Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0199.3
         (462 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP52769.1| unknown protein [Oryza sativa (japonica cultivar-...    55  4e-06
gb|AAT77016.1| retrotransposable elements TNP2-like protein [Ory...    55  4e-06
emb|CAE04687.1| OSJNBb0018A10.16 [Oryza sativa (japonica cultiva...    54  1e-05
gb|AAD28689.1| putative TNP1-like transposon protein [Arabidopsi...    54  1e-05
ref|XP_471075.1| OSJNBb0089K24.1 [Oryza sativa (japonica cultiva...    53  2e-05
ref|NP_908868.1| B1151H08.15 [Oryza sativa (japonica cultivar-gr...    53  2e-05
gb|AAT85097.1| hypothetical protein [Oryza sativa (japonica cult...    53  2e-05
emb|CAD40847.3| OSJNBa0086B14.18 [Oryza sativa (japonica cultiva...    52  3e-05
ref|XP_474881.1| OSJNBa0021F22.8 [Oryza sativa (japonica cultiva...    51  7e-05
dbj|BAD46100.1| hypothetical protein [Oryza sativa (japonica cul...    51  7e-05
gb|AAX95210.1| transposon protein, putative, CACTA, En/Spm sub-c...    51  7e-05
gb|AAX95150.1| hypothetical protein LOC_Os11g14680 [Oryza sativa...    51  9e-05
emb|CAE05927.1| OSJNBa0034E24.21 [Oryza sativa (japonica cultiva...    48  6e-04
gb|AAM94291.1| hypothetical protein [Sorghum bicolor]                  48  6e-04
gb|AAP53063.1| hypothetical protein [Oryza sativa (japonica cult...    46  0.003
emb|CAD74344.1| probable aminopeptidase [Rhodopirellula baltica ...    46  0.003
ref|NP_918327.1| B1110C07.18 [Oryza sativa (japonica cultivar-gr...    46  0.003
gb|AAM74354.1| Hypothetical protein [Oryza sativa (japonica cult...    46  0.003
emb|CAE01965.2| OSJNBa0085H03.6 [Oryza sativa (japonica cultivar...    45  0.004
gb|AAF26995.1| hypothetical protein [Arabidopsis thaliana]             45  0.004

>gb|AAP52769.1| unknown protein [Oryza sativa (japonica cultivar-group)]
           gi|37532360|ref|NP_920482.1| unknown protein [Oryza
           sativa (japonica cultivar-group)]
           gi|20270086|gb|AAM18174.1| Unknown protein [Oryza sativa
           (japonica cultivar-group)]
          Length = 897

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 100/468 (21%), Positives = 169/468 (35%), Gaps = 56/468 (11%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           + Q  A      S C S E   P  P I P       EG   C+L     PT   +VA G
Sbjct: 406 RVQHDASPSQHRSSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEG 464

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     I T+ DA  TF+ WP
Sbjct: 465 MAFKPSVTDKVHGADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWP 523

Query: 131 KR-LVSTMTPASS-------DNNHKATSRAKGITAVQAKKPAGQVKKPAERANK--PVAQ 180
           K  +V  MTP  S        N+  +    +G        P G     A+ A    P+  
Sbjct: 524 KEDIVVKMTPRPSRPTELTPPNSKLSIEAPRGPALSVPHSPGGADMDLADIAQSLAPIKT 583

Query: 181 GEKVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSKDKLQNCKF----- 235
             K  + +   V   K++ G+GK      + +  K     P+  S K      +F     
Sbjct: 584 TRKA-DSSPPLVKGQKRERGKGKVGELAPEPKRGKAATSMPVSKSGKVVRAPAQFELGMP 642

Query: 236 --------VWAYA-----RSVLKSEDLLKIPMPENILNTNTEEEFVEQ-----IGEEQVN 277
                   V   A     +  ++  +  +     +I+  +  + F+       IG + + 
Sbjct: 643 LVEDNVLAVMGIACRELHKQYMELSNAKRKMRESSIVGHHDHQPFLSSPAYITIGFDDLF 702

Query: 278 EIYYHTKLSASVICVYMRFLYSEVLVQNQLTERFFFLSPH-----NLSAYESRVSQYIAD 332
           +++   KL   ++  Y    + E     +   +  FL P      NL    + V  Y+  
Sbjct: 703 DLFRIRKLDTGLLKCYSLLCWIE---SRRHGNQVGFLDPSMVNEVNLRQSFTEVVDYVNR 759

Query: 333 ALKQNEQPNRVTFAPYNMGDHWVLLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMI 392
            L  ++    +  A +N   HW+LLVI      + Y +S   +  D   +    +     
Sbjct: 760 CLWAHQDKEYIMCA-HNQERHWILLVIVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGP 818

Query: 393 YHANSNDVPKKKVKYIKWRKMKCPKQKNLTDCGYYVLKYMRDIIIAGD 440
           Y        + K +     K  C +Q     CG++V   M  +++  D
Sbjct: 819 YVEKGGRHKEGKNELYHDTKFACAQQIG-DQCGFHVCHNMSTLVVQVD 865


