BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0197.6
(158 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB36543.1| DnaJ-like protein [Phaseolus vulgaris] gi|7488763... 179 2e-44
emb|CAB81513.1| DnaJ-like protein [Arabidopsis thaliana] gi|3036... 134 1e-30
gb|AAM64303.1| putative DnaJ protein [Arabidopsis thaliana] gi|2... 134 1e-30
emb|CAC03599.1| J11 protein [Arabidopsis thaliana] 133 2e-30
ref|XP_483660.1| dnaJ protein homolog-like [Oryza sativa (japoni... 96 2e-19
gb|AAP88343.1| At3g13310 [Arabidopsis thaliana] gi|21592683|gb|A... 84 9e-16
ref|NP_908331.1| putative DnaJ-like protein [Oryza sativa (japon... 77 2e-13
gb|AAF24498.1| DnaJ-like protein [Arabidopsis thaliana] 75 4e-13
emb|CAB78425.1| DnaJ-like protein [Arabidopsis thaliana] gi|4455... 74 1e-12
ref|NP_849376.1| DNAJ heat shock N-terminal domain-containing pr... 73 3e-12
sp|O34136|DNAJ_DEIPR Chaperone protein dnaJ gi|2351851|gb|AAB968... 68 7e-11
ref|XP_468279.1| putative heat shock protein dnaJ [Oryza sativa ... 67 1e-10
gb|AAS54573.1| AGR084Cp [Ashbya gossypii ATCC 10895] gi|45201179... 67 1e-10
ref|NP_815032.1| dnaJ protein [Enterococcus faecalis V583] gi|29... 67 2e-10
ref|ZP_00370265.1| co-chaperone-curved DNA binding protein A (Cb... 67 2e-10
ref|YP_182107.1| co-chaperone protein DnaJ [Dehalococcoides ethe... 67 2e-10
ref|ZP_00359132.1| COG0484: DnaJ-class molecular chaperone with ... 67 2e-10
gb|EAL93616.1| DnaJ domain protein [Aspergillus fumigatus Af293] 66 3e-10
ref|XP_602877.1| PREDICTED: similar to DnaJ homolog subfamily A ... 66 3e-10
gb|AAU06581.1| chloroplast DnaJ-like protein 2 [Chlamydomonas re... 66 3e-10
>gb|AAB36543.1| DnaJ-like protein [Phaseolus vulgaris] gi|7488763|pir||T11855 DnaJ
protein homolog - kidney bean (fragment)
Length = 161
Score = 179 bits (455), Expect = 2e-44
Identities = 97/156 (62%), Positives = 112/156 (71%), Gaps = 8/156 (5%)
Query: 9 ATTFSGQIATSPTGHVRSRPVLAFATATEADYRPTPSLHLSTHG------DSGMASCSSS 62
A FSG++ SP VRSRP++AFATAT S + S + S SS
Sbjct: 8 AVNFSGKVLASPPCRVRSRPIVAFATATATATATATSTEEARSSWTEKPRPSYLNSSCSS 67
Query: 63 LYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDPEKR 122
LY+ILGI A AS QEIKAAYRRLARV HP+VAA+DRK+SSADEFMKIHAAYSTLSDP+KR
Sbjct: 68 LYDILGIPAGASSQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKR 127
Query: 123 ASYDRSMNRRRRPLTAAVTSRFSGYKGRNWETDQCW 158
A+YDRS+ RR+RPL+ A FSGY RNWETDQCW
Sbjct: 128 ANYDRSLFRRQRPLSTAAV--FSGYTRRNWETDQCW 161
>emb|CAB81513.1| DnaJ-like protein [Arabidopsis thaliana] gi|3036808|emb|CAA18498.1|
DnaJ-like protein [Arabidopsis thaliana]
gi|15233446|ref|NP_195328.1| DNAJ heat shock N-terminal
domain-containing protein (J11) [Arabidopsis thaliana]
