BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0177.6
(1032 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 981 0.0
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 978 0.0
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 974 0.0
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 967 0.0
gb|AAC49502.1| Pol [Zea mays] gi|7489803|pir||T04112 pol protein... 961 0.0
gb|AAO73525.1| gag-pol polyprotein [Glycine max] 957 0.0
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 957 0.0
gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 941 0.0
gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana] 938 0.0
gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cult... 934 0.0
ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (jap... 929 0.0
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 926 0.0
ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultiva... 926 0.0
ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica... 925 0.0
emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa (japonica cultivar... 918 0.0
gb|AAP53706.1| hypothetical protein [Oryza sativa (japonica cult... 904 0.0
ref|XP_468929.1| putative polyprotein [Oryza sativa (japonica cu... 887 0.0
ref|NP_912905.1| unnamed protein product [Oryza sativa (japonica... 853 0.0
ref|XP_463224.1| putative integrase [Oryza sativa (japonica cult... 811 0.0
gb|AAP94592.1| retrotransposon Opie-2 [Zea mays] 771 0.0
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 981 bits (2535), Expect = 0.0
Identities = 489/1008 (48%), Positives = 672/1008 (66%), Gaps = 6/1008 (0%)
Query: 9 QSWYLDSGCSRHMTGERRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 68
+ WYLDSGCSRHMTG + ++ V FG KGKI+G G + D P ++ VLL
Sbjct: 560 EDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLL 619
Query: 69 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 128
V GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N Y E +
Sbjct: 620 VKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSS 679
Query: 129 VKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFTKV 188
CL S +E +WH+R GH +R + ++ VRG+PNLK +C CQ K K+
Sbjct: 680 T-CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKM 738
Query: 189 PFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHA 248
+ +TSR LELLH+DL GP++ ES+GGKRY V+VDD+SR+TWV F+ K E+
Sbjct: 739 SHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSETFE 798
Query: 249 VFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 308
VF ++Q EK C I R+RSDHG +FEN +F S GI H+FS TPQQNG+VER
Sbjct: 799 VFKELSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVER 858
Query: 309 KNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISY 368
KNRTLQE AR ML + + WAEA+NTACYI NR+++R T YE+WK KP++ +
Sbjct: 859 KNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKH 918
Query: 369 FHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDK 428
FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T+ ESI+V DD
Sbjct: 919 FHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDL 978
Query: 429 LDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKE 488
+ + + E L NV+D K+ E E D +E+ + +RI HPKE
Sbjct: 979 SPARKKDVEEDVRTLGDNVADAAKSGENAE-NSDSATDESNINQPDKRSSTRIQKMHPKE 1037
Query: 489 LIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSK 548
LI+G+ + V TRS E ++S VS IEPK++ EAL D+ WI AM+EEL QF +
Sbjct: 1038 LIIGDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKR 1093
Query: 549 NDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVA 608
N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q EG+D+ ETFAPVA
Sbjct: 1094 NEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVA 1153
Query: 609 RLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKS 668
RLE+IRLL+ + L+Q+DVKSAFLNGY++EEVYV QP GF D PDHV++LKK+
Sbjct: 1154 RLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKA 1213
Query: 669 LYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQS 728
LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I QIYVDDI+FG +
Sbjct: 1214 LYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNE 1273
Query: 729 LCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAK 788
+ + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QS+Y K ++KKF M ++ +
Sbjct: 1274 MLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKR 1333
Query: 789 TPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTASRPDILFSVHLCARF*SDPRETHLT 848
TP L K++ V Q LYR IGSLLYLTASRPDI ++V +CAR+ ++P+ +HLT
Sbjct: 1334 TPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLT 1393
Query: 849 AVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWA 908
VKRIL+Y+ GT++ G+MY S L GYCDAD+AG +RKSTSG C +LG+NL+SW
Sbjct: 1394 QVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWF 1453
Query: 909 SKRQSTIALSTAEAEYISAAICSTQMLWMKH*LEDYQILESNIPIYCDNTAAISLSKNPI 968
SK+Q+ ++LSTAEAEYI+A +Q++WMK L++Y + + + +YCDN +AI++SKNP+
Sbjct: 1454 SKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPV 1513
Query: 969 LHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRF 1016
HSR KHI++++H+IRD V V+ LK VDT+ Q ADIFTK L ++F
Sbjct: 1514 QHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQF 1561
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 978 bits (2528), Expect = 0.0
Identities = 488/1008 (48%), Positives = 671/1008 (66%), Gaps = 6/1008 (0%)
Query: 9 QSWYLDSGCSRHMTGERRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 68
+ WYLDSGCSRHMTG + ++ V FG KGKI+G G + D P ++ VLL
Sbjct: 558 EDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLL 617
Query: 69 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 128
V GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N Y E +
Sbjct: 618 VKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSS 677
Query: 129 VKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFTKV 188
CL S +E +WH+R GH +R + ++ VRG+PNLK +C CQ K K+
Sbjct: 678 T-CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKM 736
Query: 189 PFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHA 248
+ +TSR LELLH+DL GP++ ES+GGKRY V+VDD+SR+TWVKF+ K E+
Sbjct: 737 SHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVKFIREKSETFE 796
Query: 249 VFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 308
VF ++Q EK C I R+RSDHG +FEN + S GI H+FS TPQQNG+VER
Sbjct: 797 VFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEFCTSEGITHEFSAAITPQQNGIVER 856
Query: 309 KNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISY 368
KNRTLQE AR ML + + WAEA+NTACYI NR+++R T YE+WK KP++ +
Sbjct: 857 KNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKH 916
Query: 369 FHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDK 428
FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T+ ESI+V DD
Sbjct: 917 FHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDL 976
Query: 429 LDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKE 488
+ + + E NV+D K+ E E D +E+ + +RI HPKE
Sbjct: 977 SPARKKDVEEDVRTSGDNVADAAKSGENAE-NSDSATDESNINQPDKRSSTRIQKMHPKE 1035
Query: 489 LIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSK 548
LI+G+ + V TRS E ++S VS IEPK++ EAL D+ WI AM+EEL QF +
Sbjct: 1036 LIIGDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKR 1091
Query: 549 NDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVA 608
N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q EG+D+ ETFAPVA
Sbjct: 1092 NEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVA 1151
Query: 609 RLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKS 668
RLE+IRLL+ + L+Q+DVKSAFLNGY++EEVYV QP GF D PDHV++LKK+
Sbjct: 1152 RLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKA 1211
Query: 669 LYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQS 728
LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I QIYVDDI+FG +
Sbjct: 1212 LYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNE 1271
Query: 729 LCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAK 788
+ + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QS+Y K ++KKF M ++ +
Sbjct: 1272 MLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKR 1331
Query: 789 TPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTASRPDILFSVHLCARF*SDPRETHLT 848
TP L K++ V Q LYR IGSLLYLTASRPDI ++V +CAR+ ++P+ +HLT
Sbjct: 1332 TPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLT 1391
Query: 849 AVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWA 908
VKRIL+Y+ GT++ G+MY S L GYCDAD+AG +RKSTSG C +LG+NL+SW
Sbjct: 1392 QVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWF 1451
Query: 909 SKRQSTIALSTAEAEYISAAICSTQMLWMKH*LEDYQILESNIPIYCDNTAAISLSKNPI 968
SK+Q+ ++LSTAEAEYI+A +Q++WMK L++Y + + + +YCDN +AI++SKNP+
Sbjct: 1452 SKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPV 1511
Query: 969 LHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRF 1016
HSR KHI++++H+IRD V V+ LK VDT+ Q ADIFTK L ++F
Sbjct: 1512 QHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQF 1559
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 974 bits (2517), Expect = 0.0
Identities = 486/1008 (48%), Positives = 670/1008 (66%), Gaps = 6/1008 (0%)
Query: 9 QSWYLDSGCSRHMTGERRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 68
+ WYLDSGCSRHMTG + ++ V FG KGKI+G G + D P ++ VLL
Sbjct: 560 EDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLL 619
Query: 69 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 128
V GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N Y E +
Sbjct: 620 VKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSS 679
Query: 129 VKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFTKV 188
CL S +E +WH+R GH +R + ++ + VRG+PNLK +C CQ K K+
Sbjct: 680 T-CLSSKEDEVRIWHQRFGHLHLRGMKKILDKSAVRGIPNLKIEEGRICGECQIGKQVKM 738
Query: 189 PFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHA 248
+ +TSR LELLH+DL GP++ ES+GGKRY V+VDD+SR+TWV F+ K +