>gb|AAT77016.1| retrotransposable elements TNP2-like protein [Oryza sativa
           (japonica cultivar-group)]
          Length = 876

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 100/464 (21%), Positives = 167/464 (35%), Gaps = 56/464 (12%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           + Q  A      S C S E   P  P I P       EG   C+L     PT   +VA G
Sbjct: 406 RVQHDASPSQHRSSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEG 464

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     I T+ DA  TF+ WP
Sbjct: 465 MAFKPSVTDKVHGADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWP 523

Query: 131 KR-LVSTMTPASSDNNHKATSRAK-------GITAVQAKKPAGQVKKPAERANK--PVAQ 180
           K  +V  MTP  S        ++K       G        P G     A+ A    P+  
Sbjct: 524 KEDIVVKMTPRPSRPTELTPPKSKLSIEAPRGPALSVPHSPGGADMDLADIAQSLAPIKT 583

Query: 181 GEKVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSKDKLQNCKF----- 235
             K  + +   V   K++ G+GK      + +  K     P+  S K      +F     
Sbjct: 584 TRKA-DSSPPLVKGQKRERGKGKVGELAPEPKRGKAATSMPVSKSGKVVRAPAQFELGMP 642

Query: 236 --------VWAYA-----RSVLKSEDLLKIPMPENILNTNTEEEFVEQ-----IGEEQVN 277
                   V   A     +  ++  +  +     +I+  +  + F+       IG + + 
Sbjct: 643 LVEDNVLAVMGIACRELHKQYMELSNAKRKMRESSIVGHHDHQPFLSSPAYITIGFDDLF 702

Query: 278 EIYYHTKLSASVICVYMRFLYSEVLVQNQLTERFFFLSPH-----NLSAYESRVSQYIAD 332
           +++   KL   ++  Y    + E     +   +  FL P      NL    + V  Y+  
Sbjct: 703 DLFRIRKLDTGLLKCYSLLCWIE---SRRHGNQVGFLDPSMVNEVNLRQSFTEVVDYVNR 759

Query: 333 ALKQNEQPNRVTFAPYNMGDHWVLLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMI 392
            L  ++    +  A +N   HW+LLVI      + Y +S   +  D   +    +    +
Sbjct: 760 CLWAHQDKEYIMCA-HNQERHWILLVIVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGL 818

Query: 393 YHANSNDVPKKKVKYIKWRKMKCPKQKNLTDCGYYVLKYMRDII 436
           Y        + K K     K  C +Q     CG++V   M  ++
Sbjct: 819 YVEKGGRHKEGKNKLYHDTKFACAQQIG-DQCGFHVCHNMSTLL 861


>emb|CAE04687.1| OSJNBb0018A10.16 [Oryza sativa (japonica cultivar-group)]
           gi|50922693|ref|XP_471707.1| OSJNBb0018A10.16 [Oryza
           sativa (japonica cultivar-group)]
          Length = 858

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 95/441 (21%), Positives = 158/441 (35%), Gaps = 60/441 (13%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           + Q  A      S C S E   P  P I P       EG+  C+L     PT   +VA G
Sbjct: 406 RVQHDASPSQHRSSCASTEVPAPGLP-IAPLAAVDHIEGVAQCVLLARVHPTFAPEVAEG 464

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     I T+ DA  TF+ WP
Sbjct: 465 MAFKPSVTDKVHGADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWP 523

Query: 131 KR-LVSTMTPASSDNNHKATSRAK-------GITAVQAKKPAGQVKKPAERANK--PVAQ 180
           K  +V  MTP  S        ++K       G        P G     A+ A    P+  
Sbjct: 524 KEDIVVKMTPRPSRPTELTPPKSKLSIEAPRGPALSVPHSPGGADMDLADIAQSLAPIKT 583

Query: 181 GEKVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSKDKLQNCKFVWAYA 240
             K  + +   V   K++ G+GK      + +  K     P+  S K             
Sbjct: 584 TRKA-DSSPPLVKGQKRERGKGKVGELAPEPKRGKAATSMPVSKSGK------------- 629

Query: 241 RSVLKSEDLLKIPMPENILNTNTEEEFVEQIGEEQVNEIYYHTKLSASVICVYMRFLYSE 300
             V+++    ++ MP        E+  +  +G + +  ++   KL   ++  Y    + E
Sbjct: 630 --VVRAPAQFELGMP------LVEDNVLAVMGFDDLFNLFRIRKLDTGLLKCYSLLCWIE 681

Query: 301 VLVQNQLTERFFFLSPH-----NLSAYESRVSQYIADALKQNEQPNRVTFAPYNMGDHWV 355
                +   +  FL P      NL    + V  Y+   L  ++    +         HW+
Sbjct: 682 ---SRRHGNQVGFLDPSMVNEVNLRQSFTEVVDYVNRCLWAHQDKEYIM-------RHWI 731

Query: 356 LLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMIYHANSNDVPKKKVKYIKWRKMKC 415
           LLVI      + Y +S   +  D   +    +     Y        + K +     K  C
Sbjct: 732 LLVIVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGPYVEKGGRHKEGKNELYHDTKFAC 791

