BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0176a.14
(641 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199332.2| cyclin family protein [Arabidopsis thaliana] 566 e-160
dbj|BAB11392.1| unnamed protein product [Arabidopsis thaliana] 560 e-158
dbj|BAC42172.1| unknown protein [Arabidopsis thaliana] gi|306848... 519 e-145
gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa... 494 e-138
emb|CAB78962.1| putative protein [Arabidopsis thaliana] gi|45824... 457 e-127
gb|AAX92938.1| Cyclin, N-terminal domain, putative [Oryza sativa... 346 1e-93
dbj|BAD94242.1| putative protein [Arabidopsis thaliana] gi|62320... 337 7e-91
ref|XP_465361.1| cyclin K-like [Oryza sativa (japonica cultivar-... 297 8e-79
ref|XP_464024.1| cyclin T2-like protein [Oryza sativa (japonica ... 291 6e-77
emb|CAB78958.1| putative protein [Arabidopsis thaliana] gi|28530... 264 8e-69
ref|NP_174775.1| cyclin family protein [Arabidopsis thaliana] gi... 252 3e-65
gb|AAK06874.1| putative cyclin [Arabidopsis thaliana] gi|2645046... 249 3e-64
gb|AAM67327.1| putative cyclin [Arabidopsis thaliana] 249 3e-64
gb|AAR01224.1| cyclin T1 [Medicago truncatula] 238 4e-61
ref|XP_637571.1| hypothetical protein DDB0187046 [Dictyostelium ... 215 4e-54
gb|AAH44435.1| Wu:fi75b02 protein [Danio rerio] 173 1e-41
gb|AAF24942.1| T22C5.8 [Arabidopsis thaliana] 172 2e-41
gb|AAH57477.1| Wu:fi75b02 protein [Danio rerio] 172 4e-41
gb|AAH44378.1| Cyclin T2 [Danio rerio] gi|41054169|ref|NP_956122... 164 6e-39
ref|NP_064321.1| cyclin L1 [Mus musculus] gi|5453421|gb|AAD43568... 162 2e-38
>ref|NP_199332.2| cyclin family protein [Arabidopsis thaliana]
Length = 579
Score = 566 bits (1459), Expect = e-160
Identities = 337/648 (52%), Positives = 416/648 (64%), Gaps = 81/648 (12%)
Query: 1 MAGLLLGDISHHGSYQSGSQGGSQDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLR 60
MAG+L G+ S+ S S S + QE SRWYF RKEIEENSPS+ DG+DLKKE YLR
Sbjct: 1 MAGVLAGECSYSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLR 60
Query: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETP 120
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF RQSHAKNDRR IATVCMFLAGKVEETP
Sbjct: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETP 120
Query: 121 RPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYK 180
RPLKDVI VSYEII+KKDP A Q+IKQK+VYEQQKELIL GE++VL+TLGFDLNV+HPYK
Sbjct: 121 RPLKDVIFVSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYK 180
Query: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD
Sbjct: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
Query: 241 GEKVWWQEFDVTPRQLEEVSNQMLELYEQNRM--AQSNDVEGTTGGGNRATPKAPTSNDE 298
GEKVWWQEFDVTPRQLE+VSNQMLELYEQNR+ +Q ++VE + GGG+ P +
Sbjct: 241 GEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQGSEVESSVGGGSAQRP----GSRN 296
Query: 299 AASTNRNLHIGGPSSTLETSKPATSKNVFVSSANHVGRPVSNHG---VSGSTEVKHPVED 355
A ST+ ++ SS T + + S N SS + + N G + S + K +E
Sbjct: 297 AVSTDEHVGSRQTSSVRSTHEQSNSDNHGGSSKGVLNQNNENGGGEAANVSVDNKEEIER 356
Query: 356 DVK-GNLHPKQEPSAYEENMQEAQDMVRSRSGYAKGNQHPKQEPSTYEEKMQEAQDMVRS 414
+ K +LH + P A+++N++EA N P E
Sbjct: 357 ETKESSLHLESHP-AHKDNVREAPH-----------NSRPLVE----------------- 387
Query: 415 RSGYGKEQESNVGRSNIKEEDVELNDK---HSSKNLNHRDATFASPNLEGIKKIDRDKVK 471
G+ N + E EL D H S+N++ DA + + K+ RDKVK
Sbjct: 388 ----------GPGKDNSEREGGELQDDGAVHKSRNVDVGDALISQSPKD--LKLLRDKVK 435
Query: 472 AALEKRKKATGNISKKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKSLDRS 531
A EK KK G ++K +L+D++DLIE RELED ++LA + EK K+ +S K+ + S
Sbjct: 436 AKREKAKKLLGERTRKKDLMDEDDLIE--RELED-VQLAVEDEKTKERKVQSRPKA-ENS 491
Query: 532 AFENMQHGKHQDHSEEHLHLVKPSHEADLSAVEEGEVSALDDIDLGPKSSNQKRKVESSP 591
+HG+ D + ++ EEGE + + ++ P ++KRK+ S P
Sbjct: 492 DLMGTEHGEILD------------VKGEVKNTEEGE---MVNNNVSPMMHSRKRKMGSPP 536
Query: 592 DNFVEGKKRHNYGSGSTHHNRIDYIEDRNKVNRLGHAERDSKRHIQEN 639
+ EGK+RHN +G H + H +R+ +RH QEN
Sbjct: 537 EKQSEGKRRHNSENGEESH--------KTSRGSSHHGDREHRRHSQEN 576
>dbj|BAB11392.1| unnamed protein product [Arabidopsis thaliana]
Length = 583
Score = 560 bits (1444), Expect = e-158
Identities = 337/652 (51%), Positives = 416/652 (63%), Gaps = 85/652 (13%)
Query: 1 MAGLLLGDISHHGSYQSGSQGGSQDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLR 60
MAG+L G+ S+ S S S + QE SRWYF RKEIEENSPS+ DG+DLKKE YLR
Sbjct: 1 MAGVLAGECSYSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLR 60
Query: 61 KSYCTFLQDLGMRLKV----PQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKV 116
KSYCTFLQDLGMRLKV PQVTIATAIIFCHRFF RQSHAKNDRR IATVCMFLAGKV
Sbjct: 61 KSYCTFLQDLGMRLKVFPISPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKV 120
