BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0176a.15
(629 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa... 498 e-139
ref|NP_199332.2| cyclin family protein [Arabidopsis thaliana] 498 e-139
dbj|BAB11392.1| unnamed protein product [Arabidopsis thaliana] 492 e-137
dbj|BAC42172.1| unknown protein [Arabidopsis thaliana] gi|306848... 464 e-129
emb|CAB78962.1| putative protein [Arabidopsis thaliana] gi|45824... 403 e-111
gb|AAX92938.1| Cyclin, N-terminal domain, putative [Oryza sativa... 325 3e-87
dbj|BAD94242.1| putative protein [Arabidopsis thaliana] gi|62320... 312 2e-83
ref|XP_465361.1| cyclin K-like [Oryza sativa (japonica cultivar-... 276 2e-72
ref|XP_464024.1| cyclin T2-like protein [Oryza sativa (japonica ... 268 5e-70
emb|CAB78958.1| putative protein [Arabidopsis thaliana] gi|28530... 241 4e-62
gb|AAK06874.1| putative cyclin [Arabidopsis thaliana] gi|2645046... 236 1e-60
gb|AAM67327.1| putative cyclin [Arabidopsis thaliana] 236 1e-60
gb|AAR01224.1| cyclin T1 [Medicago truncatula] 227 1e-57
ref|NP_174775.1| cyclin family protein [Arabidopsis thaliana] gi... 224 9e-57
ref|XP_637571.1| hypothetical protein DDB0187046 [Dictyostelium ... 203 2e-50
gb|AAH44435.1| Wu:fi75b02 protein [Danio rerio] 167 7e-40
gb|AAH57477.1| Wu:fi75b02 protein [Danio rerio] 166 2e-39
ref|NP_001232.1| cyclin T2 isoform a [Homo sapiens] gi|2981198|g... 164 8e-39
gb|AAY14998.1| unknown [Homo sapiens] gi|17978469|ref|NP_490595.... 164 8e-39
gb|AAC39666.1| cyclin T2b [Homo sapiens] 164 8e-39
>gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa (japonica
cultivar-group)]
Length = 490
Score = 498 bits (1282), Expect = e-139
Identities = 293/559 (52%), Positives = 355/559 (63%), Gaps = 96/559 (17%)
Query: 1 MAGLLLGDTSHDGTHQSGSQGCSQEN-------GSRWYLSRKEIEENSPSKQDGVDLKKE 53
M G+ D+SH G ++ + G+ WY SRKEIEENS S++DG+DLKKE
Sbjct: 1 MDGIQTSDSSHHGIVENSPYRTPYDRYAEGGQLGASWYFSRKEIEENSLSRRDGIDLKKE 60
Query: 54 AYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHRFFLRQSHAKNDRRIIATSCMFLAGKV 113
+YLRKSYCT+LQDLGMRLKVPQVTIA+AI+FCHRFFLRQSHAKNDRR IAT CMFLAGKV
Sbjct: 61 SYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKV 120
Query: 114 EETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDFHVQ 173
EETPRPLKDVIL+SYEIIHKKD AAVQRIKQKEVYEQQKELILLGERVVL TLGFD +V
Sbjct: 121 EETPRPLKDVILISYEIIHKKDAAAVQRIKQKEVYEQQKELILLGERVVLVTLGFDLNVH 180
Query: 174 HPYKPLVEAIKKLKVSQNALAQVAWNFVNDGLRTSLCLQFKPQHIAAGAIFLAAKFLNVK 233
HPYKPLVEAIKK KV+QNALAQVAWNFVNDGLRTSLCLQFKP HIAAGAIFLAAKFL VK
Sbjct: 181 HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVK 240
Query: 234 L----EKLWWQVFDVTLTAHQLEEVSNQMLELYEQNQIAP----SNDVEGTAGG--GNRA 283
L EK+WWQ FDV T QLEEVSNQMLELYEQN++AP ND EG++ RA
Sbjct: 241 LPSDGEKVWWQEFDV--TPRQLEEVSNQMLELYEQNRVAPPPSQGNDTEGSSASVVNQRA 298
Query: 284 TPKASTSNDEAATTNNNLYIRGPSPRLEASKLAISKNVVSSANHVGPVSNHGTNGSTEMI 343
+ KA S++E T N+L +PR S+ H G
Sbjct: 299 SGKAPGSSEEPPTHENHL-----APRQS-----------STPGHQG-------------- 328
Query: 344 HLVEGDAKGNQHPEQEPPPHKENLQEAQDTVRSRSGYSEEPEINIGRSNMKEDVELNDKH 403
+ HPE++ + +A+D G +N E ++
Sbjct: 329 -------YDHPHPEKQNSSQRVPQNDARD----------------GTANSNEGPNMSS-- 363
Query: 404 SSKNLNHRDGTFAPPSLEAIKKIDRDKVKAALEKRKKAVGNITKKTELMDDEDLFERVRE 463
+++A+KKID+DKVKAALEKR+K+ G++ KK ++MDD+DL E RE
Sbjct: 364 ---------------TMDAMKKIDKDKVKAALEKRRKSKGDVAKKVDIMDDDDLIE--RE 406
Query: 464 LEDGIELAAQSEKNKQDDEDLIERVRELEDGIELAAQSEKNKQ-----DGQKSLSKPVDR 518
LE G+ELAA+ EK K + ED +A +E ++ D Q+ S +D
Sbjct: 407 LEHGVELAAEDEKIKHERRQSWPHSAHREDHQGVARLTENTEEGELSIDSQEYRSPELDN 466
Query: 519 SAFENMQQGKHQDHSEEHL 537
++M + ++ D E L
Sbjct: 467 RKRKDMHEHRNYDRGERDL 485
>ref|NP_199332.2| cyclin family protein [Arabidopsis thaliana]
Length = 579
Score = 498 bits (1281), Expect = e-139
Identities = 314/645 (48%), Positives = 390/645 (59%), Gaps = 85/645 (13%)
Query: 1 MAGLLLGDTSHDGTHQSGSQGCS---QENGSRWYLSRKEIEENSPSKQDGVDLKKEAYLR 57
MAG+L G+ S+ + S S QE SRWY RKEIEENSPS+ DG+DLKKE YLR
Sbjct: 1 MAGVLAGECSYSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLR 60
Query: 58 KSYCTYLQDLGMRLKVPQVTIASAIIFCHRFFLRQSHAKNDRRIIATSCMFLAGKVEETP 117
KSYCT+LQDLGMRLKVPQVTIA+AIIFCHRFF RQSHAKNDRR IAT CMFLAGKVEETP
