Query: 496 GHCNTSSTLRRQKVRQHM 513
N + LR +V Q++
Sbjct: 461 EE-NGPTQLRVPEVSQYI 477
>ref|NP_910190.1| putative RNA apurinic site specific lyase [Oryza sativa (japonica
cultivar-group)] gi|24414165|dbj|BAC22408.1| putative
RNA apurinic site specific lyase [Oryza sativa (japonica
cultivar-group)]
Length = 475
Score = 73.9 bits (180), Expect = 1e-11
Identities = 105/385 (27%), Positives = 169/385 (43%), Gaps = 61/385 (15%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
D IS LP+A+L I+SLLP K AA+T +S+RW+ LW + P +D + S++ +
Sbjct: 28 DHISCLPEAILGEIISLLPTKDAARTQAVSRRWRPLWRSTP----LNLDVDSLSTQERK- 82
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIRAL-CFRARLSFSRLNSLIRSAVRHNVKEL 143
TM F++++L++ + +L FR R +++L+ +RS +++EL
Sbjct: 83 -----------RTM-FVSRILASHPGPARRLSLPFFRLRDRYAKLDGWLRSPALADLQEL 130
Query: 144 DIEVTPEVRTDEYFNFPRCLIASKTLRVLKLRSGFRLPPSSIMKETFQSLHTLSLTLGPV 203
D E Y P L + TLRV++LR+ P F L L+L +
Sbjct: 131 DFSYDIEDEEALYPLPPSALRFAPTLRVVELRT-CHFPNGMAPALHFPRLARLTLYRVTI 189
Query: 204 DHQAPLSDLFTESAFPFLRNLHLQLCFGLRVLRVGCLALRDL-----SLEKCINLHGLDV 258
L SA L +L L FG+R LR+ LR L S E + + +V
Sbjct: 190 SEDTLHGLLSRCSA---LESLLLVGNFGIRRLRINSPFLRSLGFSASSWEGYRDANFQEV 246
Query: 259 V---TPKLERLRVSECFHGYHNKSWVR-INAPKLESLFWQYNAVADV----TVFERS--- 307
V P LERL + H + +R I APKLE L + ++ + T F++
Sbjct: 247 VIEDAPCLERLMP---LYPNHGPATIRVIAAPKLEVLGVLSDGISQLHLGTTFFQKMIAV 303
Query: 308 NVLHEASVDFVLVMSKNDKVSMDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMCSS 367
N+ VLV+ N L ++F+ C L + S+ ++ K I S
Sbjct: 304 NLTTSIRTVKVLVLDSNG----PNLDVVVDFLKCFPCLERLYVVSRPHKVIKNIRS---- 355
Query: 368 PWLQMLSNSNFYIEPLYNLKSLELH 392
+PL+ ++ +ELH
Sbjct: 356 ------------YDPLHPIECMELH 368
>emb|CAB91591.1| putative protein [Arabidopsis thaliana] gi|11357653|pir||T48989
hypothetical protein F25L23.70 - Arabidopsis thaliana
Length = 491
Score = 73.9 bits (180), Expect = 1e-11
Identities = 123/489 (25%), Positives = 204/489 (41%), Gaps = 84/489 (17%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
D I+ LPD +L ILS L K AA TS+LSKRW++L+ P+LDF + P +Q
Sbjct: 7 DIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVL-PSLHPEVAMQD 65
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIR-ALCFRARLSFSRLNSLIRSAVRHNVKEL 143
D S +DF+ +VL R KD + +L + + I + +RH V +L
Sbjct: 66 QD-------QTSFIDFVDRVLKLRGKDHINKFSLKCGDGIEDEDVFPWILNTLRHGVSDL 118
Query: 144 DIEVTPEVRTDEYFNFPRCLIASKTLRVLKL--RSGFRLPPSSIMKETFQSLHTLSLTLG 201
+ V+P + + P + ASKTL LK+ + G P + L TL+L
Sbjct: 119 SLHVSPSL----VYWLPSKVFASKTLVRLKIGPKDG---PRVKLRNVCLPKLKTLNLD-- 169
Query: 202 PVDHQAPLSDLFTESAFPFLRNLHLQLCFGLRVLRVGCLALRDLSLEKCINL-----HGL 256
S +F E F + L GC L +LSL +NL