Query: 117 EETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVH 176
EETPRPLKDVI VSYEII+KKDP A Q+IKQK+VYEQQKELIL GE++VL+TLGFDLNV+
Sbjct: 121 EETPRPLKDVIFVSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVY 180
Query: 177 HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVK 236
HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVK
Sbjct: 181 HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVK 240
Query: 237 LPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRM--AQSNDVEGTTGGGNRATPKAPT 294
LPSDGEKVWWQEFDVTPRQLE+VSNQMLELYEQNR+ +Q ++VE + GGG+ P
Sbjct: 241 LPSDGEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQGSEVESSVGGGSAQRP---- 296
Query: 295 SNDEAASTNRNLHIGGPSSTLETSKPATSKNVFVSSANHVGRPVSNHG---VSGSTEVKH 351
+ A ST+ ++ SS T + + S N SS + + N G + S + K
Sbjct: 297 GSRNAVSTDEHVGSRQTSSVRSTHEQSNSDNHGGSSKGVLNQNNENGGGEAANVSVDNKE 356
Query: 352 PVEDDVK-GNLHPKQEPSAYEENMQEAQDMVRSRSGYAKGNQHPKQEPSTYEEKMQEAQD 410
+E + K +LH + P A+++N++EA N P E
Sbjct: 357 EIERETKESSLHLESHP-AHKDNVREAPH-----------NSRPLVE------------- 391
Query: 411 MVRSRSGYGKEQESNVGRSNIKEEDVELNDK---HSSKNLNHRDATFASPNLEGIKKIDR 467
G+ N + E EL D H S+N++ DA + + K+ R
Sbjct: 392 --------------GPGKDNSEREGGELQDDGAVHKSRNVDVGDALISQSPKD--LKLLR 435
Query: 468 DKVKAALEKRKKATGNISKKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKS 527
DKVKA EK KK G ++K +L+D++DLIE RELED ++LA + EK K+ +S K+
Sbjct: 436 DKVKAKREKAKKLLGERTRKKDLMDEDDLIE--RELED-VQLAVEDEKTKERKVQSRPKA 492
Query: 528 LDRSAFENMQHGKHQDHSEEHLHLVKPSHEADLSAVEEGEVSALDDIDLGPKSSNQKRKV 587
+ S +HG+ D + ++ EEGE + + ++ P ++KRK+
Sbjct: 493 -ENSDLMGTEHGEILD------------VKGEVKNTEEGE---MVNNNVSPMMHSRKRKM 536
Query: 588 ESSPDNFVEGKKRHNYGSGSTHHNRIDYIEDRNKVNRLGHAERDSKRHIQEN 639
S P+ EGK+RHN +G H + H +R+ +RH QEN
Sbjct: 537 GSPPEKQSEGKRRHNSENGEESH--------KTSRGSSHHGDREHRRHSQEN 580
>dbj|BAC42172.1| unknown protein [Arabidopsis thaliana] gi|30684822|ref|NP_193695.2|
cyclin family protein [Arabidopsis thaliana]
Length = 541
Score = 519 bits (1336), Expect = e-145
Identities = 322/647 (49%), Positives = 405/647 (61%), Gaps = 116/647 (17%)
Query: 1 MAGLLLGDISHHGSYQSGSQGGSQDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLR 60
MAG+L GD S S S S + Q+ +RWYF RKEIEENSPS+ D +DLKKE YLR
Sbjct: 1 MAGVLAGDCSFGESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLR 60
Query: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETP 120
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF+RQSHA+NDRR IATVCMFLAGKVEETP
Sbjct: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETP 120
Query: 121 RPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYK 180
RPLKDVI+VSYEIIHKKDP Q+IKQK+VYEQQKELIL GE++VL+TLGFD NV+HPYK
Sbjct: 121 RPLKDVIVVSYEIIHKKDPTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYK 180
Query: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD
Sbjct: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
Query: 241 GEKVWWQEFDVTPRQLEEVSNQMLELYEQNRM--AQSNDVEGTTGGGNRATPKAPTSNDE 298
GEKVWWQEFDVTPRQLE+VSNQMLELYEQNR+ +Q ++VE + GGG+
Sbjct: 241 GEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQVSEVESSVGGGSAH---------- 290
Query: 299 AASTNRNLHIGGPSSTLETSKPATSKNVFVSSANHVGRPVSN-HGVSGS--TEVKHPVED 355
H+G S T + + S N+ S+ R N G +GS TE K +
Sbjct: 291 --------HVGSRPSARLTHEHSNSDNLGGSTKATQNRSNDNGSGEAGSVITEQKGERDT 342
Query: 356 DVKGNLHPKQEPSAYEENMQEAQDMVRSRSGYAKGNQHPKQEPSTYEEKMQEAQDMVRSR 415
+ K ++H + P+ +SRSG + P E+K+++A
Sbjct: 343 ETKDSMHTESHPAH------------KSRSGV--------EAPG--EDKIEKA------G 374
Query: 416 SGYGKEQESNVGRSNIKEEDVELNDKHSSKNLNHRDATFASPNLEGIKKIDRDKVKAALE 475
+ + ++ +S + + DV ++ S K++ K+ RDKVKA LE
Sbjct: 375 AHFPEDDKSRI----VGTADVTVS--QSPKDI----------------KMFRDKVKAKLE 412
Query: 476 KRKKATGNISKKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKSLDRSAFEN 535
KK G ++K +LVD++DLIE RELED +ELA + +K+ Q+ +
Sbjct: 413 -AKKVQGEKTRKKDLVDEDDLIE--RELED-VELAVEDDKDIQN-----------KSSMG 457
Query: 536 MQHGKHQDHSEEHLHLVKPSHEADLSAVEEGEVSALDDIDLGPKSSNQKRKVESSPDNFV 595
+HG+ D + ++ EEGE+ +DD+ ++KRK+ES +
Sbjct: 458 TEHGEILDGNNLVVN------------TEEGEM--IDDV--SSTMPSRKRKMESPCEK-- 499
Query: 596 EGKKRHNYGSGSTHHNRIDYIEDRNKVNRLG----HAERDSKRHIQE 638
G G H+ + +E+ K N G + +R+ +RH QE
Sbjct: 500 ------QLGEGKRRHDNSENVEEGQKTNPGGSSHSYGDREPRRHSQE 540
>gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa (japonica
cultivar-group)]
Length = 490
Score = 494 bits (1272), Expect = e-138
Identities = 295/559 (52%), Positives = 355/559 (62%), Gaps = 84/559 (15%)
Query: 1 MAGLLLGDISHHGSYQSGSQGGSQDNQ----EYGSRWYFSRKEIEENSPSKQDGVDLKKE 56
M G+ D SHHG ++ D + G+ WYFSRKEIEENS S++DG+DLKKE
