BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0175.2
(314 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM65144.1| unknown [Arabidopsis thaliana] gi|21360503|gb|AAM... 174 2e-42
gb|AAD56411.1| bHLH transcription factor GBOF-1 [Tulipa gesneriana] 171 3e-41
gb|AAS88824.2| unknown protein [Oryza sativa (japonica cultivar-... 158 2e-37
dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana] g... 156 6e-37
gb|AAM10957.1| putative bHLH transcription factor [Arabidopsis t... 155 1e-36
gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thalian... 155 1e-36
ref|NP_849863.1| basic helix-loop-helix (bHLH) family protein [A... 154 3e-36
emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa (japonica cultiva... 152 9e-36
gb|AAM10942.1| putative bHLH transcription factor [Arabidopsis t... 152 1e-35
gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana] gi|15221... 152 1e-35
ref|XP_507300.1| PREDICTED OJ1191_A10.109 gene product [Oryza sa... 151 3e-35
dbj|BAD93978.1| bHLH transcription factor like protein [Arabidop... 150 4e-35
ref|NP_172483.3| basic helix-loop-helix (bHLH) family protein [A... 150 4e-35
ref|NP_910691.1| hypothetical protein [Oryza sativa (japonica cu... 150 6e-35
dbj|BAD68029.1| putative TA1 protein [Oryza sativa (japonica cul... 150 6e-35
emb|CAE00874.1| TA1 protein [Oryza sativa (japonica cultivar-gro... 149 8e-35
ref|NP_914823.1| DNA-binding protein-like protein [Oryza sativa ... 149 8e-35
dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa... 149 8e-35
gb|AAS79545.1| putative transcription factor [Arabidopsis thalia... 146 9e-34
gb|AAQ14331.1| MYC1 [Catharanthus roseus] 145 1e-33
>gb|AAM65144.1| unknown [Arabidopsis thaliana] gi|21360503|gb|AAM47367.1|
At5g50917/At5g50917 [Arabidopsis thaliana]
gi|18423212|ref|NP_568745.1| basic helix-loop-helix
(bHLH) family protein [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| basic helix-loop-helix
(bHLH) family protein [Arabidopsis thaliana]
gi|16226850|gb|AAL16280.1| unknown protein [Arabidopsis
thaliana] gi|15982883|gb|AAL09788.1| probable
DNA-binding protein [Arabidopsis thaliana]
Length = 286
Score = 174 bits (442), Expect = 2e-42
Identities = 123/315 (39%), Positives = 170/315 (53%), Gaps = 43/315 (13%)
Query: 1 MAAFSHHHYHPFLVDSTSRFIKMSSLEDELLQP----HINTTT-LHQETSFSVTETSSVD 55
MA FS+ +P SL D LL P IN T+ + Q + + S+V+
Sbjct: 1 MATFSYFQNYPH------------SLLDPLLFPTPHSSINLTSFIDQNHLYPLPNISTVE 48
Query: 56 QSS--KITISDSELS-VEKNQSPETSMVVASMEKKRRSRNGSPLSKDPKGGSKKQKKGNG 112
S + + +E S EK + + S + S S ++ K +K + N
Sbjct: 49 DISFLEYNVDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNN 108
Query: 113 GVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQ 172
KE ++ KK K+ EEP T YIHVRARRGQATDSHSLAERVRREKISERM LQ
Sbjct: 109 S-KEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQN 167
Query: 173 LVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPMLFDMAMDLDNLLVRPEQK 232
LVPGCDKVTGKAL+L+EIINYVQ+LQ QVEFLSMKL S++P+++D DLD L+++ E
Sbjct: 168 LVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSDLDGLILQSE-- 225