Sbjct: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETP 120
Query: 118 RPLKDVILVSYEIIHKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDFHVQHPYK 177
RPLKDVI VSYEII+KKDP A Q+IKQKEVYEQQKELIL GE++VL+TLGFD +V HPYK
Sbjct: 121 RPLKDVIFVSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYK 180
Query: 178 PLVEAIKKLKVSQNALAQVAWNFVNDGLRTSLCLQFKPQHIAAGAIFLAAKFLNVKL--- 234
PLVEAIKK KV+QNALAQVAWNFVNDGLRTSLCLQFKP HIAAGAIFLAAKFL VKL
Sbjct: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
Query: 235 -EKLWWQVFDVTLTAHQLEEVSNQMLELYEQNQIAPS--NDVEGTAGGGNRATP--KAST 289
EK+WWQ FDVT QLE+VSNQMLELYEQN++ S ++VE + GGG+ P + +
Sbjct: 241 GEKVWWQEFDVT--PRQLEDVSNQMLELYEQNRVPASQGSEVESSVGGGSAQRPGSRNAV 298
Query: 290 SNDEAATTNNNLYIRGPSPRLEASKLA-ISKNVVSSANHVGPVSNHGTNGSTEMIHLVEG 348
S DE + +R + + SK V++ N G N S + +E
Sbjct: 299 STDEHVGSRQTSSVRSTHEQSNSDNHGGSSKGVLNQNNENG--GGEAANVSVDNKEEIER 356
Query: 349 DAKGNQHPEQEPPPHKENLQEAQDTVRSRSGYSEEPEINIGRSNM-KEDVELNDK---HS 404
+ K + + P HK+N++EA R E P G+ N +E EL D H
Sbjct: 357 ETKESSLHLESHPAHKDNVREAPHNSRP---LVEGP----GKDNSEREGGELQDDGAVHK 409
Query: 405 SKNLNHRDGTFAPPSLEAIKKIDRDKVKAALEKRKKAVGNITKKTELMDDEDLFERVREL 464
S+N++ D + + K+ RDKVKA EK KK +G T+K +LMD++DL E
Sbjct: 410 SRNVDVGDALISQSPKDL--KLLRDKVKAKREKAKKLLGERTRKKDLMDEDDLIE----- 462
Query: 465 EDGIELAAQSEKNKQDDEDLIERVRELEDGIELAAQSEKNKQDGQKSLSKP-VDRSAFEN 523
RELED ++LA + EK K+ +K S+P + S
Sbjct: 463 ------------------------RELED-VQLAVEDEKTKE--RKVQSRPKAENSDLMG 495
Query: 524 MQQGKHQDHSEEHLHLVKPSHETDLSAVEEGEVSALDDIDLGRKSSNHKRKAESSPDKFA 583
+ G+ D E + EEGE+ + ++ + KRK S P+K +
Sbjct: 496 TEHGEILDVKGE------------VKNTEEGEMV---NNNVSPMMHSRKRKMGSPPEKQS 540
Query: 584 EGKKRHNYSFGSTHHNRIDYIEDQNNVNLLGHAERDSKRPVQENH 628
EGK+RHN G H + + H +R+ +R QEN+
Sbjct: 541 EGKRRHNSENGEESH--------KTSRGSSHHGDREHRRHSQENN 577
>dbj|BAB11392.1| unnamed protein product [Arabidopsis thaliana]
Length = 583
Score = 492 bits (1266), Expect = e-137
Identities = 314/649 (48%), Positives = 390/649 (59%), Gaps = 89/649 (13%)
Query: 1 MAGLLLGDTSHDGTHQSGSQGCS---QENGSRWYLSRKEIEENSPSKQDGVDLKKEAYLR 57
MAG+L G+ S+ + S S QE SRWY RKEIEENSPS+ DG+DLKKE YLR
Sbjct: 1 MAGVLAGECSYSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLR 60
Query: 58 KSYCTYLQDLGMRLKV----PQVTIASAIIFCHRFFLRQSHAKNDRRIIATSCMFLAGKV 113
KSYCT+LQDLGMRLKV PQVTIA+AIIFCHRFF RQSHAKNDRR IAT CMFLAGKV
Sbjct: 61 KSYCTFLQDLGMRLKVFPISPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKV 120
Query: 114 EETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDFHVQ 173
EETPRPLKDVI VSYEII+KKDP A Q+IKQKEVYEQQKELIL GE++VL+TLGFD +V
Sbjct: 121 EETPRPLKDVIFVSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVY 180
Query: 174 HPYKPLVEAIKKLKVSQNALAQVAWNFVNDGLRTSLCLQFKPQHIAAGAIFLAAKFLNVK 233
HPYKPLVEAIKK KV+QNALAQVAWNFVNDGLRTSLCLQFKP HIAAGAIFLAAKFL VK
Sbjct: 181 HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVK 240
Query: 234 L----EKLWWQVFDVTLTAHQLEEVSNQMLELYEQNQIAPS--NDVEGTAGGGNRATP-- 285
L EK+WWQ FDVT QLE+VSNQMLELYEQN++ S ++VE + GGG+ P
Sbjct: 241 LPSDGEKVWWQEFDVT--PRQLEDVSNQMLELYEQNRVPASQGSEVESSVGGGSAQRPGS 298
Query: 286 KASTSNDEAATTNNNLYIRGPSPRLEASKLA-ISKNVVSSANHVGPVSNHGTNGSTEMIH 344
+ + S DE + +R + + SK V++ N G N S +
Sbjct: 299 RNAVSTDEHVGSRQTSSVRSTHEQSNSDNHGGSSKGVLNQNNENG--GGEAANVSVDNKE 356
Query: 345 LVEGDAKGNQHPEQEPPPHKENLQEAQDTVRSRSGYSEEPEINIGRSNM-KEDVELNDK- 402
+E + K + + P HK+N++EA R E P G+ N +E EL D
Sbjct: 357 EIERETKESSLHLESHPAHKDNVREAPHNSRP---LVEGP----GKDNSEREGGELQDDG 409
Query: 403 --HSSKNLNHRDGTFAPPSLEAIKKIDRDKVKAALEKRKKAVGNITKKTELMDDEDLFER 460
H S+N++ D + + K+ RDKVKA EK KK +G T+K +LMD++DL E
Sbjct: 410 AVHKSRNVDVGDALISQSPKDL--KLLRDKVKAKREKAKKLLGERTRKKDLMDEDDLIE- 466
Query: 461 VRELEDGIELAAQSEKNKQDDEDLIERVRELEDGIELAAQSEKNKQDGQKSLSKP-VDRS 519
RELED ++LA + EK K+ +K S+P + S
Sbjct: 467 ----------------------------RELED-VQLAVEDEKTKE--RKVQSRPKAENS 495
Query: 520 AFENMQQGKHQDHSEEHLHLVKPSHETDLSAVEEGEVSALDDIDLGRKSSNHKRKAESSP 579
+ G+ D E + EEGE+ + ++ + KRK S P
Sbjct: 496 DLMGTEHGEILDVKGE------------VKNTEEGEMV---NNNVSPMMHSRKRKMGSPP 540
Query: 580 DKFAEGKKRHNYSFGSTHHNRIDYIEDQNNVNLLGHAERDSKRPVQENH 628
+K +EGK+RHN G H + + H +R+ +R QEN+