gi|66774118|sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ
11, chloroplast precursor (AtJ11) (AtDjC11)
Length = 161
Score = 134 bits (336), Expect = 1e-30
Identities = 73/140 (52%), Positives = 89/140 (63%), Gaps = 5/140 (3%)
Query: 20 PTGHVRSRPVLAFATATEADYRPTPSLHLSTHGDSGMASCSSSLYEILGIAAAASDQEIK 79
P+ R P L A+ + +P LH + + +SLY++L + A+ Q+IK
Sbjct: 26 PSRTARISPPLVSASCSYTYTEDSPRLHQIPRR---LTTVPASLYDVLEVPLGATSQDIK 82
Query: 80 AAYRRLARVRHPNVAAVDR-KDSSADEFMKIHAAYSTLSDPEKRASYDRSMNRRRRPLTA 138
+AYRRLAR+ HP+VA DR SSADEFMKIHAAY TLSDPEKR+ YDR M RR RPLT
Sbjct: 83 SAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDPEKRSVYDRRMLRRSRPLTV 142
Query: 139 AVTSRFSGYKGRNWETDQCW 158
TS Y GRNWETDQCW
Sbjct: 143 G-TSGLGSYVGRNWETDQCW 161
>gb|AAM64303.1| putative DnaJ protein [Arabidopsis thaliana]
gi|20147115|gb|AAM10274.1| At2g17880/At2g17880
[Arabidopsis thaliana] gi|2708746|gb|AAD03570.1|
putative DnaJ protein [Arabidopsis thaliana]
gi|14190375|gb|AAK55668.1| At2g17880 [Arabidopsis
thaliana] gi|7486985|pir||T00836 probable dnaJ protein
At2g17880 [imported] - Arabidopsis thaliana
gi|15227919|ref|NP_179378.1| DNAJ heat shock protein,
putative [Arabidopsis thaliana]
Length = 160
Score = 134 bits (336), Expect = 1e-30
Identities = 80/158 (50%), Positives = 98/158 (61%), Gaps = 12/158 (7%)
Query: 2 LSPSFTTATTFSGQIATSPTGHV-RSRPVLAFATATEADYRPTPSLHLSTHGDSGMASCS 60
LS S +++ +FS +TSP + R P L+ TA+ P L S +
Sbjct: 14 LSSSSSSSPSFS---STSPPSRISRISPSLSTTTASYTCAEDLPRLRQIPQ----RFSAT 66
Query: 61 SSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDPE 120
+SLYEIL I ++ QEIK+AYRRLAR+ HP+VA R +SSAD+FMKIHAAY TLSDPE
Sbjct: 67 ASLYEILEIPVGSTSQEIKSAYRRLARICHPDVARNSRDNSSADDFMKIHAAYCTLSDPE 126
Query: 121 KRASYDRSMNRRRRPLTAAVTSRFSGYKGRNWETDQCW 158
KRA YDR R RPLTA + Y GRNWETDQCW
Sbjct: 127 KRAVYDRRTLLRSRPLTAG----YGSYGGRNWETDQCW 160
>emb|CAC03599.1| J11 protein [Arabidopsis thaliana]
Length = 161
Score = 133 bits (334), Expect = 2e-30
Identities = 73/140 (52%), Positives = 89/140 (63%), Gaps = 5/140 (3%)
Query: 20 PTGHVRSRPVLAFATATEADYRPTPSLHLSTHGDSGMASCSSSLYEILGIAAAASDQEIK 79
P+ R P L A+ + +P LH + + +SLY++L + A+ Q+IK
Sbjct: 26 PSRTARISPPLVSASCSYTYTEDSPRLHQIPRR---LTTVPASLYDVLEVPLGATSQDIK 82
Query: 80 AAYRRLARVRHPNVAAVDR-KDSSADEFMKIHAAYSTLSDPEKRASYDRSMNRRRRPLTA 138
+AYRRLAR+ HP+VA DR SSADEFMKIHAAY TLSDPEKR+ YDR M RR RPLT
Sbjct: 83 SAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDPEKRSVYDRRMLRRSRPLTV 142
Query: 139 AVTSRFSGYKGRNWETDQCW 158
TS Y GRNWETDQCW
Sbjct: 143 G-TSGLGRYVGRNWETDQCW 161
>ref|XP_483660.1| dnaJ protein homolog-like [Oryza sativa (japonica cultivar-group)]
gi|42408733|dbj|BAD09951.1| dnaJ protein homolog-like