Query: 233 VNSLASPPLVLPCVPLCNPNPGTTFADTSTLNPSTS--FPTANHDYLLDYPCSDFLQGQQ 290
+ +P GT+F + P+T+ FP+ + ++ +G++
Sbjct: 226 ---------------MGSPEVGTSFTNAM---PTTTPIFPSLLDNSVVPTHAQVQEEGEE 267
Query: 291 RPNFLCEVRLDNQAF 305
R NF+ +N F
Sbjct: 268 RENFVDRSGFNNNNF 282
>gb|AAD56411.1| bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 171 bits (433), Expect = 3e-41
Identities = 103/227 (45%), Positives = 140/227 (61%), Gaps = 14/227 (6%)
Query: 1 MAAFSH---HHYHPFLVDSTSRFIKMSSLEDELLQPHINTTTLHQETSFSVTETSSVDQS 57
MAAFS+ H L+DST +D + N+T+ + T+S S
Sbjct: 1 MAAFSYKQQQHQSNLLLDSTDHHHLSFQFQDLMT----NSTSPFLYYPMPTSATNSTLDS 56
Query: 58 SKITISDSELSVEKNQSPETSMVVASMEKKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEE 117
+ D SV + QS + K++ +GS ++ G+K++ K K+
Sbjct: 57 ASDNQKDCSSSVAEPQSS------TEIRKRKDKSDGSCMTSVQSKGTKRETKSRKSQKKP 110
Query: 118 DMAK-EEKKDKKKGPEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPG 176
+ +E K++ + EE GYIHVRARRGQATDSHSLAERVRREKISERM +LQ LVPG
Sbjct: 111 KANESDEMKERTQEEEEAPVGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPG 170
Query: 177 CDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPMLFDMAMDLD 223
CDKVTGKA++L+EIINYVQSLQ+QVEFLSMKLA+V+PML++ +D++
Sbjct: 171 CDKVTGKAVMLDEIINYVQSLQNQVEFLSMKLATVSPMLYEFGLDIE 217
>gb|AAS88824.2| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 339
Score = 158 bits (400), Expect = 2e-37
Identities = 85/134 (63%), Positives = 102/134 (75%), Gaps = 12/134 (8%)
Query: 102 GGSKKQKKGNGGVK--EEDMAKE----------EKKDKKKGPEEPSTGYIHVRARRGQAT 149
G S+K K+ N G+K EE A+ +KK K+ EP GYIHVRARRGQAT
Sbjct: 129 GKSRKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAKEAAGGEPPAGYIHVRARRGQAT 188
Query: 150 DSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLA 209
DSHSLAERVRREKISERM MLQ LVPGCDKVTGKAL+L+EII+YVQSLQ+QVEFLSMKLA
Sbjct: 189 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLA 248
Query: 210 SVNPMLFDMAMDLD 223
S++P++++ +D
Sbjct: 249 SLSPLMYEFGPGID 262
>dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis
thaliana] gi|27754625|gb|AAO22758.1| unknown protein
[Arabidopsis thaliana] gi|15239013|ref|NP_199667.1|
basic helix-loop-helix (bHLH) family protein
[Arabidopsis thaliana]
Length = 498
Score = 156 bits (395), Expect = 6e-37
Identities = 91/164 (55%), Positives = 108/164 (65%), Gaps = 16/164 (9%)
Query: 68 SVEKNQSPETSMVVASME---KKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEEDMAKEEK 124
SV K +S E + AS K +NG KGGSK ++ G + E+ EE+
Sbjct: 224 SVPKGKSKENPISTASPSPSFSKTAEKNGG------KGGSKSSEEKGGKRRREEEDDEEE 277
Query: 125 KDKKKG-------PEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGC 177
+ + +G P EP YIHVRARRGQATDSHSLAERVRREKI ERM +LQ LVPGC
Sbjct: 278 EGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGC 337
Query: 178 DKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPMLFDMAMD 221
+KVTGKAL+L+EIINYVQSLQ QVEFLSMKL+SVN D +D
Sbjct: 338 NKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381
>gb|AAM10957.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 155 bits (393), Expect = 1e-36
Identities = 94/164 (57%), Positives = 107/164 (64%), Gaps = 16/164 (9%)