Sbjct: 541 EKQSEGKRRHNSENGEESH--------KTSRGSSHHGDREHRRHSQENN 581
>dbj|BAC42172.1| unknown protein [Arabidopsis thaliana] gi|30684822|ref|NP_193695.2|
cyclin family protein [Arabidopsis thaliana]
Length = 541
Score = 464 bits (1194), Expect = e-129
Identities = 286/551 (51%), Positives = 352/551 (62%), Gaps = 51/551 (9%)
Query: 1 MAGLLLGDTSHDGTHQSGSQGCS---QENGSRWYLSRKEIEENSPSKQDGVDLKKEAYLR 57
MAG+L GD S + S S Q+ +RWY RKEIEENSPS+ D +DLKKE YLR
Sbjct: 1 MAGVLAGDCSFGESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLR 60
Query: 58 KSYCTYLQDLGMRLKVPQVTIASAIIFCHRFFLRQSHAKNDRRIIATSCMFLAGKVEETP 117
KSYCT+LQDLGMRLKVPQVTIA+AIIFCHRFF+RQSHA+NDRR IAT CMFLAGKVEETP
Sbjct: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETP 120
Query: 118 RPLKDVILVSYEIIHKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDFHVQHPYK 177
RPLKDVI+VSYEIIHKKDP Q+IKQKEVYEQQKELIL GE++VL+TLGFDF+V HPYK
Sbjct: 121 RPLKDVIVVSYEIIHKKDPTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYK 180
Query: 178 PLVEAIKKLKVSQNALAQVAWNFVNDGLRTSLCLQFKPQHIAAGAIFLAAKFLNVKL--- 234
PLVEAIKK KV+QNALAQVAWNFVNDGLRTSLCLQFKP HIAAGAIFLAAKFL VKL
Sbjct: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
Query: 235 -EKLWWQVFDVTLTAHQLEEVSNQMLELYEQNQIAPS--NDVEGTAGGGNRATPKASTSN 291
EK+WWQ FDV T QLE+VSNQMLELYEQN++ S ++VE + GGG+ +
Sbjct: 241 GEKVWWQEFDV--TPRQLEDVSNQMLELYEQNRVPASQVSEVESSVGGGSAHHVGSR--- 295
Query: 292 DEAATTNNNLYIRGPSPRLEASKLAISKNVVSSANHVGPVSNHGTNGSTEMIHLVEGDAK 351
PS RL + + S N+ S SN NGS E ++ + K
Sbjct: 296 --------------PSARL-THEHSNSDNLGGSTKATQNRSN--DNGSGEAGSVIT-EQK 337
Query: 352 GNQHPEQEPPPHKENLQEAQDTVRSRSGYSEEPEINIGRSNMKEDVELNDKHSSKNLNHR 411
G + E + H E+ +SRSG E I K + S+ +
Sbjct: 338 GERDTETKDSMH----TESHPAHKSRSGVEAPGEDKI----EKAGAHFPEDDKSRIVGTA 389
Query: 412 DGTFAPPSLEAIKKIDRDKVKAALEKRKKAVGNITKKTELMDDEDLFERVRELEDGIELA 471
D T + + K+ RDKVKA LE KK G T+K +L+D++DL E RELED +ELA
Sbjct: 390 DVTVSQSPKDI--KMFRDKVKAKLE-AKKVQGEKTRKKDLVDEDDLIE--RELED-VELA 443
Query: 472 AQSEKNKQDDEDLIERVRELEDGIELAAQSEKNKQDGQKSLSKPVDRSAFEN-----MQQ 526
+ +K+ Q+ + E+ DG L +E+ + S + P + E+ + +
Sbjct: 444 VEDDKDIQNKSSMGTEHGEILDGNNLVVNTEEGEMIDDVSSTMPSRKRKMESPCEKQLGE 503
Query: 527 GKHQDHSEEHL 537
GK + + E++
Sbjct: 504 GKRRHDNSENV 514
>emb|CAB78962.1| putative protein [Arabidopsis thaliana] gi|4582488|emb|CAB40377.1|
putative protein [Arabidopsis thaliana]
gi|7486085|pir||T06153 hypothetical protein F24J7.161 -
Arabidopsis thaliana
Length = 533
Score = 403 bits (1036), Expect = e-111
Identities = 264/551 (47%), Positives = 331/551 (59%), Gaps = 59/551 (10%)
Query: 1 MAGLLLGDTSHDGTHQSGSQGCS---QENGSRWYLSRKEIEENSPSKQDGVDLKKEAYLR 57
MAG+L GD S + S S Q+ +RWY RKEIEENSPS+ D +DLKKE YLR
Sbjct: 1 MAGVLAGDCSFGESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLR 60
Query: 58 KSYCTYLQDLGMRLKVPQVTIASAIIFCHRFFLRQSHAKNDRRIIATSCMFLAGKVEETP 117
KSYCT+LQDLGMRLKV + + + L Q+ IAT CMFLAGKVEETP
Sbjct: 61 KSYCTFLQDLGMRLKVTVLRLLLSPFSMLSSLLTQT--------IATVCMFLAGKVEETP 112
Query: 118 RPLKDVILVSYEIIHKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDFHVQHPYK 177
RPLKDVI+VSYEIIHKKDP Q+IKQKEVYEQQKELIL GE++VL+TLGFDF+V HPYK
Sbjct: 113 RPLKDVIVVSYEIIHKKDPTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYK 172
Query: 178 PLVEAIKKLKVSQNALAQVAWNFVNDGLRTSLCLQFKPQHIAAGAIFLAAKFLNVKL--- 234
PLVEAIKK KV+QNALAQVAWNFVNDGLRTSLCLQFKP HIAAGAIFLAAKFL VKL
Sbjct: 173 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 232
Query: 235 -EKLWWQVFDVTLTAHQLEEVSNQMLELYEQNQIAPS--NDVEGTAGGGNRATPKASTSN 291
EK+WWQ FDV T QLE+VSNQMLELYEQN++ S ++VE + GGG+ +
Sbjct: 233 GEKVWWQEFDV--TPRQLEDVSNQMLELYEQNRVPASQVSEVESSVGGGSAHHVGSR--- 287
Query: 292 DEAATTNNNLYIRGPSPRLEASKLAISKNVVSSANHVGPVSNHGTNGSTEMIHLVEGDAK 351
PS RL + + S N+ S SN NGS E ++ + K
Sbjct: 288 --------------PSARL-THEHSNSDNLGGSTKATQNRSN--DNGSGEAGSVIT-EQK 329
Query: 352 GNQHPEQEPPPHKENLQEAQDTVRSRSGYSEEPEINIGRSNMKEDVELNDKHSSKNLNHR 411
G + E + H E+ +SRSG E I K + S+ +
Sbjct: 330 GERDTETKDSMH----TESHPAHKSRSGVEAPGEDKI----EKAGAHFPEDDKSRIVGTA 381
Query: 412 DGTFAPPSLEAIKKIDRDKVKAALEKRKKAVGNITKKTELMDDEDLFERVRELEDGIELA 471
D T + + K+ RDKVKA LE KK G T+K +L+D++DL E RELED +ELA
Sbjct: 382 DVTVSQSPKDI--KMFRDKVKAKLE-AKKVQGEKTRKKDLVDEDDLIE--RELED-VELA 435
