BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0190.5
(331 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00419182.1| Ketopantoate reductase ApbA/PanE [Azotobacter... 36 1.4
ref|XP_514315.1| PREDICTED: similar to Hypothetical protein 4832... 36 1.4
ref|XP_371354.1| PREDICTED: hypothetical protein FLJ10157 [Homo ... 36 1.4
dbj|BAC87614.1| unnamed protein product [Homo sapiens] 36 1.4
gb|AAH35896.1| FLJ10157 protein [Homo sapiens] 36 1.4
ref|XP_346356.2| PREDICTED: similar to RNA binding motif protein... 35 2.4
ref|NP_001006437.1| nuclear NF-kappaB activating protein [Gallus... 35 2.4
ref|NP_702156.1| transcription initiation TFIID-like, putative [... 35 3.1
ref|XP_325382.1| predicted protein [Neurospora crassa] gi|289219... 35 3.1
ref|XP_513272.1| PREDICTED: similar to SPOC domain containing 1 ... 35 4.0
emb|CAI16891.1| novel protein [Homo sapiens] gi|33988379|gb|AAH0... 34 5.3
emb|CAB54340.2| Hypothetical protein Y26D4A.2 [Caenorhabditis el... 34 5.3
ref|NP_493285.1| putative secreted or extracellular protein fami... 34 5.3
ref|YP_118643.1| cytochrome P450 monooxygenase [Nocardia farcini... 34 6.9
gb|AAV31206.1| hypothetical protein [Oryza sativa (japonica cult... 33 9.0
ref|NP_359779.1| hypothetical protein RC0142 [Rickettsia conorii... 33 9.0
gb|EAA25793.1| unknown [Rickettsia sibirica 246] gi|34580904|ref... 33 9.0
ref|YP_246105.1| TrbL/VirB6 plasmid Conjugative transfer protein... 33 9.0
ref|ZP_00349302.1| COG3704: Type IV secretory pathway, VirB6 com... 33 9.0
>ref|ZP_00419182.1| Ketopantoate reductase ApbA/PanE [Azotobacter vinelandii AvOP]
gi|67085075|gb|EAM04552.1| Ketopantoate reductase
ApbA/PanE [Azotobacter vinelandii AvOP]
Length = 359
Score = 36.2 bits (82), Expect = 1.4
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 4 QDLLVSCSSAHGLPCLPQQVVSEPMVGVAMVTAPCVESLP 43
QDLL C+ AH LP L + EPM+G V P V +P
Sbjct: 73 QDLLFLCAKAHDLPALLPTI--EPMLGAGTVVVPVVNGVP 110
>ref|XP_514315.1| PREDICTED: similar to Hypothetical protein 4832420M10 [Pan
troglodytes]
Length = 1408
Score = 36.2 bits (82), Expect = 1.4
Identities = 39/157 (24%), Positives = 63/157 (39%), Gaps = 35/157 (22%)
Query: 4 QDLLVSCSSAHGLPCLPQQVVSEPMVGVAMVTAPCVESLPSGFGLRCGVQDLLGVSPRPC 63
++ L SC G P + + P +G+A ++ PS RC V GV P P
Sbjct: 289 RESLNSCGFVEGKP----RPMGSPRLGIASLSKTSEYKPPSSPSQRCKVYTQKGVLPSPA 344
Query: 64 PMGP-RRDS--------------------PQQVVSERLVRGTEAGVPKVSIDDVVRWSVP 102
P+ P +DS QV+ + + G+E G P+ +DD + + P
