BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0175.11
(923 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S31164 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain, c... 1582 0.0
pir||B35905 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd... 1525 0.0
pir||A35905 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd... 1515 0.0
dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit ... 1511 0.0
emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa (japonica cultivar... 1497 0.0
gb|AAC04687.1| ClpC [Arabidopsis thaliana] gi|25289891|pir||T522... 1494 0.0
dbj|BAA82062.1| AtClpC [Arabidopsis thaliana] gi|25289890|pir||T... 1470 0.0
emb|CAB87915.1| AtClpC [Arabidopsis thaliana] gi|18408722|ref|NP... 1469 0.0
gb|AAD02267.1| ClpC protease [Spinacia oleracea] 1431 0.0
emb|CAA53077.1| clpA [Brassica napus] gi|1168972|sp|P46523|CLPA_... 1415 0.0
ref|ZP_00163644.2| COG0542: ATPases with chaperone activity, ATP... 1254 0.0
ref|NP_681098.1| ATP-dependent Clp protease regulatory subunit [... 1251 0.0
ref|ZP_00325035.1| COG0542: ATPases with chaperone activity, ATP... 1249 0.0
pir||S71553 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cl... 1247 0.0
ref|ZP_00110397.1| COG0542: ATPases with chaperone activity, ATP... 1246 0.0
ref|YP_171963.1| ATP-dependent Clp protease regulatory subunit C... 1245 0.0
dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. ... 1244 0.0
ref|ZP_00162274.2| COG0542: ATPases with chaperone activity, ATP... 1242 0.0
ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [... 1238 0.0
ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, central region:... 1223 0.0
>pir||S31164 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain, chloroplast
[similarity] - garden pea gi|461753|sp|P35100|CLPA_PEA
ATP-dependent clp protease ATP-binding subunit clpA
homolog, chloroplast precursor gi|169128|gb|AAA33680.1|
nuclear encoded precursor to chloroplast protein
Length = 922
Score = 1582 bits (4095), Expect = 0.0
Identities = 809/923 (87%), Positives = 865/923 (93%), Gaps = 1/923 (0%)
Query: 1 MSRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDT 60
M+RVLAQS+++PGLV G + S S+RS+K M L+ LRMSGFSGLRT+N+L+T
Sbjct: 1 MARVLAQSLSVPGLVAGHKDSQHKGSGKSKRSVKTMCALRTSGLRMSGFSGLRTFNHLNT 60
Query: 61 MLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 120
M+RPGLDF SKV +SR+ARA R IP+AMFERFTEKAIKVIML+QEEARRLGHNFVGT
Sbjct: 61 MMRPGLDFHSKVSKAVSSRRARAKRFIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
Query: 121 EQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLEL 180
EQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETA 240
S EEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP NIR QVIRMVGES +
Sbjct: 181 SQEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSVT 240
Query: 241 GVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLV 300
VG G S+NK PTLEEYGTNLTKLA EGKLDPVVGRQ QIERV QILGRRTKNNPCL+
Sbjct: 241 AT-VGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLI 299
Query: 301 GEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEE 360
GEPGVGKTAIAEGLAQRIA GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLMEE
Sbjct: 300 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 359
Query: 361 IKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
IKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 360 IKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 419
Query: 421 PALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFL 480
P LERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD+AL+AA+QLS+QYISDRFL
Sbjct: 420 PDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFL 479
Query: 481 PDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREM 540
PDKAIDL+DEAGSRVRL+HAQLPEEA+ELDKEVR+IVKEK+E VRNQDFEKAGELRD+EM
Sbjct: 480 PDKAIDLVDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEYVRNQDFEKAGELRDKEM 539
Query: 541 DLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLK 600
DLK QISALIEKGKEMSKAE+E GP+VTEVDIQHIV+SWTG+PVDKVS+DESDRLLK
Sbjct: 540 DLKAQISALIEKGKEMSKAETETADEGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLK 599
Query: 601 MEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 660
ME+TLHKR+IGQDEAV+AI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 600 MEDTLHKRIIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 659
Query: 661 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 720
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 660 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 719
Query: 721 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEK 780
AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEK
Sbjct: 720 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 779
Query: 781 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKE 840
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF RLKTKE
Sbjct: 780 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKE 839
Query: 841 IDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADS 900
I+L VTERFRDRVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVI+D DS
Sbjct: 840 IELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 899
Query: 901 DGKVIVLNGSSGAPESLPEALPV 923
DGKVIVLNGSSG PESLPEAL +
Sbjct: 900 DGKVIVLNGSSGTPESLPEALSI 922
>pir||B35905 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd4B, chloroplast
[similarity] - tomato gi|399213|sp|P31542|CLAB_LYCES
ATP-dependent clp protease ATP-binding subunit clpA
homolog CD4B, chloroplast precursor
gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B)
Length = 923
Score = 1525 bits (3948), Expect = 0.0
Identities = 787/924 (85%), Positives = 844/924 (91%), Gaps = 2/924 (0%)
Query: 1 MSRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDT 60
M+R L QS +IP V G N S ++R++ M+ Q+ +L + F+GLR N +DT
Sbjct: 1 MARALVQSTSIPSSVAGERTTKFNGSGKTKRAVTMLCNAQSSSLTLRDFTGLRGCNAIDT 60
Query: 61 MLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 120
++R G +SKV T R+ R R +PKAMFERFTEKAIKVIML+QEEARRLGHNFVGT
Sbjct: 61 LVRSGETLQSKVAAATYVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120
Query: 121 EQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLEL 180
EQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180
Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETA 240
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGESN E
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESN-EAV 239
Query: 241 GVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLV 300
G +VG G S KMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV QILGRRTKNNPCL+
Sbjct: 240 GASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLI 299
Query: 301 GEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEE 360
GEPGVGKTAIAEGLAQRIA GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLMEE
Sbjct: 300 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 359
Query: 361 IKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
IKQ+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 360 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 419
Query: 421 PALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFL 480
PALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD+ LVAA+QLS+QYISDRFL
Sbjct: 420 PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYISDRFL 479
Query: 481 PDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREM 540
PDKAIDLIDEAGSRVRLRHAQLPEEA+EL+KE+RQI KEK+EAVR QDFEKAGELRDREM
Sbjct: 480 PDKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREM 539
Query: 541 DLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLK 600
DLK QI+ALI+K KE+SKAESEA GP+VTE DIQHIV+SWTG+PV+KVS+DESDRLLK
Sbjct: 540 DLKAQITALIDKNKEVSKAESEAADTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLK 599
Query: 601 MEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 660
MEETLH R+IGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 600 MEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 659