Sbjct: 739 SHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSGTFE 798
Query: 249 VFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 308
VF ++Q EK C I R+RSDHG +FEN +F S GI H+FS TPQQNG+VER
Sbjct: 799 VFKKLSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVER 858
Query: 309 KNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISY 368
KNRTLQE AR ML + + WAEA+NTACYI NR+++R T YE+WK KP++ +
Sbjct: 859 KNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKH 918
Query: 369 FHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDK 428
FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T+ ESI+V DD
Sbjct: 919 FHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDL 978
Query: 429 LDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKE 488
+ + + E NV+D K+ E E D +E+ + +RI HPKE
Sbjct: 979 SPARKKDVEEDVRTSGDNVADAAKSGENAE-NSDSATDESNINQPDKRSSTRIQKMHPKE 1037
Query: 489 LIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSK 548
LI+G+ + V TRS E ++S VS IEPK++ EAL D+ WI AM+EEL QF +
Sbjct: 1038 LIIGDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKR 1093
Query: 549 NDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVA 608
N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q EG+D+ ETFAPVA
Sbjct: 1094 NEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVA 1153
Query: 609 RLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKS 668
RLE+IRLL+ + L+Q+DVKSAFLNGY++EEVYV QP GF D PDHV++LKK+
Sbjct: 1154 RLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKA 1213
Query: 669 LYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQS 728
LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I QIYVDDI+FG +
Sbjct: 1214 LYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNE 1273
Query: 729 LCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAK 788
+ + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QS+Y K ++KKF M ++ +
Sbjct: 1274 MLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKR 1333
Query: 789 TPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTASRPDILFSVHLCARF*SDPRETHLT 848
TP L K++ V QK YR IGSLLYLTASRPDI ++V +CAR+ ++P+ +HL
Sbjct: 1334 TPAPTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLN 1393
Query: 849 AVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWA 908
VKRIL+Y+ GT++ G+MY S L GYCDAD+AG +RKSTSG C +LG+NL+SW
Sbjct: 1394 QVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWF 1453
Query: 909 SKRQSTIALSTAEAEYISAAICSTQMLWMKH*LEDYQILESNIPIYCDNTAAISLSKNPI 968
SK+Q+ ++LSTAEAEYI+A +Q++WMK L++Y + + + +YCDN +AI++SKNP+
Sbjct: 1454 SKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPV 1513
Query: 969 LHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRF 1016
HSR KHI++++H+IRD V V+ LK VDT+ Q ADIFTK L ++F
Sbjct: 1514 QHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQF 1561
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 967 bits (2500), Expect = 0.0
Identities = 486/1010 (48%), Positives = 670/1010 (66%), Gaps = 10/1010 (0%)
Query: 9 QSWYLDSGCSRHMTGERRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 68
+ WYLDSGCSRHMTG + ++ V FG KGKI G G + + P ++ VLL
Sbjct: 561 EDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHEGLPSLNKVLL 620
Query: 69 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 128
V GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N Y E + +
Sbjct: 621 VKGLTVNLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQE-SSHS 679
Query: 129 VKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFTKV 188
CL S +E +WH+R GH +R + ++ VRG+PNLK +C CQ K K+
Sbjct: 680 STCLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKM 739
Query: 189 PFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHA 248
+ +TSR LELLH+DL GP++ ES+GGKRY V+VDD+SR+TWV F+ K ++
Sbjct: 740 SHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFE 799
Query: 249 VFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 308
VF ++Q EK C I R+RSDHG +FEN KF S GI H+FS TPQQNG+VER
Sbjct: 800 VFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVER 859
Query: 309 KNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISY 368
KNRTLQE AR ML + + WAEA+NTACYI NR+++R T YE+WK KP + +
Sbjct: 860 KNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKH 919
Query: 369 FHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDK 428
FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T+ ESI+V DD
Sbjct: 920 FHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDL 979
Query: 429 LDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKS--RITAAHP 486
+ + + E NV+D K+ E E + +E P+ +Q K+ RI HP
Sbjct: 980 TPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDE---PNINQPDKRPSIRIQKMHP 1036
Query: 487 KELIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQF 546
KELI+G+ + V TRS E ++S VS IEPK++ EAL D+ WI AM+EEL QF
Sbjct: 1037 KELIIGDPNRGVTTRSR----EIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQF 1092
Query: 547 SKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAP 606
+N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q EG+D+ ETFAP
Sbjct: 1093 KRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAP 1152
Query: 607 VARLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLK 666
VARLE+IRLL+ + L+Q+DVKSAFLNGY++EE YV QP GF D PDHV++LK
Sbjct: 1153 VARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLK 1212
Query: 667 KSLYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFCKTYKDDILIVQIYVDDIIFGSAN 726
K+LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I QIYVDDI+FG +
Sbjct: 1213 KALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMS 1272
Query: 727 QSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTV 786
+ + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QSKY K ++KKF M ++
Sbjct: 1273 NEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASH 1332
Query: 787 AKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTASRPDILFSVHLCARF*SDPRETH 846
+TP L K++ V Q LYR IGSLLYLTASRPDI ++V +CAR+ ++P+ +H
Sbjct: 1333 KRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISH 1392
Query: 847 LTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVS 906
L VKRIL+Y+ GT++ G+MY S L GYCDAD+AG +RKSTSG C +LG+NL+S
Sbjct: 1393 LNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLIS 1452
Query: 907 WASKRQSTIALSTAEAEYISAAICSTQMLWMKH*LEDYQILESNIPIYCDNTAAISLSKN 966
W SK+Q+ ++LSTAEAEYI+A +Q++WMK L++Y + + + +YCDN +AI++SKN
Sbjct: 1453 WFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKN 1512
Query: 967 PILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRF 1016
P+ HSR KHI++++H+IR+ V V+ L+ VDT+ Q ADIFTK L +F
Sbjct: 1513 PVQHSRTKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFTKALDAKQF 1562
>gb|AAC49502.1| Pol [Zea mays] gi|7489803|pir||T04112 pol protein homolog - maize
retrotransposon Opie-2
Length = 1068
Score = 961 bits (2485), Expect = 0.0
Identities = 509/1058 (48%), Positives = 673/1058 (63%), Gaps = 48/1058 (4%)
Query: 10 SWYLDSGCSRHMTGERRMFRE-LKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDNVL 67
SW +DSGC+ HMTGE++MF +K K + + FG +GK+ G G I + + I NV
Sbjct: 10 SWIIDSGCTNHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAISNEHSISNVF 69
Query: 68 LVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQ 127
LV+ L +NLLS+SQL + GY+ +F + DGS+ F +Y + ++ EA
Sbjct: 70 LVESLGYNLLSVSQLCNMGYNCLFTNIDVSVFRRCDGSLAFKGVLDGKLYLVDFAKEEAG 129
Query: 128 NVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFTK 187
CL++ W+WHRRL H M+ + +L K V GL N++F D C ACQ K
Sbjct: 130 LDACLIAKTSMGWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFEKDRPCAACQAGKQVG 189
Query: 188 VPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESH 247
KNV++TSR LE+LH+DLFGPV SIGG +YG+VIVDD+SR+TWV FL K E+
Sbjct: 190 GSHHTKNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQEKSETQ 249
Query: 248 AVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVE 307
F+ + QNE ++ ++RSD+G +F+N + E + GI H+FS P TPQQNGVVE
Sbjct: 250 GTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVE 309
Query: 308 RKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNIS 367
RKNRTL +MARTML E + FW EAVNTAC+ NR+ + IL T YEL KPN+S
Sbjct: 310 RKNRTLIDMARTMLGEFKTPECFWTEAVNTACHAINRVYLHRILKNTSYELLTGNKPNVS 369
Query: 368 YFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDD 427
YF FG CY+L K R KF K+ + LLGY +K +R +N + +E S V FD+
Sbjct: 370 YFRVFGSKCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSGDVVFDE 429
Query: 428 KLDSDQSKLV-------EKFADLSINVSDKGKAPEEVEPEEDEP---------------- 464
S + ++V E +I G+ + + E ++P
Sbjct: 430 TNGSPREQVVDCDDVDEEDIPTAAIRTMAIGEVRPQEQDEREQPSPSTMVHPPTQDDEQV 489
Query: 465 -----------------EEEAGPSNSQTLKKSRITAAHPKELIMGNKDEPVRTRSAFRPS 507
EEEA P+ T ++ I HP + I+G+ + V TRS
Sbjct: 490 HQQEVCDQGGAQDDHVLEEEAQPA-PPTQVRAMIQRDHPVDQILGDISKGVTTRSRL--- 545
Query: 508 EETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTK 567
VS IEP ++EAL D DW+LAM+EELN F +N+VW+LV +P+ +V+GTK
Sbjct: 546 -VNFCEHNSFVSSIEPFRVEEALLDPDWVLAMQEELNNFKRNEVWTLVPRPKQ-NVVGTK 603
Query: 568 WVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVL 627
WVFRNK +E+G V RNKARLVA+GY+Q G+D+ ETFAPVARLE+IR+L++++ +H+ L
Sbjct: 604 WVFRNKQDERGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHHSFRL 663
Query: 628 HQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFL 687
+Q+DVKSAFLNG I EEVYV QPPGFEDE+ PDHV KL K+LYGLKQAPRAWYE L FL
Sbjct: 664 YQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECLRDFL 723
Query: 688 LENEFERGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMG 747
+ N F+ GK D TLF KT D+ + QIYVDDIIFGS NQ C+EF +M +FEMSMMG
Sbjct: 724 IANAFKVGKADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEMSMMG 783
Query: 748 ELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVC 807
EL YFLG QV Q +GT+I Q+KYT++LLK+F M ++ AKTPM + V
Sbjct: 784 ELNYFLGFQVKQLKDGTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVD 843