Query: 416 PKQKNLTDCGYYVLKYMRDII 436
            +Q     CG++V   M  ++
Sbjct: 792 AQQIG-DQCGFHVCHNMSTLL 811


>gb|AAD28689.1| putative TNP1-like transposon protein [Arabidopsis thaliana]
           gi|25411455|pir||A84503 probable TNP1-like transposon
           protein [imported] - Arabidopsis thaliana
          Length = 984

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 34/287 (11%)

Query: 1   MRQELNDLRNLVHELMKNSGQAQKKADVQPGDSPCYSGEGSCPPSPVILPEGINACILYL 60
           +++++N+L+ ++ E MKN  Q+   A+V         GE S   S  +       C L  
Sbjct: 654 LQKKVNELQEVI-EKMKNQRQS---AEV---------GENSAARS--VNKRTQPKCFLLD 698

Query: 61  ATPTHRKVASGTMYNNSIDTL-HSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTI 119
              ++ KVA G + ++    L + C L    VKV ++  IE E   + P      N+FTI
Sbjct: 699 WAGSYAKVAEGCIISSDPGELVNDCRLGPTDVKVLIDTVIEPEAFLWRPA----ANMFTI 754

Query: 120 EDAIGTFVAWPKRL-VSTMTPASSDNNHKATSRAKGITAVQAKKPAGQVKKPAERANKPV 178
           E A+G  +AWP  + VS       ++N   TS A+G + ++A    G+      ++   V
Sbjct: 755 EKAVGHMIAWPAAMCVSLEEDLQQEDNAGQTSAARGKSPLEAATLVGKFAASVGKSAGSV 814

Query: 179 AQGEKVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSKDKLQNCKFVWA 238
            +       ++K V  GK      + A    K   +  T       ++  K    K +  
Sbjct: 815 GKS----AGSEKAVASGKAAASSSQTAAAGYKPSPEISTAKGTKSVATVSKAIAEKSIAK 870

Query: 239 YARSVLKSEDLLKIPMP---------ENILNTNTEEEFVEQIGEEQV 276
            ++S +K   LL   +P           ++  N + + ++  G +QV
Sbjct: 871 GSKSPVKKSQLLDSQLPLSRSPHKGVAEVIKANQKCKLMDISGRKQV 917


>ref|XP_471075.1| OSJNBb0089K24.1 [Oryza sativa (japonica cultivar-group)]
           gi|21740605|emb|CAD39392.1| OSJNBb0089K24.1 [Oryza
           sativa (japonica cultivar-group)]
          Length = 876

 Score = 53.1 bits (126), Expect = 2e-05
 Identities = 97/452 (21%), Positives = 163/452 (35%), Gaps = 56/452 (12%)

Query: 33  SPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASGTMYNNSI-DTLH 82
           S C S E   P  P I P       EG   C+L     PT   +VA G  +  S+ D +H
Sbjct: 418 SSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEGMAFKPSVTDKVH 476

Query: 83  SCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWPKR-LVSTMTPAS 141
              L + + KVS++   +      +PVP     I T+ DA  TF+ WPK  +V  MTP  
Sbjct: 477 GADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWPKEDIVVKMTPRP 535

Query: 142 SDNNHKATSRAK-------GITAVQAKKPAGQVKKPAERANK--PVAQGEKVHEQAKKQV 192
           S        ++K       G        P G     A+ A    P+    K  + +   V
Sbjct: 536 SRPTELTPPKSKLSIEAPRGPALSVPHSPGGADMDLADIAQSLAPIKTTRKA-DSSPPLV 594

Query: 193 DKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSKDKLQNCKF-------------VWAY 239
              K++ G+GK      + +  K     P+  S K      +F             V   
Sbjct: 595 KGQKRERGKGKVGELAPEPKRGKAATSMPVSKSGKVVRAPAQFELGMPLVEDNVLAVMGI 654

Query: 240 A-----RSVLKSEDLLKIPMPENILNTNTEEEFVEQ-----IGEEQVNEIYYHTKLSASV 289
           A     +  ++  +  +     +I+  +  + F+       IG + + +++   KL   +
Sbjct: 655 ACRELHKQYMELSNAKRKMRESSIVGHHDHQPFLSSPAYITIGFDDLFDLFRIRKLDTGL 714

Query: 290 ICVYMRFLYSEVLVQNQLTERFFFLSPH-----NLSAYESRVSQYIADALKQNEQPNRVT 344
           +  Y    + E     +   +  FL P      NL    + V  Y+   L  ++    + 
Sbjct: 715 LKCYSLLCWIE---SRRHGNQVGFLDPSMVNEVNLQQSSTEVVDYVNRCLWAHQDKEYIM 771

Query: 345 FAPYNMGDHWVLLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMIYHANSNDVPKKK 404
            A +N   HW+LLVI      + Y +S   +  D   +    +     Y        + K
Sbjct: 772 CA-HNQERHWILLVIVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGPYVEKGGRHKEGK 830

Query: 405 VKYIKWRKMKCPKQKNLTDCGYYVLKYMRDII 436
            +     K  C +Q     CG++V   M  ++
Sbjct: 831 NELYHDTKFACAQQIG-DQCGFHVCHNMSTLL 861


>ref|NP_908868.1| B1151H08.15 [Oryza sativa (japonica cultivar-group)]
          Length = 876

 Score = 53.1 bits (126), Expect = 2e-05
 Identities = 97/452 (21%), Positives = 163/452 (35%), Gaps = 56/452 (12%)

Query: 33  SPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASGTMYNNSI-DTLH 82
           S C S E   P  P I P       EG   C+L     PT   +VA G  +  S+ D +H
Sbjct: 418 SSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEGMAFKPSVTDKVH 476

Query: 83  SCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWPKR-LVSTMTPAS 141
              L + + KVS++   +      +PVP     I T+ DA  TF+ WPK  +V  MTP  
Sbjct: 477 GADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWPKEDIVVKMTPRP 535

Query: 142 SDNNHKATSRAK-------GITAVQAKKPAGQVKKPAERANK--PVAQGEKVHEQAKKQV 192
           S        ++K       G        P G     A+ A    P+    K  + +   V
Sbjct: 536 SRPTELTPPKSKLSIEAPRGPALSVPHSPGGADMDLADIAQSLAPIKTTRKA-DSSPPLV 594

Query: 193 DKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSKDKLQNCKF-------------VWAY 239
              K++ G+GK      + +  K     P+  S K      +F             V   
Sbjct: 595 KGQKRERGKGKVGELAPEPKRGKAATSMPVSKSGKVVRAPAQFELGMPLVEDNVLAVMGI 654

Query: 240 A-----RSVLKSEDLLKIPMPENILNTNTEEEFVEQ-----IGEEQVNEIYYHTKLSASV 289
           A     +  ++  +  +     +I+  +  + F+       IG + + +++   KL   +
Sbjct: 655 ACRELHKQYMELSNAKRKMRESSIVGHHDHQPFLSSPAYITIGFDDLFDLFRIRKLDTGL 714

Query: 290 ICVYMRFLYSEVLVQNQLTERFFFLSPH-----NLSAYESRVSQYIADALKQNEQPNRVT 344
           +  Y    + E     +   +  FL P      NL    + V  Y+   L  ++    + 
Sbjct: 715 LKCYSLLCWIE---SRRHGNQVGFLDPSMVNEVNLQQSSTEVVDYVNRCLWAHQDKEYIM 771

Query: 345 FAPYNMGDHWVLLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMIYHANSNDVPKKK 404
            A +N   HW+LLVI      + Y +S   +  D   +    +     Y        + K
Sbjct: 772 CA-HNQERHWILLVIVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGPYVEKGGRHKEGK 830

Query: 405 VKYIKWRKMKCPKQKNLTDCGYYVLKYMRDII 436
            +     K  C +Q     CG++V   M  ++
Sbjct: 831 NELYHDTKFACAQQIG-DQCGFHVCHNMSTLL 861


>gb|AAT85097.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 815

 Score = 53.1 bits (126), Expect = 2e-05
 Identities = 89/376 (23%), Positives = 140/376 (36%), Gaps = 51/376 (13%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           + Q  A      S C S E   P  P I P       EG   C+L     PT   +VA G
Sbjct: 406 RVQHDASPSQHRSSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEG 464

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     I T+ DA  TF+ WP
Sbjct: 465 MAFKPSVTDKVHGADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWP 523

Query: 131 KR-LVSTMTPASSDNNHKATSRAK-------GITAVQAKKPAGQVKKPAERANK--PVAQ 180
           K  +V  MTP  S        ++K       G        P G     A+ A    P+  
Sbjct: 524 KEDIVVKMTPRPSRPTELTPPKSKLSIEAPRGPALSVPHSPGGADMDLADIAQSLAPIKT 583

Query: 181 GEKVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSKDKLQNCKFVWAYA 240
             K  + +   V   K++ G+GK      + +  K     PL +++K K++    V  + 
Sbjct: 584 TRKA-DSSPPLVKGQKRERGKGKVGELAPEPKRGKAATSMPL-SNAKRKMRESSIVGHHD 641

Query: 241 RSVLKSEDLLKIPMPENILNTNTEEEFVEQIGEEQVNEIYYHTKLSASVICVYMRFLYSE 300
                S        P  I            IG + + +++   KL   ++  Y    + E
Sbjct: 642 HQPFLSS-------PAYI-----------TIGFDDLFDLFRIRKLDTGLLKCYSLLCWIE 683

Query: 301 VLVQNQLTERFFFLSPH-----NLSAYESRVSQYIADALKQNEQPNRVTFAPYNMGDHWV 355
                +   +  FL P      NL    + V  Y+   L  ++    +  A +N   HW+
Sbjct: 684 ---SRRHGNQVGFLDPSMVNEVNLRQSFTEVVDYVNRCLWAHQDKEYIMCA-HNQERHWI 739