Query: 472 AQSEKNKQDDEDLIERVRELEDGIELAAQSEKNKQDGQKSLSKPVDRSAFEN-----MQQ 526
+ +K+ Q+ + E+ DG L +E+ + S + P + E+ + +
Sbjct: 436 VEDDKDIQNKSSMGTEHGEILDGNNLVVNTEEGEMIDDVSSTMPSRKRKMESPCEKQLGE 495
Query: 527 GKHQDHSEEHL 537
GK + + E++
Sbjct: 496 GKRRHDNSENV 506
>gb|AAX92938.1| Cyclin, N-terminal domain, putative [Oryza sativa (japonica
cultivar-group)]
Length = 220
Score = 325 bits (833), Expect = 3e-87
Identities = 163/211 (77%), Positives = 179/211 (84%), Gaps = 7/211 (3%)
Query: 1 MAGLLLGDTSHDGTHQSGSQGCSQEN-------GSRWYLSRKEIEENSPSKQDGVDLKKE 53
M G+ D+SH G ++ + G+ WY SRKEIEENS S++DG+DLKKE
Sbjct: 1 MDGIQTSDSSHHGIVENSPYRTPYDRYAEGGQLGASWYFSRKEIEENSLSRRDGIDLKKE 60
Query: 54 AYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHRFFLRQSHAKNDRRIIATSCMFLAGKV 113
+YLRKSYCT+LQDLGMRLKVPQVTIA+AI+FCHRFFLRQSHAKNDRR IAT CMFLAGKV
Sbjct: 61 SYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKV 120
Query: 114 EETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDFHVQ 173
EETPRPLKDVIL+SYEIIHKKD AAVQRIKQKEVYEQQKELILLGERVVL TLGFD +V
Sbjct: 121 EETPRPLKDVILISYEIIHKKDAAAVQRIKQKEVYEQQKELILLGERVVLVTLGFDLNVH 180
Query: 174 HPYKPLVEAIKKLKVSQNALAQVAWNFVNDG 204
HPYKPLVEAIKK KV+QNALAQVAWNFVNDG
Sbjct: 181 HPYKPLVEAIKKFKVAQNALAQVAWNFVNDG 211
>dbj|BAD94242.1| putative protein [Arabidopsis thaliana] gi|62320075|dbj|BAD94239.1|
putative protein [Arabidopsis thaliana]
Length = 460
Score = 312 bits (800), Expect = 2e-83
Identities = 207/480 (43%), Positives = 276/480 (57%), Gaps = 77/480 (16%)
Query: 30 WYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHRFF 89
W+ SR+EIE NSPS++DG+DLK E LR SYCT+L+ LG RLKVPQVTIA+AI FCHRFF
Sbjct: 31 WFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFF 90
Query: 90 LRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEVYE 149
LRQSHAKNDR+ IAT CM LAGKVEETP L+DVI+ SYE IHKKD A QR KEVY+
Sbjct: 91 LRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHKKDLAGAQR---KEVYD 147
Query: 150 QQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKV--SQNALAQVAWNFVNDGLRT 207
QQKEL+L+GE +VL+TL FD + HPYKPLVEAIKK V ++ LAQ AWNFVND LRT
Sbjct: 148 QQKELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVEDAKTQLAQFAWNFVNDCLRT 207
Query: 208 SLCLQFKPQHIAAGAIFLAAKFLNVKLE---KLWWQVFDVTLTAHQLEEVSNQMLELYEQ 264
+LCLQ++P HIAAGAI LAA+ V L+ ++ Q FD+ T QLE++ Q+LELYE+
Sbjct: 208 TLCLQYQPHHIAAGAILLAAELPTVDLQSYREVLCQEFDI--TPCQLEDIRGQILELYER 265
Query: 265 NQIAPSNDVEGTAGGGNRATPKASTSNDEAATTNNNLYIRGPSPRLEASKLAISKNVVSS 324
+ + VE + G A S D A+T + PS +E + N+ S
Sbjct: 266 IPTSQESKVESS---GGVAVVHQPISRDMASTE------KCPSSDIEGGSSQV--NLSHS 314
Query: 325 ANHVGPVSNHGTNGSTEMIHLVEGDAKGNQHPEQEPPPHKENLQEAQDTVRSRSGYSEEP 384
+H S H + S EG + N E + +NLQ+ S E
Sbjct: 315 DDH----SVHDGSRS-------EGIGEVNSESEAQ-----KNLQD-----HSVGNIMVEK 353
Query: 385 EINIGRSNMKEDVELNDKHSSKNLNHRDGTFAPPSLEAIKKIDRDKVKAALEKRKKAVGN 444
++G +K+D++L+ +++V++ EK KK+
Sbjct: 354 SDDVGVVQLKKDLQLH---------------------------QEEVESKQEKDKKSFEK 386
Query: 445 ITKKTELMDDEDLFERVRELEDGIELAAQSEKNKQDDEDLIERVRELEDGIELAAQSEKN 504
K +LMD++DL E E+ED I K Q + +V + +D + + +N
Sbjct: 387 DITKIDLMDEKDLTE--SEVEDEI------NKTMQTGRQIFMKVEDPDDNMTVEHSEIRN 438
>ref|XP_465361.1| cyclin K-like [Oryza sativa (japonica cultivar-group)]
gi|46805809|dbj|BAD17159.1| cyclin K-like [Oryza sativa
(japonica cultivar-group)]
Length = 630
Score = 276 bits (705), Expect = 2e-72
Identities = 151/352 (42%), Positives = 222/352 (62%), Gaps = 30/352 (8%)
Query: 12 DGTHQSGSQGCSQENGSRWYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRL 71
DG Q+ C E+ WY +R+E+E+ SPS++DG+ E+ +R+ YC++++D+G+RL
Sbjct: 2 DGESQTSKLSC--EHMYSWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRL 59
Query: 72 KVPQVTIASAIIFCHRFFLRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEII 131
K+PQ+TIA+AI+FCHRF+L QS AKN + IAT C+FLA KVE+TP PL VI V+Y +
Sbjct: 60 KLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTM 119
Query: 132 HKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQN 191
+++DPA +RI QK+V+E+QK LIL GER+VL T+ FDF++QHPY+PL++A++KL +SQ
Sbjct: 120 YRRDPATARRIHQKDVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQK 179
Query: 192 ALAQVAWNFVNDGLRTSLCLQFKPQHIAAGAIFLAAKFLNVKLE----KLWWQVFDVTLT 247