Query: 68 SVEKNQSPETSMVVASME---KKRRSRNGSPLSKDPKGGSK--KQKKGNGGVKEEDMAKE 122
SV K +S E + AS K +NG KGGSK ++K G +EED +E
Sbjct: 224 SVPKGKSKENPISTASPSPSFSKTAEKNGG------KGGSKSSEEKGGKRRREEEDDEEE 277
Query: 123 E-----KKDKKKGPEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGC 177
E K P EP YIHVRARRGQATDSHSLAERVRREKI ERM +LQ LVPGC
Sbjct: 278 EGGGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGC 337
Query: 178 DKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPMLFDMAMD 221
+KVTGKAL+L+EIINYVQSLQ QVEFLSMKL+SVN D +D
Sbjct: 338 NKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381
>gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein
[Arabidopsis thaliana] gi|9293943|dbj|BAB01846.1|
unnamed protein product [Arabidopsis thaliana]
gi|22331295|ref|NP_189011.2| basic helix-loop-helix
(bHLH) family protein [Arabidopsis thaliana]
Length = 371
Score = 155 bits (393), Expect = 1e-36
Identities = 97/204 (47%), Positives = 124/204 (60%), Gaps = 16/204 (7%)
Query: 39 TLHQETSFSVTETSSVDQSSKITISDSEL-----SVEKNQSPETSMVVASMEKKRRSRNG 93
T + S+ + SV T S+S S +SP +S + AS K G
Sbjct: 88 TTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGG 147
Query: 94 SPLSKDPKGGSKKQKKGNGGVK---EEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATD 150
S KGG + ++ G K E+ +K + KD K PE P YIHVRARRGQATD
Sbjct: 148 S------KGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKD-YIHVRARRGQATD 200
Query: 151 SHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLAS 210
SHSLAER RREKISERM +LQ LVPGC+++TGKA++L+EIINYVQSLQ QVEFLSMKLA+
Sbjct: 201 SHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLAT 260
Query: 211 VNP-MLFDMAMDLDNLLVRPEQKV 233
VNP M F+ L +++P + +
Sbjct: 261 VNPRMEFNANASLSTEMIQPGESL 284
>ref|NP_849863.1| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana]
Length = 485
Score = 154 bits (389), Expect = 3e-36
Identities = 91/222 (40%), Positives = 126/222 (55%), Gaps = 12/222 (5%)
Query: 32 QPHINTTTLHQETSFSVTETSSVDQSSKITISDSELSVEKNQSPETSMVVASMEKKRRSR 91
+PH + + +E++ +E + + +S+ S N + ++KR +
Sbjct: 184 EPHNDVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQ 243
Query: 92 NGSPLSKDPKGGSKKQKKGNGGVKEED---------MAKEEKKDKKKGPEEPSTGYIHVR 142
N S+++ NG K D + K+ K+ + P GYIHVR
Sbjct: 244 NSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVR 303
Query: 143 ARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVE 202
ARRGQAT+SHSLAERVRREKISERM LQ LVPGC+KVTGKA++L+EIINYVQSLQ QVE
Sbjct: 304 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 363
Query: 203 FLSMKLASVNPMLFDMAMDLDNLLVRPEQKVNSLASPPLVLP 244
FLSMKLA+VNP M +L+ LL + ++ + +S P
Sbjct: 364 FLSMKLATVNP---QMDFNLEGLLAKDALQLRAGSSSTTPFP 402
>emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa (japonica cultivar-group)]
Length = 263
Score = 152 bits (385), Expect = 9e-36
Identities = 97/222 (43%), Positives = 134/222 (59%), Gaps = 28/222 (12%)
Query: 49 TETSSVDQSSKITISDSELSVEKNQSPETSMVVASMEKKRRSRNGSPLSKDPKGGSKKQK 108
T ++ DQ SK + + + + + P+ S +S+ + N SP G+
Sbjct: 4 TTAAAADQPSKPSAAAAARKRKSSAKPKASS--SSLPTATATTNASPKRSKVAAGA---- 57