Query: 356 LLVIYTSEFAIEYFDS 371
           LLVI      + Y +S
Sbjct: 740 LLVIVPKWSRVTYLNS 755


>emb|CAD40847.3| OSJNBa0086B14.18 [Oryza sativa (japonica cultivar-group)]
           gi|50924640|ref|XP_472676.1| OSJNBa0086B14.18 [Oryza
           sativa (japonica cultivar-group)]
          Length = 876

 Score = 52.4 bits (124), Expect = 3e-05
 Identities = 99/464 (21%), Positives = 166/464 (35%), Gaps = 56/464 (12%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           + Q  A      S C S E   P  P I P       EG   C+L     PT   +VA G
Sbjct: 406 RVQHDASPSQHRSSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEG 464

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     I T+ DA  TF+ WP
Sbjct: 465 MAFKPSVTDKVHGADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWP 523

Query: 131 KR-LVSTMTPASSDNNHKATSRAK-------GITAVQAKKPAGQVKKPAERANK--PVAQ 180
           K  +V  MTP  S        ++K       G        P G     A+ A    P+  
Sbjct: 524 KEDIVVKMTPRPSRPTELTPPKSKLSIEAPRGPALSVPHSPGGADMDLADIAQSLAPIKT 583

Query: 181 GEKVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSKDKLQNCKF----- 235
             K  + +   V   K++ G+GK      + +  K     P+  S K      +F     
Sbjct: 584 TRKA-DSSPPLVKGQKRERGKGKVGELAPEPKRGKAATSMPVSKSGKVVRAPAQFELGMP 642

Query: 236 --------VWAYA-----RSVLKSEDLLKIPMPENILNTNTEEEFVEQ-----IGEEQVN 277
                   V   A     +  ++  +  +     +I+  +  + F+       IG + + 
Sbjct: 643 LVEDNVLAVMGIACRELHKQYMELSNAKRKMRESSIVGHHDHQPFLSSPAYITIGFDDLF 702

Query: 278 EIYYHTKLSASVICVYMRFLYSEVLVQNQLTERFFFLSPH-----NLSAYESRVSQYIAD 332
           +++   KL   ++  Y    + E     +   +  FL P      NL    + V  Y+  
Sbjct: 703 DLFRIRKLDTGLLKCYSLLCWIE---SRRHGNQVGFLDPSMVNEVNLQQSFTEVVDYVNR 759

Query: 333 ALKQNEQPNRVTFAPYNMGDHWVLLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMI 392
            L  ++    +  A +N   HW+LLVI      + Y +S   +  D   +    +     
Sbjct: 760 CLWAHQDKEYIMCA-HNQERHWILLVIVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGP 818

Query: 393 YHANSNDVPKKKVKYIKWRKMKCPKQKNLTDCGYYVLKYMRDII 436
           Y        + K +     K  C +Q     CG++V   M  ++
Sbjct: 819 YVEKGGRHKEGKNELYHDTKFACAQQIG-DQCGFHVCHNMSTLL 861


>ref|XP_474881.1| OSJNBa0021F22.8 [Oryza sativa (japonica cultivar-group)]
           gi|38346475|emb|CAE03714.2| OSJNBa0021F22.8 [Oryza
           sativa (japonica cultivar-group)]
          Length = 839

 Score = 51.2 bits (121), Expect = 7e-05
 Identities = 95/445 (21%), Positives = 166/445 (36%), Gaps = 55/445 (12%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           + Q  A      S C S E   P  P I P       EG   C+L     PT   +VA G
Sbjct: 406 RVQHDASPSQHRSSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEG 464

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     I T+ DA  TF+ WP
Sbjct: 465 MAFKPSVTDKVHGADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWP 523

Query: 131 KR-LVSTMTPASSDNNHKATSRAKGITAVQAKKPAGQVKKPAERANKPVAQGEKVHEQAK 189
           K  +V  MTP          + A+ +  ++  + A         ++ P+ +G+K  E+ K
Sbjct: 524 KEDIVVKMTP--------RPNIAQSLAPIKTTRKAD--------SSPPLVKGQK-RERGK 566

Query: 190 KQVDKGKKDVGQGKRAPGQAKKQADKGTEIQ---PLGASSKDKLQNCKFVWAYA-----R 241
            +V +   +  +GK A      ++ K         LG    +   N   V   A     +
Sbjct: 567 GKVGELAPEPKRGKAATSMPVSKSGKVVRAPAQFELGMPLVE--DNVLAVMGIACRELHK 624

Query: 242 SVLKSEDLLKIPMPENILNTNTEEEFVEQ-----IGEEQVNEIYYHTKLSASVICVYMRF 296
             ++  +  +     +I+  +  + F+       IG + + +++   KL   ++  Y   
Sbjct: 625 QYMELSNAKRKMRESSIVGHHDHQPFLSSPAYITIGFDDLFDLFRIRKLDTGLLKCYSLL 684

Query: 297 LYSEVLVQNQLTERFFFLSPH-----NLSAYESRVSQYIADALKQNEQPNRVTFAPYNMG 351
            + E     +   +  FL P      NL    + V  Y+   L  + Q        +N  
Sbjct: 685 CWIE---SRRHGNQVGFLDPSMVNEVNLQQSFTEVVDYVNRCLWAH-QDKEYIMCVHNQE 740