+ QVAWNFVND L+T+LCLQ+KPQ+IAAG+++LAAKF NVKL +WW FDV
Sbjct: 180 EVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDV--A 237
Query: 248 AHQLEEVSNQMLELYEQNQIAPSNDVEGTAGGGNRATPKASTSNDEAATTNNNLYIRGPS 307
LE V QM E+ + E L P
Sbjct: 238 PKPLEAVLQQMREMVHMK--------------AKLFAHPSPAKQKEVLFEGMLLISNSPD 283
Query: 308 PRLEASKLAISKNVVSSANHVGPVSNH-GTNGSTEMIHLVEGDAKGNQHPEQ 358
L S L++S SS+ +G ++H + S +++H+ + + +PE+
Sbjct: 284 SVLTQSSLSVS----SSSPEIGDPNDHLQVDSSQDIVHI---EDRSKSYPER 328
>ref|XP_464024.1| cyclin T2-like protein [Oryza sativa (japonica cultivar-group)]
gi|41052605|dbj|BAD07997.1| cyclin T2-like protein
[Oryza sativa (japonica cultivar-group)]
Length = 446
Score = 268 bits (684), Expect = 5e-70
Identities = 129/236 (54%), Positives = 182/236 (76%), Gaps = 5/236 (2%)
Query: 30 WYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHRFF 89
WY++R E+E SPS++DGV KEA LR +YC++++D+G+RL++PQVTIA+A + CHRF+
Sbjct: 9 WYVTRDEVERGSPSRRDGVGAAKEAELRATYCSFIRDVGLRLQLPQVTIATATLLCHRFY 68
Query: 90 LRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEVYE 149
LRQSHAKN+ + +AT C+FLA K+E+TP PL+ VI+V+YE +++KD A RI QKEV E
Sbjct: 69 LRQSHAKNEWQTVATVCVFLASKIEDTPCPLQRVIIVAYETMYRKDCNAAHRIYQKEVLE 128
Query: 150 QQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQVAWNFVNDGLRTSL 209
+QKELIL+GE ++L+T+ FDF++QHPY+PL A+KKL + Q + QVA N +ND +RT+L
Sbjct: 129 KQKELILVGETLLLSTIRFDFNIQHPYEPLKLALKKLGIFQMEVKQVAVNLINDAIRTTL 188
Query: 210 CLQFKPQHIAAGAIFLAAKFLNVKLE---KLWWQVFDVTLTAHQLEEVSNQMLELY 262
+QFKP +IAAG+++LAAKF N +L K+WW FDV QL+ V QM EL+
Sbjct: 189 VVQFKPHYIAAGSLYLAAKFNNFRLPSDGKVWWHEFDV--APKQLQAVIQQMTELF 242
>emb|CAB78958.1| putative protein [Arabidopsis thaliana] gi|2853083|emb|CAA16933.1|
putative protein [Arabidopsis thaliana]
gi|15235087|ref|NP_193691.1| cyclin family protein
[Arabidopsis thaliana] gi|7486081|pir||T06149
hypothetical protein F24J7.120 - Arabidopsis thaliana
Length = 474
Score = 241 bits (616), Expect = 4e-62
Identities = 184/496 (37%), Positives = 253/496 (50%), Gaps = 95/496 (19%)
Query: 30 WYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHR-- 87
W+ SR+EIE NSPS++DG+DLK E LR SYCT+L+ LG RLK+ C R
Sbjct: 31 WFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKMSLPDFIHDKTVCDRDQ 90
Query: 88 ---FFLRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQ 144
FF S IAT CM LAGKVEETP L+DVI+ SYE IHKKD A QR
Sbjct: 91 ALCFFPFGSMCMT----IATVCMLLAGKVEETPVTLEDVIIASYERIHKKDLAGAQR--- 143
Query: 145 KEVYEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKV--SQNALAQVAWNFVN 202
KEVY+QQKEL+L+GE +VL+TL FD + HPYKPLVEAIKK V ++ LAQ AWNFVN
Sbjct: 144 KEVYDQQKELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVEDAKTQLAQFAWNFVN 203
Query: 203 DGLRTSLCLQFKPQHIAAGAIFLAAKFLNVKLE---KLWWQVFDVT-----------LTA 248
D LRT+LCLQ++P HIAAGAI LAA+ V L+ ++ Q FD+T +
Sbjct: 204 DCLRTTLCLQYQPHHIAAGAILLAAELPTVDLQSYREVLCQEFDITPCQLEDLVDVVNLS 263
Query: 249 HQLEEVSNQMLELYEQNQIAPSNDVEGTAGGGNRATPKASTSNDEAATTNNNLYIRGPSP 308
++ Q+LELYE+ + + VE + G A S D A+T + PS
Sbjct: 264 FAFSDIRGQILELYERIPTSQESKVESS---GGVAVVHQPISRDMASTE------KCPSS 314
Query: 309 RLEASKLAISKNVVSSANHVGPVSNHGTNGSTEMIHLVEGDAKGNQHPEQEPPPHKENLQ 368
+E + N+ S +H S H + S EG + N E + +NLQ
Sbjct: 315 DIEGGSSQV--NLSQSDDH----SVHDGSRS-------EGIGEVNSESEAQ-----KNLQ 356
Query: 369 EAQDTVRSRSGYSEEPEINIGRSNMKEDVELNDKHSSKNLNHRDGTFAPPSLEAIKKIDR 428
+ S E ++G +K+D++L+ +
Sbjct: 357 D-----HSVGNIMVEKSDDVGVVQLKKDLQLH---------------------------Q 384
Query: 429 DKVKAALEKRKKAVGNITKKTELMDDEDLFERVRELEDGIELAAQSEKNKQDDEDLIERV 488
++V++ EK KK+ K +LMD++DL E E+ED I K Q + +V
Sbjct: 385 EEVESKQEKDKKSFEKDITKIDLMDEKDLTE--SEVEDEI------NKTMQTGRQIFMKV 436
Query: 489 RELEDGIELAAQSEKN 504
+ +D + + +N
Sbjct: 437 EDPDDNMTVEHSEIRN 452
>gb|AAK06874.1| putative cyclin [Arabidopsis thaliana] gi|26450460|dbj|BAC42344.1|
putative cyclin [Arabidopsis thaliana]
gi|15217663|ref|NP_174084.1| cyclin family protein
[Arabidopsis thaliana] gi|5668773|gb|AAD46000.1|
Contains similarity to gb|AF113001 silencing mediator of
retinoic acid and thyroid hormone receptor alpha and
gb|AF109179 cyclin T1 from Mus musculus. ESTs
gb|N95317, gb|Z29139 and gb|Z30853 come from this gene.