[Oryza sativa (japonica cultivar-group)]
gi|42407552|dbj|BAD10757.1| dnaJ protein homolog-like
[Oryza sativa (japonica cultivar-group)]
Length = 146
Score = 96.3 bits (238), Expect = 2e-19
Identities = 53/109 (48%), Positives = 70/109 (63%), Gaps = 14/109 (12%)
Query: 60 SSSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDP 119
+ +LY++LG+ A A+ +EIKAAYRRLAR RHP+VAA + AD+F+++H AY+TLSDP
Sbjct: 42 AGTLYDVLGLRAGATVREIKAAYRRLARERHPDVAA----SAGADDFVRLHDAYATLSDP 97
Query: 120 EKRASYDR------SMNRRRRPLTAAVTSRFSGYKG----RNWETDQCW 158
+ RA YDR SM R T A + + G R WETDQCW
Sbjct: 98 DSRARYDRDVVAVASMARGAHHRTMAAPAAAPRWYGRRPRRTWETDQCW 146
>gb|AAP88343.1| At3g13310 [Arabidopsis thaliana] gi|21592683|gb|AAM64632.1| DnaJ
protein, putative [Arabidopsis thaliana]
gi|9294537|dbj|BAB02800.1| DnaJ-like protein
[Arabidopsis thaliana] gi|15231204|ref|NP_187939.1| DNAJ
heat shock N-terminal domain-containing protein
[Arabidopsis thaliana]
Length = 157
Score = 84.3 bits (207), Expect = 9e-16
Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Query: 61 SSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDPE 120
SSLYE+L + AS EIK AYR LA+V HP+ + D +D FM+IH AY+TL+DP
Sbjct: 63 SSLYELLKVNETASLTEIKTAYRSLAKVYHPDASESDGRD-----FMEIHKAYATLADPT 117
Query: 121 KRASYDRSMNRRRRPLTAAVTSRFSGYKG--RNWETDQCW 158
RA YD ++ RR + A R R WETDQCW
Sbjct: 118 TRAIYDSTLRVPRRRVHAGAMGRSGRVYATTRRWETDQCW 157
>ref|NP_908331.1| putative DnaJ-like protein [Oryza sativa (japonica cultivar-group)]
gi|15408854|dbj|BAB64243.1| putative DnaJ-like protein
[Oryza sativa (japonica cultivar-group)]
gi|20804435|dbj|BAB92132.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|15128446|dbj|BAB62630.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 190
Score = 77.0 bits (188), Expect = 2e-13
Identities = 47/147 (31%), Positives = 75/147 (50%), Gaps = 4/147 (2%)
Query: 16 IATSPTGHVRSRPVLAFATATEADYRPTPSLHLST--HGDSGMASCSS--SLYEILGIAA 71
+A SPT + P A P P L + D G + +LY++LGI++
Sbjct: 4 LAASPTSAAAAAPASARVAFLRPGRVPRPPLQTARGLRPDLGTLRTAEQPTLYDLLGISS 63
Query: 72 AASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDPEKRASYDRSMNR 131
+ E++AAYRR+AR HP+V+ D + F+++ AY TLSDP +RA+YDR++ R
Sbjct: 64 EGTLDEVRAAYRRMARKYHPDVSPPDAAAENTRRFIEVQEAYETLSDPSRRATYDRALAR 123
Query: 132 RRRPLTAAVTSRFSGYKGRNWETDQCW 158
L + + R + Y ++ E W
Sbjct: 124 GVCRLAFSSSRRVAPYYYQDQEDKSGW 150
>gb|AAF24498.1| DnaJ-like protein [Arabidopsis thaliana]
Length = 197
Score = 75.5 bits (184), Expect = 4e-13
Identities = 42/114 (36%), Positives = 61/114 (52%), Gaps = 10/114 (8%)
Query: 50 THGDSGMASCSSSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKI 109