Sbjct: 1 MDGIQTSDSSHHGIVENSPYRTPYDRYAEGGQLGASWYFSRKEIEENSLSRRDGIDLKKE 60
Query: 57 AYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKV 116
+YLRKSYCTFLQDLGMRLKVPQVTIATAI+FCHRFFLRQSHAKNDRR IATVCMFLAGKV
Sbjct: 61 SYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKV 120
Query: 117 EETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVH 176
EETPRPLKDVIL+SYEIIHKKD AAVQRIKQK+VYEQQKELILLGERVVL TLGFDLNVH
Sbjct: 121 EETPRPLKDVILISYEIIHKKDAAAVQRIKQKEVYEQQKELILLGERVVLVTLGFDLNVH 180
Query: 177 HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVK 236
HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVK
Sbjct: 181 HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVK 240
Query: 237 LPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRMA----QSNDVEGTTGG--GNRATP 290
LPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNR+A Q ND EG++ RA+
Sbjct: 241 LPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVAPPPSQGNDTEGSSASVVNQRASG 300
Query: 291 KAPTSNDEAASTNRNLHIGGPSSTLETSKPATSKNVFVSSANHVGRPVSNHGVSGSTEVK 350
KAP S++E P T + NH+ S+ G
Sbjct: 301 KAPGSSEE---------------------PPTHE-------NHLAPRQSS--TPGHQGYD 330
Query: 351 HPVEDDVKGNLHPKQEPSAYEENMQEAQDMVRSRSGYAKGNQHPKQEPSTYEEKMQEAQD 410
HP HP+++ S+ +A+D G A N+ P ST + + +D
Sbjct: 331 HP---------HPEKQNSSQRVPQNDARD------GTANSNEGPNMS-STMDAMKKIDKD 374
Query: 411 MVRSRSGYGKEQESNVGRSNIKEEDVELNDKHSSKNLNHRDATFASPNLEGIKKIDRDKV 470
V++ ++ + +V K+ D+ +D + L H G++ D+
Sbjct: 375 KVKAALEKRRKSKGDVA----KKVDIMDDDDLIERELEH-----------GVELAAEDE- 418
Query: 471 KAALEKRKKATGNISKKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKSLDR 530
K E+R+ + + +D + R+ E + EL+ S++ + S LD
Sbjct: 419 KIKHERRQSWPHSAHR-----EDHQGVARLTENTEEGELSIDSQEYR-------SPELDN 466
Query: 531 SAFENMQHGKHQDHSEEHL 549
++M ++ D E L
Sbjct: 467 RKRKDMHEHRNYDRGERDL 485
Score = 101 bits (252), Expect = 7e-20
Identities = 75/234 (32%), Positives = 111/234 (47%), Gaps = 31/234 (13%)
Query: 367 PSAYEENMQEAQDMVRSR-SGYAKGNQHPKQEPSTYEEKMQEAQDMVRSRSGYGKEQESN 425
PS + + +V R SG A G+ +EP T+E + Q GY
Sbjct: 280 PSQGNDTEGSSASVVNQRASGKAPGSS---EEPPTHENHLAPRQSSTPGHQGYDHPHPEK 336
Query: 426 VGRSNIKEEDVELNDKHSSKNLNHRDATFASPNLEGIKKIDRDKVKAALEKRKKATGNIS 485
S + V ND N + S ++ +KKID+DKVKAALEKR+K+ G+++
Sbjct: 337 QNSS----QRVPQNDARDG-TANSNEGPNMSSTMDAMKKIDKDKVKAALEKRRKSKGDVA 391
Query: 486 KKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKSLDRSAFENMQHGKHQDHS 545
KK +++DD+DLIE RELE G+ELAA+ EK K + R+S H H
Sbjct: 392 KKVDIMDDDDLIE--RELEHGVELAAEDEKIKHERRQS---------------WPHSAHR 434
Query: 546 EEHLHLVKPSHEADLSAVEEGEVSALDDIDLGPKSSNQKRKVESSPDNFVEGKK 599
E+H + + + EEGE+S P+ N+KRK N+ G++
Sbjct: 435 EDHQGVARLTEN-----TEEGELSIDSQEYRSPELDNRKRKDMHEHRNYDRGER 483
>emb|CAB78962.1| putative protein [Arabidopsis thaliana] gi|4582488|emb|CAB40377.1|
putative protein [Arabidopsis thaliana]
gi|7486085|pir||T06153 hypothetical protein F24J7.161 -
Arabidopsis thaliana
Length = 533
Score = 457 bits (1175), Expect = e-127
Identities = 299/647 (46%), Positives = 384/647 (59%), Gaps = 124/647 (19%)
Query: 1 MAGLLLGDISHHGSYQSGSQGGSQDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLR 60
MAG+L GD S S S S + Q+ +RWYF RKEIEENSPS+ D +DLKKE YLR
Sbjct: 1 MAGVLAGDCSFGESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLR 60
Query: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETP 120
KSYCTFLQDLGMRLKV + + + L Q+ IATVCMFLAGKVEETP
Sbjct: 61 KSYCTFLQDLGMRLKVTVLRLLLSPFSMLSSLLTQT--------IATVCMFLAGKVEETP 112
Query: 121 RPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYK 180
RPLKDVI+VSYEIIHKKDP Q+IKQK+VYEQQKELIL GE++VL+TLGFD NV+HPYK
Sbjct: 113 RPLKDVIVVSYEIIHKKDPTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYK 172
Query: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD
Sbjct: 173 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 232
Query: 241 GEKVWWQEFDVTPRQLEEVSNQMLELYEQNRM--AQSNDVEGTTGGGNRATPKAPTSNDE 298
GEKVWWQEFDVTPRQLE+VSNQMLELYEQNR+ +Q ++VE + GGG+
Sbjct: 233 GEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQVSEVESSVGGGSAH---------- 282
Query: 299 AASTNRNLHIGGPSSTLETSKPATSKNVFVSSANHVGRPVSN-HGVSGS--TEVKHPVED 355
H+G S T + + S N+ S+ R N G +GS TE K +
Sbjct: 283 --------HVGSRPSARLTHEHSNSDNLGGSTKATQNRSNDNGSGEAGSVITEQKGERDT 334
Query: 356 DVKGNLHPKQEPSAYEENMQEAQDMVRSRSGYAKGNQHPKQEPSTYEEKMQEAQDMVRSR 415
+ K ++H + P+ +SRSG + P E+K+++A
Sbjct: 335 ETKDSMHTESHPAH------------KSRSGV--------EAPG--EDKIEKA------G 366
Query: 416 SGYGKEQESNVGRSNIKEEDVELNDKHSSKNLNHRDATFASPNLEGIKKIDRDKVKAALE 475
+ + ++ +S + + DV ++ S K++ K+ RDKVKA LE
Sbjct: 367 AHFPEDDKSRI----VGTADVTVS--QSPKDI----------------KMFRDKVKAKLE 404