[Arabidopsis thaliana]
Length = 317
Score = 236 bits (603), Expect = 1e-60
Identities = 123/238 (51%), Positives = 164/238 (68%), Gaps = 5/238 (2%)
Query: 28 SRWYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHR 87
S+WY SR+EIE SPS++DG+DL KE++LR SYCT+LQ LGM+L V QVTI+ A++ CHR
Sbjct: 32 SKWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHR 91
Query: 88 FFLRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEV 147
F++RQSHAKND + IATS +FLA K E+ P L V++ SYEII++ DP+A RI Q E
Sbjct: 92 FYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTEC 151
Query: 148 YEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQVAWNFVNDGLRT 207
Y + KE+IL GE ++L+T F ++ PYKPL A+ +L + LA AWNFV+D +RT
Sbjct: 152 YHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLNAWPD-LATAAWNFVHDWIRT 210
Query: 208 SLCLQFKPQHIAAGAIFLAAKFLNVKL--EKLWWQVFDVTLTAHQLEEVSNQMLELYE 263
+LCLQ+KP IA + LAA F N K+ + WW F V T L+EV +M L E
Sbjct: 211 TLCLQYKPHVIATATVHLAATFQNAKVGSRRDWWLEFGV--TTKLLKEVIQEMCTLIE 266
>gb|AAM67327.1| putative cyclin [Arabidopsis thaliana]
Length = 317
Score = 236 bits (603), Expect = 1e-60
Identities = 123/238 (51%), Positives = 164/238 (68%), Gaps = 5/238 (2%)
Query: 28 SRWYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHR 87
S+WY SR+EIE SPS++DG+DL KE++LR SYCT+LQ LGM+L V QVTI+ A++ CHR
Sbjct: 32 SKWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHR 91
Query: 88 FFLRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEV 147
F++RQSHAKND + IATS +FLA K E+ P L V++ SYEII++ DP+A RI Q E
Sbjct: 92 FYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTEC 151
Query: 148 YEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQVAWNFVNDGLRT 207
Y + KE+IL GE ++L+T F ++ PYKPL A+ +L + LA AWNFV+D +RT
Sbjct: 152 YHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLNAWPD-LATAAWNFVHDWIRT 210
Query: 208 SLCLQFKPQHIAAGAIFLAAKFLNVKL--EKLWWQVFDVTLTAHQLEEVSNQMLELYE 263
+LCLQ+KP IA + LAA F N K+ + WW F V T L+EV +M L E
Sbjct: 211 TLCLQYKPHVIATATVHLAATFQNAKVGSRRDWWLEFGV--TTKLLKEVIQEMCTLIE 266
>gb|AAR01224.1| cyclin T1 [Medicago truncatula]
Length = 372
Score = 227 bits (578), Expect = 1e-57
Identities = 114/234 (48%), Positives = 166/234 (70%), Gaps = 4/234 (1%)
Query: 31 YLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHRFFL 90
++SR +I+ NSPS++DG+D+ E +LR SYC +LQ+LG RL++PQ TI ++++ CHRFF+
Sbjct: 141 FMSRDDIDRNSPSRKDGIDVLHETHLRYSYCAFLQNLGTRLEMPQTTIGTSMVLCHRFFV 200
Query: 91 RQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEVYEQ 150
R+SHA +DR +IAT+ +FLAGK EE+P PL V+ S E++HK+D A + + +EQ
Sbjct: 201 RRSHACHDRFLIATAALFLAGKSEESPCPLNSVLRTSSELLHKQDFAFLSYWFPVDWFEQ 260
Query: 151 QKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQVAWNFVNDGLRTSLC 210
+E +L E+++L TL F+ VQHPY PL + KL +S+ L +A N V++GLR+SL
Sbjct: 261 YRERVLEAEQLILTTLNFELGVQHPYAPLTSVLNKLGLSKTVLVNMALNLVSEGLRSSLW 320
Query: 211 LQFKPQHIAAGAIFLAAKFLNVKLE--KLWWQVFDVTLTAHQLEEVSNQMLELY 262
LQFKP IAAGA +LAAKFLN+ L K WQ F T + L++VS Q++EL+
Sbjct: 321 LQFKPHQIAAGAAYLAAKFLNMDLAAYKNIWQEFQATPSV--LQDVSQQLMELF 372
>ref|NP_174775.1| cyclin family protein [Arabidopsis thaliana]
gi|12324285|gb|AAG52114.1| hypothetical protein;
32762-33505 [Arabidopsis thaliana]
gi|25366902|pir||E86475 hypothetical protein F12A4.13 -
Arabidopsis thaliana
Length = 247
Score = 224 bits (570), Expect = 9e-57
Identities = 114/246 (46%), Positives = 165/246 (66%), Gaps = 15/246 (6%)
Query: 30 WYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHRFF 89
WY +R+ IE+ SPS+ DG++LK+E + R SY ++LQ+LG RL PQ TIA+AI+ C RFF
Sbjct: 7 WYNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFF 66
Query: 90 LRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEVYE 149
RQS KND + +A CMF+AGKVE +PRP DV+ VSY ++ K+P ++V+E
Sbjct: 67 TRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPL-------RDVFE 119
Query: 150 QQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNA--LAQVAWNFVNDGLRT 207
+ K +L GE++VL+TL D ++HPYK +++ +K+ +++ L Q A+NFVND LRT
Sbjct: 120 RLKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKTEDGRRLCQAAFNFVNDSLRT 179
Query: 208 SLCLQFKPQHIAAGAIFLAAKFLNVKL----EKLWWQVFDVTLTAHQLEEVSNQMLELYE 263
SLCLQF P IA+ AI++ + L +K WW+ FDV T QL E+ +QML+LY
Sbjct: 180 SLCLQFGPSQIASAAIYIGLSMCKMTLPCDGDKAWWREFDV--TKRQLWEICDQMLDLYV 237
Query: 264 QNQIAP 269
Q+ + P
Sbjct: 238 QDFVVP 243
>ref|XP_637571.1| hypothetical protein DDB0187046 [Dictyostelium discoideum]
gi|60465997|gb|EAL64064.1| hypothetical protein
DDB0187046 [Dictyostelium discoideum]
Length = 405
Score = 203 bits (516), Expect = 2e-50
Identities = 123/329 (37%), Positives = 195/329 (58%), Gaps = 34/329 (10%)
Query: 25 ENGSRWYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIF 84
++ S W+ S++++ ++ G++LK E R++ ++QD+G++LK+PQ+TIA+AI +
Sbjct: 4 KSNSHWFFSKEQVLKHYSL---GIELKLEVAYRRASAAFIQDVGIKLKMPQLTIATAISY 60
Query: 85 CHRFFLRQSHAKNDR--------RIIATSCMFLAGKVEETPRPLKDVILVSYEIIH-KKD 135
HRFF+R +DR ++AT+C+FLAGKVEETPR L DVI VSY I + KKD
Sbjct: 61 FHRFFIRHQLKDHDRFVCINIDSPVVATACLFLAGKVEETPRKLDDVIKVSYMIKNKKKD 120
Query: 136 PAAVQRIKQKEVYEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQ 195
+ I Q+E + K IL E ++L T+ F+ V+HPYK L+E +K ++ S+N L Q