Query: 808 QKLYRGTIGSLLYLTASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMY 867
QK YR IGSLLYL ASRPDI+ SV +CARF SDP+E HL AVKRILRYL T GL Y
Sbjct: 844 QKAYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCFGLWY 903
Query: 868 KKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISA 927
K S + L GY D+DYAG + +RKSTSG CQFLG +LVSW SK+Q+++ALSTAEAEY++A
Sbjct: 904 PKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAEYVAA 963
Query: 928 AICSTQMLWMKH*LEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV 987
C Q+LWM+ L D+ S +P+ CDN +AI +++NP+ HSR KHI++++HF+RD+
Sbjct: 964 GQCCAQLLWMRQTLRDFGYNLSKVPLLCDNESAIRMAENPVEHSRTKHIDIRHHFLRDHQ 1023
Query: 988 QKGVLLLKFVDTDHQWADIFTKPLAEDRFNFILKNLNM 1025
QKG + + V T++Q ADIFTKPL E F + LN+
Sbjct: 1024 QKGDIEVFHVSTENQLADIFTKPLDEKTFCRLRSELNV 1061
>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 957 bits (2474), Expect = 0.0
Identities = 482/1010 (47%), Positives = 664/1010 (65%), Gaps = 10/1010 (0%)
Query: 9 QSWYLDSGCSRHMTGERRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 68
+ WYLDSGCSRHMTG + ++ V FG KGKI G G + D P ++ VLL
Sbjct: 560 EDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHDGLPSLNKVLL 619
Query: 69 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 128
V GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N Y E +
Sbjct: 620 VKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSS 679
Query: 129 VKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFTKV 188
CL S +E +WH+R GH +R + ++ VRG+PNLK +C CQ K K+
Sbjct: 680 T-CLSSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKM 738
Query: 189 PFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHA 248
+ +TS LELLH+DL GP++ ES+GGKRY V+VDD+SR+TWV F+ K ++
Sbjct: 739 SHQKLQHQTTSMVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFE 798
Query: 249 VFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 308
VF ++Q EK C I R+RSDHG +FEN KF S GI H+FS TPQQNG+VER
Sbjct: 799 VFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVER 858
Query: 309 KNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISY 368
KNRTLQE R ML + + WAEA+NTACYI NR+++R T YE+WK KP + +
Sbjct: 859 KNRTLQEATRVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKH 918
Query: 369 FHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDK 428
FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T+ ESI+V DD
Sbjct: 919 FHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDL 978
Query: 429 LDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKS--RITAAHP 486
+ + + E NV+D K+ E E + +E P+ +Q K RI P
Sbjct: 979 TPARKKDVEEDVRTSEDNVADTAKSAENAEKSDSTTDE---PNINQPDKSPFIRIQKMQP 1035
Query: 487 KELIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQF 546
KELI+G+ + V TRS E ++S VS IEPK++ EAL D+ WI AM+EEL QF
Sbjct: 1036 KELIIGDPNRGVTTRSR----EIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQF 1091
Query: 547 SKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAP 606
+N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q EG+D+ ETFAP
Sbjct: 1092 KRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAP 1151
Query: 607 VARLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLK 666
VARLE+IRLL+ + L+Q+DVKSAFLNGY++EE YV QP GF D DHV++LK
Sbjct: 1152 VARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHLDHVYRLK 1211
Query: 667 KSLYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFCKTYKDDILIVQIYVDDIIFGSAN 726
K+LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I QIYVDDI+FG +
Sbjct: 1212 KALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMS 1271
Query: 727 QSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTV 786
+ + F MQ+EFEMS++GEL YFLG+QV Q + ++ QSKY K ++KKF M ++
Sbjct: 1272 NEMLRHFVPQMQSEFEMSLVGELHYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASH 1331
Query: 787 AKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTASRPDILFSVHLCARF*SDPRETH 846
+TP L K++ V Q LYR IGSLLYLTASRPDI F+V +CAR+ ++P+ +H
Sbjct: 1332 KRTPAPTHLKLSKDEAGTSVDQNLYRSMIGSLLYLTASRPDITFAVGVCARYQANPKISH 1391
Query: 847 LTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVS 906
L VKRIL+Y+ GT++ G+MY S+ L GYCDAD+AG +RK TSG C +LG+NL+S
Sbjct: 1392 LNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSADDRKCTSGGCFYLGTNLIS 1451
Query: 907 WASKRQSTIALSTAEAEYISAAICSTQMLWMKH*LEDYQILESNIPIYCDNTAAISLSKN 966
W SK+Q+ ++LSTAEAEYI+A +Q++WMK L++Y + + + +YCDN +AI++SKN
Sbjct: 1452 WFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKN 1511
Query: 967 PILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRF 1016
P+ H+R KHI++++H+IRD V ++ L+ VDT+ Q ADIFTK L ++F
Sbjct: 1512 PVQHNRTKHIDIRHHYIRDLVDDKIITLEHVDTEEQVADIFTKALDANQF 1561
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 957 bits (2473), Expect = 0.0
Identities = 483/1010 (47%), Positives = 665/1010 (65%), Gaps = 10/1010 (0%)
Query: 9 QSWYLDSGCSRHMTGERRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 68
+ WYLDSGCSRHMTG + ++ V FG KGKI G G + D P ++ VLL
Sbjct: 534 EDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHDGLPSLNKVLL 593
Query: 69 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 128
V GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N Y E +
Sbjct: 594 VKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSS 653
Query: 129 VKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFTKV 188
CL S +E +WH+R GH +R + ++ VRG+PNLK +C CQ K K+
Sbjct: 654 T-CLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKM 712
Query: 189 PFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHA 248
+ +TSR LELLH+DL GP++ ES+G KRY V+VDD+SR+TWV F+ K ++
Sbjct: 713 SNQKLQHQTTSRVLELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFTWVNFIREKSDTFE 772
Query: 249 VFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 308
VF ++Q EK C I R+RSDHG +FEN KF S GI H+FS TPQQNG+VER
Sbjct: 773 VFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVER 832
Query: 309 KNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISY 368
KNRTLQE AR ML + + WAEA+NTACYI NR+++R T YE+WK KP + +
Sbjct: 833 KNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKH 892
Query: 369 FHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDK 428
FH G CY+L +++ K D KS + LGYS S+ +R +N+ +T+ ESI+V DD
Sbjct: 893 FHICGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDL 952
Query: 429 LDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKS--RITAAHP 486
+ + + E NV+D K+ E E + +E P+ +Q K+ RI HP
Sbjct: 953 TPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDE---PNINQPDKRPSIRIQKMHP 1009
Query: 487 KELIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQF 546
KELI+G+ + V TRS E ++S VS IEPK++ EAL D+ WI AM+EEL QF
Sbjct: 1010 KELIIGDPNRGVTTRSR----EIEIISNSCFVSKIEPKNVKEALTDEFWINAMQEELEQF 1065
Query: 547 SKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAP 606
+N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q EG+D+ ETFAP
Sbjct: 1066 KRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAP 1125
Query: 607 VARLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLK 666
ARLE+IRLL+ + L+Q+DVKSAFLNGY++EE YV QP GF D PDHV++LK
Sbjct: 1126 GARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLK 1185
Query: 667 KSLYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFCKTYKDDILIVQIYVDDIIFGSAN 726
K+LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I QIYVDDI+FG +
Sbjct: 1186 KALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMS 1245
Query: 727 QSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTV 786
+ + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QSKY K ++KKF M ++
Sbjct: 1246 NEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASH 1305
Query: 787 AKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTASRPDILFSVHLCARF*SDPRETH 846
+TP L K++ V Q LYR IGSLLYLTASRPDI ++V CAR+ ++P+ +H
Sbjct: 1306 KRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGGCARYQANPKISH 1365
Query: 847 LTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVS 906
L VKRIL+Y+ GT++ G+MY S+ L GYCDAD+AG +RKST G C +LG+N +S
Sbjct: 1366 LNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSVDDRKSTFGGCFYLGTNFIS 1425
Query: 907 WASKRQSTIALSTAEAEYISAAICSTQMLWMKH*LEDYQILESNIPIYCDNTAAISLSKN 966
W SK+Q+ ++LSTAEAEYI+A +Q++WMK L++Y + + + +YCDN +AI++SKN
Sbjct: 1426 WFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNLSAINISKN 1485
Query: 967 PILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRF 1016
P+ HSR KHI++++H+IRD V V+ L+ VDT+ Q ADIFTK L ++F
Sbjct: 1486 PVQHSRTKHIDIRHHYIRDLVDDKVITLEHVDTEEQIADIFTKALDANQF 1535
>gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902324|ref|NP_912508.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2011
Score = 941 bits (2432), Expect = 0.0
Identities = 501/1044 (47%), Positives = 670/1044 (63%), Gaps = 49/1044 (4%)
Query: 11 WYLDSGCSRHMTGERRMFRELKLKPGG----EVGFGGNEKGKIVGTGTICVDSSPCIDNV 66
W LDSGC++HMTG+R MF ++ GG +V FG N KGK++G G I + + IDNV
Sbjct: 558 WVLDSGCTQHMTGDRAMFTTFEV--GGNEQEKVTFGDNSKGKVIGLGKIAISNDLSIDNV 615
Query: 67 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 126
LV L NLLS++Q+ D F + S +D S +F R N+Y + EA
Sbjct: 616 SLVKSLNFNLLSVAQICDLVLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYLGDFNSSEA 675
Query: 127 QNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFT 186
CL++ W+WHRRL H M ++S+LSK +LV GL ++KF D LC ACQ K
Sbjct: 676 NLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGKQV 735
Query: 187 KVPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDES 246
K+++STSR LELLH++ FGP +SIGG + +VIVDDYSR+TW+ FL K
Sbjct: 736 ACSHPTKSIMSTSRPLELLHMEFFGPTTYKSIGGNSHCLVIVDDYSRYTWMFFLHDKSIV 795
Query: 247 HAVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVV 306
+F F + QNE C +V++RSD+G KF+N E D GI H+ S +PQQNGVV
Sbjct: 796 AELFKKFAKRGQNEFNCTLVKIRSDNGSKFKNTNIEDYCDDLGIKHELSATYSPQQNGVV 855
Query: 307 ERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNI 366