Query: 476 KRKKATGNISKKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKSLDRSAFEN 535
KK G ++K +LVD++DLIE RELED +ELA + +K+ Q+ +
Sbjct: 405 -AKKVQGEKTRKKDLVDEDDLIE--RELED-VELAVEDDKDIQN-----------KSSMG 449
Query: 536 MQHGKHQDHSEEHLHLVKPSHEADLSAVEEGEVSALDDIDLGPKSSNQKRKVESSPDNFV 595
+HG+ D + ++ EEGE+ +DD+ ++KRK+ES +
Sbjct: 450 TEHGEILDGNNLVVN------------TEEGEM--IDDV--SSTMPSRKRKMESPCEK-- 491
Query: 596 EGKKRHNYGSGSTHHNRIDYIEDRNKVNRLG----HAERDSKRHIQE 638
G G H+ + +E+ K N G + +R+ +RH QE
Sbjct: 492 ------QLGEGKRRHDNSENVEEGQKTNPGGSSHSYGDREPRRHSQE 532
>gb|AAX92938.1| Cyclin, N-terminal domain, putative [Oryza sativa (japonica
cultivar-group)]
Length = 220
Score = 346 bits (888), Expect = 1e-93
Identities = 173/211 (81%), Positives = 185/211 (86%), Gaps = 4/211 (1%)
Query: 1 MAGLLLGDISHHGSYQSGSQGGSQDNQ----EYGSRWYFSRKEIEENSPSKQDGVDLKKE 56
M G+ D SHHG ++ D + G+ WYFSRKEIEENS S++DG+DLKKE
Sbjct: 1 MDGIQTSDSSHHGIVENSPYRTPYDRYAEGGQLGASWYFSRKEIEENSLSRRDGIDLKKE 60
Query: 57 AYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKV 116
+YLRKSYCTFLQDLGMRLKVPQVTIATAI+FCHRFFLRQSHAKNDRR IATVCMFLAGKV
Sbjct: 61 SYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKV 120
Query: 117 EETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVH 176
EETPRPLKDVIL+SYEIIHKKD AAVQRIKQK+VYEQQKELILLGERVVL TLGFDLNVH
Sbjct: 121 EETPRPLKDVILISYEIIHKKDAAAVQRIKQKEVYEQQKELILLGERVVLVTLGFDLNVH 180
Query: 177 HPYKPLVEAIKKFKVAQNALAQVAWNFVNDG 207
HPYKPLVEAIKKFKVAQNALAQVAWNFVNDG
Sbjct: 181 HPYKPLVEAIKKFKVAQNALAQVAWNFVNDG 211
>dbj|BAD94242.1| putative protein [Arabidopsis thaliana] gi|62320075|dbj|BAD94239.1|
putative protein [Arabidopsis thaliana]
Length = 460
Score = 337 bits (864), Expect = 7e-91
Identities = 198/379 (52%), Positives = 251/379 (65%), Gaps = 23/379 (6%)
Query: 13 GSYQSGSQGGSQDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGM 72
GS S S + + W+FSR+EIE NSPS++DG+DLK E LR SYCTFL+ LG
Sbjct: 11 GSESDASSVASNLHDDEIIPWFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGE 70
Query: 73 RLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYE 132
RLKVPQVTIATAI FCHRFFLRQSHAKNDR+ IATVCM LAGKVEETP L+DVI+ SYE
Sbjct: 71 RLKVPQVTIATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYE 130
Query: 133 IIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKV- 191
IHKKD A QR K+VY+QQKEL+L+GE +VL+TL FDL + HPYKPLVEAIKK+ V
Sbjct: 131 RIHKKDLAGAQR---KEVYDQQKELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVE 187
Query: 192 -AQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFD 250
A+ LAQ AWNFVND LRT+LCLQ++PHHIAAGAI LAA+ V L S E V QEFD
Sbjct: 188 DAKTQLAQFAWNFVNDCLRTTLCLQYQPHHIAAGAILLAAELPTVDLQSYRE-VLCQEFD 246
Query: 251 VTPRQLEEVSNQMLELYEQNRMAQSNDVEGTTG---------GGNRATPKAPTSNDEAAS 301
+TP QLE++ Q+LELYE+ +Q + VE + G +T K P+S+ E S
Sbjct: 247 ITPCQLEDIRGQILELYERIPTSQESKVESSGGVAVVHQPISRDMASTEKCPSSDIEGGS 306
Query: 302 TNRNLHIGGPSSTLETSKPATSKNV-FVSSANHVGRPVSNHGVSGSTEVKHPVEDDVKGN 360
+ NL S + S+ S+ + V+S + + + +H V K DDV G
Sbjct: 307 SQVNLSHSDDHSVHDGSR---SEGIGEVNSESEAQKNLQDHSVGNIMVEK---SDDV-GV 359
Query: 361 LHPKQEPSAYEENMQEAQD 379
+ K++ ++E ++ Q+
Sbjct: 360 VQLKKDLQLHQEEVESKQE 378
>ref|XP_465361.1| cyclin K-like [Oryza sativa (japonica cultivar-group)]
gi|46805809|dbj|BAD17159.1| cyclin K-like [Oryza sativa
(japonica cultivar-group)]
Length = 630
Score = 297 bits (760), Expect = 8e-79
Identities = 156/341 (45%), Positives = 220/341 (63%), Gaps = 20/341 (5%)
Query: 18 GSQGGSQDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVP 77
G S+ + E+ WYF+R+E+E+ SPS++DG+ E+ +R+ YC+F++D+G+RLK+P
Sbjct: 3 GESQTSKLSCEHMYSWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLP 62
Query: 78 QVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKK 137
Q+TIATAI+FCHRF+L QS AKN + IATVC+FLA KVE+TP PL VI V+Y ++++
Sbjct: 63 QMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRR 122
Query: 138 DPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALA 197
DPA +RI QKDV+E+QK LIL GER+VL T+ FD N+ HPY+PL++A++K ++Q +
Sbjct: 123 DPATARRIHQKDVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQKEVK 182
Query: 198 QVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLE 257
QVAWNFVND L+T+LCLQ+KP +IAAG+++LAAKF VKLP G VWW +FDV P+ LE
Sbjct: 183 QVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDVAPKPLE 242
Query: 258 EVSNQMLELYEQNRMAQSNDVEGTTGGGNRATPKAPTSNDEAASTNRNLHIGGPSSTLET 317
V QM E+ ++ +P E L P S L
Sbjct: 243 AVLQQMREMVHMKAKLFAH--------------PSPAKQKEVLFEGMLLISNSPDSVLTQ 288
Query: 318 SKPATSKNVFVSSANHVGRPVSNHGVSGSTEVKHPVEDDVK 358
S + S SS+ +G P + V S ++ H +ED K