TH D S S Y++LG+ + + EIK AY++LAR HP+V+ DR + D F+++
Sbjct: 54 THDDPVKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRV 113
Query: 110 HAAYSTLSDPEKRASYDRSMN---------RRRRPLTAAVTSRFSGYKGRNWET 154
AY TLSDP +R YDR ++ RRR V S +K + W+T
Sbjct: 114 QEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRRNRYDQEVVEEKSEWKAK-WQT 166
>emb|CAB78425.1| DnaJ-like protein [Arabidopsis thaliana] gi|4455312|emb|CAB36847.1|
DnaJ-like protein [Arabidopsis thaliana]
gi|21280963|gb|AAM44977.1| putative DnaJ protein
[Arabidopsis thaliana] gi|13877947|gb|AAK44051.1|
putative DnaJ protein [Arabidopsis thaliana]
gi|66774120|sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ
20, chloroplast precursor (AtJ20) (AtDjC20)
gi|15236355|ref|NP_193119.1| DNAJ heat shock N-terminal
domain-containing protein (J20) [Arabidopsis thaliana]
Length = 197
Score = 73.9 bits (180), Expect = 1e-12
Identities = 41/114 (35%), Positives = 61/114 (52%), Gaps = 10/114 (8%)
Query: 50 THGDSGMASCSSSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKI 109
TH D S S Y++LG+ + + EIK AY++LAR HP+V+ DR + D F+++
Sbjct: 54 THDDPVKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRV 113
Query: 110 HAAYSTLSDPEKRASYDRSMN---------RRRRPLTAAVTSRFSGYKGRNWET 154
AY TLSDP +R YDR ++ RR+ V S +K + W+T
Sbjct: 114 QEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSEWKAK-WQT 166
>ref|NP_849376.1| DNAJ heat shock N-terminal domain-containing protein (J20)
[Arabidopsis thaliana]
Length = 155
Score = 72.8 bits (177), Expect = 3e-12
Identities = 34/81 (41%), Positives = 50/81 (60%)
Query: 50 THGDSGMASCSSSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKI 109
TH D S S Y++LG+ + + EIK AY++LAR HP+V+ DR + D F+++
Sbjct: 54 THDDPVKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRV 113
Query: 110 HAAYSTLSDPEKRASYDRSMN 130
AY TLSDP +R YDR ++
Sbjct: 114 QEAYETLSDPRRRVLYDRDLS 134
>sp|O34136|DNAJ_DEIPR Chaperone protein dnaJ gi|2351851|gb|AAB96892.1| 40 kDa heat shock
chaperone protein [Deinococcus proteolyticus]
Length = 307
Score = 68.2 bits (165), Expect = 7e-11
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 64 YEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDPEKRA 123
YE+LG++ +ASD +IK+AYR+LA+ HP+ A D +S+A++F +I AY+ LSDP+KR
Sbjct: 7 YEVLGVSRSASDSDIKSAYRKLAKQYHPDKNAGD--ESAAEKFKEIGEAYAVLSDPQKRQ 64
Query: 124 SYDR 127
+YD+
Sbjct: 65 AYDQ 68
>ref|XP_468279.1| putative heat shock protein dnaJ [Oryza sativa (japonica
cultivar-group)] gi|47497379|dbj|BAD19417.1| putative
heat shock protein dnaJ [Oryza sativa (japonica
cultivar-group)]
Length = 487
Score = 67.4 bits (163), Expect = 1e-10
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 3 SPSFTTATTFSGQIATSPTGHVR---SRPVLAFATATEADY-RPTPSLHLSTHGDSGMAS 58