Query: 661 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 720
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 660 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 719
Query: 721 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEK 780
AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLD DEK
Sbjct: 720 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEK 779
Query: 781 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKE 840
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF+RLK KE
Sbjct: 780 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKE 839
Query: 841 IDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADS 900
I+L VTERFRDRVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVI+D DS
Sbjct: 840 IELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVDVDS 899
Query: 901 DGKVIVLNGSSGAP-ESLPEALPV 923
DG V VLNGSSG P + PE +PV
Sbjct: 900 DGNVTVLNGSSGTPSDPAPEPIPV 923
>pir||A35905 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd4A, chloroplast
[similarity] - tomato gi|399212|sp|P31541|CLAA_LYCES
ATP-dependent clp protease ATP-binding subunit clpA
homolog CD4A, chloroplast precursor
gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A)
Length = 926
Score = 1515 bits (3923), Expect = 0.0
Identities = 788/926 (85%), Positives = 845/926 (91%), Gaps = 4/926 (0%)
Query: 1 MSRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDT 60
M+R L QS I V G G N S +R+++M+ ++ + R++ F+GLR N LDT
Sbjct: 2 MARALVQSTNILPSVAGERAGQFNGSRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNALDT 61
Query: 61 ML-RPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVG 119
+L + G SKV T R+ R R +PKAMFERFTEKAIKVIML+QEEARRLGHNFVG
Sbjct: 62 LLVKSGETLHSKVAAATFVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 121
Query: 120 TEQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLE 179
TEQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGF+AVEIPFTPRAKRVLE
Sbjct: 122 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFIAVEIPFTPRAKRVLE 181
Query: 180 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNET 239
LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP NIR QVIRMVGES+ E
Sbjct: 182 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESS-EA 240
Query: 240 AGVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCL 299
G +VG G S KMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV QILGRRTKNNPCL
Sbjct: 241 VGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCL 300
Query: 300 VGEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLME 359
+GEPGVGKTAIAEGLAQRIA GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLME
Sbjct: 301 IGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 360
Query: 360 EIKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK 419
EIKQ+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK
Sbjct: 361 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK 420
Query: 420 DPALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRF 479
DPALERRFQPV+VPEP+VDE+IQIL+GLRERYE HHKL YTD+A+ AA++LSHQYISDRF
Sbjct: 421 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRF 480
Query: 480 LPDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDRE 539
LPDKAIDLIDEAGSRVRLRHAQLPEEAREL+KE+RQI KEK+EAVR QDFEKAGELRDRE
Sbjct: 481 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 540
Query: 540 MDLKTQISALIEKGKEMSKAESEA-DGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRL 598
MDLK QISALI+K KE SKAESEA D AGP+VTE DIQHIV+SWTG+PV+KVS+DESDRL
Sbjct: 541 MDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADIQHIVSSWTGIPVEKVSTDESDRL 600
Query: 599 LKMEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLA 658
LKMEETLH RVIGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK+LA
Sbjct: 601 LKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLA 660
Query: 659 SYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 718
+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI
Sbjct: 661 TYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 720
Query: 719 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYD 778
EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLD+D
Sbjct: 721 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFD 780
Query: 779 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 838
EKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFRQLTKLEVKEIADIMLKEVF RLK
Sbjct: 781 EKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKN 840
Query: 839 KEIDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDA 898
KEI+L VTERFRDRVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVI+D
Sbjct: 841 KEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDV 900
Query: 899 DSDGKVIVLNGSSGAP-ESLPEALPV 923
DSDG V VLNG+SGAP +S PE + V
Sbjct: 901 DSDGNVTVLNGTSGAPSDSAPEPILV 926
>dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis
thaliana] gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7
[Arabidopsis thaliana] gi|18423214|ref|NP_568746.1|
ATP-dependent Clp protease ATP-binding subunit / ClpC
[Arabidopsis thaliana]
Length = 929
Score = 1511 bits (3913), Expect = 0.0
Identities = 787/927 (84%), Positives = 847/927 (90%), Gaps = 8/927 (0%)
Query: 2 SRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMM-STLQAPALRMSGFSGLRTYNNLDT 60
+RVLAQS T P L C + + + S SRRS+KMM S LQ LRM GF GLR N LDT
Sbjct: 5 TRVLAQS-TPPSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALDT 63
Query: 61 MLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 120
+ + DF SKV K +ASR KAMFERFTEKAIKVIML+QEEARRLGHNFVGT
Sbjct: 64 LGKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 123
Query: 121 EQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLEL 180
EQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 124 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 183
Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETA 240
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGE+N TA
Sbjct: 184 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTA 243
Query: 241 GVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLV 300
V G G SSNKMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV+QILGRRTKNNPCL+
Sbjct: 244 NV--GGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 301
Query: 301 GEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEE 360
GEPGVGKTAIAEGLAQRIA+GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLMEE
Sbjct: 302 GEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 361
Query: 361 IKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
I+Q+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 362 IRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 421
Query: 421 PALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFL 480
PALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD++LVAA+QLS+QYISDRFL
Sbjct: 422 PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFL 481
Query: 481 PDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREM 540
PDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KE+RQI KEK+EAVR QDFEKAG LRDRE+
Sbjct: 482 PDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDREI 541
Query: 541 DLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLK 600
+L+ ++SA+ KGKEMSKAESE GP+VTE DIQHIV+SWTG+PV+KVS+DESDRLLK
Sbjct: 542 ELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLK 601
Query: 601 MEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 660
MEETLHKR+IGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 602 MEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 661
Query: 661 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 720
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 662 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 721
Query: 721 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEK 780
AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEK
Sbjct: 722 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 781
Query: 781 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKE 840
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKEVF+RLK KE
Sbjct: 782 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKKE 841
Query: 841 IDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADS 900
I+L VTERF++RVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVI+D D+
Sbjct: 842 IELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDA 901
Query: 901 DGKVIVLNGSSGAP----ESLPEALPV 923
+G V VLNG SG P E ++LPV
Sbjct: 902 EGNVTVLNGGSGTPTTSLEEQEDSLPV 928
>emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa (japonica cultivar-group)]
gi|50923949|ref|XP_472335.1| OSJNBa0039C07.4 [Oryza
sativa (japonica cultivar-group)]
Length = 888
Score = 1497 bits (3875), Expect = 0.0
Identities = 768/889 (86%), Positives = 818/889 (91%), Gaps = 1/889 (0%)
Query: 35 MMSTLQAPALRMSGFSGLRTYNNLDTMLRPGLDFRSKVFGVTTSRKARASRCIPKAMFER 94
MM T+ L + GF GLR N LD+ DF S V + + SR + +AMFER
Sbjct: 1 MMRTMPTRTLTLGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPRGLGSRGVVRAMFER 60
Query: 95 FTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDARVEVE 154
FTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVE
Sbjct: 61 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVE 120
Query: 155 KTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL 214
K IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL
Sbjct: 121 KIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL 180
Query: 215 QDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDP 274
+ LGADPNNIR QVIRMVGES E G VG G S KMPTLEEYGTNLTKLA EGKLDP
Sbjct: 181 ESLGADPNNIRTQVIRMVGEST-EAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDP 239
Query: 275 VVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGKEVIT 334
VVGRQ QIERV QILGRRTKNNPCL+GEPGVGKTAIAEGLAQRI+ GDVPETIEGK+VIT
Sbjct: 240 VVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVIT 299
Query: 335 LDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAANILK 394
LDMGLLVAGTKYRGEFEERLKKLMEEIKQND+IILFIDEVHTLIGAGAAEGAIDAANILK
Sbjct: 300 LDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILK 359
Query: 395 PALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRERYERH 454
PALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE+IQILRGLRERYE H
Sbjct: 360 PALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELH 419
Query: 455 HKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVR 514
HKL YTDD+L+AA+QLS+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+ELDKE+R
Sbjct: 420 HKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELR 479
Query: 515 QIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPVVTEVD 574
Q+ K+K+EAVR QDFEKAGELRDREM+LK QI+A+I+K KEM KAE+E+ GP+VTE D
Sbjct: 480 QVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEAD 539
Query: 575 IQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVGLKNPN 634
IQHIV+SWTG+PV+KVSSDESDRLLKMEETLH R+IGQDEAVKAI RAIRRARVGLKNPN
Sbjct: 540 IQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPN 599
Query: 635 RPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 694
RPIASFIFSGPTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG
Sbjct: 600 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 659
Query: 695 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 754
YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI
Sbjct: 660 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 719
Query: 755 MTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 814
MTSNVGSSVIEKGGRKIGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR
Sbjct: 720 MTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 779
Query: 815 QLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRL 874
QLTKLEVKEIADIMLKEVFDRLK K+IDL VTE+FRDRVV+EGY+PSYGARPLRRAIMRL
Sbjct: 780 QLTKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRL 839
Query: 875 LEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEALPV 923
LEDS+AEKMLAGE+KEGDS I+D DS+GKVIVLNG SG PE L AL V
Sbjct: 840 LEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 888
>gb|AAC04687.1| ClpC [Arabidopsis thaliana] gi|25289891|pir||T52292 endopeptidase
Clp (EC 3.4.21.92) ATP-binding chain C, chloroplast
[imported] - Arabidopsis thaliana
Length = 928
Score = 1494 bits (3867), Expect = 0.0
Identities = 778/926 (84%), Positives = 839/926 (90%), Gaps = 7/926 (0%)
Query: 2 SRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDTM 61
+RVLAQS T P L C + + + S SRRS+KMM + L M GF GLR N LDT+
Sbjct: 5 TRVLAQS-TPPSLACYQRNVPSRGSGRSRRSVKMMCIIFNVWLPMQGFMGLRGNNALDTL 63
Query: 62 LRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTE 121
+ DF SKV K +ASR KAMFERFTEKAIKVIML+QEEARRLGHNFVGTE
Sbjct: 64 GKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 123
Query: 122 QILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLELS 181
QILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLELS
Sbjct: 124 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 183
Query: 182 LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETAG 241
LE RQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGE+N TA
Sbjct: 184 LEATRQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTAN 243
Query: 242 VAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLVG 301
V G G SSNKMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV+QILGRRTKNNPCL+G
Sbjct: 244 V--GGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 301
Query: 302 EPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEEI 361
EPGVGKTAIAEGLAQRIA+GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLMEEI
Sbjct: 302 EPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 361
Query: 362 KQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP 421
+Q+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
Sbjct: 362 RQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP 421
Query: 422 ALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFLP 481
ALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD++LVAA+QLS+QYISDRFLP
Sbjct: 422 ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLP 481
Query: 482 DKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREMD 541
DKAIDLIDEAGSRVRLRHAQ+PEE REL+KE+RQI KEK+EAVR QDFEKAG LRDRE++
Sbjct: 482 DKAIDLIDEAGSRVRLRHAQVPEEVRELEKELRQITKEKNEAVRGQDFEKAGTLRDREIE 541
Query: 542 LKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLKM 601
L+ ++SA+ KGKEMSKAESE GP+VTE DIQHIV+SWTG+PV+KVS+DESDRLLKM
Sbjct: 542 LRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKM 601
Query: 602 EETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASYY 661
EETLHKR+IGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+YY
Sbjct: 602 EETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 661
Query: 662 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 721
FGSEEAMIRLDMSEFMERHTVS LIGS PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
Sbjct: 662 FGSEEAMIRLDMSEFMERHTVSTLIGSLPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 721
Query: 722 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKD 781
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEKD
Sbjct: 722 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 781
Query: 782 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEI 841
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKEVF+RLK KEI
Sbjct: 782 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKKEI 841
Query: 842 DLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSD 901
+L VTERF++RVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVI+D D++
Sbjct: 842 ELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDAE 901
Query: 902 GKVIVLNGSSGAP----ESLPEALPV 923
G V VLNG SG P E ++LPV
Sbjct: 902 GNVTVLNGGSGTPTTSLEEQEDSLPV 927
>dbj|BAA82062.1| AtClpC [Arabidopsis thaliana] gi|25289890|pir||T52456 endopeptidase