Sbjct: 289 SSLSVS-----SSSPEIGDPNDHLQVDSSQDIVH-IEDRSK 323
>ref|XP_464024.1| cyclin T2-like protein [Oryza sativa (japonica cultivar-group)]
gi|41052605|dbj|BAD07997.1| cyclin T2-like protein
[Oryza sativa (japonica cultivar-group)]
Length = 446
Score = 291 bits (744), Expect = 6e-77
Identities = 136/235 (57%), Positives = 186/235 (78%), Gaps = 1/235 (0%)
Query: 33 WYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF 92
WY +R E+E SPS++DGV KEA LR +YC+F++D+G+RL++PQVTIATA + CHRF+
Sbjct: 9 WYVTRDEVERGSPSRRDGVGAAKEAELRATYCSFIRDVGLRLQLPQVTIATATLLCHRFY 68
Query: 93 LRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYE 152
LRQSHAKN+ + +ATVC+FLA K+E+TP PL+ VI+V+YE +++KD A RI QK+V E
Sbjct: 69 LRQSHAKNEWQTVATVCVFLASKIEDTPCPLQRVIIVAYETMYRKDCNAAHRIYQKEVLE 128
Query: 153 QQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSL 212
+QKELIL+GE ++L+T+ FD N+ HPY+PL A+KK + Q + QVA N +ND +RT+L
Sbjct: 129 KQKELILVGETLLLSTIRFDFNIQHPYEPLKLALKKLGIFQMEVKQVAVNLINDAIRTTL 188
Query: 213 CLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELY 267
+QFKPH+IAAG+++LAAKF +LPSDG KVWW EFDV P+QL+ V QM EL+
Sbjct: 189 VVQFKPHYIAAGSLYLAAKFNNFRLPSDG-KVWWHEFDVAPKQLQAVIQQMTELF 242
>emb|CAB78958.1| putative protein [Arabidopsis thaliana] gi|2853083|emb|CAA16933.1|
putative protein [Arabidopsis thaliana]
gi|15235087|ref|NP_193691.1| cyclin family protein
[Arabidopsis thaliana] gi|7486081|pir||T06149
hypothetical protein F24J7.120 - Arabidopsis thaliana
Length = 474
Score = 264 bits (674), Expect = 8e-69
Identities = 177/397 (44%), Positives = 230/397 (57%), Gaps = 45/397 (11%)
Query: 13 GSYQSGSQGGSQDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGM 72
GS S S + + W+FSR+EIE NSPS++DG+DLK E LR SYCTFL+ LG
Sbjct: 11 GSESDASSVASNLHDDEIIPWFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGE 70
Query: 73 RLKVPQVTIATAIIFCHR-----FFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVI 127
RLK+ C R FF S IATVCM LAGKVEETP L+DVI
Sbjct: 71 RLKMSLPDFIHDKTVCDRDQALCFFPFGSMCMT----IATVCMLLAGKVEETPVTLEDVI 126
Query: 128 LVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIK 187
+ SYE IHKKD A QR K+VY+QQKEL+L+GE +VL+TL FDL + HPYKPLVEAIK
Sbjct: 127 IASYERIHKKDLAGAQR---KEVYDQQKELVLIGEELVLSTLNFDLCISHPYKPLVEAIK 183
Query: 188 KFKV--AQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVW 245
K+ V A+ LAQ AWNFVND LRT+LCLQ++PHHIAAGAI LAA+ V L S E V
Sbjct: 184 KYMVEDAKTQLAQFAWNFVNDCLRTTLCLQYQPHHIAAGAILLAAELPTVDLQSYRE-VL 242
Query: 246 WQEFDVTPRQLE-------------EVSNQMLELYEQNRMAQSNDVEGTTG--------- 283
QEFD+TP QLE ++ Q+LELYE+ +Q + VE + G
Sbjct: 243 CQEFDITPCQLEDLVDVVNLSFAFSDIRGQILELYERIPTSQESKVESSGGVAVVHQPIS 302
Query: 284 GGNRATPKAPTSNDEAASTNRNLHIGGPSSTLETSKPATSKNV-FVSSANHVGRPVSNHG 342
+T K P+S+ E S+ NL S + S+ S+ + V+S + + + +H
Sbjct: 303 RDMASTEKCPSSDIEGGSSQVNLSQSDDHSVHDGSR---SEGIGEVNSESEAQKNLQDHS 359
Query: 343 VSGSTEVKHPVEDDVKGNLHPKQEPSAYEENMQEAQD 379
V K DDV G + K++ ++E ++ Q+
Sbjct: 360 VGNIMVEK---SDDV-GVVQLKKDLQLHQEEVESKQE 392
>ref|NP_174775.1| cyclin family protein [Arabidopsis thaliana]
gi|12324285|gb|AAG52114.1| hypothetical protein;
32762-33505 [Arabidopsis thaliana]
gi|25366902|pir||E86475 hypothetical protein F12A4.13 -
Arabidopsis thaliana
Length = 247
Score = 252 bits (643), Expect = 3e-65
Identities = 123/240 (51%), Positives = 169/240 (70%), Gaps = 9/240 (3%)
Query: 33 WYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF 92
WY +R+ IE+ SPS+ DG++LK+E + R SY +FLQ+LG RL PQ TIATAI+ C RFF
Sbjct: 7 WYNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFF 66
Query: 93 LRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYE 152
RQS KND + +A +CMF+AGKVE +PRP DV+ VSY ++ K+P +DV+E
Sbjct: 67 TRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPL-------RDVFE 119
Query: 153 QQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNA--LAQVAWNFVNDGLRT 210
+ K +L GE++VL+TL DL + HPYK +++ +K+ ++ L Q A+NFVND LRT
Sbjct: 120 RLKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKTEDGRRLCQAAFNFVNDSLRT 179
Query: 211 SLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQN 270
SLCLQF P IA+ AI++ K+ LP DG+K WW+EFDVT RQL E+ +QML+LY Q+
Sbjct: 180 SLCLQFGPSQIASAAIYIGLSMCKMTLPCDGDKAWWREFDVTKRQLWEICDQMLDLYVQD 239
>gb|AAK06874.1| putative cyclin [Arabidopsis thaliana] gi|26450460|dbj|BAC42344.1|
putative cyclin [Arabidopsis thaliana]
gi|15217663|ref|NP_174084.1| cyclin family protein
[Arabidopsis thaliana] gi|5668773|gb|AAD46000.1|
Contains similarity to gb|AF113001 silencing mediator of
retinoic acid and thyroid hormone receptor alpha and
gb|AF109179 cyclin T1 from Mus musculus. ESTs
gb|N95317, gb|Z29139 and gb|Z30853 come from this gene.