Sbjct: 170 --------SVVFEEGKIGFAK------------LLSGCPVLEELSL---LNLAWDRWDSC 206
Query: 257 DVVTPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQY-NAVADVTVFERSNVLHEASV 315
V + L+RL + C H N V + P + ++++Y + +A+ + L EAS+
Sbjct: 207 SVSSKILKRLTL-YCAHSSRNPKSVSFDTPNV--VYFEYSDNIANKYPKVNFDSLVEASI 263
Query: 316 DFVLVMSKNDKVS----------MDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMC 365
+ M+K K + + + +A + + G+ ++L L T+E ++C
Sbjct: 264 G--IRMTKVQKANARYVSDVDEETEMVGNATDLLMGICNVKTLYLSYDTLE----TLNLC 317
Query: 366 SSPWLQMLSNSNFYIEPLYNLKSLELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNK 425
+ P++N + + + L L +S P L TL+ + + H
Sbjct: 318 CQ------------VIPVFNNLTHLTIESHPELGWESLPNLLKSCPNLGTLVFQGLLHKA 365
Query: 426 FDRKQWNKDLDMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLDCENEVTLAKFLLKNG 485
DR D+ M E + +K L+ LK E + D E E+ K L+
Sbjct: 366 TDR---CGDVCMCQGLENSHSCLSSSPVK-CLKILKFGETNDDDDMEIEMEQIKNFLEKM 421
Query: 486 KALEEMVYF 494
LE+++ +
Sbjct: 422 PNLEQLIIY 430
>dbj|BAC43598.1| unknown protein [Arabidopsis thaliana] gi|30694943|ref|NP_191480.2|
F-box family protein [Arabidopsis thaliana]
Length = 484
Score = 73.9 bits (180), Expect = 1e-11
Identities = 123/489 (25%), Positives = 204/489 (41%), Gaps = 84/489 (17%)
Query: 25 DRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSSRNLQS 84
D I+ LPD +L ILS L K AA TS+LSKRW++L+ P+LDF + P +Q
Sbjct: 7 DIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVL-PSLHPEVAMQD 65
Query: 85 SDFETSGHPLASTMDFITQVLSTRDKDSDIR-ALCFRARLSFSRLNSLIRSAVRHNVKEL 143
D S +DF+ +VL R KD + +L + + I + +RH V +L
Sbjct: 66 QD-------QTSFIDFVDRVLKLRGKDHINKFSLKCGDGIEDEDVFPWILNTLRHGVSDL 118
Query: 144 DIEVTPEVRTDEYFNFPRCLIASKTLRVLKL--RSGFRLPPSSIMKETFQSLHTLSLTLG 201
+ V+P + + P + ASKTL LK+ + G P + L TL+L
Sbjct: 119 SLHVSPSL----VYWLPSKVFASKTLVRLKIGPKDG---PRVKLRNVCLPKLKTLNLD-- 169
Query: 202 PVDHQAPLSDLFTESAFPFLRNLHLQLCFGLRVLRVGCLALRDLSLEKCINL-----HGL 256
S +F E F + L GC L +LSL +NL
Sbjct: 170 --------SVVFEEGKIGFAK------------LLSGCPVLEELSL---LNLAWDRWDSC 206
Query: 257 DVVTPKLERLRVSECFHGYHNKSWVRINAPKLESLFWQY-NAVADVTVFERSNVLHEASV 315
V + L+RL + C H N V + P + ++++Y + +A+ + L EAS+
Sbjct: 207 SVSSKILKRLTL-YCAHSSRNPKSVSFDTPNV--VYFEYSDNIANKYPKVNFDSLVEASI 263
Query: 316 DFVLVMSKNDKVS----------MDKLQSAINFMAGLSCARSLTLDSKTIELQKRITSMC 365
+ M+K K + + + +A + + G+ ++L L T+E ++C
Sbjct: 264 G--IRMTKVQKANARYVSDVDEETEMVGNATDLLMGICNVKTLYLSYDTLE----TLNLC 317
Query: 366 SSPWLQMLSNSNFYIEPLYNLKSLELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNK 425
+ P++N + + + L L +S P L TL+ + + H
Sbjct: 318 CQ------------VIPVFNNLTHLTIESHPELGWESLPNLLKSCPNLGTLVFQGLLHKA 365