Sbjct: 121 GDKMVAISQQE-HNNLKNKILQNEHLILTTIAFELAVEHPYKYLLEYMKSIQGSKN-LCQ 178
Query: 196 VAWNFVNDGLRTSLCLQFKPQHIAAGAIFLAAKFLNVKL----EKLWWQVFDVTLTAHQL 251
VAWNFVND LRTSLCL + P I+ +I+LA +FLN +L +K WW++ + L
Sbjct: 179 VAWNFVNDSLRTSLCLHYPPDLISYASIYLATRFLNYQLITENKKEWWEMLGIKFEV--L 236
Query: 252 EEVSNQMLELYEQNQIAPSNDVEGTAGGGNRATPKASTSNDEAATTNNNLYIRGPSPRLE 311
E++S Q+L+LYE N + + + P +S+S + +T + P+P +
Sbjct: 237 EDISKQILDLYEANPLQQTATI-----------PSSSSSTPTSTSTTTSTSSPSPNPS-Q 284
Query: 312 ASKLAISKNVVSSANHVGPVSNHGTNGST 340
L +N ++N+ +N+ T ST
Sbjct: 285 PQPLPPQQN--ENSNNSNNSNNNTTTTST 311
>gb|AAH44435.1| Wu:fi75b02 protein [Danio rerio]
Length = 679
Score = 167 bits (424), Expect = 7e-40
Identities = 95/280 (33%), Positives = 159/280 (55%), Gaps = 11/280 (3%)
Query: 25 ENGSRWYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIF 84
+N ++WY +R++IE NSPS++ G+D KE R+ LQD+G RL V Q+TI +AI++
Sbjct: 15 QNNNKWYFTREQIE-NSPSRRAGLDPDKELLYRQQAANLLQDMGQRLNVSQLTINTAIVY 73
Query: 85 CHRFFLRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQ 144
HRF++ QS + R +IA + +FLA KVEE PR L+ VI V++ ++ +DP+ R
Sbjct: 74 MHRFYMVQSFTRFHRNVIAPAALFLAAKVEEQPRKLEHVIKVTHACLNPQDPSPDTR--- 130
Query: 145 KEVYEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQVAWNFVNDG 204
+ Y QQ + +++ E ++L TLGF+ + HP+ +V+ + ++ S++ LAQ ++ +
Sbjct: 131 SDTYLQQAQDLVILESIILQTLGFEITIDHPHTHVVKCTQLVRASKD-LAQTSYFMATNS 189
Query: 205 LR-TSLCLQFKPQHIAAGAIFLAAKFLNVKLE-----KLWWQVFDVTLTAHQLEEVSNQM 258
L T+ CLQ+ P +A I LA K+ N ++ K WWQ D T+T L+E++++
Sbjct: 190 LHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWQYVDPTVTLELLDELTHEF 249
Query: 259 LELYEQNQIAPSNDVEGTAGGGNRATPKASTSNDEAATTN 298
L++ E+ A G K + A N
Sbjct: 250 LQILEKTPSRLKRTRNWKAAGQTAKKSKVQDGDQSEAIMN 289
>gb|AAH57477.1| Wu:fi75b02 protein [Danio rerio]
Length = 683
Score = 166 bits (421), Expect = 2e-39
Identities = 95/280 (33%), Positives = 159/280 (55%), Gaps = 11/280 (3%)
Query: 25 ENGSRWYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIF 84
+N ++WY +R++IE NSPS++ G+D KE R+ LQD+G RL V Q+TI +AI++
Sbjct: 19 QNNNKWYFTREQIE-NSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVY 77
Query: 85 CHRFFLRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQ 144
HRF++ QS + R +IA + +FLA KVEE PR L+ VI V++ ++ +DP+ R
Sbjct: 78 MHRFYMVQSFTRFHRDVIAPAALFLAAKVEEQPRKLEHVIKVTHACLNPQDPSPDTR--- 134
Query: 145 KEVYEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQVAWNFVNDG 204
+ Y QQ + +++ E ++L TLGF+ + HP+ +V+ + ++ S++ LAQ ++ +
Sbjct: 135 SDTYLQQAQDLVILESIILQTLGFEITIDHPHTHVVKCTQLVRASKD-LAQTSYFMATNS 193
Query: 205 LR-TSLCLQFKPQHIAAGAIFLAAKFLNVKLE-----KLWWQVFDVTLTAHQLEEVSNQM 258
L T+ CLQ+ P +A I LA K+ N ++ K WWQ D T+T L+E++++
Sbjct: 194 LHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWQYVDPTVTLELLDELTHEF 253
Query: 259 LELYEQNQIAPSNDVEGTAGGGNRATPKASTSNDEAATTN 298
L++ E+ A G K + A N
Sbjct: 254 LQILEKTPSRLKRTRNWKAAGQTAKKSKVQDGDQSEAIMN 293
>ref|NP_001232.1| cyclin T2 isoform a [Homo sapiens] gi|2981198|gb|AAC39665.1| cyclin
T2a [Homo sapiens]
Length = 663
Score = 164 bits (415), Expect = 8e-39
Identities = 151/597 (25%), Positives = 276/597 (45%), Gaps = 62/597 (10%)
Query: 28 SRWYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHR 87
SRW+ +R+++E N+PS++ GV+ KE R+ +Q++G RL V Q+TI +AI++ HR
Sbjct: 9 SRWFFTREQLE-NTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHR 67
Query: 88 FFLRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEV 147
F++ S K ++ II+++ +FLA KVEE R L+ VI V++ +H +P + +
Sbjct: 68 FYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKC---DA 124
Query: 148 YEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQVAWNFVNDGLR- 206
Y QQ + +++ E ++L TLGF+ ++HP+ +V+ + ++ S++ LAQ ++ + L
Sbjct: 125 YLQQTQELVILETIMLQTLGFEITIEHPHTDVVKCTQLVRASKD-LAQTSYFMATNSLHL 183
Query: 207 TSLCLQFKPQHIAAGAIFLAAKFLNVKLE-----KLWWQVFDVTLTAHQLEEVSNQMLEL 261
T+ CLQ+KP IA I LA K+ N ++ K WW+ D T+T L+E++++ L++
Sbjct: 184 TTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQI 243
Query: 262 YEQ-------------NQIAPSNDVEGTAGGGNRATPKASTSNDEAATTNNNLYIRGPSP 308
E+ NQ A V+G TP +S + + +++ +P
Sbjct: 244 LEKTPNRLKKIRNWRANQAARKPKVDGQVS----ETPLLGSSLVQNSILVDSVTGVPTNP 299
Query: 309 RLE-ASKLAISKNVVSSANHVGPVSNHGTNGSTEMIHLVEGDAKGNQHPEQEPPPHKENL 367
+ S A V ++ ++ +H T+ + M+ QE P H
Sbjct: 300 SFQKPSTSAFPAPVPLNSGNISVQDSH-TSDNLSMLATGMPSTSYGLSSHQEWPQH---- 354
Query: 368 QEAQDTVRSRSGYSEEPEINIGRSNMKEDVELNDKHS-SKNLNHRDGTFAPPSLEAIKKI 426
QD+ R+ YS++ E ++ S + + S L+HR + S ++K+
Sbjct: 355 ---QDSARTEQLYSQKQETSLSGSQYNINFQQGPSISLHSGLHHRPDKISDHS--SVKQE 409
Query: 427 DRDKVKAALEKRKKAVGNITKKTELMDDEDLFERVRELEDGIELAAQSEKNKQDDEDLIE 486
K ++ K G I+ ++ + ++ R EK K + DL
Sbjct: 410 YTHKAGSS-----KHHGPISTTPGIIPQKMSLDKYR------------EKRKLETLDLDV 452
Query: 487 RVRELEDGIELAAQSEKNKQDGQKSLSKPVDRSAFENMQQGKHQDHSEE--HLHLVKPSH 544
R + +E + +++ S++ P+ + D E+ L L P
Sbjct: 453 RDHYIAAQVEQQHKQGQSQAASSSSVTSPIKMKIPIANTEKYMADKKEKSGSLKLRIPIP 512
Query: 545 ETDLSAVEEGEVSALDDIDLGRKSSNHK---RKAESSPDKFAEGKKRHNYSFGSTHH 598
TD SA +E + R SS+ + + SSP + K++H S HH
Sbjct: 513 PTDKSASKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKEKHKEHPSSRHH 569
>gb|AAY14998.1| unknown [Homo sapiens] gi|17978469|ref|NP_490595.1| cyclin T2
isoform b [Homo sapiens]
gi|62906880|sp|O60583|CCNT2_HUMAN Cyclin T2
gi|57790282|gb|AAW56073.1| cyclin T2 [Homo sapiens]
Length = 730
Score = 164 bits (415), Expect = 8e-39
Identities = 151/597 (25%), Positives = 276/597 (45%), Gaps = 62/597 (10%)
Query: 28 SRWYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHR 87
SRW+ +R+++E N+PS++ GV+ KE R+ +Q++G RL V Q+TI +AI++ HR
Sbjct: 9 SRWFFTREQLE-NTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHR 67
Query: 88 FFLRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEV 147
F++ S K ++ II+++ +FLA KVEE R L+ VI V++ +H +P + +
Sbjct: 68 FYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKC---DA 124
Query: 148 YEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQVAWNFVNDGLR- 206
Y QQ + +++ E ++L TLGF+ ++HP+ +V+ + ++ S++ LAQ ++ + L
Sbjct: 125 YLQQTQELVILETIMLQTLGFEITIEHPHTDVVKCTQLVRASKD-LAQTSYFMATNSLHL 183
Query: 207 TSLCLQFKPQHIAAGAIFLAAKFLNVKLE-----KLWWQVFDVTLTAHQLEEVSNQMLEL 261
T+ CLQ+KP IA I LA K+ N ++ K WW+ D T+T L+E++++ L++
Sbjct: 184 TTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQI 243
Query: 262 YEQ-------------NQIAPSNDVEGTAGGGNRATPKASTSNDEAATTNNNLYIRGPSP 308
E+ NQ A V+G TP +S + + +++ +P
Sbjct: 244 LEKTPNRLKKIRNWRANQAARKPKVDGQVS----ETPLLGSSLVQNSILVDSVTGVPTNP 299
Query: 309 RLE-ASKLAISKNVVSSANHVGPVSNHGTNGSTEMIHLVEGDAKGNQHPEQEPPPHKENL 367
+ S A V ++ ++ +H T+ + M+ QE P H
Sbjct: 300 SFQKPSTSAFPAPVPLNSGNISVQDSH-TSDNLSMLATGMPSTSYGLSSHQEWPQH---- 354
Query: 368 QEAQDTVRSRSGYSEEPEINIGRSNMKEDVELNDKHS-SKNLNHRDGTFAPPSLEAIKKI 426
QD+ R+ YS++ E ++ S + + S L+HR + S ++K+
Sbjct: 355 ---QDSARTEQLYSQKQETSLSGSQYNINFQQGPSISLHSGLHHRPDKISDHS--SVKQE 409
Query: 427 DRDKVKAALEKRKKAVGNITKKTELMDDEDLFERVRELEDGIELAAQSEKNKQDDEDLIE 486
K ++ K G I+ ++ + ++ R EK K + DL
Sbjct: 410 YTHKAGSS-----KHHGPISTTPGIIPQKMSLDKYR------------EKRKLETLDLDV 452
Query: 487 RVRELEDGIELAAQSEKNKQDGQKSLSKPVDRSAFENMQQGKHQDHSEE--HLHLVKPSH 544
R + +E + +++ S++ P+ + D E+ L L P
Sbjct: 453 RDHYIAAQVEQQHKQGQSQAASSSSVTSPIKMKIPIANTEKYMADKKEKSGSLKLRIPIP 512
Query: 545 ETDLSAVEEGEVSALDDIDLGRKSSNHK---RKAESSPDKFAEGKKRHNYSFGSTHH 598
TD SA +E + R SS+ + + SSP + K++H S HH
Sbjct: 513 PTDKSASKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKEKHKEHPSSRHH 569
>gb|AAC39666.1| cyclin T2b [Homo sapiens]
Length = 730
Score = 164 bits (415), Expect = 8e-39
Identities = 151/597 (25%), Positives = 276/597 (45%), Gaps = 62/597 (10%)
Query: 28 SRWYLSRKEIEENSPSKQDGVDLKKEAYLRKSYCTYLQDLGMRLKVPQVTIASAIIFCHR 87
SRW+ +R+++E N+PS++ GV+ KE R+ +Q++G RL V Q+TI +AI++ HR
Sbjct: 9 SRWFFTREQLE-NTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHR 67
Query: 88 FFLRQSHAKNDRRIIATSCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKEV 147
F++ S K ++ II+++ +FLA KVEE R L+ VI V++ +H +P + +
Sbjct: 68 FYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKC---DA 124
Query: 148 YEQQKELILLGERVVLATLGFDFHVQHPYKPLVEAIKKLKVSQNALAQVAWNFVNDGLR- 206
Y QQ + +++ E ++L TLGF+ ++HP+ +V+ + ++ S++ LAQ ++ + L
Sbjct: 125 YLQQTQELVILETIMLQTLGFEITIEHPHTDVVKCTQLVRASKD-LAQTSYFMATNSLHL 183
Query: 207 TSLCLQFKPQHIAAGAIFLAAKFLNVKLE-----KLWWQVFDVTLTAHQLEEVSNQMLEL 261
T+ CLQ+KP IA I LA K+ N ++ K WW+ D T+T L+E++++ L++
Sbjct: 184 TTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQI 243
Query: 262 YEQ-------------NQIAPSNDVEGTAGGGNRATPKASTSNDEAATTNNNLYIRGPSP 308
E+ NQ A V+G TP +S + + +++ +P
Sbjct: 244 LEKTPNRLKKIRNWRANQAARKPKVDGQVS----ETPLLGSSLVQNSILVDSVTGVPTNP 299
Query: 309 RLE-ASKLAISKNVVSSANHVGPVSNHGTNGSTEMIHLVEGDAKGNQHPEQEPPPHKENL 367
+ S A V ++ ++ +H T+ + M+ QE P H
Sbjct: 300 SFQKPSTSAFPAPVPLNSGNISVQDSH-TSDNLSMLATGMPSTSYGLSSHQEWPQH---- 354
Query: 368 QEAQDTVRSRSGYSEEPEINIGRSNMKEDVELNDKHS-SKNLNHRDGTFAPPSLEAIKKI 426
QD+ R+ YS++ E ++ S + + S L+HR + S ++K+
Sbjct: 355 ---QDSARTEQLYSQKQETSLSGSQYNINFQQGPSISLHSGLHHRPDKISDHS--SVKQE 409
Query: 427 DRDKVKAALEKRKKAVGNITKKTELMDDEDLFERVRELEDGIELAAQSEKNKQDDEDLIE 486
K ++ K G I+ ++ + ++ R EK K + DL
Sbjct: 410 YTHKAGSS-----KHHGPISTTPGIIPQKMSLDKYR------------EKRKLETLDLDV 452
Query: 487 RVRELEDGIELAAQSEKNKQDGQKSLSKPVDRSAFENMQQGKHQDHSEE--HLHLVKPSH 544
R + +E + +++ S++ P+ + D E+ L L P
Sbjct: 453 RDHYIAAQVEQQHKQGQSQAASSSSVTSPIKMKIPIANTEKYMADKKEKSGSLKLRIPIP 512
Query: 545 ETDLSAVEEGEVSALDDIDLGRKSSNHK---RKAESSPDKFAEGKKRHNYSFGSTHH 598
TD SA +E + R SS+ + + SSP + K++H S HH
Sbjct: 513 PTDKSASKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKEKHKEHPSSRHH 569
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,078,674,405
Number of Sequences: 2540612
Number of extensions: 46481070
Number of successful extensions: 146126
Number of sequences better than 10.0: 2591
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 2393
Number of HSP's that attempted gapping in prelim test: 140655
Number of HSP's gapped (non-prelim): 5678
length of query: 629
length of database: 863,360,394
effective HSP length: 134
effective length of query: 495
effective length of database: 522,918,386
effective search space: 258844601070
effective search space used: 258844601070
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0176a.15