E KNRTL EMARTML E G++ FWAEA+NTAC+ NR+ + +L KT YEL KPN+
Sbjct: 856 EMKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRLLKKTSYELIVGRKPNV 915
Query: 367 SYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFD 426
+YF FGC CY+ RL KF+++ + LLGY+ SK +R YN + +EE+ V+FD
Sbjct: 916 AYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGIVEETADVQFD 975
Query: 427 DKLDSDQS-KLVEKFADLSI-----NVSDKGKAPEEVEPE-----EDEPEEEAGPSNSQT 475
+ S + + ++ D + N+S P EVE + +DEP A PS +Q
Sbjct: 976 ETNGSQEGHENLDDVGDEGLMRAMKNMSIGDVKPIEVEDKPSTSTQDEPSTSATPSQAQV 1035
Query: 476 LKK--------------SRITAAHPKELIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLI 521
+ + ++ HP + ++G+ + V+TRS ++ VS +
Sbjct: 1036 EVEEEKAQDLPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRV----ASICEHYSFVSCL 1091
Query: 522 EPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVV 581
EPK +DEAL D DWI AM +ELN F++N VW+LV++ +VIGTKWVFRNK +E G VV
Sbjct: 1092 EPKHVDEALCDPDWINAMHKELNNFARNKVWTLVERLRDHNVIGTKWVFRNKQDENGLVV 1151
Query: 582 RNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYI 641
RNKAR VAQG++Q EG+D+ ETFAPV RLEAI +L++F+ NI L Q+DVKSAFLNG I
Sbjct: 1152 RNKARFVAQGFTQVEGLDFGETFAPVTRLEAICILLAFASCFNIKLFQMDVKSAFLNGEI 1211
Query: 642 SEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKVDTTL 701
+E V+V QPPGFED K P+HV+KL K+LYGLKQAPRAWYERL FLL +F+ GKVDTTL
Sbjct: 1212 AELVFVEQPPGFEDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTL 1271
Query: 702 FCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTP 761
F K DD + QIYVDDIIFG N+ CKEF +MM EFEMSM+GEL +F G+Q+ Q
Sbjct: 1272 FTKIIGDDFFVCQIYVDDIIFGCTNEVFCKEFGDMMSREFEMSMIGELSFFHGLQIKQLK 1331
Query: 762 EGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYL 821
+GT F + ++ KTPM L+ ++ V KLYR IGSLLYL
Sbjct: 1332 DGT--------------FGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYL 1377
Query: 822 TASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDA 881
TASRPDI+FSV +CARF + P+E HL AVKRILRYLK ++ +GL Y K +++KL GY D+
Sbjct: 1378 TASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDS 1437
Query: 882 DYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKH*L 941
DYAG + +RKSTSG+CQ LG +LVSW+SK+Q+ +AL AEAEY+SA C Q+LWMK L
Sbjct: 1438 DYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNFVALFIAEAEYVSAGSCCAQLLWMKQIL 1497
Query: 942 EDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDH 1001
DY I + P+ C+N +AI ++ NP+ HSR KHI++++HF+RD+V K +++ + T+
Sbjct: 1498 LDYGISFTKTPLLCENDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTED 1557
Query: 1002 QWADIFTKPLAEDRFNFILKNLNM 1025
Q ADIFTKPL E RF + LN+
Sbjct: 1558 QLADIFTKPLDETRFCKLRNELNL 1581
>gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
Length = 1643
Score = 938 bits (2425), Expect = 0.0
Identities = 479/1035 (46%), Positives = 667/1035 (64%), Gaps = 28/1035 (2%)
Query: 11 WYLDSGCSRHMTGERRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLLVD 70
WY DSG SRHMTG + V FGG KG+I G G + P + NV V+
Sbjct: 614 WYFDSGASRHMTGSQANLNNYSSVKESNVMFGGGAKGRIKGKGDLTETEKPHLTNVYFVE 673
Query: 71 GLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVK 130
GLT NL+S+SQL D+G V FN+ C A ++ + + L + NN Y ++
Sbjct: 674 GLTANLISVSQLCDEGLTVSFNKVKCWATNERNQNTLTGVRTGNNCYMWEEPKI------ 727
Query: 131 CLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFTKVPF 190
CL + E+ +WH+RLGH + R +S+L +VRG+P LK +C AC + K +V
Sbjct: 728 CLRAEKEDPVLWHQRLGHMNARSMSKLVNKEMVRGVPELKHIEKIVCGACNQGKQIRVQH 787
Query: 191 KAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVF 250
K + T++ L+L+H+DL GP++TESI GKRY V+VDD+SR+ WV+F+ K E+ F
Sbjct: 788 KRVEGIQTTQVLDLIHMDLMGPMQTESIAGKRYVFVLVDDFSRYAWVRFIREKSETANSF 847
Query: 251 STFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKN 310
Q++NEK I ++RSD GG+F N+ F S +S GI H +S PRTPQ NGVVERKN
Sbjct: 848 KILALQLKNEKKMGIKQIRSDRGGEFMNEAFNSFCESQGIFHQYSAPRTPQSNGVVERKN 907
Query: 311 RTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFH 370
RTLQEMAR M+ G+ + FWAEA++TACY+ NR+ VR +KTPYE+WK KPN+SYF
Sbjct: 908 RTLQEMARAMIHGNGVPEKFWAEAISTACYVINRVYVRLGSDKTPYEIWKGKKPNLSYFR 967
Query: 371 PFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKLD 430
FGCVCY++N KD+L KFD++S + LGY+ S +R +N IEES++V FDD
Sbjct: 968 VFGCVCYIMNDKDQLGKFDSRSEEGFFLGYATNSLAYRVWNKQRGKIEESMNVVFDDGSM 1027
Query: 431 SDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELI 490
+ +V + ++S+ ++ ++G + + + +++ H + I
Sbjct: 1028 PELQIIVRNRNEPQTSISNNHGEERNDNQFDNGDINKSGEESDEEVPPAQVHRDHASKDI 1087
Query: 491 MGNKD-------------------EPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQ 531
+G+ + R ++F EE + S VS++EPK++ EAL+
Sbjct: 1088 IGDPSGERVTRGVKQDYRQLAGIKQKHRVMASFACFEEIMFSC--FVSIVEPKNVKEALE 1145
Query: 532 DKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQG 591
D WILAMEEEL +FS++ VW LV +P V+VIGTKW+F+NK +E G++ RNKARLVAQG
Sbjct: 1146 DHFWILAMEEELEEFSRHQVWDLVPRPPQVNVIGTKWIFKNKFDEVGNITRNKARLVAQG 1205
Query: 592 YSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISEEVYVHQPP 651
Y+Q EG+D+ ETFAPVARLE IR L+ + LHQ+DVK AFLNG I EEVYV QP
Sbjct: 1206 YTQVEGLDFDETFAPVARLECIRFLLGTACGMGFKLHQMDVKCAFLNGIIEEEVYVEQPK 1265
Query: 652 GFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFCKTYKDDIL 711
GFE+ + P++V+KLKK+LYGLKQAPRAWYERL++FL+ + RG VD TLF K I+
Sbjct: 1266 GFENLEFPEYVYKLKKALYGLKQAPRAWYERLTTFLIVQGYTRGSVDKTLFVKNDVHGII 1325
Query: 712 IVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKY 771
I+QIYVDDI+FG + L K F + M EF MSM+GELKYFLG+Q++QT EG I QS Y
Sbjct: 1326 IIQIYVDDIVFGGTSDKLVKTFVKTMTTEFRMSMVGELKYFLGLQINQTDEGITISQSTY 1385
Query: 772 TKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTASRPDILFS 831
+ L+K+F M S A TPM T L K++K KV +KLYRG IGSLLYLTA+RPD+ S
Sbjct: 1386 AQNLVKRFGMCSSKPAPTPMSTTTKLFKDEKGVKVDEKLYRGMIGSLLYLTATRPDLCLS 1445
Query: 832 VHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERK 891
V LCAR+ S+P+ +HL AVKRI++Y+ GT N GL Y + + L GYCDAD+ G+ +R+
Sbjct: 1446 VGLCARYQSNPKASHLLAVKRIIKYVSGTINYGLNYTRDTSLVLVGYCDADWGGNLDDRR 1505
Query: 892 STSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKH*LEDY-QILESN 950
ST+G FLGSNL+SW SK+Q+ ++LS+ ++EYI+ C TQ+LWM+ DY
Sbjct: 1506 STTGGVFFLGSNLISWHSKKQNCVSLSSTQSEYIALGSCCTQLLWMRQMGLDYGMTFPDP 1565
Query: 951 IPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKP 1010
+ + CDN +AI++SKNP+ HS KHI +++HF+R+ V++ + ++ V T+ Q DIFTKP
Sbjct: 1566 LLVKCDNESAIAISKNPVQHSVTKHIAIRHHFVRELVEEKQITVEHVPTEIQLVDIFTKP 1625
Query: 1011 LAEDRFNFILKNLNM 1025
L + F + K+L +
Sbjct: 1626 LDLNTFVNLQKSLGI 1640
>gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1577
Score = 934 bits (2415), Expect = 0.0
Identities = 494/1042 (47%), Positives = 666/1042 (63%), Gaps = 47/1042 (4%)
Query: 11 WYLDSGCSRHMTGERRMFR--ELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 68
W LDSGC++HMTG+R MF E+ +V FG N KGK++G G I + + IDNV L
Sbjct: 549 WVLDSGCTQHMTGDRAMFTTFEVGRNEQEKVTFGDNSKGKVIGLGKIAISNDLSIDNVSL 608
Query: 69 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 128
V L NLLS++Q+ D F + S +D S +F R N+Y + + EA
Sbjct: 609 VKSLNFNLLSVAQICDLSLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYLVDFNSSEANL 668
Query: 129 VKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFTKV 188
CL++ W+WHRRL H M ++S+ SK +LV GL ++KF D LC ACQ K
Sbjct: 669 KTCLVAKTSLGWLWHRRLAHVGMNQLSKFSKRDLVMGLKDVKFEKDKLCSACQAGKQVAC 728
Query: 189 PFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHA 248
K+++STS+ LELLH+DLF P +SIGG + +VIVDDYSR+TWV FL K
Sbjct: 729 SHPTKSIMSTSKPLELLHMDLFDPTTYKSIGGNSHCLVIVDDYSRYTWVFFLHDKSIVAD 788
Query: 249 VFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 308
+F F + QNE +C +V++RS+ G +F+N E D GI H+ +PQQNGVVER
Sbjct: 789 LFKKFAKRAQNEFSCTLVKIRSNIGSEFKNTNIEDYCDDLGIKHELFATYSPQQNGVVER 848
Query: 309 KNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISY 368
KNRTL EMARTML E G++ FWAEA+NTAC+ NR+ + +L KT YE+ KPNI+Y
Sbjct: 849 KNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRVLKKTSYEVIVGRKPNIAY 908
Query: 369 FHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDK 428
F FGC CY+ RL KF+++ + LLGY+ +SK +R YN + +EE+ V+FD+
Sbjct: 909 FRVFGCKCYIHRKGVRLTKFESRCDEGFLLGYASKSKAYRVYNKNKGIVEETADVQFDET 968
Query: 429 LDSDQS-KLVEKFADLSI-----NVSDKGKAPEEVEPE-----EDEPEEEAGPSNSQTLK 477
S + + ++ D + N+S P EVE + +DEP A PS +Q
Sbjct: 969 NGSQEGHENLDDVGDEGLMRVMKNMSIGDVKPIEVEDKPSTSTQDEPSTSAMPSQAQVEV 1028
Query: 478 KSR--------------ITAAHPKELIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEP 523
+ ++ HP + ++G+ + V+TRS ++ VS +E
Sbjct: 1029 EEEKAQEPPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVT----SICEHYSFVSCLER 1084
Query: 524 KSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRN 583
K +DEAL D DW+ AM EEL F++N VW+LV++P +VIGTKWVFRNK +E G VVRN
Sbjct: 1085 KHVDEALCDPDWMNAMHEELKNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGLVVRN 1144
Query: 584 KARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISE 643
KARLVAQG++Q EG+D+ ETFAPVARLEAI +L++F+ +I L Q+DVKSAFLN
Sbjct: 1145 KARLVAQGFTQVEGLDFGETFAPVARLEAICILLAFASCFDIKLFQMDVKSAFLN----- 1199
Query: 644 EVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFC 703
D K P+HV+KL K+LYGL+QAPRAWYERL FLL +F+ GKVD TLF
Sbjct: 1200 -----------DTKYPNHVYKLSKALYGLRQAPRAWYERLRDFLLSKDFKIGKVDITLFT 1248
Query: 704 KTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEG 763
K DD + QIYVDDIIFGS N+ CKEF +MM EFEMSM+GEL +FLG+Q+ Q G
Sbjct: 1249 KIIGDDFFVYQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKNG 1308
Query: 764 TYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTA 823
T++ Q+KY K+LLK+F + ++ KTPM L+ ++ V KLYR IGSLLYLT
Sbjct: 1309 TFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTV 1368
Query: 824 SRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADY 883
SRPDI+FSV +CARF + P+E HL AVKRILRYLK ++ +GL Y K +++KL GY D DY
Sbjct: 1369 SRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDPDY 1428