Query: 109 KGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMN 168
G+ G + D A+E+ EP+ YIHVRARRGQATDSHSLAERVRRE+ISERM
Sbjct: 58 -GDDGDADADAAEEKP--------EPAKDYIHVRARRGQATDSHSLAERVRRERISERMK 108
Query: 169 MLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPMLFDMAMDLDNLLVR 228
+LQ LVPGC+K+TGKAL+L+EIINYVQSLQ QVEFLSMKLA++NP L D D+ +
Sbjct: 109 LLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQL-----DFDSHYM- 162
Query: 229 PEQKVNSLASPPLVLPCVPLCNPNPGTTFADTSTLNPSTSFP 270
P + ++ + +P P +P T F+ T +P+T+ P
Sbjct: 163 PSKDMSHMP-----VPAYPSSDPTTTTAFSYTG--SPATADP 197
>gb|AAM10942.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 152 bits (384), Expect = 1e-35
Identities = 95/226 (42%), Positives = 128/226 (56%), Gaps = 19/226 (8%)
Query: 32 QPHINTTTLHQETSFSVTETSSVDQSSKITISDSELSVEKNQSPETSMVVASMEKKRRSR 91
+PH + + +E++ +E + + +S+ S N S K+R R
Sbjct: 184 EPHNDVSVAVKESTVRSSEQAEPNVPGSGNVSEDTQSSGGNGQKGRE---TSSNTKKRKR 240
Query: 92 NGSPLSKDPKGGSKKQKK----GNGGVKEED---------MAKEEKKDKKKGPEEPSTGY 138
NG S+ + +Q + NG K D + K+ K+ + P GY
Sbjct: 241 NGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGY 300
Query: 139 IHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQ 198
IHVRARRGQAT+SHSLAERVRREKISERM LQ LVPGC+KVTGKA++L+EIINYVQSLQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 199 HQVEFLSMKLASVNPMLFDMAMDLDNLLVRPEQKVNSLASPPLVLP 244
QVEFLSMKLA+VNP M +L+ LL + ++ + +S P
Sbjct: 361 RQVEFLSMKLATVNP---QMDFNLEGLLAKDALQLRAGSSSTTPFP 403
>gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|15221563|ref|NP_177058.1| basic helix-loop-helix
(bHLH) family protein [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10
[Arabidopsis thaliana] gi|12323211|gb|AAG51583.1|
putative DNA-binding protein [Arabidopsis thaliana]
gi|25404788|pir||G96713 probable DNA-binding protein
T6L1.10 [imported] - Arabidopsis thaliana
Length = 486
Score = 152 bits (384), Expect = 1e-35
Identities = 95/226 (42%), Positives = 128/226 (56%), Gaps = 19/226 (8%)
Query: 32 QPHINTTTLHQETSFSVTETSSVDQSSKITISDSELSVEKNQSPETSMVVASMEKKRRSR 91
+PH + + +E++ +E + + +S+ S N S K+R R
Sbjct: 184 EPHNDVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRE---TSSNTKKRKR 240
Query: 92 NGSPLSKDPKGGSKKQKK----GNGGVKEED---------MAKEEKKDKKKGPEEPSTGY 138
NG S+ + +Q + NG K D + K+ K+ + P GY
Sbjct: 241 NGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGY 300
Query: 139 IHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQ 198
IHVRARRGQAT+SHSLAERVRREKISERM LQ LVPGC+KVTGKA++L+EIINYVQSLQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 199 HQVEFLSMKLASVNPMLFDMAMDLDNLLVRPEQKVNSLASPPLVLP 244
QVEFLSMKLA+VNP M +L+ LL + ++ + +S P
Sbjct: 361 RQVEFLSMKLATVNP---QMDFNLEGLLAKDALQLRAGSSSTTPFP 403
>ref|XP_507300.1| PREDICTED OJ1191_A10.109 gene product [Oryza sativa (japonica
cultivar-group)] gi|50947779|ref|XP_483417.1| bHLH
transcription factor(GBOF-1)-like [Oryza sativa
(japonica cultivar-group)] gi|29647487|dbj|BAC75416.1|
bHLH transcription factor(GBOF-1)-like [Oryza sativa
(japonica cultivar-group)]
Length = 405
Score = 151 bits (381), Expect = 3e-35
