BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0197.8
(242 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cult... 107 3e-22
gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultiva... 107 3e-22
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 106 5e-22
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 105 1e-21
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 104 2e-21
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 104 2e-21
dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana] 102 7e-21
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 102 7e-21
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 102 1e-20
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 101 2e-20
ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana] 101 2e-20
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 101 2e-20
gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Ar... 100 4e-20
ref|NP_174828.1| AT hook motif-containing protein-related [Arabi... 100 4e-20
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 100 6e-20
gb|AAC28215.1| contains similarity to helicases [Arabidopsis tha... 98 2e-19
ref|NP_680578.1| hypothetical protein [Arabidopsis thaliana] 98 2e-19
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 98 2e-19
gb|AAD20107.1| putative helicase [Arabidopsis thaliana] gi|25353... 97 3e-19
ref|NP_912739.1| unnamed protein product [Oryza sativa (japonica... 96 9e-19
>gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37535030|ref|NP_921817.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1477
Score = 107 bits (267), Expect = 3e-22
Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 3 FFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FLNN 62
+ +R IL P + V +N Y++ I + YLS +S +S +S + T FLN+
Sbjct: 1261 YLEERAILCPVNENVNELNEYIMDQIQGDKVTYLSRDSVSKSVSYSHEMEMLYPTEFLNS 1320
Query: 63 TKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNANDK 122
G+ NH+L LKV +P+MLLRNI+Q+AGLCNGTR+ + LG + I A +ITGT++ D
Sbjct: 1321 LNHSGIPNHQLKLKVGLPVMLLRNINQSAGLCNGTRMTITRLGNKVIEAQIITGTHSGDM 1380
Query: 123 VHISIMDLVPSDPN--FQLNSEEDSFQLQYAL 152
V I + + P++P F LN ++ + +A+
Sbjct: 1381 VCIPQIIMSPTEPKWPFMLNRKQFPLSVCFAM 1412
>gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1501
Score = 107 bits (267), Expect = 3e-22
Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 3 FFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FLNN 62
+ +R IL P + V +N Y++ I + YLS +S +S +S + T FLN+
Sbjct: 1285 YLEERAILCPVNENVNELNEYIMDQIQGDKVTYLSRDSVSKSVSYSHEMEMLYPTEFLNS 1344
Query: 63 TKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNANDK 122
G+ NH+L LKV +P+MLLRNI+Q+AGLCNGTR+ + LG + I A +ITGT++ D
Sbjct: 1345 LNHSGIPNHQLKLKVGLPVMLLRNINQSAGLCNGTRMTITRLGNKVIEAQIITGTHSGDM 1404
Query: 123 VHISIMDLVPSDPN--FQLNSEEDSFQLQYAL 152
V I + + P++P F LN ++ + +A+
Sbjct: 1405 VCIPQIIMSPTEPKWPFMLNRKQFPLSVCFAM 1436
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 106 bits (265), Expect = 5e-22
Identities = 60/154 (38%), Positives = 91/154 (58%), Gaps = 2/154 (1%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P++ +R IL PT V +N Y++ I + YLS +S +S +S + T FL
Sbjct: 1355 PKYLEERAILCPTNDDVNELNEYIMDQIQGDKVTYLSHDSVSKSMSYSHEMEMLYPTEFL 1414
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ K G+ NH+L LKV +P+MLLRNI+Q AGLCNGTR+ + G+R I A +ITGT+
Sbjct: 1415 NSLKHPGIPNHQLKLKVGLPVMLLRNINQNAGLCNGTRMRITRFGKRVIEAEIITGTHIG 1474
Query: 121 DKVHISIMDLVPSDPN--FQLNSEEDSFQLQYAL 152
D V I + + P++ F LN ++ + +A+
Sbjct: 1475 DMVCIPQIIMSPNERKWPFVLNRKQFPLSVCFAM 1508
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 105 bits (262), Expect = 1e-21
Identities = 53/132 (40%), Positives = 82/132 (61%)
Query: 3 FFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FLNN 62
F R IL P + IN +++ MI E YLS ++ ++ + + T FLN+