Query: 884 AGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKH*LED 943
AG + +RKSTS +CQ LG +LVSW+SK+Q+++ALSTAE EY+SA C Q+LWMK L D
Sbjct: 1429 AGCKVDRKSTSSSCQMLGRSLVSWSSKKQNSVALSTAETEYVSAGSCCAQLLWMKQTLLD 1488
Query: 944 YQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQW 1003
Y I + P+ CDN AI ++ NP+ HSR KHI++++HF+RD+V K +++ + T+ Q
Sbjct: 1489 YGISFTKTPLLCDNDGAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQL 1548
Query: 1004 ADIFTKPLAEDRFNFILKNLNM 1025
ADIFTKPL E RF + LN+
Sbjct: 1549 ADIFTKPLDETRFCKLRNELNI 1570
>ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)]
gi|28269414|gb|AAO37957.1| putative gag-pol polyprotein
[Oryza sativa (japonica cultivar-group)]
Length = 1969
Score = 929 bits (2401), Expect = 0.0
Identities = 488/1048 (46%), Positives = 661/1048 (62%), Gaps = 38/1048 (3%)
Query: 7 KHQSWYLDSGCSRHMTGERRMFRELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 65
+ SW +DSGCSRHMTGE + F L G E + FG G+++ GTI V+ + +
Sbjct: 750 RSNSWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKD 809
Query: 66 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 125
V LV L +NLLS+SQL D+ +V F + R + + V F+ R ++
Sbjct: 810 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 868
Query: 126 AQNVKCLL-SVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDK 184
+CL+ S N + + WHRRLGH +S++S ++L+RGLP LK D +C C+ K
Sbjct: 869 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVQKDLVCAPCRHGK 928
Query: 185 FTKVPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 244
T K +V T +LLH+D GP + +S+GGK Y +V+VDD+SR++WV FL K+
Sbjct: 929 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 988
Query: 245 ESHAVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNG 304
E+ F + + E + +RSD+G +F+N FES DS G+ H FS P PQQNG
Sbjct: 989 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1048
Query: 305 VVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 364
VVERKNRTL EMARTML E + FW EA++ AC+I NR+ +R IL+KTPYEL +P
Sbjct: 1049 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1108
Query: 365 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVR 424
+S+ FGC C+VL + + L KF+++S + LGY+ S+ +R Y I E+ V
Sbjct: 1109 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1167
Query: 425 FDDKL---------------------DSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDE 463
FD+ D D + D + V + G +P P D
Sbjct: 1168 FDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 1226
Query: 464 PE------EEAGPSNSQTLKKSRITAAHPKELIMGNKDEPVRTRSAFRPSEETLLSLKGL 517
P EE S I HP + ++G E V ++ L
Sbjct: 1227 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYE------LVNSAF 1280
Query: 518 VSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEK 577
V+ EPK++ AL D++W+ AM EEL F +N VWSLV+ P +VIGTKWVF+NKL E
Sbjct: 1281 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 1340
Query: 578 GDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFL 637
G +VRNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+L++F+ + L Q+DVKSAFL
Sbjct: 1341 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1400
Query: 638 NGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKV 697
NG I EEVYV QPPGFE+ K P+HVFKL+K+LYGLKQAPRAWYERL +FLL+N FE G V
Sbjct: 1401 NGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1460
Query: 698 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQV 757
D TLF D L+VQIYVDDIIFG ++ +L +F ++M EFEMSMMGEL +FLG+Q+
Sbjct: 1461 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1520
Query: 758 DQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGS 817
QT EG ++HQ+KY+KELLKKF+M + TPM T L ++ +V Q+ YR IGS
Sbjct: 1521 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1580
Query: 818 LLYLTASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSG 877
LLYLTASRPDI FSV LCARF + PR +H AVKRI RY+K T G+ Y +S +
Sbjct: 1581 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRA 1640
Query: 878 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWM 937
+ DAD+AG + +RKSTSG C FLG++LVSW+S++QS++A STAEAEY++AA +Q+LWM
Sbjct: 1641 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWM 1700
Query: 938 KH*LEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFV 997
L+DY + S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V+KG ++L+FV
Sbjct: 1701 ISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFV 1760
Query: 998 DTDHQWADIFTKPLAEDRFNFILKNLNM 1025
+++ Q ADIFTKPL RF F+ L +
Sbjct: 1761 ESEKQLADIFTKPLDRSRFEFLRSELGV 1788
>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902378|ref|NP_912535.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2145
Score = 926 bits (2392), Expect = 0.0
Identities = 486/1048 (46%), Positives = 660/1048 (62%), Gaps = 38/1048 (3%)
Query: 7 KHQSWYLDSGCSRHMTGERRMFRELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 65
+ SW +DSGCSRHMTGE + F L E + FG G+++ GTI V+ + +
Sbjct: 750 RSNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKD 809
Query: 66 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 125
V LV L +NLLS+SQL D+ +V F + R + + V F+ R ++
Sbjct: 810 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 868
Query: 126 AQNVKCLL-SVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDK 184
+CL+ S N + + WHRRLGH +S++S ++L+RGLP LK D +C C+ K
Sbjct: 869 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGK 928
Query: 185 FTKVPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 244
T K +V T +LLH+D GP + +S+GGK Y +V+VDD+SR++WV FL K+
Sbjct: 929 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 988
Query: 245 ESHAVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNG 304
E+ F + + E + +RSD+G +F+N FES DS G+ H FS P PQQNG
Sbjct: 989 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1048
Query: 305 VVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 364
VVERKNRTL EMARTML E + FW EA++ AC+I NR+ +R IL+KTPYEL +P
Sbjct: 1049 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1108
Query: 365 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVR 424
+S+ FGC C+VL + + L KF+++S + LGY+ S+ +R Y I E+ V
Sbjct: 1109 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1167
Query: 425 FDDKL---------------------DSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDE 463
FD+ D D + D + V + G +P P D
Sbjct: 1168 FDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 1226
Query: 464 PE------EEAGPSNSQTLKKSRITAAHPKELIMGNKDEPVRTRSAFRPSEETLLSLKGL 517
P EE S I HP + ++G E V ++ L
Sbjct: 1227 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYE------LVNSAF 1280
Query: 518 VSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEK 577
V+ EPK++ AL D++W+ AM EEL F +N VWSLV+ P +VIGTKWVF+NKL E
Sbjct: 1281 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 1340
Query: 578 GDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFL 637
G +VRNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+L++F+ + L Q+DVKSAFL
Sbjct: 1341 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1400
Query: 638 NGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKV 697
NG I EEVYV QPPGFE+ K P+HVFKL+K+LYGLKQAPRAWYERL +FLL+N FE G V
Sbjct: 1401 NGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1460
Query: 698 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQV 757
D TLF D L+VQIYVDDIIFG ++ +L +F ++M EFEMSMMGEL +FLG+Q+
Sbjct: 1461 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1520
Query: 758 DQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGS 817
QT EG ++HQ+KY+KELLKKF+M + TPM T L ++ +V Q+ YR IGS
Sbjct: 1521 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1580
Query: 818 LLYLTASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSG 877
LLYLTASRPDI FSV LCARF + PR +H AVKR+ RY+K T G+ Y +S +
Sbjct: 1581 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRA 1640
Query: 878 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWM 937
+ DAD+AG + +RKSTSG C FLG++LVSW+S++QS++A STAEAEY++AA +Q+LWM
Sbjct: 1641 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWM 1700
Query: 938 KH*LEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFV 997
L+DY + S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V+KG ++L+FV
Sbjct: 1701 ISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFV 1760
Query: 998 DTDHQWADIFTKPLAEDRFNFILKNLNM 1025
+++ Q ADIFTKPL RF F+ L +
Sbjct: 1761 ESEKQLADIFTKPLDRSRFEFLRSELGV 1788
>ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultivar-group)]
gi|32488723|emb|CAE03600.1| OSJNBb0004A17.2 [Oryza sativa
(japonica cultivar-group)]
Length = 1877
Score = 926 bits (2392), Expect = 0.0
Identities = 486/1048 (46%), Positives = 660/1048 (62%), Gaps = 38/1048 (3%)
Query: 7 KHQSWYLDSGCSRHMTGERRMFRELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 65
+ SW +DSGCSRHMTGE + F L E + FG G+++ GTI V+ + +
Sbjct: 832 RSNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKD 891
Query: 66 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 125
V LV L +NLLS+SQL D+ +V F + R + + V F+ R ++
Sbjct: 892 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 950
Query: 126 AQNVKCLL-SVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDK 184
+CL+ S N + + WHRRLGH +S++S ++L+RGLP LK D +C C+ K
Sbjct: 951 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGK 1010
Query: 185 FTKVPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 244
T K +V T +LLH+D GP + +S+GGK Y +V+VDD+SR++WV FL K+
Sbjct: 1011 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 1070
Query: 245 ESHAVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNG 304
E+ F + + E + +RSD+G +F+N FES DS G+ H FS P PQQNG
Sbjct: 1071 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1130
Query: 305 VVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 364
VVERKNRTL EMARTML E + FW EA++ AC+I NR+ +R IL+KTPYEL +P
Sbjct: 1131 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1190
Query: 365 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVR 424