Query: 352 DHWVLLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMIYHANSNDVPKKKVKYIKWR 411
            HW+LLVI      + Y +S   +  D   +    +     Y        + K +     
Sbjct: 741 RHWILLVIVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGPYVEKGGRHKEGKNELYHDT 800

Query: 412 KMKCPKQKNLTDCGYYVLKYMRDII 436
           K  C +Q     CG++V   M  ++
Sbjct: 801 KFACAQQIG-DQCGFHVCHNMSTLL 824


>dbj|BAD46100.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 290

 Score = 51.2 bits (121), Expect = 7e-05
 Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 10/152 (6%)

Query: 291 CVYMRFLYSEVLVQNQLTERFFFLSPHNLSAYESR--------VSQYIADALKQNEQPNR 342
           C+  +  ++  L + +L E    ++P    AY ++        V+ Y+A AL ++ Q   
Sbjct: 68  CMISKPNHTYTLDEKKLPEHIKVMTPEERKAYIAQKHLEKMLDVATYVAIAL-ESMQDKE 126

Query: 343 VTFAPYNMGDHWVLLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMIYHANSNDVPK 402
             +APY   D W++ ++Y     +   DS D +         I D     Y+        
Sbjct: 127 CVYAPYAFDDQWIVFLLYPKYNEVIVLDSLDKDSNTYQEFLRIIDLAFKRYYQRGEQRKN 186

Query: 403 KKVKYIKWRKMKCPKQK-NLTDCGYYVLKYMR 433
            + +     K  C KQ   +  CGYY  +++R
Sbjct: 187 SRERIFVRNKWPCHKQPVGIVLCGYYCSEFLR 218


>gb|AAX95210.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           (japonica cultivar-group)]
          Length = 876

 Score = 51.2 bits (121), Expect = 7e-05
 Identities = 98/464 (21%), Positives = 166/464 (35%), Gaps = 56/464 (12%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           + Q  A      S C S E   P  P I P       EG   C+L     PT   +VA G
Sbjct: 406 RVQHDASPSQHRSSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEG 464

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     I T+ DA  TF+ WP
Sbjct: 465 MAFKPSVTDKVHGADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWP 523

Query: 131 KR-LVSTMTPASSDNNHKATSRAK-------GITAVQAKKPAGQVKKPAERANK--PVAQ 180
           K  +V  MTP  S        ++K       G        P G     A+ A    P+  
Sbjct: 524 KEDIVVKMTPRPSRPTELTPPKSKLSFEAPRGPALSVPHSPGGADMDLADIAQSLAPIKT 583

Query: 181 GEKVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSKDKLQNCKF----- 235
             K  + +   V   K++ G+GK      + +  K     P+  S K      +F     
Sbjct: 584 TRKA-DSSPPLVKGQKRERGKGKVGELAPEPKRGKAATSMPVSKSGKVVRAPAQFELGMP 642

Query: 236 --------VWAYA-----RSVLKSEDLLKIPMPENILNTNTEEEFVEQ-----IGEEQVN 277
                   V   A     +  ++  +  +     +I+  +  + F+       +G + + 
Sbjct: 643 LVEDNVLAVMGIACRELHKQYMELSNAKRKMRESSIVGHHDHQPFLSSPAYITLGFDALF 702

Query: 278 EIYYHTKLSASVICVYMRFLYSEVLVQNQLTERFFFLSPH-----NLSAYESRVSQYIAD 332
           +++   KL   ++  Y    + E     +   +  FL P      NL    + V  Y+  
Sbjct: 703 DLFRIRKLDTGLLKCYSLLCWIE---SRRHGNQVGFLDPSMVNEVNLRQSFTEVVDYVNR 759

Query: 333 ALKQNEQPNRVTFAPYNMGDHWVLLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMI 392
            L  ++    +  A +N   HW+LLVI      + Y +S   +  D   +    +     
Sbjct: 760 CLWAHQDKEYIMCA-HNQERHWILLVIVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGP 818

Query: 393 YHANSNDVPKKKVKYIKWRKMKCPKQKNLTDCGYYVLKYMRDII 436
           Y        + K +     K  C +Q     CG++V   M  ++
Sbjct: 819 YVEKGGRHKEGKNELYHDTKFACAQQIG-DQCGFHVCHNMSTLV 861


>gb|AAX95150.1| hypothetical protein LOC_Os11g14680 [Oryza sativa (japonica
           cultivar-group)]
          Length = 178

 Score = 50.8 bits (120), Expect = 9e-05
 Identities = 34/145 (23%), Positives = 58/145 (39%), Gaps = 10/145 (6%)

Query: 298 YSEVLVQNQLTERFFFLSPHNLSAYESR--------VSQYIADALKQNEQPNRVTFAPYN 349
           ++  L + +L E    +S     AY ++        V+ Y+A AL ++ Q     +APY 
Sbjct: 18  HTYTLDEKKLPEHIKAMSSEERKAYVAQRHHEKVLDVATYVAIAL-ESTQDKECVYAPYA 76