Sbjct: 1419 FLEQRAILCPRNETAREINEFIMNMIEGEEITYLSCDTVCKATTNDSETDVLYPTEFLNS 1478
Query: 63 TKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNANDK 122
GM NH L LKV +P+MLLRNI+Q++GLCNGTR+ + +LG+R+I A +ITGT+ +K
Sbjct: 1479 LNFPGMPNHVLKLKVGLPVMLLRNINQSSGLCNGTRMTITQLGKRFIEAQIITGTHVGEK 1538
Query: 123 VHISIMDLVPSD 134
V+I + + P++
Sbjct: 1539 VYIPRIIMTPTE 1550
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 104 bits (260), Expect = 2e-21
Identities = 52/132 (39%), Positives = 82/132 (61%)
Query: 3 FFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FLNN 62
F R IL P + IN +++ MI E YLS ++ ++ + + T FLN+
Sbjct: 1310 FLEQRAILCPRNETARKINEFIMNMIEGEEITYLSCDTVCKATTNDSETDVLYPTEFLNS 1369
Query: 63 TKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNANDK 122
GM NH L LK+ +P+MLLRNI+Q++GLCNGTR+ + +LG+R+I A +ITGT+ +K
Sbjct: 1370 LNFPGMPNHVLKLKLGLPVMLLRNINQSSGLCNGTRMTITQLGKRFIEAQIITGTHVGEK 1429
Query: 123 VHISIMDLVPSD 134
V+I + + P++
Sbjct: 1430 VYIPRIIMTPTE 1441
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 104 bits (259), Expect = 2e-21
Identities = 56/132 (42%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 3 FFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FLNN 62
FF +R IL PT V +N +++ ++ EY SS+ + ++ S +T FLN
Sbjct: 1084 FFRERAILCPTNDDVSEVNNHIMDLLPGEVKEYFSSDK-ICDFDTSVERDANMSTEFLNA 1142
Query: 63 TKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNANDK 122
K G+ NH L LK+ +P+ML+RN+DQ GLCNGTRL V +LG+R I A V+TG+NA +K
Sbjct: 1143 IKCSGVPNHVLRLKLGVPVMLIRNLDQKYGLCNGTRLQVTQLGDRVIEAKVLTGSNAGNK 1202
Query: 123 VHISIMDLVPSD 134
V++ + L P+D
Sbjct: 1203 VYLPRLVLTPAD 1214
>dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 102 bits (255), Expect = 7e-21
Identities = 62/151 (41%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF DR IL PT V IN +ML + E Y SS+S S ++ +T FL
Sbjct: 1450 PKFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIYRSSDSIDPSDTRADK-NPVYTPDFL 1508
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N K G+ NH L LKV P+MLLRN+D GL NGTRL +V LG++ + ++TGT
Sbjct: 1509 NKIKISGLPNHLLWLKVGCPVMLLRNLDSHGGLMNGTRLQIVRLGDKLVQGRILTGTRVG 1568
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
V I M L PSD + F L A
Sbjct: 1569 KLVIIPRMPLTPSDRRLPFKMKRRQFPLSVA 1599
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 102 bits (255), Expect = 7e-21
Identities = 62/151 (41%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF DR IL PT V IN +ML + E Y SS+S S ++ +T FL
Sbjct: 1254 PKFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIYRSSDSIDPSDTRADK-NPVYTPDFL 1312
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N K G+ NH L LKV P+MLLRN+D GL NGTRL +V LG++ + ++TGT
Sbjct: 1313 NKIKISGLPNHLLWLKVGCPVMLLRNLDSHGGLMNGTRLQIVRLGDKLVQGRILTGTRVG 1372
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
V I M L PSD + F L A
Sbjct: 1373 KLVIIPRMPLTPSDRRLPFKMKRRQFPLSVA 1403
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 102 bits (253), Expect = 1e-20
Identities = 60/151 (39%), Positives = 82/151 (53%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF R IL PT + V IN YML + + E YLS++S + + + T FL
Sbjct: 1532 PKFFQRRAILAPTNEDVNTINQYMLEHLKSEERIYLSADS-IDPTDSDSLANPVITPDFL 1590
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ + GM +H L LKV P+MLLRN+D GLCNGTRL + +L ++ + A VIT
Sbjct: 1591 NSIQLTGMPHHALRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLAKQVVQAKVITRDRIG 1650
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
D V I +++L PSD F L A
Sbjct: 1651 DIVLIPLINLTPSDTKLPFKMRRRQFPLSVA 1681
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 101 bits (251), Expect = 2e-20
Identities = 60/151 (39%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF R IL P + V IN YML + + E YLS++S S + + T FL
Sbjct: 1209 PKFFQRRAILAPKNEDVNTINQYMLEHLDSEERIYLSADSIDPS-DSDSLKNPVITPDFL 1267
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ K GM +H L LKV P+MLLRN+D GLCNGTRL + +L + A VITG