+S+ FGC C+VL + + L KF+++S + LGY+ S+ +R Y I E+ V
Sbjct: 1191 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1249
Query: 425 FDDKL---------------------DSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDE 463
FD+ D D + D + V + G +P P D
Sbjct: 1250 FDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 1308
Query: 464 PE------EEAGPSNSQTLKKSRITAAHPKELIMGNKDEPVRTRSAFRPSEETLLSLKGL 517
P EE S I HP + ++G E V ++ L
Sbjct: 1309 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYE------LVNSAF 1362
Query: 518 VSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEK 577
V+ EPK++ AL D++W+ AM EEL F +N VWSLV+ P +VIGTKWVF+NKL E
Sbjct: 1363 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 1422
Query: 578 GDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFL 637
G +VRNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+L++F+ + L Q+DVKSAFL
Sbjct: 1423 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1482
Query: 638 NGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKV 697
NG I EEVYV QPPGFE+ K P+HVFKL+K+LYGLKQAPRAWYERL +FLL+N FE G V
Sbjct: 1483 NGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1542
Query: 698 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQV 757
D TLF D L+VQIYVDDIIFG ++ +L +F ++M EFEMSMMGEL +FLG+Q+
Sbjct: 1543 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1602
Query: 758 DQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGS 817
QT EG ++HQ+KY+KELLKKF+M + TPM T L ++ +V Q+ YR IGS
Sbjct: 1603 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1662
Query: 818 LLYLTASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSG 877
LLYLTASRPDI FSV LCARF + PR +H AVKR+ RY+K T G+ Y +S +
Sbjct: 1663 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRA 1722
Query: 878 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWM 937
+ DAD+AG + +RKSTSG C FLG++LVSW+S++QS++A STAEAEY++AA +Q+LWM
Sbjct: 1723 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWM 1782
Query: 938 KH*LEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFV 997
L+DY + S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V+KG ++L+FV
Sbjct: 1783 ISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFV 1842
Query: 998 DTDHQWADIFTKPLAEDRFNFILKNLNM 1025
+++ Q ADIFTKPL RF F+ L +
Sbjct: 1843 ESEKQLADIFTKPLDRSRFEFLRSELGV 1870
>ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1410
Score = 925 bits (2390), Expect = 0.0
Identities = 487/1048 (46%), Positives = 660/1048 (62%), Gaps = 38/1048 (3%)
Query: 7 KHQSWYLDSGCSRHMTGERRMFRELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 65
+ SW +DSGCSRHMTGE + F L G E + FG G+++ GTI V+ + +
Sbjct: 365 RSNSWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKD 424
Query: 66 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 125
V LV L +NLLS+SQL D+ +V F + R + + V F+ R ++
Sbjct: 425 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 483
Query: 126 AQNVKCLL-SVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDK 184
+CL+ S N + + WHRRLGH +S++S ++L+RGLP LK D +C C+ K
Sbjct: 484 PGPSRCLVASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKAPKDLVCAPCRHGK 543
Query: 185 FTKVPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 244
T K +V T +LLH++ GP + +S+GGK Y +V+VDD+SR++WV FL K+
Sbjct: 544 MTSSSHKPVTMVMTDGPGQLLHMNTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 603
Query: 245 ESHAVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNG 304
E+ F + + E + +RSD+G +F+N FES DS G+ H FS P PQQNG
Sbjct: 604 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 663
Query: 305 VVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 364
VVERKNRTL EMARTML E + FW EA++ AC+I NR+ +R IL+KTPYEL +P
Sbjct: 664 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 723
Query: 365 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVR 424
+S+ FGC C+VL + + L KF+++S + LGY+ S+ +R Y I E+ V
Sbjct: 724 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 782
Query: 425 FDDKL---------------------DSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDE 463
FD+ D D + D + V + G +P P D
Sbjct: 783 FDEASPGARPEISGVLDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 841
Query: 464 PE------EEAGPSNSQTLKKSRITAAHPKELIMGNKDEPVRTRSAFRPSEETLLSLKGL 517
P EE S I HP + ++G E V ++ L
Sbjct: 842 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYD------LVNSAF 895
Query: 518 VSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEK 577
V+ EPK++ AL D++W+ AM EEL F +N VWSLV+ P +VIGTKWVF+NKL E
Sbjct: 896 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 955
Query: 578 GDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFL 637
G +VRNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+L++F+ + L Q+DVKSAFL
Sbjct: 956 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1015
Query: 638 NGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKV 697
NG I EEVYV QPPGFE+ K P+HVFKL K+LYGLKQAPRAWYERL +FLL+N FE G V
Sbjct: 1016 NGVIEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1075
Query: 698 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQV 757
D TLF D L+VQIYVDDIIFG ++ +L +F ++M EFEMSMMGEL +FLG+Q+
Sbjct: 1076 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1135
Query: 758 DQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGS 817
QT EG ++HQ+KY+KELLKKF+M + TPM T L ++ +V Q+ YR IGS
Sbjct: 1136 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1195
Query: 818 LLYLTASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSG 877
LLYLTASRPDI FSV LCARF + PR +H AVKRI RY+K T G+ Y +S +
Sbjct: 1196 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRA 1255
Query: 878 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWM 937
+ DAD+AG + +RKSTSG C FLG++LVSW+S++QS++A STAEAEY++AA +Q+LWM
Sbjct: 1256 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWM 1315
Query: 938 KH*LEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFV 997
L+DY + S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V+KG ++L+FV
Sbjct: 1316 ISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFV 1375
Query: 998 DTDHQWADIFTKPLAEDRFNFILKNLNM 1025
+++ Q ADIFTKPL RF F+ L +
Sbjct: 1376 ESEKQLADIFTKPLDRSRFEFLRSELGV 1403
>emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa (japonica cultivar-group)]
gi|50923031|ref|XP_471876.1| OSJNBa0063G07.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1539
Score = 918 bits (2372), Expect = 0.0
Identities = 491/1044 (47%), Positives = 663/1044 (63%), Gaps = 64/1044 (6%)
Query: 11 WYLDSGCSRHMTGERRMFRELKLKPGG----EVGFGGNEKGKIVGTGTICVDSSPCIDNV 66
W LDSGC++HMTG+R MF ++ GG +V F N K K++G G I + + IDNV
Sbjct: 524 WVLDSGCTQHMTGDRAMFTTFEV--GGNEQEKVTFVDNSKRKVIGLGKIAISNDLSIDNV 581
Query: 67 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 126
V L NLLS++Q+ D G F + S +D S +F R N+Y + + EA
Sbjct: 582 SFVKSLNFNLLSVAQICDLGLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYFVDFNSSEA 641
Query: 127 QNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKFT 186
CL++ W+WHRRL H M ++S+LSK +LV GL ++KF D LC ACQ K
Sbjct: 642 NLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGKQV 701
Query: 187 KVPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDES 246
K+++STSR LELLH+DLFGP +SIGG + +VIVDDYSR+TWV FL K
Sbjct: 702 ACSHPTKSIMSTSRPLELLHMDLFGPTTYKSIGGNSHCLVIVDDYSRYTWVFFLHDKSIV 761
Query: 247 HAVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVV 306
+F + QNE +C +V++RSD+G +F+N E D GI H+ S +PQQNGVV
Sbjct: 762 AELFKKIAKRAQNEFSCTLVKIRSDNGSEFKNTNIEDYCDDLGIKHELSATYSPQQNGVV 821
Query: 307 ERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNI 366
ERKNRTL EMARTML E G++ FWAEA+NTAC+ NR + +L T YEL KPN+
Sbjct: 822 ERKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRFYLHRLLKNTSYELIVGRKPNV 881
Query: 367 SYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFD 426
+YF FGC CY+ RL KF+++ + LLGY+ SK +R YN + T+EE+ V+FD
Sbjct: 882 AYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGTVEETADVQFD 941
Query: 427 DKLDSDQS-KLVEKFADLSI-----NVSDKGKAPEEVEPE-----EDEPEEEAGPSNSQT 475
+ S + + ++ D + N+S P EVE + +DEP A PS +Q
Sbjct: 942 ETNGSQEGHENLDDVGDEGLIRAMKNMSFGDVKPIEVEDKPSTSTQDEPSTFATPSQAQV 1001
Query: 476 LKK--------------SRITAAHPKELIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLI 521
+ + ++ HP + ++G+ + V+T S ++ VS +
Sbjct: 1002 EVEEEKAQDPPIPPRIHTTLSKDHPIDQVLGDISKGVQTLSRV----ASICEHYSFVSCL 1057
Query: 522 EPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVV 581
EPK +DEAL D DW+ AM EELN F++N VW+LV++P +VIGTKWVFRNK +E G VV
Sbjct: 1058 EPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGLVV 1117
Query: 582 RNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYI 641
RNKARLVAQG++Q EG+D+ ETFAPVARLEAI +L++F+ +I L Q+DVKSAFLNG I
Sbjct: 1118 RNKARLVAQGFTQVEGLDFGETFAPVARLEAICILLAFASWFDIKLFQMDVKSAFLNGEI 1177
Query: 642 SEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKVDTTL 701
+E V+V QPPGFED K P+H FK+ GKVDTTL
Sbjct: 1178 AELVFVEQPPGFEDPKYPNHDFKI-----------------------------GKVDTTL 1208
Query: 702 FCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTP 761
F K DD + QIYVDDIIFGS N+ CKEF +MM EFEMSM+GEL +FLG+Q+ Q
Sbjct: 1209 FTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLK 1268
Query: 762 EGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYL 821
+GT++ Q+KY K+LLK+F + ++ KTPM L+ ++ V KLYR IGSLLYL
Sbjct: 1269 DGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYL 1328
Query: 822 TASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDA 881
TASRPDI+FSV +CA F + P+E HL AVKRILRYLK ++ +GL Y K +++KL GY D+
Sbjct: 1329 TASRPDIMFSVCMCAWFQAAPKECHLVAVKRILRYLKYSSTIGLWYPKGAKFKLVGYSDS 1388
Query: 882 DYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKH*L 941
DYAG + +R STSG+CQ LG +LVSW+SK+Q+++ALSTAEAEY+SA C Q+LWMK L
Sbjct: 1389 DYAGCKVDRNSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTL 1448
Query: 942 EDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDH 1001