Sbjct: 345 PLPPSSKDSSVASSESLLQPEVRTPPVGMSPQVLKKSMSAGSE-GFPETPVDDEQQAATP 403
Query: 103 ------FLTVERTAVQEHSPGNQDLEAEKLIFTRVRE 133
L+ VQ+ N + ++L+FT V E
Sbjct: 404 SESKKEILSTTMVTVQQPLELNGE---DELVFTLVEE 437
>ref|XP_371354.1| PREDICTED: hypothetical protein FLJ10157 [Homo sapiens]
Length = 1726
Score = 36.2 bits (82), Expect = 1.4
Identities = 39/157 (24%), Positives = 63/157 (39%), Gaps = 35/157 (22%)
Query: 4 QDLLVSCSSAHGLPCLPQQVVSEPMVGVAMVTAPCVESLPSGFGLRCGVQDLLGVSPRPC 63
++ L SC G P + + P +G+A ++ PS RC V GV P P
Sbjct: 665 RESLNSCGFVEGKP----RPMGSPRLGIASLSKTSEYKPPSSPSQRCKVYTQKGVLPSPA 720
Query: 64 PMGP-RRDS--------------------PQQVVSERLVRGTEAGVPKVSIDDVVRWSVP 102
P+ P +DS QV+ + + G+E G P+ +DD + + P
Sbjct: 721 PLPPSSKDSGVASRESLLQPEVRTPPVGMSPQVLKKSMSAGSE-GFPETPVDDEQQAATP 779
Query: 103 ------FLTVERTAVQEHSPGNQDLEAEKLIFTRVRE 133
L+ VQ+ N + ++L+FT V E
Sbjct: 780 SESKKEILSTTMVTVQQPLELNGE---DELVFTLVEE 813
>dbj|BAC87614.1| unnamed protein product [Homo sapiens]
Length = 686
Score = 36.2 bits (82), Expect = 1.4
Identities = 39/157 (24%), Positives = 63/157 (39%), Gaps = 35/157 (22%)
Query: 4 QDLLVSCSSAHGLPCLPQQVVSEPMVGVAMVTAPCVESLPSGFGLRCGVQDLLGVSPRPC 63
++ L SC G P + + P +G+A ++ PS RC V GV P P
Sbjct: 289 RESLNSCGFVEGKP----RPMGSPRLGIASLSKTSEYKPPSSPSQRCKVYTQKGVLPSPA 344
Query: 64 PMGP-RRDS--------------------PQQVVSERLVRGTEAGVPKVSIDDVVRWSVP 102
P+ P +DS QV+ + + G+E G P+ +DD + + P
Sbjct: 345 PLPPSSKDSGVASRESLLQPEVRTPPVGMSPQVLKKSMSAGSE-GFPETPVDDEQQAATP 403
Query: 103 ------FLTVERTAVQEHSPGNQDLEAEKLIFTRVRE 133
L+ VQ+ N + ++L+FT V E
Sbjct: 404 SESKKEILSTTMVTVQQPLELNGE---DELVFTLVEE 437
>gb|AAH35896.1| FLJ10157 protein [Homo sapiens]
Length = 820
Score = 36.2 bits (82), Expect = 1.4
Identities = 39/157 (24%), Positives = 63/157 (39%), Gaps = 35/157 (22%)
Query: 4 QDLLVSCSSAHGLPCLPQQVVSEPMVGVAMVTAPCVESLPSGFGLRCGVQDLLGVSPRPC 63
++ L SC G P + + P +G+A ++ PS RC V GV P P
Sbjct: 664 RESLNSCGFVEGKP----RPMGSPRLGIASLSKTSEYKPPSSPSQRCKVYTQKGVLPSPA 719
Query: 64 PMGP-RRDS--------------------PQQVVSERLVRGTEAGVPKVSIDDVVRWSVP 102
P+ P +DS QV+ + + G+E G P+ +DD + + P
Sbjct: 720 PLPPSSKDSGVASRESLLQPEVRTPPVGMSPQVLKKSMSAGSE-GFPETPVDDEQQAATP 778
Query: 103 ------FLTVERTAVQEHSPGNQDLEAEKLIFTRVRE 133
L+ VQ+ N + ++L+FT V E
Sbjct: 779 SESKKEILSTTMVTVQQPLELNGE---DELVFTLVEE 812
>ref|XP_346356.2| PREDICTED: similar to RNA binding motif protein, X-linked 2 [Rattus
norvegicus]
Length = 360
Score = 35.4 bits (80), Expect = 2.4
Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 40/198 (20%)