Query: 350 MGDHWVLLVIYTSEFAIEYFDSFDGEPTDDVHMKNIFDAGLMIYHANSNDVPKKKVKYIK 409
             DHW++ ++Y     +   DS D +         I D     Y+         + +   
Sbjct: 77  FDDHWIVFLLYPKYNEVIVLDSLDKDSNTYQEFLRILDLAFKRYYQRGGQRKNSRERIFV 136

Query: 410 WRKMKCPKQK-NLTDCGYYVLKYMR 433
             K  C KQ      CGYY  +++R
Sbjct: 137 RNKWPCHKQPVGTVLCGYYYCEFLR 161


>emb|CAE05927.1| OSJNBa0034E24.21 [Oryza sativa (japonica cultivar-group)]
           gi|50923455|ref|XP_472088.1| OSJNBa0034E24.21 [Oryza
           sativa (japonica cultivar-group)]
          Length = 744

 Score = 48.1 bits (113), Expect = 6e-04
 Identities = 59/225 (26%), Positives = 90/225 (39%), Gaps = 21/225 (9%)

Query: 22  AQKKADVQPGDSPCYSGEGSCPPSPVILP------EGINACILYLAT-PTHR-KVASGTM 73
           AQ  A      S C S E   P  PV         EGI  C+L     PT   +VA G  
Sbjct: 332 AQHDASPSQHRSSCASTEVPAPGLPVAPLAAVDHIEGIAQCVLLARVHPTFAPEVAKGMA 391

Query: 74  YNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWPKR 132
           +  S+ D +H   L + + KVS++   +      +PVP     I T+ DA  TF+ WPK 
Sbjct: 392 FKPSVTDKVHGADLLARYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWPKE 450

Query: 133 -LVSTMTPASSDNNHKATSRAKGITAVQAKKPAGQVKKPAERANKPVA---------QGE 182
            +V  MTP  S        ++K ++    + PA  V      A+  +A         +  
Sbjct: 451 DIVVKMTPRPSRPTELTPPKSK-LSIEAPRGPALSVPHSPGGADMDLANIAQSLAPIKTT 509

Query: 183 KVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSK 227
           +  + +   V   K++ G+GK      + +  K     PL  + K
Sbjct: 510 RKADSSPPLVKGKKRERGKGKVGELAPEPKRGKAATSMPLSKAGK 554


>gb|AAM94291.1| hypothetical protein [Sorghum bicolor]
          Length = 769

 Score = 48.1 bits (113), Expect = 6e-04
 Identities = 47/164 (28%), Positives = 71/164 (42%), Gaps = 25/164 (15%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILPEGINACILYLATPTHRKVASGTMYNNSIDT 80
           QA+ +  VQ   S    G+G+  P  ++LP       +Y       KVA   +  N ID 
Sbjct: 334 QAEIQRQVQAALSQMTKGQGTSQPERLLLP----VSCMYQMGMQQTKVAIAVV--NPIDR 387

Query: 81  -----LHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGN-IFTIEDAIGTFVAWPKRLV 134
                +H+ P+P  +  VSV+   +G     +P+ IEGG+   T+ +A  TF+ W KR +
Sbjct: 388 RRTPRIHNRPVPGGYASVSVDRVEKG--CGNVPLDIEGGDGEKTLGEAEKTFICWRKRFI 445

Query: 135 --------STMTPASSDNNHKATSRAKGITAVQAKKPAGQVKKP 170
                   S ++P  S   H+A   A G  A     PA     P
Sbjct: 446 IIPQHRESSNLSPVLSPARHRA---AGGDNAGSPPTPAAATPTP 486


>gb|AAP53063.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|37532948|ref|NP_920776.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 424

 Score = 45.8 bits (107), Expect = 0.003
 Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 13/133 (9%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           +AQ  A      S C S E   P  P I P       EG   C++     PT   KVA G
Sbjct: 58  RAQHDASPSQHRSSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVILARVHPTFAPKVAEG 116

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     + T+ DA  TF+ WP
Sbjct: 117 MAFKPSVTDKVHGADLLARYAKVSIDTVKDTWSGYPLPVP-PNDELMTLGDARKTFIQWP 175

Query: 131 KR-LVSTMTPASS 142
           K  +V  MTP  S
Sbjct: 176 KEDIVVKMTPRPS 188


>emb|CAD74344.1| probable aminopeptidase [Rhodopirellula baltica SH 1]
           gi|32473810|ref|NP_866804.1| probable aminopeptidase
           [Rhodopirellula baltica SH 1]
          Length = 878

 Score = 45.8 bits (107), Expect = 0.003
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 160 AKKPAGQVKKPAERANKPVAQGEKVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEI 219
           A+K     K+ AE   K  A  +K  ++A K+ D+GKK  G+G++      K+ D+  E 
Sbjct: 796 AEKEKAAEKQKAEEEKKKAASADKPSDEASKKSDEGKKPKGEGEKDEPAKPKKKDEAAEA 855

Query: 220 QPLGASSKDKLQN 232
           +P  A  KDK +N
Sbjct: 856 EPKAA--KDKKEN 866


