BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0195a.7
(69 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAF02296.1| Rho GDP dissociation inhibitor 2 [Medicago trunc... 127 6e-29
gb|AAF21198.1| putative RHO GDP-dissociation inhibitor 1 [Arabid... 114 9e-25
gb|AAQ72349.1| Rho GDP dissociation inhibitor 2 [Oryza sativa (j... 111 4e-24
dbj|BAD61596.1| putative Rho GDP dissociation inhibitor 2 [Oryza... 111 4e-24
gb|AAP41841.1| Rac GDP-dissociation inhibitor 1 [Oryza sativa (j... 110 1e-23
gb|AAF70843.1| F24O1.20 [Arabidopsis thaliana] gi|5454188|gb|AAD... 109 2e-23
ref|NP_176435.1| Rho GDP-dissociation inhibitor family protein [... 109 2e-23
ref|NP_172671.1| Rho GDP-dissociation inhibitor family protein [... 100 1e-20
ref|NP_914805.1| putative Rho GDP-dissociation inhibitor [Oryza ... 97 8e-20
emb|CAB77025.1| putative Rho GDP dissociation inhibitor [Nicotia... 82 3e-15
emb|CAF02295.1| Rho GDP dissociation inhibitor 1 [Medicago trunc... 78 7e-14
dbj|BAD61597.1| putative Rho GDP dissociation inhibitor 2 [Oryza... 70 1e-11
gb|EAA56038.1| hypothetical protein MG01689.4 [Magnaporthe grise... 69 3e-11
gb|EAA75518.1| hypothetical protein FG05282.1 [Gibberella zeae P... 68 7e-11
gb|AAK07841.1| putative rho GDP dissociation inhibitor G6G8.3 [N... 68 7e-11
ref|XP_326416.1| hypothetical protein ( (AF309689) putative rho ... 68 7e-11
gb|AAF49090.1| CG7823-PA [Drosophila melanogaster] gi|21356837|r... 67 1e-10
gb|EAK86096.1| hypothetical protein UM05693.1 [Ustilago maydis 5... 66 3e-10
gb|EAL91473.1| rho-gdp dissociation inhibitor [Aspergillus fumig... 65 4e-10
gb|EAA66036.1| hypothetical protein AN0163.2 [Aspergillus nidula... 64 1e-09
>emb|CAF02296.1| Rho GDP dissociation inhibitor 2 [Medicago truncatula]
Length = 233
Score = 127 bits (320), Expect = 6e-29
Identities = 58/66 (87%), Positives = 63/66 (94%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
+ VDSSKEMIGTFSPQT+ YTHEMP+ETTPSG+FAR AYSARSKFVDDDNKCYLEI+YTF
Sbjct: 167 IKVDSSKEMIGTFSPQTETYTHEMPEETTPSGMFARGAYSARSKFVDDDNKCYLEINYTF 226
Query: 64 DIRKDW 69
DIRKDW
Sbjct: 227 DIRKDW 232
>gb|AAF21198.1| putative RHO GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
gi|21553639|gb|AAM62732.1| putative RHO GDP-dissociation
inhibitor 1 [Arabidopsis thaliana]
gi|26451537|dbj|BAC42866.1| putative RHO
GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
gi|28973347|gb|AAO63998.1| putative RHO GDP-dissociation
inhibitor 1 [Arabidopsis thaliana]
gi|15866274|gb|AAL10299.1| Rho GDP-dissociation
inhibitor 1 [Arabidopsis thaliana]
gi|15231890|ref|NP_187445.1| Rho GDP-dissociation
inhibitor family protein [Arabidopsis thaliana]
gi|21759146|sp|Q9SFC6|GDIR_ARATH Rho GDP-dissociation
inhibitor 1 (Rho GDI-1) (AtRhoGDI1)
Length = 240
Score = 114 bits (284), Expect = 9e-25
Identities = 49/66 (74%), Positives = 60/66 (90%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
V VD +KEM+GTFSPQ +PY H MP+ETTPSG+FAR +YSAR+KF+DDDNKCYLEI+Y+F
Sbjct: 172 VKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSF 231
Query: 64 DIRKDW 69
DIRK+W
Sbjct: 232 DIRKEW 237
>gb|AAQ72349.1| Rho GDP dissociation inhibitor 2 [Oryza sativa (japonica
cultivar-group)]
Length = 264
Score = 111 bits (278), Expect = 4e-24
Identities = 47/66 (71%), Positives = 59/66 (89%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