Query: 142 IDSLSYQLFEFDLRCIFSPQ-QLVSERLVRGTEAGVPK--------------VSIDGVVR 186
+ L Y+L E D+ C+FS ++V+ LVR + G K +++D
Sbjct: 75 LGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNG 134
Query: 187 WSVPFLTVERTAVQGWIASADGRTMGDVVEGLTFEGEIVGIKCWSQVPHQRSQDVVSKIS 246
+ T+ V + A + + DV L +G G K P + S+D +K++
Sbjct: 135 IKIKGRTIRVDHVANYRAPQESEDVDDVTRELQEKG--CGAKTPPSSPPEVSEDEDAKVT 192
Query: 247 LVFPLCLALWVLAVTLPNRQKKIRRNRKNENERVRVCRMRSCSW--------ERSKSSNK 298
P ++KK ++ K + ER + SCS E+S +
Sbjct: 193 --------------KKPKKEKK-KKKEKEKTERPVQAELPSCSRSKTVKETDEQSAKKHS 237
Query: 299 EGPEEVTTKGENRGKART 316
P E K E R + ++
Sbjct: 238 SKPSERAQKSECRERKKS 255
>ref|NP_001006437.1| nuclear NF-kappaB activating protein [Gallus gallus]
gi|53135712|emb|CAG32450.1| hypothetical protein [Gallus
gallus]
Length = 361
Score = 35.4 bits (80), Expect = 2.4
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 259 AVTLPNRQKKIRRNRKNENERVRVCRMRSCSWERSKSSNKEGPEEVTTKGENRGKA 314
A + R ++ R ++ N R C RS SW RS+ + GP G + GKA
Sbjct: 12 AASPERRGRRSRSRSRSRNGSRRGCHRRSRSWSRSRERSPGGPRASAYHGHHHGKA 67
>ref|NP_702156.1| transcription initiation TFIID-like, putative [Plasmodium
falciparum 3D7] gi|23497335|gb|AAN36880.1| transcription
initiation TFIID-like, putative [Plasmodium falciparum
3D7]
Length = 367
Score = 35.0 bits (79), Expect = 3.1
Identities = 19/53 (35%), Positives = 29/53 (53%), Gaps = 1/53 (1%)
Query: 260 VTLPNRQKKIRR-NRKNENERVRVCRMRSCSWERSKSSNKEGPEEVTTKGENR 311
VTL QK I+ N K E + +C+M++ ++K SN EE+ T G N+
Sbjct: 69 VTLSTVQKYIKYLNNKKEKQNDDICKMKNEQVNQTKHSNNNIKEEIKTNGSNK 121
>ref|XP_325382.1| predicted protein [Neurospora crassa] gi|28921981|gb|EAA31253.1|
predicted protein [Neurospora crassa]
Length = 719
Score = 35.0 bits (79), Expect = 3.1
Identities = 21/62 (33%), Positives = 30/62 (47%)
Query: 264 NRQKKIRRNRKNENERVRVCRMRSCSWERSKSSNKEGPEEVTTKGENRGKARTTVCPRLL 323
+R + R +R R R RS + S SS+ G +T+K E K +T + RLL
Sbjct: 264 DRSRDSRTSRATSRSRRSSRRSRSVASSTSSSSSSSGGTTITSKSEYPKKGKTRIPSRLL 323
Query: 324 SR 325
SR
Sbjct: 324 SR 325
>ref|XP_513272.1| PREDICTED: similar to SPOC domain containing 1 [Pan troglodytes]
Length = 1154
Score = 34.7 bits (78), Expect = 4.0
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 35 TAPCVESLPSGFGLRCGVQDLLGVSPRPCP-MGPRRDSPQQVVSERLVRGTEAGV 88
T P PSG +C ++ LLG P PCP + R+ P V+SE +V G AG+
Sbjct: 757 TLPPTHLPPSG--TKC-LESLLGSVPPPCPSLHSLRELPDPVLSEEVVEGIAAGI 808
>emb|CAI16891.1| novel protein [Homo sapiens] gi|33988379|gb|AAH07910.2| SPOCD1