>ref|NP_918327.1| B1110C07.18 [Oryza sativa (japonica cultivar-group)]
          Length = 678

 Score = 45.8 bits (107), Expect = 0.003
 Identities = 60/227 (26%), Positives = 87/227 (37%), Gaps = 23/227 (10%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           + Q  A      S C S E   P  P I P       EG   C+L     PT   +VA G
Sbjct: 212 RVQHDASPSQHRSSCPSTEVPAPGLP-IAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEG 270

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     I T+ DA  TF+ WP
Sbjct: 271 MAFKPSVTDKVHGADLLAGYAKVSIDTVKDTWSGYPLPVP-PNDEIMTLGDARKTFIQWP 329

Query: 131 KR-LVSTMTPASSDNNHKATSRAK-------GITAVQAKKPAGQVKKPAERANK--PVAQ 180
           K  +V  MTP  S        ++K       G        P G     A+ A    P+  
Sbjct: 330 KEDIVVKMTPRPSRPTELTPPKSKLSIEAPRGPALSVPHSPGGADMDLADIAQSLAPIKT 389

Query: 181 GEKVHEQAKKQVDKGKKDVGQGKRAPGQAKKQADKGTEIQPLGASSK 227
             K  + +   V   K++ G+GK      + +  K     P+  S K
Sbjct: 390 TRKA-DSSPPLVKGQKRERGKGKVGELAPEPKRGKAATSMPVSKSGK 435


>gb|AAM74354.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 637

 Score = 45.8 bits (107), Expect = 0.003
 Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 13/133 (9%)

Query: 21  QAQKKADVQPGDSPCYSGEGSCPPSPVILP-------EGINACILYLAT-PTHR-KVASG 71
           +AQ  A      S C S E   P  P I P       EG   C++     PT   KVA G
Sbjct: 271 RAQHDASPSQHRSSCASTEVPAPGLP-IAPLAAVDHIEGAAQCVILARVHPTFAPKVAEG 329

Query: 72  TMYNNSI-DTLHSCPLPSDHVKVSVEFAIEGEEKSYIPVPIEGGNIFTIEDAIGTFVAWP 130
             +  S+ D +H   L + + KVS++   +      +PVP     + T+ DA  TF+ WP
Sbjct: 330 MAFKPSVTDKVHGADLLARYAKVSIDTVKDTWSGYPLPVP-PNDELMTLGDARKTFIQWP 388

Query: 131 KR-LVSTMTPASS 142
           K  +V  MTP  S
Sbjct: 389 KEDIVVKMTPRPS 401


>emb|CAE01965.2| OSJNBa0085H03.6 [Oryza sativa (japonica cultivar-group)]
           gi|50924258|ref|XP_472489.1| OSJNBa0085H03.6 [Oryza
           sativa (japonica cultivar-group)]
          Length = 835

 Score = 45.4 bits (106), Expect = 0.004
 Identities = 38/116 (32%), Positives = 49/116 (41%), Gaps = 8/116 (6%)

Query: 319 LSAYESRVSQYIADALKQNEQPNRVTFAPYNMGDHWVLLVIYTSEFAIEYFDSFD-GEPT 377
           L  Y       I   LK       +   PYN   HWVLL+   S   +  +DS D  E T
Sbjct: 682 LDQYPQATEDNIVHLLKAQHYKTFILL-PYNTEFHWVLLLFDLSACTVNVYDSMDKKEST 740

Query: 378 DDVHMKNIFDAGLMIYHANSNDVPKKKVKYIKWR-KMKCPKQKNLTD-CGYYVLKY 431
            D   + I  A     H     V  K  + ++W+ K  C KQK  T+ CGYYV +Y
Sbjct: 741 FDKVFELIDRAWYQFRHL----VRGKWRERLRWKFKFPCAKQKKGTNLCGYYVCEY 792


>gb|AAF26995.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 45.4 bits (106), Expect = 0.004
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 11/92 (11%)

Query: 345 FAPYNMGDHWVLLVIYTSEFAIEYFDSFDG-EPTDDVHMKNIFDAGLMIYHANSNDVPKK 403
           F P +M  HW L VI   +   +Y DSF G EP        I DA    +     D  + 
Sbjct: 361 FIPIHMNIHWTLAVINIKDQKFQYLDSFKGREP-------KILDALARYFVDEVRDKSEV 413

Query: 404 KVKYIKWRK---MKCPKQKNLTDCGYYVLKYM 432
            +   +WR+      P Q+N  DCG +++KY+
Sbjct: 414 DLDVSRWRQEFVQDLPMQRNGFDCGMFMVKYI 445


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.316    0.133    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 784,232,835
Number of Sequences: 2540612
Number of extensions: 34397943
Number of successful extensions: 104382
Number of sequences better than 10.0: 486
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 472
Number of HSP's that attempted gapping in prelim test: 103025
Number of HSP's gapped (non-prelim): 1278
length of query: 462
length of database: 863,360,394
effective HSP length: 132
effective length of query: 330
effective length of database: 527,999,610
effective search space: 174239871300
effective search space used: 174239871300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)


Lotus: description of TM0199.3