+ VD +KEM+GTFSPQ +PYT+ P+ETTPSG+FAR +YSA++KFVDDD KCYLEI+YTF
Sbjct: 195 IRVDKTKEMLGTFSPQLEPYTYVTPEETTPSGVFARGSYSAKTKFVDDDRKCYLEINYTF 254
Query: 64 DIRKDW 69
DIR+DW
Sbjct: 255 DIRRDW 260
>dbj|BAD61596.1| putative Rho GDP dissociation inhibitor 2 [Oryza sativa (japonica
cultivar-group)] gi|54290506|dbj|BAD61572.1| putative
Rho GDP dissociation inhibitor 2 [Oryza sativa (japonica
cultivar-group)]
Length = 270
Score = 111 bits (278), Expect = 4e-24
Identities = 47/66 (71%), Positives = 59/66 (89%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
+ VD +KEM+GTFSPQ +PYT+ P+ETTPSG+FAR +YSA++KFVDDD KCYLEI+YTF
Sbjct: 201 IRVDKTKEMLGTFSPQLEPYTYVTPEETTPSGVFARGSYSAKTKFVDDDRKCYLEINYTF 260
Query: 64 DIRKDW 69
DIR+DW
Sbjct: 261 DIRRDW 266
>gb|AAP41841.1| Rac GDP-dissociation inhibitor 1 [Oryza sativa (japonica
cultivar-group)] gi|50912179|ref|XP_467497.1| Rac
GDP-dissociation inhibitor 1 [Oryza sativa (japonica
cultivar-group)] gi|45735876|dbj|BAD12910.1| Rac
GDP-dissociation inhibitor 1 [Oryza sativa (japonica
cultivar-group)] gi|45735825|dbj|BAD12860.1| Rac
GDP-dissociation inhibitor 1 [Oryza sativa (japonica
cultivar-group)]
Length = 254
Score = 110 bits (274), Expect = 1e-23
Identities = 47/66 (71%), Positives = 59/66 (89%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
+ VDS KEM+GTFSPQ +PYT+ P+ETTPSG+FAR +YSAR+KF+DDD KCYLEI+YTF
Sbjct: 185 IKVDSHKEMLGTFSPQPEPYTYVTPEETTPSGMFARGSYSARTKFLDDDRKCYLEINYTF 244
Query: 64 DIRKDW 69
DIR++W
Sbjct: 245 DIRREW 250
>gb|AAF70843.1| F24O1.20 [Arabidopsis thaliana] gi|5454188|gb|AAD43603.1| T3P18.2
[Arabidopsis thaliana]
Length = 236
Score = 109 bits (273), Expect = 2e-23
Identities = 48/66 (72%), Positives = 57/66 (85%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
V VDS+K M+GTFSPQ + Y H MP+E TPSG+FAR +YSAR+KF+DDDNKCYLEI+YTF
Sbjct: 170 VKVDSTKAMLGTFSPQAESYQHVMPEEMTPSGMFARGSYSARTKFIDDDNKCYLEINYTF 229
Query: 64 DIRKDW 69
DIRK W
Sbjct: 230 DIRKSW 235
>ref|NP_176435.1| Rho GDP-dissociation inhibitor family protein [Arabidopsis
thaliana] gi|7488300|pir||T01457 rho protein
GDP-dissociation inhibitor homolog F24O1.19 -
Arabidopsis thaliana
Length = 223
Score = 109 bits (273), Expect = 2e-23
Identities = 48/66 (72%), Positives = 57/66 (85%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
V VDS+K M+GTFSPQ + Y H MP+E TPSG+FAR +YSAR+KF+DDDNKCYLEI+YTF
Sbjct: 157 VKVDSTKAMLGTFSPQAESYQHVMPEEMTPSGMFARGSYSARTKFIDDDNKCYLEINYTF 216
Query: 64 DIRKDW 69
DIRK W
Sbjct: 217 DIRKSW 222
>ref|NP_172671.1| Rho GDP-dissociation inhibitor family protein [Arabidopsis
thaliana] gi|3157927|gb|AAC17610.1| Contains similarity
to GDP-dissociation inhibitor gb|L07918 from Mus
musculus. [Arabidopsis thaliana] gi|25345328|pir||A86256
hypothetical protein [imported] - Arabidopsis thaliana
gi|24430116|gb|AAM97312.1| Rho GDP-dissociation
inhibitor 2b [Arabidopsis thaliana]
Length = 223
Score = 100 bits (249), Expect = 1e-20
Identities = 44/66 (66%), Positives = 54/66 (81%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
+ V S KEM+GTFSPQ +PYTH M +ET PSG+ R +YS +SKFVDDDN+CYLE +YTF
Sbjct: 157 IKVYSRKEMLGTFSPQAEPYTHVMFEETAPSGLLVRGSYSVKSKFVDDDNQCYLENNYTF 216
Query: 64 DIRKDW 69
DIRK+W
Sbjct: 217 DIRKNW 222
>ref|NP_914805.1| putative Rho GDP-dissociation inhibitor [Oryza sativa (japonica
cultivar-group)] gi|20161386|dbj|BAB90310.1| putative