DY I + P+ CDN +AI ++ NP+ HSR KHI++++HF+RD+V K +++ + T+
Sbjct: 1449 LDYGISFTKTPLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTED 1508
Query: 1002 QWADIFTKPLAEDRFNFILKNLNM 1025
Q ADIFTKPL E RF + LN+
Sbjct: 1509 QLADIFTKPLDETRFCKLRNELNV 1532
>gb|AAP53706.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37534234|ref|NP_921419.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1419
Score = 904 bits (2336), Expect = 0.0
Identities = 474/1021 (46%), Positives = 650/1021 (63%), Gaps = 35/1021 (3%)
Query: 7 KHQSWYLDSGCSRHMTGERRMFRELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 65
K W +DSG SRHMTG++ F LK E + F +V TG + V+ + N
Sbjct: 425 KENVWIVDSGDSRHMTGDKNWFSSLKKASKTESIVFADASTSAVVATGLVKVNEKFELKN 484
Query: 66 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 125
V LV L +NLLS+SQ+ D+ ++V F + + SVL N R ++K
Sbjct: 485 VALVKDLKYNLLSVSQIVDENFEVHFKKTGSKVFDSCGDSVL-NISRYERVFKADFENSV 543
Query: 126 AQNVKCLLS-VNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDK 184
+ + CL++ +++ WHRRLGH +++LS L+LVRGL LK D +C C+ K
Sbjct: 544 SLVITCLVAKFDKDVMFWHRRLGHVGFDHLTRLSGLDLVRGLSKLKKDLDLICTPCRHAK 603
Query: 185 FTKVPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 244
V T +LLH+D GP + +S+GGK Y +VIVDD+SR++WV F+T KD
Sbjct: 604 MVSTSHAPIVSVMTDAPGQLLHMDTVGPARVQSVGGKWYVLVIVDDFSRYSWVFFMTTKD 663
Query: 245 ESHAVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNG 304
E+ F +++ E + R+RSD+GG+F+N FE + G+ H+FS PR PQQN
Sbjct: 664 EAFQHFRGLFLRLELEFPGSLKRIRSDNGGEFKNASFEQFCNERGLEHEFSSPRVPQQNS 723
Query: 305 VVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 364
VVERKNR L EMARTML E + FWAEA+NTACYI NR+ +R L KT YEL +P
Sbjct: 724 VVERKNRVLVEMARTMLDEYKTTRKFWAEAINTACYISNRVFLRSKLGKTSYELRFGHQP 783
Query: 365 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVR 424
+S+ FGC C+VL + + L KF+A+S+ L LGY ++G+R I E+ V
Sbjct: 784 KVSHLRVFGCKCFVLKSGN-LDKFEARSTDGLFLGYPAHTRGYRVLILGTNKIVETCEVS 842
Query: 425 FDDKLDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAA 484
FD+ + + + + +G+ E E D +++ S + +S++T
Sbjct: 843 FDEASPGTRPDIAGTLSQV------QGEDGRIFEDESDYDDDDEVGSAGERTTRSKVTT- 895
Query: 485 HPKELIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELN 544
V SAF V+ EPK + AL D+ WI AM EEL
Sbjct: 896 -----------HDVCANSAF-------------VASFEPKDVSHALTDESWINAMHEELE 931
Query: 545 QFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETF 604
F +N VW+LV+ P +VIGTKWVF+NK NE G +VRNKARLVAQG++Q EG+D+ ETF
Sbjct: 932 NFERNKVWTLVEPPSGHNVIGTKWVFKNKQNEDGLIVRNKARLVAQGFTQVEGLDFDETF 991
Query: 605 APVARLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFK 664
APVAR+EAIRLL++F+ + L+Q+DVKSAFLNG+I EEVYV QPPGFE+ P+HVFK
Sbjct: 992 APVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFK 1051
Query: 665 LKKSLYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFCKTYKDDILIVQIYVDDIIFGS 724
L K+LYGLKQAPRAWY+RL +FLL F GKVD TLF + D+ L VQIYVDDIIFG
Sbjct: 1052 LSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDDIIFGC 1111
Query: 725 ANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLES 784
+ ++ +F E M+ EFEMSMMGEL YFLG+Q+ QTP+GT++HQ+KYTK+LL++F M
Sbjct: 1112 STHAVVVDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFKMENC 1171
Query: 785 TVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTASRPDILFSVHLCARF*SDPRE 844
TP+ T +L+ ++ V QK YR IGSLLYLTASRPDI F+V LCARF + PR
Sbjct: 1172 KPISTPIGSTAVLDPDEDGEAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRA 1231
Query: 845 THLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNL 904
+H AVKRI+RYL T G+ Y +S LSGY DAD+ G R +RKSTSG C FLG++L
Sbjct: 1232 SHRQAVKRIMRYLNHTLEFGIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSL 1291
Query: 905 VSWASKRQSTIALSTAEAEYISAAICSTQMLWMKH*LEDYQILESNIPIYCDNTAAISLS 964
++W+S++QS++A STAE+EY++AA C +Q+LW+ L+DY I +P++CDNT+AI+++
Sbjct: 1292 IAWSSRKQSSVAQSTAESEYVAAASCCSQILWLLSTLKDYGITFEKVPLFCDNTSAINIA 1351
Query: 965 KNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRFNFILKNLN 1024
KNP+ HSR KHI++++HF+RD+V+KG + L+F+DT Q ADIFTKPL +RF F+ L
Sbjct: 1352 KNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDSNRFAFLRGELG 1411
Query: 1025 M 1025
+
Sbjct: 1412 V 1412
>ref|XP_468929.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|28209450|gb|AAO37468.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1128
Score = 887 bits (2292), Expect = 0.0
Identities = 463/935 (49%), Positives = 625/935 (66%), Gaps = 31/935 (3%)
Query: 118 KIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALC 177
K+ + +NV L++ W+WHRRL H M ++S+LSK +LV GL ++KF D LC
Sbjct: 191 KVTFGDNSKRNVIGLVAKTSFGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLC 250
Query: 178 EACQKDKFTKVPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWV 237
ACQ K K+++STSR LELLH+DLFGP +SIGG + +VIVDDYS +TWV
Sbjct: 251 SACQASKQVACSHPTKSIMSTSRPLELLHMDLFGPTTYKSIGGNSHCLVIVDDYSCYTWV 310
Query: 238 KFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCP 297
FL K +F F + QNE +C +V++RSD+G KF+N E D I H+ S
Sbjct: 311 FFLHDKCIVAELFKKFAKRAQNEFSCTLVKIRSDNGSKFKNTNIEDYCDDLSIKHELSAT 370
Query: 298 RTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYE 357
+PQQNGVVERKNRTL EMARTML E G++ FWAEA+NTAC+ NR+ + +L KT YE
Sbjct: 371 YSPQQNGVVERKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRLLKKTSYE 430
Query: 358 LWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTI 417
L KPN++YF FGC CY+ RL KF+++ + LLGY+ SK +R YN + +
Sbjct: 431 LIVGRKPNVAYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGIV 490
Query: 418 EESIHVRFDDKLDSDQS-KLVEKFADLSI-----NVSDKGKAPEEVEPE-----EDEPEE 466
EE+ V+FD+ S + + ++ D + N+S P EVE + +DEP
Sbjct: 491 EETADVQFDETNGSQEGHENLDDVGDEGLMRAMKNMSIGDVKPIEVEDKPSTSTQDEPST 550
Query: 467 EAGPSNSQT-LKKSR-------------ITAAHPKELIMGNKDEPVRTRSAFRPSEETLL 512
A PS +Q ++K + ++ HP + ++G+ + V+TRS ++
Sbjct: 551 SASPSQAQVEVEKEKAQDPPMPPRIYTALSKDHPIDQVLGDISKGVQTRSPVA----SIC 606
Query: 513 SLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRN 572
VS +EPK +DEAL D DW+ A+ EELN F++N VW+LV++P +VIGTKWVFRN
Sbjct: 607 EHYSFVSCLEPKHVDEALYDPDWMNAIHEELNNFARNKVWTLVERPRDHNVIGTKWVFRN 666
Query: 573 KLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDV 632
K +E VVRNKARLVAQG++Q E +D+ ETF PVARLEAIR+L++F+ +I L Q+DV
Sbjct: 667 KQDENRLVVRNKARLVAQGFTQVEDLDFGETFGPVARLEAIRILLAFASCFDIKLFQMDV 726
Query: 633 KSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEF 692
KSAFLNG I+E V+V QPPGF+D K P+HV+KL K+LYGLKQAPRAWYERL FLL +F
Sbjct: 727 KSAFLNGEIAELVFVEQPPGFDDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDF 786
Query: 693 ERGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYF 752
+ GKVDTTLF K DD + QIYVDDIIFGS N+ CKEF +MM EFEMSM+ EL +F
Sbjct: 787 KIGKVDTTLFTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIEELSFF 846
Query: 753 LGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYR 812
LG+Q+ Q +GT++ Q+KY K+LLK+F + ++ KTPM L+ ++ V KLYR
Sbjct: 847 LGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNWHLDLDEGGKPVDLKLYR 906
Query: 813 GTIGSLLYLTASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSE 872
IGSLLYLTASRPDI+FSV + ARF + P+E HL AVKRILRYLK ++ + L Y K ++
Sbjct: 907 SMIGSLLYLTASRPDIMFSVCMYARFQAAPKECHLVAVKRILRYLKHSSTISLWYPKGAK 966
Query: 873 YKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICST 932
+KL GY D+DYAG + +RKSTSG+CQ LG +LVSW+SK+Q+++ALSTAEAEYISA C
Sbjct: 967 FKLVGYSDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYISAGSCCA 1026
Query: 933 QMLWMKH*LEDYQI--LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKG 990
Q+LWMK L DY I E+ P+ C+N + I ++ NP+ H R KHI++++HF+ D+V K
Sbjct: 1027 QLLWMKQILLDYGISFTETQTPLLCNNDSTIKIANNPVQHFRTKHIDIRHHFLTDHVAKC 1086
Query: 991 VLLLKFVDTDHQWADIFTKPLAEDRFNFILKNLNM 1025
+++ + T+ Q ADIFTKPL E RF + LN+
Sbjct: 1087 DIVISHIRTEDQLADIFTKPLDETRFCKLRNELNV 1121
Score = 38.9 bits (89), Expect = 0.90
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 11 WYLDSGCSRHMTGERRMFR--ELKLKPGGEVGFGGNEKGKIVG 51
W LDS C++ MTG+R MF E++ K +V FG N K ++G
Sbjct: 162 WVLDSVCTQRMTGDRAMFTTFEVEGKEQEKVTFGDNSKRNVIG 204
>ref|NP_912905.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 940
Score = 853 bits (2203), Expect = 0.0
Identities = 458/905 (50%), Positives = 600/905 (65%), Gaps = 39/905 (4%)
Query: 155 SQLSKLNLVRGLPNLKFASDALCEACQKDKFTKVPFKAKNVVSTSRSLELLHIDLFGPVK 214
SQ SK + GL N++F D +C ACQ K KNV++T+R LELLH+DLFGP+
Sbjct: 34 SQTSKARHILGLTNIQFEKDRVCSACQAGKQIGAHHPVKNVMTTTRPLELLHMDLFGPIA 93
Query: 215 TESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGG 274
SIGG +YG+VIVDD+S +TWV FL K E+ A+F F + QNE +I +RSD+
Sbjct: 94 YLSIGGNKYGLVIVDDFSCFTWVFFLHDKSETQAIFKKFARRAQNEFDLKIKNIRSDNVK 153
Query: 275 KFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEA 334
+F+N ES D GI H+FS P +PQQNGV ERKNRTL E+ARTML E + FWAEA
Sbjct: 154 EFKNTCIESFLDEEGIKHEFSAPYSPQQNGVAERKNRTLIEIARTMLDEYKTSDRFWAEA 213
Query: 335 VNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSK 394
VNT C+ NR+ + +L KTPYEL KPN+SYF FG CY+LN K R KF K
Sbjct: 214 VNTVCHDINRLYLHRLLKKTPYELLTGNKPNVSYFRVFGSKCYILNKKARSSKFAPKVDG 273
Query: 395 CLLLGYSERSKGFRFYNTDAKTIEESIHVRFDD-------KLDS-------DQSKLVEKF 440
LLGY +R +N + +E + V FD+ ++DS D + +++
Sbjct: 274 GFLLGYGSNECAYRVFNKTSGIVEIAPDVTFDETNGSQVEQVDSHVLGEEEDPREAIKRL 333
Query: 441 A--DLSINVSDKGKAPE-EVEPEE------------DEPEE-EAGPSNSQTLKKSRITAA 484
A D+ +G + +VEP D+ EE E P +S L RI +
Sbjct: 334 ALGDVRPREPQQGASSSTQVEPPTSTQANDPSTSSLDQGEEGEQVPPSSINLAHPRIHQS 393
Query: 485 ----HPKELIMGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAME 540
HP + I+G+ ++ V TRS E VS +EP ++EAL D DW++AM+
Sbjct: 394 IQRDHPTDNILGDINKGVSTRSHIANFCEHY----SFVSSLEPLRVEEALNDPDWVMAMQ 449
Query: 541 EELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDY 600
EELN F++N+VW+LV++ +VIGTKW+FRNK +E G V+RNKARLVAQG++Q EG+D+
Sbjct: 450 EELNNFTRNEVWTLVERSRQ-NVIGTKWIFRNKQDEAGVVIRNKARLVAQGFTQIEGLDF 508