Sbjct: 1268 NSIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCSHIVEAKVITGDRIG 1327
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
V+I ++++ PSD F L A
Sbjct: 1328 QIVYIPLINITPSDTKLPFKMRRRQFPLSVA 1358
>ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana]
Length = 1033
Score = 101 bits (251), Expect = 2e-20
Identities = 60/151 (39%), Positives = 81/151 (52%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF R IL PT + V IN Y+L + A E YLS++S + + + + T FL
Sbjct: 813 PKFFQGRAILAPTNEDVNTINEYLLEQLHAEERIYLSADS-IDPTDSNSLNNPVITPDFL 871
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ K G+ NH L LKV P+MLLRN+D GLCNGTRL + +L + + A VITG
Sbjct: 872 NSIKLAGLPNHSLRLKVSAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDIIG 931
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
V I ++L P+D F L A
Sbjct: 932 HIVLIPTVNLTPTDTKLPFKMRRRQFPLSVA 962
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 101 bits (251), Expect = 2e-20
Identities = 60/151 (39%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF R IL P + V IN YML + + E YLS++S S + + T FL
Sbjct: 1200 PKFFQRRAILAPKNEDVNTINQYMLEHLDSEERIYLSADSIDPS-DSDSLKNPVITPDFL 1258
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ K GM +H L LKV P+MLLRN+D GLCNGTRL + +L + A VITG
Sbjct: 1259 NSIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCSHIVEAKVITGDRIG 1318
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
V+I ++++ PSD F L A
Sbjct: 1319 QIVYIPLINITPSDTKLPFKMRRRQFPLSVA 1349
>gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Arabidopsis
thaliana]
Length = 729
Score = 100 bits (249), Expect = 4e-20
Identities = 59/151 (39%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF R IL P + V IN Y+L + A E YLS++S + + + T FL
Sbjct: 509 PKFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADS-IDPTDSDSLNNPVITPDFL 567
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ K G+ NH L LKV P+MLLRN+D GLCNGTRL + +L + + A VITG
Sbjct: 568 NSIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDRIG 627
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
+ V I ++L P+D F L A
Sbjct: 628 NIVLIPTVNLTPTDTKLPFKMRRRQFPLSVA 658
>ref|NP_174828.1| AT hook motif-containing protein-related [Arabidopsis thaliana]
gi|25511694|pir||D86481 189.6K hypothetical protein
F10O5.11 - Arabidopsis thaliana
gi|12322087|gb|AAG51081.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1678
Score = 100 bits (249), Expect = 4e-20
Identities = 59/151 (39%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF R IL P + V IN Y+L + A E YLS++S + + + T FL
Sbjct: 1458 PKFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADS-IDPTDSDSLNNPVITPDFL 1516
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ K G+ NH L LKV P+MLLRN+D GLCNGTRL + +L + + A VITG
Sbjct: 1517 NSIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDRIG 1576
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
+ V I ++L P+D F L A
Sbjct: 1577 NIVLIPTVNLTPTDTKLPFKMRRRQFPLSVA 1607
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 99.8 bits (247), Expect = 6e-20
Identities = 60/151 (39%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF R IL PT + V IN +M+ M+ E YLSS+S + + S + ++ FL
Sbjct: 801 PKFFQGRAILCPTNEDVNSINEHMMSMLDGEERIYLSSDS-IDPADTSSANNDAYSADFL 859
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ + G+ NH L LKV P+MLLRN+D GLCNGTRL V ++ + I A ITG
Sbjct: 860 NSVRVSGLPNHCLRLKVGCPVMLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVG 919
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
V I M + PSD F L A
Sbjct: 920 KIVLIPRMLITPSDTRLPFKMRRRQFPLSVA 950
>gb|AAC28215.1| contains similarity to helicases [Arabidopsis thaliana]
gi|7487403|pir||T01873 hypothetical protein T24M8.10 -
Arabidopsis thaliana
Length = 258
Score = 97.8 bits (242), Expect = 2e-19
Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 2 QFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FLN 61
+F +R IL+PT + V IN +L + E +YLS +S S SE FT FLN
Sbjct: 61 KFIQERAILSPTNEDVNTINQRLLEKLPGEEIQYLSIDSIDLSDTTSEY-NPVFTPDFLN 119
Query: 62 NTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAND 121
+ K G+ NH L L + PIMLLRN+D GLCNGTRL ++++ + A +ITG D
Sbjct: 120 SIKISGLPNHCLRLNIGAPIMLLRNLDPKGGLCNGTRLQMIQMTPPILQAVIITGGRIGD 179
Query: 122 KVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
KV IS + + PSD N F + A
Sbjct: 180 KVLISKILITPSDTKLPFNMRRKQFPIVVA 209
>ref|NP_680578.1| hypothetical protein [Arabidopsis thaliana]
Length = 251
Score = 97.8 bits (242), Expect = 2e-19
Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 2 QFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FLN 61
+F +R IL+PT + V IN +L + E +YLS +S S SE FT FLN
Sbjct: 54 KFIQERAILSPTNEDVNTINQRLLEKLPGEEIQYLSIDSIDLSDTTSEY-NPVFTPDFLN 112
Query: 62 NTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAND 121
+ K G+ NH L L + PIMLLRN+D GLCNGTRL ++++ + A +ITG D
Sbjct: 113 SIKISGLPNHCLRLNIGAPIMLLRNLDPKGGLCNGTRLQMIQMTPPILQAVIITGGRIGD 172
Query: 122 KVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
KV IS + + PSD N F + A
Sbjct: 173 KVLISKILITPSDTKLPFNMRRKQFPIVVA 202
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 97.8 bits (242), Expect = 2e-19
Identities = 59/151 (39%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF R IL P V IN ML + YLS++S + + + + T FL
Sbjct: 878 PKFFQQRAILCPRNTDVNTINDIMLDKLNGELVTYLSADS-IDPQDAASLNNPVLTPDFL 936
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ K G+ NH L LK+ P+MLLRNID GLCNGTRL V ++G + A VITG
Sbjct: 937 NSIKLSGLPNHNLTLKIGTPVMLLRNIDPKGGLCNGTRLQVTQMGNHILEARVITGDRVG 996
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
DKV I + PSD F + A
Sbjct: 997 DKVIIIKSQISPSDTKLPFRMRRRQFPIAVA 1027
>gb|AAD20107.1| putative helicase [Arabidopsis thaliana] gi|25353665|pir||H84515
probable helicase [imported] - Arabidopsis thaliana
Length = 1230
Score = 97.4 bits (241), Expect = 3e-19
Identities = 60/151 (39%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P+FF + IL PT V IN +ML + E Y SSNS S ++ +T FL
Sbjct: 1053 PKFFQHKAILCPTNDDVNSINDHMLSKLTGEERIYRSSNSIDPSDTRADK-NPIYTPDFL 1111
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N K G++NH L LKV P+MLLRN GL NGTRL +V LG++ + ++TGT
Sbjct: 1112 NKIKISGLANHLLRLKVGCPVMLLRNFYPHGGLMNGTRLQIVRLGDKLVQGRILTGTRVG 1171
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQYA 151
V I M L PSD + F L A
Sbjct: 1172 KLVIIPRMSLTPSDRRLPFKMKRRHFPLSVA 1202
>ref|NP_912739.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1278
Score = 95.9 bits (237), Expect = 9e-19
Identities = 51/149 (34%), Positives = 80/149 (53%)
Query: 1 PQFFHDRVILTPTLKAVEMINTYMLGMIAAPEHEYLSSNSALRSYEHSEI*GEWFTT*FL 60
P + I+ P V+ IN M+ M+ EYLS ++ +S EH + T FL
Sbjct: 1023 PSYLASCAIVCPNNSTVDDINDRMVDMVPGEVKEYLSCDTISKSSEHIPDFDLLYPTEFL 1082
Query: 61 NNTKS*GMSNHKLLLKVDIPIMLLRNIDQAAGLCNGTRLIVVELGERYIGATVITGTNAN 120
N+ + HKL LK + +MLLRN++Q+ GLCNGTRL+ + LG+R + ++TGTN
Sbjct: 1083 NSISANNFPAHKLALKKGVTVMLLRNLNQSMGLCNGTRLLALSLGQRLLECQILTGTNIG 1142
Query: 121 DKVHISIMDLVPSDPNFQLNSEEDSFQLQ 149
D+V I + L + P + + F ++
Sbjct: 1143 DRVFIPRIALTTTSPKWPFTLQRRQFPVR 1171
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.341 0.150 0.478
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 365,111,507
Number of Sequences: 2540612
Number of extensions: 13528912
Number of successful extensions: 34887
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 34707
Number of HSP's gapped (non-prelim): 123
length of query: 242
length of database: 863,360,394
effective HSP length: 124
effective length of query: 118
effective length of database: 548,324,506
effective search space: 64702291708
effective search space used: 64702291708
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0197.8