BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0180b.2
         (57 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAC27841.1| expressed protein [Arabidopsis thaliana] gi|14335...    82  5e-15
dbj|BAD87840.1| unknown protein [Oryza sativa (japonica cultivar...    76  2e-13
ref|XP_463531.1| putative serine/threonine protein kinase [Oryza...    33  2.6
ref|NP_930476.1| hypothetical protein plu3249 [Photorhabdus lumi...    32  3.4

>gb|AAC27841.1| expressed protein [Arabidopsis thaliana]
          gi|14335016|gb|AAK59772.1| At2g39500/F12L6.16
          [Arabidopsis thaliana] gi|7485409|pir||T00560
          hypothetical protein At2g39500 [imported] - Arabidopsis
          thaliana gi|18405073|ref|NP_565907.1| expressed protein
          [Arabidopsis thaliana]
          Length = 55

 Score = 81.6 bits (200), Expect = 5e-15
 Identities = 32/48 (66%), Positives = 42/48 (86%)

Query: 2  ELKNVVKDKKFWVASFLIAWAAALQGHMMWLQRQDSFKHKFRNLDDDD 49
          ++K +VKDK+FW+ASF+I WAA LQGHMMWLQ+Q+SFK KF  +D+DD
Sbjct: 6  DVKTIVKDKRFWIASFIIVWAAGLQGHMMWLQKQESFKQKFGTIDEDD 53


>dbj|BAD87840.1| unknown protein [Oryza sativa (japonica cultivar-group)]
          Length = 55

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 34/49 (69%), Positives = 41/49 (83%), Gaps = 3/49 (6%)

Query: 3  LKNVVKDKKFWVASFLIAWAAALQGHMMWLQRQDSFKHKF---RNLDDD 48
          ++ VVK+K+FWVASFL+ WAAALQGHMMW+QRQD+FK KF    N DDD
Sbjct: 1  MRRVVKEKRFWVASFLLVWAAALQGHMMWMQRQDAFKQKFPSNSNHDDD 49


>ref|XP_463531.1| putative serine/threonine protein kinase [Oryza sativa (japonica
           cultivar-group)] gi|20161445|dbj|BAB90369.1| putative
           receptor protein kinase PERK1 [Oryza sativa (japonica
           cultivar-group)]
          Length = 646

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 15  ASFLIAWAAALQGHMMWLQRQDSFKHKFRNLDDDDRSDEPQPN 57
           ++ L++  AAL   ++W +RQDS + K R L  + R   P+PN
Sbjct: 256 SALLVSVIAAL---LVWRRRQDSIRSKSRRLSGERRLSRPRPN 295


>ref|NP_930476.1| hypothetical protein plu3249 [Photorhabdus luminescens subsp.
          laumondii TTO1] gi|36786566|emb|CAE15623.1| unnamed
          protein product [Photorhabdus luminescens subsp.
          laumondii TTO1]
          Length = 77

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 3  LKNVVKDKKFWVASFLIAWAAALQGHMMW 31
          +K  +KDKK+W ASFLI  A  + G +++
Sbjct: 40 IKKCIKDKKYWRASFLIFAAVLMSGSLIF 68


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.322    0.133    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,917,813
Number of Sequences: 2540612
Number of extensions: 3140955
Number of successful extensions: 5705
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5701
Number of HSP's gapped (non-prelim): 4
length of query: 57
length of database: 863,360,394
effective HSP length: 33
effective length of query: 24
effective length of database: 779,520,198
effective search space: 18708484752
effective search space used: 18708484752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)