Query: 601 TETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPD 660
ETFAPVARLE+IR+L++F+ N N L+Q+DVKSAFLNG I+E VYV QPPGF+D K P+
Sbjct: 509 GETFAPVARLESIRILLTFATNLNFKLYQMDVKSAFLNGLINELVYVEQPPGFKDPKYPN 568
Query: 661 HVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKVDTTLFCKTYKDDILIVQIYVDDI 720
HV+KL K+LY LKQAPRAWYE L +FL++N FE GK D+TLF K + +DI + QIYVDDI
Sbjct: 569 HVYKLHKALYELKQAPRAWYECLRNFLVKNGFEIGKADSTLFTKRHDNDIFVCQIYVDDI 628
Query: 721 IFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFN 780
IFGS N+S +EF MM FEMSMMGELK+FLG+Q+ Q EGT+I Q+KY K++LKKF
Sbjct: 629 IFGSTNKSFSEEFSRMMTKRFEMSMMGELKFFLGLQIKQLKEGTFICQTKYLKDMLKKFG 688
Query: 781 MLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLLYLTASRPDILFSVHLCARF*S 840
M + TPM L+ ++ V QK+YR IGSLLYL ASRPDI+ SV +CARF +
Sbjct: 689 MENAKPIHTPMPSNGHLDLNEQGKDVDQKVYRSIIGSLLYLCASRPDIMLSVCMCARFQA 748
Query: 841 DPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFL 900
P+E HL AVKRILRYL T NLGL Y K + + L GY DADYAG + +RKSTSG CQFL
Sbjct: 749 APKECHLVAVKRILRYLVHTPNLGLWYPKGARFDLIGYADADYAGCKVDRKSTSGTCQFL 808
Query: 901 GSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKH*LEDYQILESNIPIYCDNTAA 960
G +LVSW+SK+Q+++ALSTAEAEYIS C Q++WMK L DY + S IP+ CDN +A
Sbjct: 809 GRSLVSWSSKKQNSVALSTAEAEYISTGSCCAQLIWMKQTLRDYGLNVSKIPLLCDNESA 868
Query: 961 ISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRFNFIL 1020
I ++ NP+ HSR KHI++++HF+RD+ +G + ++ V D Q ADIFTKPL E RF +
Sbjct: 869 IKIANNPVQHSRTKHIDIRHHFLRDHSTRGDIDIQHVRIDKQLADIFTKPLDEARFCELR 928
Query: 1021 KNLNM 1025
LN+
Sbjct: 929 SELNI 933
>ref|XP_463224.1| putative integrase [Oryza sativa (japonica cultivar-group)]
gi|40737034|gb|AAR89047.1| putative integrase [Oryza
sativa (japonica cultivar-group)]
Length = 1507
Score = 811 bits (2094), Expect = 0.0
Identities = 445/1046 (42%), Positives = 625/1046 (59%), Gaps = 91/1046 (8%)
Query: 7 KHQSWYLDSGCSRHMTGERRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNV 66
K W +DSGC RHMTG ++ + +LK NV
Sbjct: 519 KENVWIVDSGCLRHMTGMVKVNEKFELK------------------------------NV 548
Query: 67 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 126
LV+ L +NLLS+ Q+ + ++V F + + SVL N R ++K +
Sbjct: 549 ALVEDLNYNLLSVLQIVYENFEVHFKKTRSKVFDSCGDSVL-NISRYGRVFKADFENPVS 607
Query: 127 QNVKCLLS-VNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKDKF 185
+ CL++ +++ WHRRLGH +++LS L+LVRGLP LK D C C K
Sbjct: 608 PVITCLVAKFDKDVMFWHRRLGHVGFDHLTRLSGLDLVRGLPKLKKDLDLDCAPCHHAKM 667
Query: 186 TKVPFKAKNVVSTSRSLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDE 245
V T +LLH+D GP + +S+GGK Y +VI+DD+SR++WV F+ KDE
Sbjct: 668 VASSHAPIVSVMTDAPRQLLHMDTVGPARVQSVGGKWYVLVIIDDFSRYSWVFFMATKDE 727
Query: 246 SHAVFSTFIAQVQNEKACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGV 305
+ F +++ E + R+RSD+G +++N FE + G+ H+FS PR PQQNGV
Sbjct: 728 AFQHFRGLFLRLELEFPGSLKRIRSDNGSEYKNASFEQFCNERGLEHEFSSPRVPQQNGV 787
Query: 306 VERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPN 365
VERKN L EM RTML E + FWAEA+NTA YI NR+ +R L K+ YEL +P
Sbjct: 788 VERKNHVLVEMVRTMLDEYKTPRKFWAEAINTAYYISNRVFLRSKLGKSSYELRFGHQPK 847
Query: 366 ISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNT----DAKTIEESI 421
+S+ FGC C+VL + + L KF+A+S+ L LGY ++G+R + D + E+
Sbjct: 848 VSHLRVFGCKCFVLKSGN-LDKFEARSTDGLFLGYPAHTRGYRTLSQVQGEDGRIFEDES 906
Query: 422 HVRFDDKLDS----------------------DQSKLVEKFADLSINVSDKGKAPEEVEP 459
DD++ S ++S A+ S++ G P E+
Sbjct: 907 DDNDDDEVGSAGQTGRQAGQTAGTPPVRPAHEERSDRPGLSAEGSVDAVRDG--PLEITT 964
Query: 460 EEDEPEEEAGPSNSQTLKKSRITAAHPKELIMGNKDEPVRTRSAFRPSEETLLSLKGLVS 519
E S S+ + I HP E I+GN E TRS + + + + V+
Sbjct: 965 STSTDTEHG--STSEVVAPLHIQQRHPPEQIIGNIGERT-TRS--KVTTHDVCANYAFVA 1019
Query: 520 LIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGD 579
EPK + AL D+ WI AM EEL F +N VW+LV+ P ++IGTKWVF+NK NE
Sbjct: 1020 SFEPKDVSHALTDESWINAMHEELENFERNKVWTLVEPPSGHNIIGTKWVFKNKQNEDDL 1079
Query: 580 VVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQIDVKSAFLNG 639
+VRNKARLVAQG++Q EG+D+ ETFAPVAR+EAIRL ++F+ + L+Q+DVKSAFLNG
Sbjct: 1080 IVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLFLAFASSKGFKLYQMDVKSAFLNG 1139
Query: 640 YISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFERGKVDT 699
+I EEVYV QPPGFE+ P++VFKL K+LYGLKQAPRAWY+RL +FLL F GKVD
Sbjct: 1140 FIQEEVYVKQPPGFENPDFPNYVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDK 1199
Query: 700 TLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEFEMSMMGELKYFLGIQVDQ 759
TLF L +F E M+ EFEMSMMGEL YFLG+Q+ Q
Sbjct: 1200 TLFV-------------------------LKHDFAETMRREFEMSMMGELSYFLGLQIKQ 1234
Query: 760 TPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGTIGSLL 819
TP+GT++HQ+KYTK+LL++F M TP+ T +L+ ++ V QK YR IGSLL
Sbjct: 1235 TPQGTFVHQTKYTKDLLRRFKMENCKPISTPIDSTAVLDPDEDGEAVDQKEYRSMIGSLL 1294
Query: 820 YLTASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYC 879
YLTASRP+I F+V LCARF + PR +H AVKRI+RYL T G+ Y +S LSGY
Sbjct: 1295 YLTASRPEIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEFGIWYSTSSSLCLSGYS 1354
Query: 880 DADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKH 939
DA++ G R +RKSTSG C FLG++L++W+S++QS++A STAE+EY++AA C +Q+LW+
Sbjct: 1355 DANFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYVAAASCCSQILWLLS 1414
Query: 940 *LEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDT 999
L++Y + +P++CDNT+AI+++KN + HSR KH+++++HF+RD+V+KG + L+F+DT
Sbjct: 1415 TLKNYGLTFEKVPLFCDNTSAINIAKNLVQHSRTKHVDIRFHFLRDHVEKGDVELQFLDT 1474
Query: 1000 DHQWADIFTKPLAEDRFNFILKNLNM 1025
Q ADIFTKPL + F F+ L +
Sbjct: 1475 KLQIADIFTKPLDSNCFTFLCGELGI 1500
>gb|AAP94592.1| retrotransposon Opie-2 [Zea mays]
Length = 1512
Score = 771 bits (1992), Expect = 0.0
Identities = 406/824 (49%), Positives = 538/824 (65%), Gaps = 56/824 (6%)
Query: 202 LELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEK 261
LELLH+DLFGPV SIGG +YG+VIVDD+SR+TWV FL K E+ F+ + QNE
Sbjct: 738 LELLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQGTLKRFLRRAQNEF 797
Query: 262 ACRIVRVRSDHGGKFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTML 321
++ ++RSD+G +F+N + E + GI H+FS P TPQQNGVVERKNRTL +MARTML
Sbjct: 798 ELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVERKNRTLIDMARTML 857
Query: 322 QETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNT 381
E + FW+EAVNTAC+ NR+ + +L KT YEL KPN+SYF FG CY+L
Sbjct: 858 GEFKTPECFWSEAVNTACHAINRVYLHRLLKKTSYELLTGNKPNVSYFRVFGSKCYILVK 917
Query: 382 KDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFA 441
K R KF K+ + LLGY +K +R +N + +E S V FD+ S + ++V+
Sbjct: 918 KGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDETNGSPREQVVDC-- 975
Query: 442 DLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELIMGNKDEPVRTR 501
D+ +EE P+ + ++ I P+E +D+P +
Sbjct: 976 --------------------DDVDEEDVPTAA--IRTMAIGEVRPQE--QDERDQPSSST 1011
Query: 502 SAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESV 561
+ P+++ +P ++EAL D DW+LAM+EELN F +N+VWSL
Sbjct: 1012 TVHPPTQDDE----------QPFRVEEALLDLDWVLAMQEELNNFKRNEVWSL------- 1054
Query: 562 HVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSV 621
+E G V RNKARLVA+GY+Q G+D+ ETFAPVARLE+IR+L++++
Sbjct: 1055 -------------DEHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAA 1101
Query: 622 NHNIVLHQIDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYE 681
+H+ L+Q+DVKSAFLNG I EEVYV QPPGFEDE+ PDHV KL K+LYGLKQAPRAWYE
Sbjct: 1102 HHSFRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLAKALYGLKQAPRAWYE 1161
Query: 682 RLSSFLLENEFERGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFYEMMQAEF 741
L FL+ N F+ GK D TLF KT D+ + QI+VDDIIFGS NQ C+EF +M +F
Sbjct: 1162 CLRDFLIANAFKVGKADPTLFTKTCNGDLFVCQIFVDDIIFGSTNQKSCEEFSRVMTQKF 1221
Query: 742 EMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKED 801
EMSMMG+L YFLG QV Q +GT+I Q KYT++LLK+F M ++ AKTPM +
Sbjct: 1222 EMSMMGKLNYFLGFQVKQLKDGTFISQMKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNK 1281
Query: 802 KSGKVCQKLYRGTIGSLLYLTASRPDILFSVHLCARF*SDPRETHLTAVKRILRYLKGTT 861
V QK YR IGSLLYL ASRPDI+ SV +CARF S+P+E HL AVKRILRYL T
Sbjct: 1282 GGKSVDQKAYRSMIGSLLYLCASRPDIMLSVCMCARFQSEPKECHLVAVKRILRYLVATP 1341
Query: 862 NLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAE 921
GL Y K S + L GY D+D AG + +RKSTSG CQFLG +LVSW SK+Q+++ALSTAE
Sbjct: 1342 CFGLWYPKGSTFDLVGYSDSDNAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAE 1401
Query: 922 AEYISAAICSTQMLWMKH*LEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYH 981
AEY++A C Q+LWM+ L D+ S +P+ CDN +AI +++NP+ H+R KHI++++H
Sbjct: 1402 AEYVAAGQCCAQLLWMRQTLRDFGYNLSKVPLLCDNESAIRMAENPVEHNRTKHIDIRHH 1461
Query: 982 FIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRFNFILKNLNM 1025
F+RD+ QKG + + V T++Q ADIFTKPL E F + LN+
Sbjct: 1462 FLRDHQQKGDIEVFHVSTENQLADIFTKPLDEKTFCRLRSELNV 1505
Score = 44.3 bits (103), Expect = 0.021
Identities = 22/49 (44%), Positives = 31/49 (62%), Gaps = 2/49 (4%)
Query: 10 SWYLDSGCSRHMTGERRMFRE-LKLKPGGE-VGFGGNEKGKIVGTGTIC 56
SW +DSGC+ HMTGE++MF +K K + + FG +GK+ TIC
Sbjct: 671 SWIIDSGCTNHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGKLSLLATIC 719
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,742,850,088
Number of Sequences: 2540612
Number of extensions: 74177483
Number of successful extensions: 209020
Number of sequences better than 10.0: 3922
Number of HSP's better than 10.0 without gapping: 2389
Number of HSP's successfully gapped in prelim test: 1535
Number of HSP's that attempted gapping in prelim test: 200096
Number of HSP's gapped (non-prelim): 6262
length of query: 1032
length of database: 863,360,394
effective HSP length: 138
effective length of query: 894
effective length of database: 512,755,938
effective search space: 458403808572
effective search space used: 458403808572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)
Lotus: description of TM0177.6