[Arabidopsis thaliana]
Length = 317
Score = 249 bits (635), Expect = 3e-64
Identities = 127/241 (52%), Positives = 169/241 (69%), Gaps = 3/241 (1%)
Query: 31 SRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHR 90
S+WYFSR+EIE SPS++DG+DL KE++LR SYCTFLQ LGM+L V QVTI+ A++ CHR
Sbjct: 32 SKWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHR 91
Query: 91 FFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDV 150
F++RQSHAKND + IAT +FLA K E+ P L V++ SYEII++ DP+A RI Q +
Sbjct: 92 FYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTEC 151
Query: 151 YEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRT 210
Y + KE+IL GE ++L+T F L++ PYKPL A+ + A LA AWNFV+D +RT
Sbjct: 152 YHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLN-AWPDLATAAWNFVHDWIRT 210
Query: 211 SLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQN 270
+LCLQ+KPH IA + LAA F K+ S + WW EF VT + L+EV +M L E +
Sbjct: 211 TLCLQYKPHVIATATVHLAATFQNAKVGS--RRDWWLEFGVTTKLLKEVIQEMCTLIEVD 268
Query: 271 R 271
R
Sbjct: 269 R 269
>gb|AAM67327.1| putative cyclin [Arabidopsis thaliana]
Length = 317
Score = 249 bits (635), Expect = 3e-64
Identities = 127/241 (52%), Positives = 169/241 (69%), Gaps = 3/241 (1%)
Query: 31 SRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHR 90
S+WYFSR+EIE SPS++DG+DL KE++LR SYCTFLQ LGM+L V QVTI+ A++ CHR
Sbjct: 32 SKWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHR 91
Query: 91 FFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDV 150
F++RQSHAKND + IAT +FLA K E+ P L V++ SYEII++ DP+A RI Q +
Sbjct: 92 FYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTEC 151
Query: 151 YEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRT 210
Y + KE+IL GE ++L+T F L++ PYKPL A+ + A LA AWNFV+D +RT
Sbjct: 152 YHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLN-AWPDLATAAWNFVHDWIRT 210
Query: 211 SLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQN 270
+LCLQ+KPH IA + LAA F K+ S + WW EF VT + L+EV +M L E +
Sbjct: 211 TLCLQYKPHVIATATVHLAATFQNAKVGS--RRDWWLEFGVTTKLLKEVIQEMCTLIEVD 268
Query: 271 R 271
R
Sbjct: 269 R 269
>gb|AAR01224.1| cyclin T1 [Medicago truncatula]
Length = 372
Score = 238 bits (607), Expect = 4e-61
Identities = 117/234 (50%), Positives = 165/234 (70%), Gaps = 2/234 (0%)
Query: 34 YFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFL 93
+ SR +I+ NSPS++DG+D+ E +LR SYC FLQ+LG RL++PQ TI T+++ CHRFF+
Sbjct: 141 FMSRDDIDRNSPSRKDGIDVLHETHLRYSYCAFLQNLGTRLEMPQTTIGTSMVLCHRFFV 200
Query: 94 RQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQ 153
R+SHA +DR +IAT +FLAGK EE+P PL V+ S E++HK+D A + D +EQ
Sbjct: 201 RRSHACHDRFLIATAALFLAGKSEESPCPLNSVLRTSSELLHKQDFAFLSYWFPVDWFEQ 260
Query: 154 QKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLC 213
+E +L E+++L TL F+L V HPY PL + K +++ L +A N V++GLR+SL
Sbjct: 261 YRERVLEAEQLILTTLNFELGVQHPYAPLTSVLNKLGLSKTVLVNMALNLVSEGLRSSLW 320
Query: 214 LQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELY 267
LQFKPH IAAGA +LAAKFL + L + K WQEF TP L++VS Q++EL+
Sbjct: 321 LQFKPHQIAAGAAYLAAKFLNMDLAA--YKNIWQEFQATPSVLQDVSQQLMELF 372
>ref|XP_637571.1| hypothetical protein DDB0187046 [Dictyostelium discoideum]
gi|60465997|gb|EAL64064.1| hypothetical protein
DDB0187046 [Dictyostelium discoideum]
Length = 405
Score = 215 bits (547), Expect = 4e-54
Identities = 120/336 (35%), Positives = 195/336 (57%), Gaps = 14/336 (4%)
Query: 26 NQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAI 85
N + S W+FS++++ ++ G++LK E R++ F+QD+G++LK+PQ+TIATAI
Sbjct: 2 NYKSNSHWFFSKEQVLKHYSL---GIELKLEVAYRRASAAFIQDVGIKLKMPQLTIATAI 58
Query: 86 IFCHRFFLRQSHAKNDR--------RIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKK 137
+ HRFF+R +DR ++AT C+FLAGKVEETPR L DVI VSY I +KK
Sbjct: 59 SYFHRFFIRHQLKDHDRFVCINIDSPVVATACLFLAGKVEETPRKLDDVIKVSYMIKNKK 118
Query: 138 -DPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNAL 196
D + I Q++ + K IL E ++L T+ F+L V HPYK L+E +K + ++N L
Sbjct: 119 KDGDKMVAISQQE-HNNLKNKILQNEHLILTTIAFELAVEHPYKYLLEYMKSIQGSKN-L 176
Query: 197 AQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQL 256
QVAWNFVND LRTSLCL + P I+ +I+LA +FL +L ++ +K WW+ + L
Sbjct: 177 CQVAWNFVNDSLRTSLCLHYPPDLISYASIYLATRFLNYQLITENKKEWWEMLGIKFEVL 236
Query: 257 EEVSNQMLELYEQNRMAQSNDVEGTTGGGNRATPKAPTSNDEAASTNRNLHIGGPSSTLE 316
E++S Q+L+LYE N + Q+ + ++ +T +++ + + ++ + +
Sbjct: 237 EDISKQILDLYEANPLQQTATIPSSSSSTPTSTSTTTSTSSPSPNPSQPQPLPPQQNENS 296
Query: 317 TSKPATSKNVFVSSANHVGRPVSNHGVSGSTEVKHP 352
+ ++ N +S + ++ S S K P
Sbjct: 297 NNSNNSNNNTTTTSTSTSSNTITTTSTSSSANEKQP 332
>gb|AAH44435.1| Wu:fi75b02 protein [Danio rerio]
Length = 679
Score = 173 bits (439), Expect = 1e-41
Identities = 152/585 (25%), Positives = 267/585 (44%), Gaps = 63/585 (10%)
Query: 23 SQDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIA 82
SQ+N ++WYF+R++IE NSPS++ G+D KE R+ LQD+G RL V Q+TI
Sbjct: 14 SQNN----NKWYFTREQIE-NSPSRRAGLDPDKELLYRQQAANLLQDMGQRLNVSQLTIN 68