Clp ATP-binding chain C [imported] - Arabidopsis
thaliana
Length = 952
Score = 1470 bits (3806), Expect = 0.0
Identities = 753/900 (83%), Positives = 829/900 (91%), Gaps = 7/900 (0%)
Query: 30 RRSLKMMSTLQAPALRMSGFSGLRTYNNLDTMLRPGLDFRSKVFGVTTSRKARASRCIPK 89
R +KMMS+LQAP L + FSGLR + LD + RP F K +S + +ASRC+PK
Sbjct: 53 RGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPK 112
Query: 90 AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDA 149
AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGL+GEGTGIAA+VLK+MGI+LKD+
Sbjct: 113 AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDS 172
Query: 150 RVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 209
RVEVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV
Sbjct: 173 RVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 232
Query: 210 AARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANE 269
AARVL++LGADP+NIR QVIRMVGE+N TA V G G+S KMPTLEEYGTNLTKLA E
Sbjct: 233 AARVLENLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNS-KMPTLEEYGTNLTKLAEE 291
Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
GKLDPVVGRQ QIERV+QIL RRTKNNPCL+GEPGVGKTAIAEGLAQRIA+GDVPETIEG
Sbjct: 292 GKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEG 351
Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
K VITLDMGLLVAGTKYRGEFEERLKKLMEEI+Q+D IILFIDEVHTLIGAGAAEGAIDA
Sbjct: 352 KTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDA 411
Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
ANILKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPV+VPEPTV+E+IQIL+GLRE
Sbjct: 412 ANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRE 471
Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
RYE HHKL YTD+ALVAA+QLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL
Sbjct: 472 RYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 531
Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
+K++RQI KEK+EAVR+QDFE AG RDRE++LK +I+ ++ +GKE++KAE+EA+ GP
Sbjct: 532 EKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPT 591
Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
VTE DIQHIVA+WTG+PV+KVSSDES RLL+ME+TLH RVIGQDEAVKAI RAIRRARVG
Sbjct: 592 VTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVG 651
Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
LKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSP
Sbjct: 652 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 711
Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
PGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK
Sbjct: 712 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 771
Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
NTLLIMTSNVGSSVIEKGGR+IGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE
Sbjct: 772 NTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 831
Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
MIVFRQLTKLEVKEIADIMLKEV RL+ KEI+L VTERF++RVV+EG+DPSYGARPLRR
Sbjct: 832 MIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRR 891
Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSG------APESLPEALPV 923
AIMRLLEDSMAEKML+ +IKEGDSVI+D D++G V+VL+G++G A E++ + +P+
Sbjct: 892 AIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPI 951
>emb|CAB87915.1| AtClpC [Arabidopsis thaliana] gi|18408722|ref|NP_566912.1|
ATP-dependent Clp protease ATP-binding subunit (ClpC)
[Arabidopsis thaliana] gi|11265212|pir||T49283 AtClpC -
Arabidopsis thaliana
Length = 952
Score = 1469 bits (3803), Expect = 0.0
Identities = 752/900 (83%), Positives = 829/900 (91%), Gaps = 7/900 (0%)
Query: 30 RRSLKMMSTLQAPALRMSGFSGLRTYNNLDTMLRPGLDFRSKVFGVTTSRKARASRCIPK 89
R +KMMS+LQAP L + FSGLR + LD + RP F K +S + +ASRC+PK
Sbjct: 53 RGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPK 112
Query: 90 AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDA 149
AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGL+GEGTGIAA+VLK+MGI+LKD+
Sbjct: 113 AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDS 172
Query: 150 RVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 209
RVEVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV
Sbjct: 173 RVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 232
Query: 210 AARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANE 269
AARVL++LGADP+NIR QVIRMVGE+N TA V G G+S KMPTLEEYGTNLTKLA E
Sbjct: 233 AARVLENLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNS-KMPTLEEYGTNLTKLAEE 291
Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
GKLDPVVGRQ QIER++QIL RRTKNNPCL+GEPGVGKTAIAEGLAQRIA+GDVPETIEG
Sbjct: 292 GKLDPVVGRQPQIERMVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEG 351
Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
K VITLDMGLLVAGTKYRGEFEERLKKLMEEI+Q+D IILFIDEVHTLIGAGAAEGAIDA
Sbjct: 352 KTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDA 411
Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
ANILKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPV+VPEPTV+E+IQIL+GLRE
Sbjct: 412 ANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRE 471
Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
RYE HHKL YTD+ALVAA+QLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL
Sbjct: 472 RYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 531
Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
+K++RQI KEK+EAVR+QDFE AG RDRE++LK +I+ ++ +GKE++KAE+EA+ GP
Sbjct: 532 EKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPT 591
Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
VTE DIQHIVA+WTG+PV+KVSSDES RLL+ME+TLH RVIGQDEAVKAI RAIRRARVG
Sbjct: 592 VTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVG 651
Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
LKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSP
Sbjct: 652 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 711
Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
PGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK
Sbjct: 712 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 771
Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
NTLLIMTSNVGSSVIEKGGR+IGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE
Sbjct: 772 NTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 831
Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
MIVFRQLTKLEVKEIADIMLKEV RL+ KEI+L VTERF++RVV+EG+DPSYGARPLRR
Sbjct: 832 MIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRR 891
Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSG------APESLPEALPV 923
AIMRLLEDSMAEKML+ +IKEGDSVI+D D++G V+VL+G++G A E++ + +P+
Sbjct: 892 AIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPI 951
>gb|AAD02267.1| ClpC protease [Spinacia oleracea]
Length = 891
Score = 1431 bits (3705), Expect = 0.0
Identities = 747/889 (84%), Positives = 799/889 (89%), Gaps = 2/889 (0%)
Query: 1 MSRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDT 60
M+ L QS IP L + +G RS +++KMM++LQ P RM FSG+R N LDT
Sbjct: 1 MAGALIQSTNIPSLAY-KVNGQFQRSDKGNKAVKMMASLQDPGYRMRTFSGVRGGNALDT 59
Query: 61 MLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 120
+ F SK+ V + RK ASR + +AMFERFTEKAIKVIML+QEEARRLGHNFVGT
Sbjct: 60 LGTTSECFYSKMRAVLSVRKGTASRGVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 119
Query: 121 EQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLEL 180
EQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 120 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 179
Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETA 240
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGE N E
Sbjct: 180 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGE-NTEAV 238
Query: 241 GVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLV 300
G VG G + NKMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV QILGRRTKNNPCL+
Sbjct: 239 GAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLI 298
Query: 301 GEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEE 360