+PS + ++ S A SP G V +R L A A RP P G +
Sbjct: 11 APSNPSPSSRSAAAAFSPRGGVHFAAARSGLPLACAAPRHRGRPPPRRR---RGGCLVVW 67
Query: 59 CSSSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSD 118
S+ Y LG+ +AS+++IKAAYR+LAR HP+ V+++ + D+F +I AAY LSD
Sbjct: 68 ASADYYATLGVPRSASNKDIKAAYRKLARQYHPD---VNKEPGATDKFKEISAAYEVLSD 124
Query: 119 PEKRASYDR 127
+KRA YD+
Sbjct: 125 EKKRALYDQ 133
>gb|AAS54573.1| AGR084Cp [Ashbya gossypii ATCC 10895] gi|45201179|ref|NP_986749.1|
AGR084Cp [Eremothecium gossypii]
Length = 427
Score = 67.4 bits (163), Expect = 1e-10
Identities = 33/66 (50%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 63 LYEILGIAAAASDQEIKAAYRRLARVRHPN-VAAVDRKDSSADEFMKIHAAYSTLSDPEK 121
LYE+LGIA++AS+QE+K AYR+LA HP+ ++ +++S +F +I AAY+ LSD +K
Sbjct: 5 LYEVLGIASSASEQEVKRAYRQLALRYHPDKISDESEREASEAKFKEISAAYAVLSDEQK 64
Query: 122 RASYDR 127
RA YD+
Sbjct: 65 RAEYDQ 70
>ref|NP_815032.1| dnaJ protein [Enterococcus faecalis V583]
gi|29343340|gb|AAO81102.1| dnaJ protein [Enterococcus
faecalis V583] gi|62900007|sp|Q835R5|DNAJ_ENTFA
Chaperone protein dnaJ
Length = 389
Score = 67.0 bits (162), Expect = 2e-10
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 64 YEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADE-FMKIHAAYSTLSDPEKR 122
YE+LG+A ASD EIK AYR+L++ HP++ K++ A+E F ++ AY LSDP+K+
Sbjct: 8 YEVLGLAKGASDDEIKKAYRKLSKKYHPDI----NKEADAEEKFKEVSEAYEVLSDPQKK 63
Query: 123 ASYDRSMNRRRRPLTAAVTSRFSGYKG 149
A+YD+ + P F G+ G
Sbjct: 64 AAYDQYGHAGTDPNYGGGAGGFGGFGG 90
>ref|ZP_00370265.1| co-chaperone-curved DNA binding protein A (CbpA) [Campylobacter
upsaliensis RM3195] gi|57017006|gb|EAL53788.1|
co-chaperone-curved DNA binding protein A (CbpA)
[Campylobacter upsaliensis RM3195]
Length = 293
Score = 67.0 bits (162), Expect = 2e-10
Identities = 33/67 (49%), Positives = 49/67 (72%), Gaps = 3/67 (4%)
Query: 61 SSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDPE 120
+SLYE LG++ AS+ EIK AYRRLAR HP+ ++++ + ++F +I+AAY LSD +
Sbjct: 2 NSLYETLGVSKNASNDEIKKAYRRLARQYHPD---INKEKGAEEKFKEINAAYEILSDEK 58
Query: 121 KRASYDR 127
KRA YD+
Sbjct: 59 KRAQYDK 65
>ref|YP_182107.1| co-chaperone protein DnaJ [Dehalococcoides ethenogenes 195]
gi|57224295|gb|AAW39352.1| co-chaperone protein DnaJ
[Dehalococcoides ethenogenes 195]
Length = 356
Score = 66.6 bits (161), Expect = 2e-10
Identities = 31/64 (48%), Positives = 48/64 (74%), Gaps = 3/64 (4%)
Query: 64 YEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDPEKRA 123
YE+LGI +ASD++IK A+R++A HP+ + +D +A++F +I+ AY LS+PEKRA
Sbjct: 8 YEVLGIERSASDEDIKKAFRKMAMKHHPDR---NHEDGAAEKFKEINEAYEVLSNPEKRA 64
Query: 124 SYDR 127
+YDR
Sbjct: 65 AYDR 68