Query: 83 TAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAV 142
TAI++ HRF++ QS + R +IA +FLA KVEE PR L+ VI V++ ++ +DP+
Sbjct: 69 TAIVYMHRFYMVQSFTRFHRNVIAPAALFLAAKVEEQPRKLEHVIKVTHACLNPQDPSPD 128
Query: 143 QRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWN 202
R D Y QQ + +++ E ++L TLGF++ + HP+ +V+ + + +++ LAQ ++
Sbjct: 129 TR---SDTYLQQAQDLVILESIILQTLGFEITIDHPHTHVVKCTQLVRASKD-LAQTSYF 184
Query: 203 FVNDGLR-TSLCLQFKPHHIAAGAIFLAAKFLKVKLP-SDGEKVWWQEFD--VTPRQLEE 258
+ L T+ CLQ+ P +A I LA K+ ++P S K WWQ D VT L+E
Sbjct: 185 MATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWQYVDPTVTLELLDE 244
Query: 259 VSNQMLELYEQNRMAQSNDVEGTTGGGNRATPKAPTSNDEAASTNRNLHIGGPSSTL--- 315
++++ L++ E+ ++ G A D++ + + + STL
Sbjct: 245 LTHEFLQILEKT-PSRLKRTRNWKAAGQTAKKSKVQDGDQSEAIMNMISMSSSDSTLAGL 303
Query: 316 -ETSKPATSKNVFVSSANHVGRPVSNHGVSGSTEVKHPVEDDVKGNLHPKQEPSAYEENM 374
S P T ++ + H + H S K++P+A E +
Sbjct: 304 TSLSAPPTGSSMDSCADEHSAAASAQHWQPPS-----------------KEQPTANELHA 346
Query: 375 QEAQDMVRSRSGYAKGNQHPKQEPSTYEEKMQEAQDMVRSRSGYGKEQESNVGRSNIKEE 434
+ R+ +A K+E E +++ GY ++ + + +++
Sbjct: 347 PAKVSLSEYRAKHADELAAQKRELKNMEASVKQ---------GYATAAQALMNQQ--RKD 395
Query: 435 DVELNDKHSSKNLNHRDATFASPNLEGIKKIDRDKVKAALEKRKKATG---NISKKTELV 491
+ + SS + N+ L+ ++ +R +K L ++ G + S +
Sbjct: 396 KHHHHQQTSSSDTNNPSPIVLKIPLD--ERSERSSIKMRLPVPGQSGGGHSHSSGSSSRG 453
Query: 492 DDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKSLDRSAFENMQHGKHQDHSEEHLHL 551
D+D+ R+R + + + +DG KS K +RS + H H S
Sbjct: 454 SDQDIKVRIR-------VPDRRGGSGEDG-KSREKHRERSNHHHHHHHHHHHSSSSSAGS 505
Query: 552 VKPSHEADL----SAVEEGEVSALDDIDLGPKSSNQKRKVESSPD 592
+ S + SA G L + SS+ RK PD
Sbjct: 506 LSASSSSSSAQKHSAGSSGSSKKLSGDSVRTSSSSMSRKRTHMPD 550
>gb|AAF24942.1| T22C5.8 [Arabidopsis thaliana]
Length = 232
Score = 172 bits (437), Expect = 2e-41
Identities = 90/187 (48%), Positives = 123/187 (65%), Gaps = 3/187 (1%)
Query: 85 IIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQR 144
++ CHRF++RQSHAKND + IAT +FLA K E+ P L V++ SYEII++ DP+A R
Sbjct: 1 MVMCHRFYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIR 60
Query: 145 IKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFV 204
I Q + Y + KE+IL GE ++L+T F L++ PYKPL A+ + A LA AWNFV
Sbjct: 61 IHQTECYHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLN-AWPDLATAAWNFV 119
Query: 205 NDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQML 264
+D +RT+LCLQ+KPH IA + LAA F K+ S + WW EF VT + L+EV +M
Sbjct: 120 HDWIRTTLCLQYKPHVIATATVHLAATFQNAKVGS--RRDWWLEFGVTTKLLKEVIQEMC 177
Query: 265 ELYEQNR 271
L E +R
Sbjct: 178 TLIEVDR 184
>gb|AAH57477.1| Wu:fi75b02 protein [Danio rerio]
Length = 683
Score = 172 bits (435), Expect = 4e-41
Identities = 152/593 (25%), Positives = 264/593 (43%), Gaps = 79/593 (13%)
Query: 23 SQDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIA 82
SQ+N ++WYF+R++IE NSPS++ G+D KE R+ LQD+G RL V Q+TI
Sbjct: 18 SQNN----NKWYFTREQIE-NSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 72
Query: 83 TAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAV 142
TAI++ HRF++ QS + R +IA +FLA KVEE PR L+ VI V++ ++ +DP+
Sbjct: 73 TAIVYMHRFYMVQSFTRFHRDVIAPAALFLAAKVEEQPRKLEHVIKVTHACLNPQDPSPD 132
Query: 143 QRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWN 202
R D Y QQ + +++ E ++L TLGF++ + HP+ +V+ + + +++ LAQ ++
Sbjct: 133 TR---SDTYLQQAQDLVILESIILQTLGFEITIDHPHTHVVKCTQLVRASKD-LAQTSYF 188
Query: 203 FVNDGLR-TSLCLQFKPHHIAAGAIFLAAKFLKVKLP-SDGEKVWWQEFD--VTPRQLEE 258
+ L T+ CLQ+ P +A I LA K+ ++P S K WWQ D VT L+E
Sbjct: 189 MATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWQYVDPTVTLELLDE 248
Query: 259 VSNQMLELYEQNRMAQSNDVEGTTGGGNRATPKAPTSNDEAASTNRNLHIGGPSSTL--- 315
++++ L++ E+ ++ G A D++ + + + STL
Sbjct: 249 LTHEFLQILEKT-PSRLKRTRNWKAAGQTAKKSKVQDGDQSEAIMNMISMSSSDSTLAGL 307
Query: 316 -ETSKPATSKNVFVSSANHVGRPVSNHGVSGSTEVKHPVEDDVKGNLHPKQEPSAYEENM 374
S P T ++ + H + H S K++P+A E
Sbjct: 308 TSLSAPPTGSSMDSCADEHSAAASAQHWQPPS-----------------KEQPTANE--- 347
Query: 375 QEAQDMVRSRSGYAKGNQHPKQEPSTYEEKMQEAQDMVRSRSGYGKEQESNVGRSNIKEE 434
H + S E + + A ++ + K E++V +
Sbjct: 348 -----------------LHAPAKVSLSEYRAKHADELAAQKREL-KNMEASVKQGYATAA 389
Query: 435 DVELNDKHSSKNLNHRDATFASPN--------LEGIKKIDRDKVKAALEKRKKATG---N 483
+N + K+ +H+ + + N + ++ +R +K L ++ G +
Sbjct: 390 QALMNQQRKDKHHHHQQTSASDTNNPSPIVLKIPLDERSERSSIKMRLPVPGQSGGGHSH 449
Query: 484 ISKKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKSLDRSAFENMQHGKHQD 543
S + D+D+ R+R + + + +DG KS K +RS + H H
Sbjct: 450 SSGSSSRGSDQDIKVRIR-------VPDRRGGSGEDG-KSREKHRERSNHHHHHHHHHHH 501
Query: 544 HSEEHLHLVKPSHEADL----SAVEEGEVSALDDIDLGPKSSNQKRKVESSPD 592
S + S + SA G L + SS+ RK PD
Sbjct: 502 SSSSSAGSLSASSSSSSAQKHSAGSSGSSKKLSGDSVRTSSSSMSRKRTHMPD 554
>gb|AAH44378.1| Cyclin T2 [Danio rerio] gi|41054169|ref|NP_956122.1| cyclin T2
[Danio rerio]
Length = 630
Score = 164 bits (416), Expect = 6e-39