GEPGVGKTAIAEGLAQRIATGDVPETIEGK+VITL MGLLVAGTKYRGEFEERLKKLMEE
Sbjct: 299 GEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLHMGLLVAGTKYRGEFEERLKKLMEE 358
Query: 361 IKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
IKQ+D IILFIDEVHTLIGAGAAEGAID ANILKP RGELQCIGATTLDEYRKHIEKD
Sbjct: 359 IKQSDEIILFIDEVHTLIGAGAAEGAIDRANILKPRFRRGELQCIGATTLDEYRKHIEKD 418
Query: 421 PALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFL 480
PALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD+ALVAA+QLS+QYISDRFL
Sbjct: 419 PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFL 478
Query: 481 PDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREM 540
PDKAIDLIDEAGSRV + E + +KE+RQ+ KEK+EAVR QDFEKAGELRDREM
Sbjct: 479 PDKAIDLIDEAGSRVLPSSLKKLESWLQHEKELRQLTKEKNEAVRGQDFEKAGELRDREM 538
Query: 541 DLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLK 600
DLK QISAL+EK KEMSKAE+EA GP+VTE DIQHIV+SWTG+PV+KVS+DESDRLLK
Sbjct: 539 DLKAQISALVEKKKEMSKAETEAGDVGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLK 598
Query: 601 MEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 660
ME+TLH RVIGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 599 MEDTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 658
Query: 661 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 720
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 659 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 718
Query: 721 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEK 780
AHPDVFNMMLQILEDGRLTDSKGRT DFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEK
Sbjct: 719 AHPDVFNMMLQILEDGRLTDSKGRTADFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 778
Query: 781 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKE 840
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF RLK KE
Sbjct: 779 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFGRLKNKE 838
Query: 841 IDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIK 889
I+L VTERFRDRVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA + K
Sbjct: 839 IELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLARKSK 887
>emb|CAA53077.1| clpA [Brassica napus] gi|1168972|sp|P46523|CLPA_BRANA ATP-dependent
clp protease ATP-binding subunit clpA homolog,
chloroplast precursor gi|480969|pir||S37557
endopeptidase Clp ATP-binding chain A, chloroplast -
rape (fragment)
Length = 874
Score = 1415 bits (3664), Expect = 0.0
Identities = 735/872 (84%), Positives = 797/872 (91%), Gaps = 8/872 (0%)
Query: 56 NNLDTMLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGH 115
N LDT+ R F KV K + SR + KAMFERFTEKAIKVIML+QEEARRLGH
Sbjct: 6 NVLDTLGRSRQSFGGKVRQAMNVPKGKGSRGVVKAMFERFTEKAIKVIMLAQEEARRLGH 65
Query: 116 NFVGTEQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAK 175
NFVGTEQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAK
Sbjct: 66 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK 125
Query: 176 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGES 235
RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGE+
Sbjct: 126 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEN 185
Query: 236 NNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKN 295
N TA V G G +NKMPTLEEYGTNLTKLA EGKLDPVVGR QIERV+QILGRRTKN
Sbjct: 186 NEVTANV--GGGSGTNKMPTLEEYGTNLTKLAEEGKLDPVVGRHPQIERVVQILGRRTKN 243
Query: 296 NPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLK 355
NPCL+GEPGVGKTAIAEGLAQRIA+G V ET EGK+VITLDMGLL AGTKYRGEFEER+K
Sbjct: 244 NPCLIGEPGVGKTAIAEGLAQRIASGVVRETSEGKKVITLDMGLLAAGTKYRGEFEERVK 303
Query: 356 KLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRK 415
KLMEEIKQ+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRK
Sbjct: 304 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRK 363
Query: 416 HIEKDPALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYI 475
HIEKDPALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD++LVAA+QLS+QYI
Sbjct: 364 HIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYI 423
Query: 476 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGEL 535
SDRFLPD+AIDL+DEAGSRVRLRHAQ+PEEAREL+KE+RQI KE +EAVR QDFEKAG L
Sbjct: 424 SDRFLPDRAIDLMDEAGSRVRLRHAQVPEEARELEKELRQITKE-NEAVRGQDFEKAGTL 482
Query: 536 RDREMDLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDES 595
RDRE++L+ ++SA+ KGKEMSKAESE GP+VTE DIQHIV+SWTG+ V+KVS+DES
Sbjct: 483 RDREIELRAEVSAIQAKGKEMSKAESETGDEGPMVTESDIQHIVSSWTGILVEKVSTDES 542
Query: 596 DRLLKMEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 655
D LLKMEETLHKRVIGQDEAVKAI RAIRRARVGLKNPNRPIASFIF GPTGVGKSELAK
Sbjct: 543 DLLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFFGPTGVGKSELAK 602
Query: 656 TLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 715
LA+YYFG EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE QLTEAVRRRPYTVVLF
Sbjct: 603 ALAAYYFGCEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEPPQLTEAVRRRPYTVVLF 662
Query: 716 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDL 775
DEIEKAHPDVFNMMLQILEDGRLT+SKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDL
Sbjct: 663 DEIEKAHPDVFNMMLQILEDGRLTNSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 722
Query: 776 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 835
DY EKDSSYNRIKSLVT+ELKQYFRPEFLNRLDEMI+FRQLTKLEVKEIADI+L+E+F+R
Sbjct: 723 DY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIADILLQELFER 781
Query: 836 LKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVI 895
LK KE++L VTERF++RVV+EGY+PSYGARPLRRAIMRLLEDSM EKMLA EIKEGDSVI
Sbjct: 782 LKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIKEGDSVI 841
Query: 896 IDADSDGKVIVLNGSSGAP----ESLPEALPV 923
+D DS+GKV VLNG SG P E ++LPV
Sbjct: 842 VDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPV 873
>ref|ZP_00163644.2| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Synechococcus elongatus PCC 7942]
Length = 839
Score = 1254 bits (3244), Expect = 0.0
Identities = 636/834 (76%), Positives = 741/834 (88%), Gaps = 10/834 (1%)
Query: 89 KAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKD 148
+AMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKD
Sbjct: 14 EAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKD 73
Query: 149 ARVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 208
AR+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEG
Sbjct: 74 ARIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEG 133
Query: 209 VAARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLAN 268
VAARVL++LG D + +R QVIRM+GE TA V+ G G K PTL+E+G+NLT+ A
Sbjct: 134 VAARVLENLGVDLSKVRTQVIRMLGE----TAEVSTGGGQGRTKTPTLDEFGSNLTQQAA 189
Query: 269 EGKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIE 328
+GKLDPVVGRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIATGD+P+ +E
Sbjct: 190 DGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILE 249
Query: 329 GKEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAID 388
K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ N+IL IDEVHTLIGAGAAEGAID
Sbjct: 250 DKRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAID 309
Query: 389 AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLR 448
AANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VD++I+ILRGLR
Sbjct: 310 AANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLR 369
Query: 449 ERYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 508
ERYE+HHKL D+AL AA++L+ +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+E
Sbjct: 370 ERYEQHHKLKIADEALEAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLMNSQLPPAAKE 429
Query: 509 LDKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGP 568
LDKE+RQ++K+KD+AVR+QDF+KAGELRDREM++KTQI ++ + K + S D + P
Sbjct: 430 LDKELRQVLKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKK--ADGTSSTDDS-P 486
Query: 569 VVTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARV 628
+VTE DI HIVASWTGVPV+K++ ES +LL MEETLH R+IGQDEAVKA+ RAIRRARV