Rac GDP-dissociation inhibitor 1 [Oryza sativa (japonica
cultivar-group)]
Length = 217
Score = 97.4 bits (241), Expect = 8e-20
Identities = 42/66 (63%), Positives = 55/66 (82%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
V V++ K M+GTFSPQ +PYT+E +ETTP+G+FAR +YSA+ KFVDDD KCYLE+ Y F
Sbjct: 148 VRVENQKVMLGTFSPQLEPYTYEGEEETTPAGMFARGSYSAKLKFVDDDGKCYLEMSYYF 207
Query: 64 DIRKDW 69
+IRK+W
Sbjct: 208 EIRKEW 213
>emb|CAB77025.1| putative Rho GDP dissociation inhibitor [Nicotiana tabacum]
Length = 226
Score = 82.4 bits (202), Expect = 3e-15
Identities = 35/62 (56%), Positives = 48/62 (76%)
Query: 6 VDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTFDI 65
VD SK M+GTF+PQ +PY H + +ETTPSG AR Y+A+ KFVDDD +C+L ++Y+F+I
Sbjct: 163 VDQSKGMLGTFAPQREPYIHMLEEETTPSGALARGTYTAKLKFVDDDKRCHLVLNYSFEI 222
Query: 66 RK 67
K
Sbjct: 223 SK 224
>emb|CAF02295.1| Rho GDP dissociation inhibitor 1 [Medicago truncatula]
Length = 219
Score = 77.8 bits (190), Expect = 7e-14
Identities = 32/62 (51%), Positives = 46/62 (73%)
Query: 6 VDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTFDI 65
VD SK M+GTF+PQ PY + + ++TTP+G AR YSA+ KF DDD +C++E+ Y F+I
Sbjct: 156 VDQSKGMLGTFAPQKGPYVYALKEDTTPAGALARGVYSAKLKFEDDDKRCHMELKYLFEI 215
Query: 66 RK 67
+K
Sbjct: 216 KK 217
>dbj|BAD61597.1| putative Rho GDP dissociation inhibitor 2 [Oryza sativa (japonica
cultivar-group)] gi|54290507|dbj|BAD61573.1| putative
Rho GDP dissociation inhibitor 2 [Oryza sativa (japonica
cultivar-group)]
Length = 254
Score = 70.5 bits (171), Expect = 1e-11
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYL 57
+ VD +KEM+GTFSPQ +PYT+ P+ETTPSG+FAR +YSA++K + D +L
Sbjct: 201 IRVDKTKEMLGTFSPQLEPYTYVTPEETTPSGVFARGSYSAKTKVMKSDTVIHL 254
>gb|EAA56038.1| hypothetical protein MG01689.4 [Magnaporthe grisea 70-15]
gi|39952093|ref|XP_363763.1| hypothetical protein
MG01689.4 [Magnaporthe grisea 70-15]
Length = 341
Score = 68.9 bits (167), Expect = 3e-11
Identities = 32/69 (46%), Positives = 45/69 (64%), Gaps = 3/69 (4%)
Query: 4 VTVDSSKEMIGTFSPQTDP---YTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEID 60
+ V EMIG+++P TD YT + +E P+G+ AR Y+A S FVDDD K +LE +
Sbjct: 273 IKVSKDSEMIGSYAPNTDKQPIYTKKFQEEEAPTGMLARGHYNAISSFVDDDKKKHLEFE 332
Query: 61 YTFDIRKDW 69
++FDI KDW
Sbjct: 333 WSFDIAKDW 341
>gb|EAA75518.1| hypothetical protein FG05282.1 [Gibberella zeae PH-1]
gi|46121809|ref|XP_385458.1| hypothetical protein
FG05282.1 [Gibberella zeae PH-1]
Length = 198
Score = 67.8 bits (164), Expect = 7e-11
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 4 VTVDSSKEMIGTFSPQTDP---YTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEID 60
+ V EMIG+++P TD Y + +E PSG+ AR Y+A S FVDDD K +LE +
Sbjct: 130 IRVSKDSEMIGSYAPSTDKQPTYIKKFQEEEAPSGMLARGHYNAISSFVDDDKKKHLEFE 189
Query: 61 YTFDIRKDW 69
++FDI KDW
Sbjct: 190 WSFDIAKDW 198
>gb|AAK07841.1| putative rho GDP dissociation inhibitor G6G8.3 [Neurospora crassa]
Length = 161
Score = 67.8 bits (164), Expect = 7e-11
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 9 SKEMIGTFSPQTDP---YTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTFDI 65
+ EMIG+++P TD YT +E P+G+ AR Y+A S+FVDDD K +LE +++FDI
Sbjct: 98 TSEMIGSYAPNTDKNPMYTKTFAEEEAPTGMLARGNYNAVSRFVDDDGKTHLEFEWSFDI 157
Query: 66 RKDW 69
KDW
Sbjct: 158 AKDW 161