protein [Homo sapiens]
Length = 342
Score = 34.3 bits (77), Expect = 5.3
Identities = 18/43 (41%), Positives = 26/43 (59%), Gaps = 2/43 (4%)
Query: 47 GLRCGVQDLLGVSPRPCP-MGPRRDSPQQVVSERLVRGTEAGV 88
G +C ++ LLG P PCP + R+ P V+SE +V G AG+
Sbjct: 1 GTKC-LESLLGSVPPPCPGLHSLRELPDPVLSEEVVEGIAAGI 42
>emb|CAB54340.2| Hypothetical protein Y26D4A.2 [Caenorhabditis elegans]
Length = 537
Score = 34.3 bits (77), Expect = 5.3
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 25 SEPMVGVAMVTAPCVESLPSGFGLRCGV 52
+ P G AMV APC ESLP G CGV
Sbjct: 477 NSPWPGYAMVAAPCNESLPDINGFMCGV 504
>ref|NP_493285.1| putative secreted or extracellular protein family member precursor
(1N661) [Caenorhabditis elegans] gi|7509502|pir||T26562
hypothetical protein Y26D4A.2 - Caenorhabditis elegans
Length = 550
Score = 34.3 bits (77), Expect = 5.3
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 25 SEPMVGVAMVTAPCVESLPSGFGLRCGV 52
+ P G AMV APC ESLP G CGV
Sbjct: 490 NSPWPGYAMVAAPCNESLPDINGFMCGV 517
>ref|YP_118643.1| cytochrome P450 monooxygenase [Nocardia farcinica IFM 10152]
gi|54015909|dbj|BAD57279.1| cytochrome P450
monooxygenase [Nocardia farcinica IFM 10152]
Length = 408
Score = 33.9 bits (76), Expect = 6.9
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 89 PKVSIDDVVRWSVPFLTVERTAVQEHSPGNQDLE 122
P+ + D++VRW+ P + +RTA+Q+ G Q ++
Sbjct: 281 PRTAPDEIVRWATPVVAFQRTALQDTELGGQAIK 314
>gb|AAV31206.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 703
Score = 33.5 bits (75), Expect = 9.0
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 248 VFPLCLALWVLAVTLPN--RQKKIRRNRKNENERVRVCRMRSCSWERSKSSNKEGPEEVT 305
+F +C+A L TLPN ++K+ R R+ ++ ++ + R + S+ + E+T
Sbjct: 535 LFGICVACLELPQTLPNLPQRKRSLRERRKLKQKNKINKTRGRPSDLRPSTRRGRRRELT 594
Query: 306 TKGENRGKARTTVCPRLLSRWGRWR 330
+ G+ RT LL R G R
Sbjct: 595 GARKRDGRRRTAAGVELLRRRGSGR 619
>ref|NP_359779.1| hypothetical protein RC0142 [Rickettsia conorii str. Malish 7]
gi|15619186|gb|AAL02680.1| unknown [Rickettsia conorii
str. Malish 7] gi|25503586|pir||F97717 hypothetical
protein RC0142 [imported] - Rickettsia conorii (strain
Malish 7)
Length = 993
Score = 33.5 bits (75), Expect = 9.0
Identities = 23/102 (22%), Positives = 44/102 (42%), Gaps = 7/102 (6%)
Query: 148 QLFEFDLRCIFSPQQLVSERLVRGTEAGVPKVSIDGVVRWSVPFLTVERTAVQGWIASAD 207
+ F L+ IF + + G G P +DG+++W+ PFL + W+ +A
Sbjct: 358 EYINFILKMIFVTYFSIGINITPGN--GSPYDRLDGMIQWAFPFLLDGINGLASWVMNAA 415
Query: 208 GRTMGDVVEGLTFEGEIVGIKCWS----QVPHQRSQDVVSKI 245