Identities = 87/185 (47%), Positives = 111/185 (59%), Gaps = 23/185 (12%)
Query: 50 ETSSVDQSSKITISDSELSVEKNQSPETSMVVASMEKKRRSRNGSPLSKDPKGGSKKQKK 109
E SSV + + D+ + +K +S + A + K P+ ++ + K+ K
Sbjct: 100 EASSVSDPASSAMKDAAANAKKRKSTAAAAAAAKGKGKE-----PPVGEEKESDGKRCKT 154
Query: 110 GNGGVKEEDMAKEEK------------------KDKKKGPEEPSTGYIHVRARRGQATDS 151
GNG + K E+ K K P EP Y+HVRARRGQATDS
Sbjct: 155 GNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVRARRGQATDS 214
Query: 152 HSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASV 211
HSLAERVRRE+IS+RM +LQ LVPGC+KV GKAL+L+EIINYVQSLQ QVEFLSMKLA+V
Sbjct: 215 HSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATV 274
Query: 212 NPMLF 216
NP+ F
Sbjct: 275 NPLDF 279
>dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis
thaliana]
Length = 366
Score = 150 bits (380), Expect = 4e-35
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 23/199 (11%)
Query: 74 SPETSMVVASMEKKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEEDMAKEE-KKDKKKGPE 132
SP + E + + +DP+ G+ + +K + + D +KE K+ + E
Sbjct: 142 SPVGKRRLPEAESQWNKKAVEEFQEDPQRGNDQSQKKH----KNDQSKETVNKESSQSEE 197
Query: 133 EPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIIN 192
P YIH+RARRGQAT+SHSLAERVRREKISERM +LQ+LVPGC+K+TGKA++L+EIIN
Sbjct: 198 APKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 257
Query: 193 YVQSLQHQVEFLSMKLASVNPMLFDMAMDLDNLLVR----------PEQKVNSLAS---- 238
YVQSLQ QVEFLSMKLA+VNP ++ +D+D +L + P +N A
Sbjct: 258 YVQSLQQQVEFLSMKLATVNP---EINIDIDRILAKDLLQSRDRNTPTLGLNPFAGFQGN 314
Query: 239 -PPLVLPCVPLCNPNPGTT 256
P L P NP P TT
Sbjct: 315 IPNLSATTNPQYNPLPQTT 333
>ref|NP_172483.3| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana]
Length = 301
Score = 150 bits (380), Expect = 4e-35
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 23/199 (11%)
Query: 74 SPETSMVVASMEKKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEEDMAKEE-KKDKKKGPE 132
SP + E + + +DP+ G+ + +K + + D +KE K+ + E
Sbjct: 77 SPVGKRRLPEAESQWNKKAVEEFQEDPQRGNDQSQKKH----KNDQSKETVNKESSQSEE 132
Query: 133 EPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIIN 192
P YIH+RARRGQAT+SHSLAERVRREKISERM +LQ+LVPGC+K+TGKA++L+EIIN
Sbjct: 133 APKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 192
Query: 193 YVQSLQHQVEFLSMKLASVNPMLFDMAMDLDNLLVR----------PEQKVNSLAS---- 238
YVQSLQ QVEFLSMKLA+VNP ++ +D+D +L + P +N A
Sbjct: 193 YVQSLQQQVEFLSMKLATVNP---EINIDIDRILAKDLLQSRDRNTPTLGLNPFAGFQGN 249
Query: 239 -PPLVLPCVPLCNPNPGTT 256
P L P NP P TT
Sbjct: 250 IPNLSATTNPQYNPLPQTT 268
>ref|NP_910691.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 569
Score = 150 bits (378), Expect = 6e-35
Identities = 107/267 (40%), Positives = 139/267 (51%), Gaps = 28/267 (10%)
Query: 26 LEDELLQPHINTTTLHQETSFSVTETSSVDQSSKITISDSELSVEKNQS----PETSMVV 81
+ED ++ N + ++ T +VD SSK ELS+ E + V
Sbjct: 270 IEDIEIEGSKNVSQTGEKQQGDGETTHAVDSSSK------ELSMPGRNGGAGHDEGTRVS 323
Query: 82 ASMEKKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEEDMAKEEKKDK-----------KKG 130
S ++KR ++G K +GG + G+ E+D E K+ K
Sbjct: 324 CSKKRKRSGQDGGV--KHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDN 381