>ref|XP_326416.1| hypothetical protein ( (AF309689) putative rho GDP dissociation
inhibitor G6G8.3 [Neurospora crassa] )
gi|28923869|gb|EAA33032.1| hypothetical protein (
(AF309689) putative rho GDP dissociation inhibitor
G6G8.3 [Neurospora crassa] )
Length = 148
Score = 67.8 bits (164), Expect = 7e-11
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 9 SKEMIGTFSPQTDP---YTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTFDI 65
+ EMIG+++P TD YT +E P+G+ AR Y+A S+FVDDD K +LE +++FDI
Sbjct: 85 TSEMIGSYAPNTDKNPMYTKTFAEEEAPTGMLARGNYNAVSRFVDDDGKTHLEFEWSFDI 144
Query: 66 RKDW 69
KDW
Sbjct: 145 AKDW 148
>gb|AAF49090.1| CG7823-PA [Drosophila melanogaster] gi|21356837|ref|NP_649162.1|
CG7823-PA [Drosophila melanogaster]
gi|16769100|gb|AAL28769.1| LD16419p [Drosophila
melanogaster]
Length = 201
Score = 67.0 bits (162), Expect = 1e-10
Identities = 30/66 (45%), Positives = 41/66 (61%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
V VD K M+G++ P+ + + P E PSG F+R YS S F DDD +LE D+TF
Sbjct: 135 VNVDKMKHMVGSYPPKKEIQFYLTPAEEAPSGTFSRGTYSVSSVFTDDDKHIHLEWDWTF 194
Query: 64 DIRKDW 69
+I+KDW
Sbjct: 195 EIKKDW 200
>gb|EAK86096.1| hypothetical protein UM05693.1 [Ustilago maydis 521]
gi|49079294|ref|XP_403308.1| hypothetical protein
UM05693.1 [Ustilago maydis 521]
Length = 202
Score = 65.9 bits (159), Expect = 3e-10
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 4 VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
+ VD +EMIG++ P+ +PY PSG+ AR YS RS+ VDDDN + + ++ F
Sbjct: 137 IKVDKMEEMIGSYGPRPEPYEKTFASSEAPSGMMARGNYSVRSRVVDDDNHVFADWEWAF 196
Query: 64 DIRKDW 69
I KDW
Sbjct: 197 KIAKDW 202
>gb|EAL91473.1| rho-gdp dissociation inhibitor [Aspergillus fumigatus Af293]
Length = 197
Score = 65.5 bits (158), Expect = 4e-10
Identities = 30/69 (43%), Positives = 45/69 (64%), Gaps = 3/69 (4%)
Query: 4 VTVDSSKEMIGTFSPQTDP---YTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEID 60
+ V +EM+G+++P T Y + E PSG+ AR Y+A SKFVDDDN+ +L+ +
Sbjct: 129 IRVSKDEEMLGSYAPSTTDKPIYEKKFNPEEAPSGMLARGHYNAISKFVDDDNQTHLQFE 188
Query: 61 YTFDIRKDW 69
++FDI KDW
Sbjct: 189 WSFDIAKDW 197
>gb|EAA66036.1| hypothetical protein AN0163.2 [Aspergillus nidulans FGSC A4]
gi|67515763|ref|XP_657767.1| hypothetical protein
AN0163_2 [Aspergillus nidulans FGSC A4]
gi|49084156|ref|XP_404300.1| hypothetical protein
AN0163.2 [Aspergillus nidulans FGSC A4]
Length = 197
Score = 63.9 bits (154), Expect = 1e-09
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 4 VTVDSSKEMIGTFSPQTDP---YTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEID 60
+ V +EM+G+++P T Y + +E PSG+ AR Y+A SKF+DDD+K +L
Sbjct: 129 IRVSKDQEMLGSYAPCTTGKPIYEKKFQEEEAPSGMMARGHYNAESKFIDDDDKVHLHFH 188
Query: 61 YTFDIRKDW 69
++FDI KDW
Sbjct: 189 WSFDIAKDW 197
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.135 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,977,476
Number of Sequences: 2540612
Number of extensions: 4425224
Number of successful extensions: 8736
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8628
Number of HSP's gapped (non-prelim): 99
length of query: 69
length of database: 863,360,394
effective HSP length: 45
effective length of query: 24
effective length of database: 749,032,854
effective search space: 17976788496
effective search space used: 17976788496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0195a.7