Sbjct: 487 IVTEEDIAHIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARV 546
Query: 629 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGS 688
GLKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGS
Sbjct: 547 GLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGS 606
Query: 689 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 748
PPGYVGY EGGQLTEAVRRRPYTVVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDF
Sbjct: 607 PPGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDF 666
Query: 749 KNTLLIMTSNVGSSVIEKGGRKIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 807
KNTL+I+TSN+GS VIEKGG +GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRL
Sbjct: 667 KNTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRL 726
Query: 808 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPL 867
DE+IVFRQL K EVKEIADIML+EVF R+ K I LSVTE+F+DR+VEEGY+PSYGARPL
Sbjct: 727 DEIIVFRQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPL 786
Query: 868 RRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
RRAIMRLLEDS+AE+ L+G+++EGD+ ++D +GKV VL + E LP+A+
Sbjct: 787 RRAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL--AQEKRELLPQAV 838
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/82 (42%), Positives = 57/82 (68%)
Query: 159 RGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLG 218
R +G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+ +G
Sbjct: 9 RHAGREAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMG 68
Query: 219 ADPNNIRAQVIRMVGESNNETA 240
+ + R +V +++G + A
Sbjct: 69 VNLKDARIEVEKIIGRGSGFVA 90
>ref|NP_681098.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1] gi|22294028|dbj|BAC07860.1|
ATP-dependent Clp protease regulatory subunit
[Thermosynechococcus elongatus BP-1]
Length = 824
Score = 1251 bits (3236), Expect = 0.0
Identities = 641/833 (76%), Positives = 738/833 (87%), Gaps = 12/833 (1%)
Query: 91 MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VL++MG++LKDAR
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDAR 60
Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61 IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120
Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
ARVL++LG D + +R QVIRM+GE+ TAG + GR K PTL+E+G NLT+LA EG
Sbjct: 121 ARVLENLGVDLSKVRTQVIRMLGETAEVTAGASQGR----TKTPTLDEFGVNLTQLAIEG 176
Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
KLDPVVGRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIA DVP+ +E K
Sbjct: 177 KLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDK 236
Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 237 RVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAA 296
Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V+E+I+IL GLRER
Sbjct: 297 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRER 356
Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
YE+HHKL +D+AL AA++LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+ELD
Sbjct: 357 YEKHHKLKISDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELD 416
Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGK-EMSKAESEADGAGPV 569
+E+RQ++KEKD+AVR Q+F+KAGELRDREM+LK QI A+ ++ K E++ E E PV
Sbjct: 417 RELRQVLKEKDDAVRAQNFDKAGELRDREMELKAQIRAIAQQKKAEIANGEEET----PV 472
Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
VTE DI HIVASWTGVPV K++ ES++LL MEETLH+RVIGQDEAVKAI RAIRRARVG
Sbjct: 473 VTEEDIAHIVASWTGVPVSKLTESESEKLLHMEETLHQRVIGQDEAVKAISRAIRRARVG 532
Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
LKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSP
Sbjct: 533 LKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSP 592
Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
PGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFK
Sbjct: 593 PGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFK 652
Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLD 808
NTLLIMTSN+GS VIEKG +GF+ D +S YNRI+SLV EELKQYFRPEFLNRLD
Sbjct: 653 NTLLIMTSNIGSKVIEKGAAGLGFEFGTEDAAESQYNRIRSLVNEELKQYFRPEFLNRLD 712
Query: 809 EMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLR 868
E+IVFRQLTK EVK+IADI+LKEVF RL K I L VTERF++R+++EGY+PSYGARPLR
Sbjct: 713 EIIVFRQLTKDEVKQIADILLKEVFSRLTEKGITLEVTERFKERLIDEGYNPSYGARPLR 772
Query: 869 RAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
RAIMRLLED++AE+ML+G I+EGD+ +ID D G+V + + E LP+A+
Sbjct: 773 RAIMRLLEDTLAEEMLSGRIREGDTALIDVDESGQVKI--QAQPRRELLPQAV 823
>ref|ZP_00325035.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Trichodesmium erythraeum IMS101]
Length = 825
Score = 1249 bits (3232), Expect = 0.0
Identities = 630/819 (76%), Positives = 729/819 (88%), Gaps = 8/819 (0%)
Query: 91 MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDAR
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61 IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120
Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
ARVL++LG D +R QVIRM+GE TA V G GG K PTL+E+G+NLT++A+EG
Sbjct: 121 ARVLENLGVDLTKVRTQVIRMLGE----TAEVTAGGGGGRTKTPTLDEFGSNLTQMASEG 176
Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
KLDPVVGRQ +IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIA D+P+ +E K
Sbjct: 177 KLDPVVGRQTEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEK 236
Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 237 RVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAA 296
Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDE+I+IL GLRER
Sbjct: 297 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRER 356
Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
YE+HHKL D AL AA++LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+ELD
Sbjct: 357 YEQHHKLKILDTALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELD 416
Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPVV 570
KE+R I+KEKDEAVR+QDF+KAGELRDREM++K++I +L + K S E ++ P+V
Sbjct: 417 KELRSILKEKDEAVRSQDFDKAGELRDREMEIKSEIRSLAQNKKLDSTNEDDS----PMV 472
Query: 571 TEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVGL 630
TE DI HIVASWTGVPV+K++ ES++LL ME+TLH+R+IGQ+EAVKA+ RAIRRARVGL
Sbjct: 473 TEEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGL 532
Query: 631 KNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 690
KNPNRPIASF+FSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPP
Sbjct: 533 KNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPP 592
Query: 691 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 750
GYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKN
Sbjct: 593 GYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKN 652
Query: 751 TLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 810
TL+IMTSN+GS VIEKGG +GF+ +E D+ YNRI++LV EELKQYFRPEFLNRLDE+
Sbjct: 653 TLIIMTSNIGSKVIEKGGGGLGFEFSENEADAQYNRIRNLVNEELKQYFRPEFLNRLDEI 712
Query: 811 IVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRRA 870
IVFRQLTK EVKEI+ I+LKEVF RL K I L +T+RF++R+VEEGY+PSYGARPLRRA
Sbjct: 713 IVFRQLTKDEVKEISVILLKEVFSRLTEKGIKLEITDRFQERLVEEGYNPSYGARPLRRA 772
Query: 871 IMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNG 909
IMRLLEDS+AE++LAG+I EGD+ ++D G++IV G
Sbjct: 773 IMRLLEDSLAEEILAGKINEGDTAVVDVGESGQIIVSKG 811
>pir||S71553 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity]
- Synechococcus sp. (strain PCC 7942)
gi|755163|gb|AAB67745.1| ClpC
Length = 839
Score = 1247 bits (3226), Expect = 0.0
Identities = 633/834 (75%), Positives = 739/834 (87%), Gaps = 10/834 (1%)
Query: 89 KAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKD 148
+AMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKD
Sbjct: 14 EAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKD 73
Query: 149 ARVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 208
AR+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEG
Sbjct: 74 ARIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEG 133
Query: 209 VAARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLAN 268
VAARVL++LG D + +R QVIRM+GE TA V+ G G K PTL+E+G+NLT+ A