Identities = 161/652 (24%), Positives = 289/652 (43%), Gaps = 85/652 (13%)
Query: 31 SRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHR 90
S+W+F+R+++E +PS++ GV+ +E R+ +QD+G RL V Q+TI TAI++ HR
Sbjct: 9 SKWFFTREQLE-TTPSRRCGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINTAIVYMHR 67
Query: 91 FFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDV 150
F++ S K R II+ +FLA KVEE PR L+ VI V++ ++ ++P + +
Sbjct: 68 FYMYHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQEPPLDTK---SNA 124
Query: 151 YEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLR- 209
Y QQ + +++ E +VL TLGF++ + HP+ +V+ + + +++ LAQ ++ + L
Sbjct: 125 YLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKD-LAQTSYFMATNSLHL 183
Query: 210 TSLCLQFKPHHIAAGAIFLAAKFLKVKLP-SDGEKVWWQEFD--VTPRQLEEVSNQMLEL 266
T+ CLQ KP IA I LA K+ ++P S K WW+ D VT L+E++++ L++
Sbjct: 184 TTFCLQHKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEFLQI 243
Query: 267 YEQ--NRMAQSNDVEGTTGGGNRATPKAPTSNDEAASTNRNLHIGGPSSTLETSKPATSK 324
E+ +R+ + + T K P S+++ + ++ + G S T + S T
Sbjct: 244 LEKTPSRLKRIRNWRATQAA------KKPKSDNQGSDSS---SLAGSSLTQDPSLMDTLP 294
Query: 325 NVFVSSANHVGR---PVSNHGVSGSTEVKHPVEDDVKGNLHPKQEPSAYEENMQEAQDMV 381
V S+A G PV G S S+ + +++G + PS + ++ Q D
Sbjct: 295 GVSTSTAFSKGSTSFPVCLSGNSSSSLSLDSIA-NMQGTSYTYTAPSDWPQD-QLRSDPY 352
Query: 382 RSRSGYAKGNQHP----------------------KQEPSTYEEKMQEAQDMVRSRSGYG 419
+ + + HP K + +TY Q M +
Sbjct: 353 SVKQLPSHSSMHPQRPDKSADLNPTKHEHKVSGGTKHQATTYPPHAAPTQKMSLDKYREK 412
Query: 420 KEQESNVGRSNIKEEDVELNDKHSSKNLNHR-------------DATFASPNLEGIKKID 466
E V + ++++VE ++ +HR T ASP IK
Sbjct: 413 HAAELAVQKRKQEQQNVETEVYGATTQTDHRKHLPHLSHGQQGAGVTTASP--LKIKLPG 470
Query: 467 RDKVKAALEKRKKATGNISKKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSK 526
+DK++ EK + ++ E EL+ I+++++ + +G
Sbjct: 471 QDKIQDKCEKGSSLKLRLPVPSQ---SEKGGSSKEELKMKIKVSSERHSSSDEGAAKSKH 527
Query: 527 SLDRSAFENMQHGKHQDHSEEHLHLVKPSHEADLSAVEEGEVSALDDIDLGPKSSNQKRK 586
S + E +H H H H H +H + EV + GP S++
Sbjct: 528 SSPLVSKE--KHRDHSAHRHHHKHGHSHTHTHSGNGRSSLEVPTTGSVADGPSSASS--- 582
Query: 587 VESSPDNFVEGKKRHNYGSGSTHHNRIDYIEDRNKVNRLGHAERDSKRHIQE 638
+KR N + HH++ +NK ++ G + +H E
Sbjct: 583 ---------SSRKRVNPEASHNHHSK------KNKSSKSGAGGLRTSQHPSE 619
>ref|NP_064321.1| cyclin L1 [Mus musculus] gi|5453421|gb|AAD43568.1| cyclin ania-6a
[Mus musculus]
Length = 531
Score = 162 bits (411), Expect = 2e-38
Identities = 147/514 (28%), Positives = 226/514 (43%), Gaps = 75/514 (14%)
Query: 44 SPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRR 103
+PS QDG+DL E LR C +Q G+ L++PQV +AT + HRFF +S K+
Sbjct: 72 TPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFE 131
Query: 104 IIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGER 163
I+A C+ LA K+EE PR ++DVI V + + + + Y K ++ ER
Sbjct: 132 IVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAER 191
Query: 164 VVLATLGFDLNVHHPYKPLVEAIKKFKVAQN-ALAQVAWNFVNDGLRTSLCLQFKPHHIA 222
VL LGF ++V HP+K +V ++ + +N L Q AWN++ND LRT++ ++F+P IA
Sbjct: 192 RVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIA 251
Query: 223 AGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELY---EQNRMAQSNDVE 279
I+LAA+ L++ LP+ W+ F T +++E+ + L LY + N +VE
Sbjct: 252 CACIYLAARALQIPLPT--RPHWFLLFGTTEEEIQEICIETLRLYTRKKPNYELLEKEVE 309
Query: 280 GTTGGGNRATPKAPTSNDEAASTNRNLHIGGPS--STLETSKPATSKNVFVSSANHVGRP 337
K + EA + L++ G STL PA+ +P
Sbjct: 310 -----------KRKVALQEAKLKAKGLNLDGTPALSTLGGFSPAS-------------KP 345
Query: 338 VSNHGVSGSTEVKHPVEDDVKGNLHPKQEPSAYEENMQE-----AQDMVRSRSGYAKGNQ 392
S V E K PV +VK K+EP ++ + +D RSR+ +
Sbjct: 346 SSPREV--KAEEKSPVSINVK---TVKKEPEDRQQASKSPYNGVRKDSKRSRTSRSASRS 400
Query: 393 HPKQEPSTYEEKMQEAQDMVRSRSG-YGKEQESNVGRSNIKEEDVELNDKHSSKNLNHRD 451
+ + + + RSRSG Y S RS E + H S +L
Sbjct: 401 RSRTRSRSRSHSPRRHYNNRRSRSGTYSSRSRS---RSRSHSESPRRHHNHGSPHLK--- 454
Query: 452 ATFASPNLEGIKKIDRDKVKAALEKRKKATGNISKKTELVDDEDLIERVRELEDGIELAA 511
A E +K +R KRKK+ KT D D+ ++ R
Sbjct: 455 ---AKHTREDLKSSNRHG-----HKRKKSRSRSQSKTR--DHSDVTKKHRH--------- 495
Query: 512 QSEKNKQDGRKSLSKSLDRSAFENMQHGKHQDHS 545
E+ R+ S+S +RS GKH S
Sbjct: 496 --ERGHHRDRRERSRSFERS-----HKGKHHGGS 522
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.129 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,101,543,784
Number of Sequences: 2540612
Number of extensions: 48287880
Number of successful extensions: 151835
Number of sequences better than 10.0: 2565
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 2359
Number of HSP's that attempted gapping in prelim test: 146067
Number of HSP's gapped (non-prelim): 5791
length of query: 641
length of database: 863,360,394
effective HSP length: 134
effective length of query: 507
effective length of database: 522,918,386
effective search space: 265119621702
effective search space used: 265119621702
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0176a.14