>ref|ZP_00359132.1| COG0484: DnaJ-class molecular chaperone with C-terminal Zn finger
domain [Chloroflexus aurantiacus]
Length = 289
Score = 66.6 bits (161), Expect = 2e-10
Identities = 36/71 (50%), Positives = 47/71 (65%), Gaps = 2/71 (2%)
Query: 64 YEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDPEKRA 123
Y++LG++ ASD+EIK AYRRLAR HP+V D K + F +I+ AY LSD E+RA
Sbjct: 5 YQVLGVSRTASDEEIKQAYRRLARKYHPDVNPGDPKAEA--RFKEINEAYQVLSDKEQRA 62
Query: 124 SYDRSMNRRRR 134
YDR + RR
Sbjct: 63 KYDRFGSDFRR 73
>gb|EAL93616.1| DnaJ domain protein [Aspergillus fumigatus Af293]
Length = 323
Score = 65.9 bits (159), Expect = 3e-10
Identities = 30/69 (43%), Positives = 47/69 (67%)
Query: 60 SSSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLSDP 119
++ LYE+LG+ A+ EIK+AYR+LA HP+ A D+KD + +F +I AY+ LSD
Sbjct: 32 ATDLYEVLGVKEDATQDEIKSAYRKLALKHHPDKAPADQKDQAHSKFQQIAFAYAILSDE 91
Query: 120 EKRASYDRS 128
++R +DR+
Sbjct: 92 KRRRRFDRT 100
>ref|XP_602877.1| PREDICTED: similar to DnaJ homolog subfamily A member 2 (RDJ2),
partial [Bos taurus]
Length = 110
Score = 65.9 bits (159), Expect = 3e-10
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 42 PTPSLHLSTHGDSGMASCSSS-LYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKD 100
P+P LS + MA+ + + LY+ LG+ AS+ E+K AYR+LA+ HP D+
Sbjct: 21 PSPPSFLSAARPAAMANVADTKLYDHLGVPPGASENELKKAYRKLAKEYHP-----DKNP 75
Query: 101 SSADEFMKIHAAYSTLSDPEKRASYDR 127
++ D+F +I AY LS+PEKR YDR
Sbjct: 76 NAGDKFKEISFAYEVLSNPEKRELYDR 102
>gb|AAU06581.1| chloroplast DnaJ-like protein 2 [Chlamydomonas reinhardtii]
Length = 374
Score = 65.9 bits (159), Expect = 3e-10
Identities = 30/72 (41%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 58 SCSSSLYEILGIAAAASDQEIKAAYRRLARVRHPNVAAVDRKDSSADEFMKIHAAYSTLS 117
+ + + Y+ILG++A+A+D++IK+AYR+LA HP+ V++ + FM++ AY TLS
Sbjct: 68 AAAKNFYDILGVSASATDRDIKSAYRKLAMKLHPD---VNKAPDAQKRFMEVKVAYETLS 124
Query: 118 DPEKRASYDRSM 129
D ++RA YDR +
Sbjct: 125 DAKQRAEYDRRL 136
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.125 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 255,373,101
Number of Sequences: 2540612
Number of extensions: 9330482
Number of successful extensions: 30242
Number of sequences better than 10.0: 2416
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 654
Number of HSP's that attempted gapping in prelim test: 26572
Number of HSP's gapped (non-prelim): 2447
length of query: 158
length of database: 863,360,394
effective HSP length: 117
effective length of query: 41
effective length of database: 566,108,790
effective search space: 23210460390
effective search space used: 23210460390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0197.6