Sbjct: 134 VAARVLENLGVDLSKVRTQVIRMLGE----TAEVSTGGGQGRTKTPTLDEFGSNLTQQAA 189
Query: 269 EGKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIE 328
+GKLDPVVGRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIATGD+P+ +E
Sbjct: 190 DGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILE 249
Query: 329 GKEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAID 388
K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ N+IL IDEVHTLIGAGAAEGAID
Sbjct: 250 DKRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAID 309
Query: 389 AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLR 448
AANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV + EP+VD++I+ILRGLR
Sbjct: 310 AANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMLGEPSVDDTIEILRGLR 369
Query: 449 ERYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 508
ERYE+HHKL D+AL AA++L+ +YISD FLPDKAIDLIDEAGSRVRL ++QL A+E
Sbjct: 370 ERYEQHHKLKIADEALEAAAKLADRYISDLFLPDKAIDLIDEAGSRVRLMNSQLAPAAKE 429
Query: 509 LDKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGP 568
LDKE+RQ++K+KD+AVR+QDF+KAGELRDREM++KTQI ++ + K + S D + P
Sbjct: 430 LDKELRQVLKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKK--ADGTSSTDDS-P 486
Query: 569 VVTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARV 628
+VTE DI HIVASWTGVPV+K++ ES +LL MEETLH R+IGQDEAVKA+ RAIRRARV
Sbjct: 487 IVTEEDIAHIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARV 546
Query: 629 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGS 688
GLKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGS
Sbjct: 547 GLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGS 606
Query: 689 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 748
PPGYVGY EGGQLTEAVRRRPYTVVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDF
Sbjct: 607 PPGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDF 666
Query: 749 KNTLLIMTSNVGSSVIEKGGRKIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 807
KNTL+I+TSN+GS VIEKGG +GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRL
Sbjct: 667 KNTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRL 726
Query: 808 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPL 867
DE+IVFRQL K EVKEIADIML+EVF R+ K I LSVTE+F+DR+VEEGY+PSYGARPL
Sbjct: 727 DEIIVFRQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPL 786
Query: 868 RRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
RRAIMRLLEDS+AE+ L+G+++EGD+ ++D +GKV VL + E LP+A+
Sbjct: 787 RRAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL--AQEKRELLPQAV 838
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/82 (42%), Positives = 57/82 (68%)
Query: 159 RGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLG 218
R +G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+ +G
Sbjct: 9 RHAGREAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMG 68
Query: 219 ADPNNIRAQVIRMVGESNNETA 240
+ + R +V +++G + A
Sbjct: 69 VNLKDARIEVEKIIGRGSGFVA 90
>ref|ZP_00110397.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Nostoc punctiforme PCC 73102]
Length = 822
Score = 1246 bits (3225), Expect = 0.0
Identities = 632/831 (76%), Positives = 734/831 (88%), Gaps = 10/831 (1%)
Query: 91 MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDAR
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61 IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120
Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
ARVL++LG D + +R QVIRM+GE TA V+ G K PTL+E+G+NLT++A +
Sbjct: 121 ARVLENLGVDLSKVRTQVIRMLGE----TAEVSPGGSSGRTKTPTLDEFGSNLTQMAIDN 176
Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
KLDPVVGR ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLA RIAT DVP+ +E K
Sbjct: 177 KLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIATKDVPDILEDK 236
Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 237 RVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAA 296
Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPTVDE+I+IL GLRER
Sbjct: 297 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRER 356
Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
YE+HHKL +D+ALVAA++LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+ELD
Sbjct: 357 YEQHHKLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELD 416
Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPVV 570
KE+RQI+KEKD+AVR+QDF+KAGELRDREM++K +I A+ + + E E PVV
Sbjct: 417 KELRQILKEKDDAVRSQDFDKAGELRDREMEIKAEIRAIAQSKTNATGTEGEE----PVV 472
Query: 571 TEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVGL 630
TE DI HIVASWTGVPV+K++ ES++LL ME+TLH+R+IGQDEAV+A+ RAIRRARVGL
Sbjct: 473 TEEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQDEAVRAVSRAIRRARVGL 532
Query: 631 KNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 690
KNPNRPIASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPP
Sbjct: 533 KNPNRPIASFVFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPP 592
Query: 691 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 750
GYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKN
Sbjct: 593 GYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKN 652
Query: 751 TLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 810
TLLI+TSN+GS VIEKGG IGF+ D +S+YNRI+SLV EELKQYFRPEFLNRLDE+
Sbjct: 653 TLLILTSNIGSKVIEKGGSGIGFEFSEDASESTYNRIRSLVNEELKQYFRPEFLNRLDEI 712
Query: 811 IVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRRA 870
IVFRQL+K EV +IA+IMLKEVF RL K I L VT+RF+DR+++EGY PSYGARPLRRA
Sbjct: 713 IVFRQLSKPEVTQIAEIMLKEVFGRLTEKGITLEVTDRFKDRLIQEGYSPSYGARPLRRA 772
Query: 871 IMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
IMRLLEDS+AE++L+G IK+GD+ ++D D +G V V S E LP+ +
Sbjct: 773 IMRLLEDSLAEEILSGRIKDGDTALVDVDENGVVQV--SSQQRRELLPQGV 821
>ref|YP_171963.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301] gi|56686221|dbj|BAD79443.1|
ATP-dependent Clp protease regulatory subunit ClpC
[Synechococcus elongatus PCC 6301]
Length = 839
Score = 1245 bits (3221), Expect = 0.0
Identities = 632/834 (75%), Positives = 738/834 (87%), Gaps = 10/834 (1%)
Query: 89 KAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKD 148
+AMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKD
Sbjct: 14 EAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKD 73
Query: 149 ARVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 208
AR+EVEK IGRGSGFVA EIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEG
Sbjct: 74 ARIEVEKIIGRGSGFVAAEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEG 133
Query: 209 VAARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLAN 268
VAARVL++LG D + +R QVIRM+GE TA V+ G G K PTL+E+G+NLT+ A
Sbjct: 134 VAARVLENLGVDLSKVRTQVIRMLGE----TAEVSTGGGQGRTKTPTLDEFGSNLTQQAA 189
Query: 269 EGKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIE 328
+GKLDPVVGRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIATGD+P+ +E
Sbjct: 190 DGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILE 249
Query: 329 GKEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAID 388
K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ ++IL IDEVHTLIGAGAAEGAID
Sbjct: 250 DKRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGDVILVIDEVHTLIGAGAAEGAID 309
Query: 389 AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLR 448
AANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VD++I+ILRGLR
Sbjct: 310 AANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLR 369
Query: 449 ERYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 508
ERYE+HHKL D+AL AA++L+ +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+E
Sbjct: 370 ERYEQHHKLKIADEALEAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLMNSQLPPAAKE 429
Query: 509 LDKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGP 568
LDKE+RQ++K+KD+AVR+QDF+KAGELRDREM++KTQI ++ + K + S D + P
Sbjct: 430 LDKELRQVLKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKK--ADGTSSTDDS-P 486
Query: 569 VVTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARV 628