Query: 131 PEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEI 190
P YIHVRARRGQAT+SHSLAERVRREKISERM LQ LVPGC KVTGKA++L+EI
Sbjct: 382 AGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEI 441
Query: 191 INYVQSLQHQVEFLSMKLASVNPML---FDMAMDLDNLLVRPEQKVNSLASPPLVLPCVP 247
INYVQSLQ QVEFLSMKLASVNP L + + D R ++ P ++ P
Sbjct: 442 INYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVH--P 499
Query: 248 LCNPNPGTTFADTSTLNPSTSFPTANH 274
+P T S +NP+ +F H
Sbjct: 500 RLHPPKYTQVGMPSIVNPTDAFGRVIH 526
>dbj|BAD68029.1| putative TA1 protein [Oryza sativa (japonica cultivar-group)]
Length = 437
Score = 150 bits (378), Expect = 6e-35
Identities = 107/267 (40%), Positives = 139/267 (51%), Gaps = 28/267 (10%)
Query: 26 LEDELLQPHINTTTLHQETSFSVTETSSVDQSSKITISDSELSVEKNQS----PETSMVV 81
+ED ++ N + ++ T +VD SSK ELS+ E + V
Sbjct: 138 IEDIEIEGSKNVSQTGEKQQGDGETTHAVDSSSK------ELSMPGRNGGAGHDEGTRVS 191
Query: 82 ASMEKKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEEDMAKEEKKDK-----------KKG 130
S ++KR ++G K +GG + G+ E+D E K+ K
Sbjct: 192 CSKKRKRSGQDGGV--KHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDN 249
Query: 131 PEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEI 190
P YIHVRARRGQAT+SHSLAERVRREKISERM LQ LVPGC KVTGKA++L+EI
Sbjct: 250 AGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEI 309
Query: 191 INYVQSLQHQVEFLSMKLASVNPML---FDMAMDLDNLLVRPEQKVNSLASPPLVLPCVP 247
INYVQSLQ QVEFLSMKLASVNP L + + D R ++ P ++ P
Sbjct: 310 INYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVH--P 367
Query: 248 LCNPNPGTTFADTSTLNPSTSFPTANH 274
+P T S +NP+ +F H
Sbjct: 368 RLHPPKYTQVGMPSIVNPTDAFGRVIH 394
>emb|CAE00874.1| TA1 protein [Oryza sativa (japonica cultivar-group)]
Length = 204
Score = 149 bits (377), Expect = 8e-35
Identities = 81/140 (57%), Positives = 95/140 (67%), Gaps = 11/140 (7%)
Query: 86 KKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARR 145
K N + KG + + NGG K++ KD P EP YIHVRARR
Sbjct: 25 KSTEESNAAAEENSGKGKAAQSNSENGG------GKKQGKDSSSKPPEPPKDYIHVRARR 78
Query: 146 GQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLS 205
G+ATDSHSLAERVRREKIS+RM +LQ LVPGC+KV GKA++L+EIINYVQSLQ QVEFLS
Sbjct: 79 GEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 138
Query: 206 MKLASVNPMLFDMAMDLDNL 225
MKLA+VNP L D +NL
Sbjct: 139 MKLATVNPQL-----DFNNL 153
>ref|NP_914823.1| DNA-binding protein-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 484
Score = 149 bits (377), Expect = 8e-35
Identities = 81/140 (57%), Positives = 95/140 (67%), Gaps = 11/140 (7%)
Query: 86 KKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARR 145
K N + KG + + NGG K++ KD P EP YIHVRARR
Sbjct: 228 KSTEESNAAAEENSGKGKAAQSNSENGG------GKKQGKDSSSKPPEPPKDYIHVRARR 281
Query: 146 GQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLS 205
G+ATDSHSLAERVRREKIS+RM +LQ LVPGC+KV GKA++L+EIINYVQSLQ QVEFLS
Sbjct: 282 GEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 341
Query: 206 MKLASVNPMLFDMAMDLDNL 225
MKLA+VNP L D +NL
Sbjct: 342 MKLATVNPQL-----DFNNL 356
>dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa (japonica
cultivar-group)]
Length = 481
Score = 149 bits (377), Expect = 8e-35
Identities = 81/140 (57%), Positives = 95/140 (67%), Gaps = 11/140 (7%)
Query: 86 KKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARR 145
K N + KG + + NGG K++ KD P EP YIHVRARR
Sbjct: 228 KSTEESNAAAEENSGKGKAAQSNSENGG------GKKQGKDSSSKPPEPPKDYIHVRARR 281
Query: 146 GQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLS 205
G+ATDSHSLAERVRREKIS+RM +LQ LVPGC+KV GKA++L+EIINYVQSLQ QVEFLS
Sbjct: 282 GEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 341
Query: 206 MKLASVNPMLFDMAMDLDNL 225
MKLA+VNP L D +NL
Sbjct: 342 MKLATVNPQL-----DFNNL 356
>gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein
[Arabidopsis thaliana]
Length = 339
Score = 146 bits (368), Expect = 9e-34
Identities = 93/211 (44%), Positives = 129/211 (61%), Gaps = 21/211 (9%)
Query: 34 HINTTTLHQETSFSVTETSSVDQSSKITISDSELSVEKNQSPETSMVVASMEKKRRSRNG 93
H + T ++++ + + + SK+ + L+ E S+ S + + NG
Sbjct: 51 HTDADTSFRDSTGLFLQDTQIPSGSKL--DNGPLTDASKLVKERSINNVSEDSQSSGGNG 108
Query: 94 SPLSK----DPKGGSKKQKKGNGGVKEEDMAKEEKKD--------KKKGPEEPST----G 137
+K KG S K++K G EE+ K++K + K ++PS G
Sbjct: 109 HDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDG 168
Query: 138 YIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSL 197
YIH+RARRGQAT+SHSLAERVRREKISERM LQ LVPGCDKVTGKA++L+EIINYVQSL
Sbjct: 169 YIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSL 228
Query: 198 QHQVEFLSMKLASVNPMLFDMAMDLDNLLVR 228
Q Q+EFLSMKL++VNP+L +L++LL +
Sbjct: 229 QCQIEFLSMKLSAVNPVL---DFNLESLLAK 256
>gb|AAQ14331.1| MYC1 [Catharanthus roseus]
Length = 271
Score = 145 bits (367), Expect = 1e-33
Identities = 84/166 (50%), Positives = 105/166 (62%), Gaps = 4/166 (2%)
Query: 53 SVDQSSKITISDSELSVEKNQSPETSMVVASMEKKRRSRNGSPLSKDPKG---GSKKQKK 109
S++ + ++++ + +Q+P + V + S G S D G K+ K
Sbjct: 54 SMNMNVNLSVNRDHDPMVMDQAPNLNGGVRRRREDDDSAKGVSTSNDANAMNEGDNKRLK 113
Query: 110 GNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNM 169
GG E +K E ++ K E P YIHVRARRGQATDSHSLAER RREKISERM +
Sbjct: 114 -TGGSNENHESKAEGEETAKPAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 172
Query: 170 LQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPML 215
LQ LVPGC+KV GKALVL+EIINY+QSLQ QVEFLSMKL +VN L
Sbjct: 173 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRL 218
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.129 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 516,898,091
Number of Sequences: 2540612
Number of extensions: 21945568
Number of successful extensions: 114506
Number of sequences better than 10.0: 1727
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 1333
Number of HSP's that attempted gapping in prelim test: 107564
Number of HSP's gapped (non-prelim): 4737
length of query: 314
length of database: 863,360,394
effective HSP length: 128
effective length of query: 186
effective length of database: 538,162,058
effective search space: 100098142788
effective search space used: 100098142788
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0175.2