Query: 426 FDRKQWNKDLDMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLDCENEVTLAKFLLKNG 485
DR D+ M E + +K L+ LK E + D E E+ K L+
Sbjct: 366 TDR---CGDVCMCQGLENSHSCLSSSPVK-CLKILKFGETNDDDDMEIEMEQIKNFLEKM 421
Query: 486 KALEEMVYF 494
LE+++ +
Sbjct: 422 PNLEQLIIY 430
>dbj|BAB11672.1| unnamed protein product [Arabidopsis thaliana]
Length = 450
Score = 73.6 bits (179), Expect = 1e-11
Identities = 110/485 (22%), Positives = 204/485 (41%), Gaps = 95/485 (19%)
Query: 20 KAAATDRISDLPDAVLHHILSLLPIKTAAQTSILSKRWKFLWTTFPDLDFRTIDPHAFSS 79
+ + DRIS LPD +L ILS LP + A TSILS RWK LW + P LD ID AF
Sbjct: 8 RRSGEDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLD---IDIDAFDD 64
Query: 80 RNLQSSDFETSGHPLASTMDFITQVLSTRDKDSDIRALCFRARLSFSRLNSL---IRSAV 136
+ + F T+ L + KDS + L ++ + ++ I AV
Sbjct: 65 --------------ATTFISFATRFLDS-FKDSCLHKLQISFQMEAVDMWTIIPWIEDAV 109
Query: 137 RHNVKELDIEVTPEVRTDEYFNFPRCLIASKTLRVLKL------RSGFRLPPSSIMKETF 190
+ ++ L+++ + D P + S++L L+L R F P+ +
Sbjct: 110 KRRIQHLEVDSRIDHMID---TLPLTVYLSESLVSLRLHLVMLHRFVFVSLPNLKVMHLE 166
Query: 191 QSLHTLSLTLGPVDHQAPLSDLFTESAFPFLRNLHLQLCFGLRVLRVGCLALRDLSLEKC 250
+++++ + T+ P+ + T +RN+ +VLRV +L L L
Sbjct: 167 ENIYSYAETMEKFISSCPVLEDLT-----VVRNVDEAT---EKVLRVSSQSLNSLKLV-- 216
Query: 251 INLHGLDVVTPKLERLRVSECFHGYHNKSW-VRINAPKLESLFWQYNAVADVTVFERSNV 309
+ S+C++ + W V I+AP+L L + + + +N+
Sbjct: 217 ---------------IDSSKCWYNDDSDDWKVVIDAPQLVYLSLKDDQSVSFVI---NNL 258
Query: 310 LHEASVDFVLVMSKNDKVSMDKLQSAIN---FMAGLSCARSLTLDSKTIELQKRITSMCS 366
A D + + +D +++ N F+ GLS R +T+ T+++ +C
Sbjct: 259 CSSAKADIKVSFNVSDIWDLEESFERSNVGKFLTGLSSLRDMTISGTTLKI------ICH 312
Query: 367 SPWLQMLSNSNFYIEPLYNLKSL-ELHTCFNKTNIQGLACLFRSSPTLHTLIVKIIDHNK 425
+L+ EP+ +++ LH F +++ L C+ S P L +L++K+
Sbjct: 313 --YLKH--------EPMPQFRNMTRLHAKFYVCDLEMLPCVLESCPNLKSLVLKLKGE-- 360
Query: 426 FDRKQWNKDLDMTSNEEEQYWESEIPTLKPFLQHLKVVEIHGFLDCENEVTLAKFLLKNG 485
NEE S L+ L++++++ + E+ L+K+ L+N
Sbjct: 361 ------------MENEEISLSSSVPKCLQSSLENVEIIRPN--YGSGEEMKLSKYFLENS 406
Query: 486 KALEE 490
L++
Sbjct: 407 LVLKK 411
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 818,809,494
Number of Sequences: 2540612
Number of extensions: 31628159
Number of successful extensions: 75450
Number of sequences better than 10.0: 498
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 74650
Number of HSP's gapped (non-prelim): 765
length of query: 529
length of database: 863,360,394
effective HSP length: 133
effective length of query: 396
effective length of database: 525,458,998
effective search space: 208081763208
effective search space used: 208081763208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0203.9