+ L+++G + I W +V H D++S +
Sbjct: 416 PSGLCK-FNNLSYDGTVSYIALWDALDCRVAHYLGLDILSTL 456
>gb|EAA25793.1| unknown [Rickettsia sibirica 246] gi|34580904|ref|ZP_00142384.1|
hypothetical protein [Rickettsia sibirica 246]
Length = 992
Score = 33.5 bits (75), Expect = 9.0
Identities = 23/102 (22%), Positives = 44/102 (42%), Gaps = 7/102 (6%)
Query: 148 QLFEFDLRCIFSPQQLVSERLVRGTEAGVPKVSIDGVVRWSVPFLTVERTAVQGWIASAD 207
+ F L+ IF + + G G P +DG+++W+ PFL + W+ +A
Sbjct: 358 EYINFILKMIFVTYFSIGINITPGN--GSPYDRLDGMIQWAFPFLLDGINGLASWVMNAA 415
Query: 208 GRTMGDVVEGLTFEGEIVGIKCWS----QVPHQRSQDVVSKI 245
+ L+++G + I W +V H D++S +
Sbjct: 416 PSGLCK-FNNLSYDGTVSYIALWDALDCRVAHYLGLDILSTL 456
>ref|YP_246105.1| TrbL/VirB6 plasmid Conjugative transfer protein [Rickettsia felis
URRWXCal2] gi|67004014|gb|AAY60940.1| TrbL/VirB6 plasmid
Conjugative transfer protein [Rickettsia felis
URRWXCal2]
Length = 1138
Score = 33.5 bits (75), Expect = 9.0
Identities = 23/102 (22%), Positives = 44/102 (42%), Gaps = 7/102 (6%)
Query: 148 QLFEFDLRCIFSPQQLVSERLVRGTEAGVPKVSIDGVVRWSVPFLTVERTAVQGWIASAD 207
+ F L+ IF + + G G P +DG+++W+ PFL + W+ +A
Sbjct: 358 EYINFILKMIFVTYFSIGINITPGN--GSPYDRLDGMIQWAFPFLLDGINGLASWVMNAA 415
Query: 208 GRTMGDVVEGLTFEGEIVGIKCWS----QVPHQRSQDVVSKI 245
+ L+++G + I W +V H D++S +
Sbjct: 416 PSGLCK-FNNLSYDGTVSYIALWDALDCRVAHYLGLDILSTL 456
>ref|ZP_00349302.1| COG3704: Type IV secretory pathway, VirB6 components [Rickettsia
rickettsii]
Length = 986
Score = 33.5 bits (75), Expect = 9.0
Identities = 23/102 (22%), Positives = 44/102 (42%), Gaps = 7/102 (6%)
Query: 148 QLFEFDLRCIFSPQQLVSERLVRGTEAGVPKVSIDGVVRWSVPFLTVERTAVQGWIASAD 207
+ F L+ IF + + G G P +DG+++W+ PFL + W+ +A
Sbjct: 358 EYINFILKMIFVTYFSIGINITPGN--GSPYDRLDGMIQWAFPFLLDGINGLASWVMNAA 415
Query: 208 GRTMGDVVEGLTFEGEIVGIKCWS----QVPHQRSQDVVSKI 245
+ L+++G + I W +V H D++S +
Sbjct: 416 PSGLCK-FNNLSYDGTVSYIALWDALDCRVAHYLGLDILSTL 456
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 563,767,045
Number of Sequences: 2540612
Number of extensions: 23122083
Number of successful extensions: 53344
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 53333
Number of HSP's gapped (non-prelim): 27
length of query: 331
length of database: 863,360,394
effective HSP length: 128
effective length of query: 203
effective length of database: 538,162,058
effective search space: 109246897774
effective search space used: 109246897774
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0190.5