+VTE DI HIVASWTGVPV+K++ ES +LL MEETLH R+IGQDEAVKA+ RAIRRARV
Sbjct: 487 IVTEEDIAHIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARV 546
Query: 629 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGS 688
GLKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGS
Sbjct: 547 GLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGS 606
Query: 689 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 748
PPGYVGY EGGQLTEAVRRRPYTVVL DEIEKAHPDV N++LQ+LEDGRLTD+KGRTVDF
Sbjct: 607 PPGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVLNLLLQLLEDGRLTDAKGRTVDF 666
Query: 749 KNTLLIMTSNVGSSVIEKGGRKIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 807
KNTL+I+TSN+GS VIEKGG +GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRL
Sbjct: 667 KNTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRL 726
Query: 808 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPL 867
DE+IVF QL K EVKEIADIML+EVF R+ K I LSVTE+F+DR+VEEGY+PSYGARPL
Sbjct: 727 DEIIVFCQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPL 786
Query: 868 RRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
RRAIMRLLEDS+AE+ L+G+++EGD+ ++D +GKV VL + E LP+A+
Sbjct: 787 RRAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL--AQEKRELLPQAV 838
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/82 (42%), Positives = 57/82 (68%)
Query: 159 RGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLG 218
R +G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+ +G
Sbjct: 9 RHAGREAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMG 68
Query: 219 ADPNNIRAQVIRMVGESNNETA 240
+ + R +V +++G + A
Sbjct: 69 VNLKDARIEVEKIIGRGSGFVA 90
>dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17230491|ref|NP_487039.1| endopeptidase Clp
ATP-binding chain [Nostoc sp. PCC 7120]
gi|25289939|pir||AH2180 endopeptidase Clp ATP-binding
chain [imported] - Nostoc sp. (strain PCC 7120)
Length = 839
Score = 1244 bits (3218), Expect = 0.0
Identities = 632/832 (75%), Positives = 734/832 (87%), Gaps = 10/832 (1%)
Query: 90 AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDA 149
AMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDA
Sbjct: 16 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDA 75
Query: 150 RVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 209
R+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGV
Sbjct: 76 RIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGV 135
Query: 210 AARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANE 269
AARVL++LG D + +R QVIRM+GE+ +A GR K PTL+E+G+NLT++A +
Sbjct: 136 AARVLENLGVDLSKVRTQVIRMLGETAEVSATGQSGR----TKTPTLDEFGSNLTQMATD 191
Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
KLDPVVGR ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLA RIA DVP+ +E
Sbjct: 192 NKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILED 251
Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q N+IL IDEVHTLIGAGAAEGAIDA
Sbjct: 252 KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDA 311
Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
ANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDE+I+IL GLR+
Sbjct: 312 ANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRD 371
Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
RYE+HHKL +D+ALVAA++LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL
Sbjct: 372 RYEQHHKLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLMNSQLPPAAKEL 431
Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
DKE+RQI+KEKD+AVR+QDF++AGELRDREM++K +I A+ + S E G PV
Sbjct: 432 DKELRQILKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNASGTE----GQEPV 487
Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
VTE DI HIVASWTGVPV+K++ ES++LL ME+TLH+R+IGQ++AVKA+ RAIRRARVG
Sbjct: 488 VTEEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVG 547
Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
LKNPNRPIASF+FSGPTGVGK+ELAK+LASY+FGSEEAMIRLDMSE+MERHTVSKLIGSP
Sbjct: 548 LKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSP 607
Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
PGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFK
Sbjct: 608 PGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFK 667
Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
NTLLI+TSN+GS VIEKGG IGF+ D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE
Sbjct: 668 NTLLILTSNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDE 727
Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
+IVFRQL+KLEV EIADIMLKEVF RL K I L V++RF+ R++EEGY PSYGARPLRR
Sbjct: 728 IIVFRQLSKLEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRR 787
Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
AIMRLLEDS+AE++L+G IK+GD +ID D +G V V S E LP+ +
Sbjct: 788 AIMRLLEDSLAEEILSGRIKDGDVALIDIDENGNVQVT--SQQRRELLPQGV 837
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/81 (43%), Positives = 56/81 (68%)
Query: 160 GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGA 219
G G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+ +G
Sbjct: 11 GDGKNAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGV 70
Query: 220 DPNNIRAQVIRMVGESNNETA 240
+ + R +V +++G + A
Sbjct: 71 NLKDARIEVEKIIGRGSGFVA 91
>ref|ZP_00162274.2| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Anabaena variabilis ATCC 29413]
Length = 839
Score = 1242 bits (3213), Expect = 0.0
Identities = 631/832 (75%), Positives = 733/832 (87%), Gaps = 10/832 (1%)
Query: 90 AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDA 149
AMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDA
Sbjct: 16 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDA 75
Query: 150 RVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 209
R+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGV
Sbjct: 76 RIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGV 135
Query: 210 AARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANE 269
AARVL++LG D + +R QVIRM+GE+ +A GR K PTL+E+G+NLT++A +
Sbjct: 136 AARVLENLGVDLSKVRTQVIRMLGETAEVSATGQSGR----TKTPTLDEFGSNLTQMATD 191
Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
KLDPVVGR ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLA RIA DVP+ +E
Sbjct: 192 NKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILED 251
Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q N+IL IDEVHTLIGAGAAEGAIDA
Sbjct: 252 KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDA 311
Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
ANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDE+I+IL GLR+
Sbjct: 312 ANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRD 371
Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
RYE+HHKL +D+ALVAA++LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL
Sbjct: 372 RYEQHHKLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLMNSQLPPAAKEL 431
Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
DKE+RQI+KEKD+AVR+QDF++AGELRDREM++K +I A+ + S E G PV
Sbjct: 432 DKELRQILKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNASGTE----GQEPV 487
Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
VTE DI HIVASWTGVPV+K++ ES++LL ME+TLH+R+IGQ++AVKA+ RAIRRARVG
Sbjct: 488 VTEEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVG 547
Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
LKNPNRPIASF+FSGPTGVGK+ELAK+LASY+FGSEEAMIRLDMSE+MERHTVSKLIGSP
Sbjct: 548 LKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSP 607
Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
PGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFK
Sbjct: 608 PGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFK 667
Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
NTLLI+TSN+GS VIEKGG IGF+ D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE
Sbjct: 668 NTLLILTSNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDE 727
Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
+IVFRQL+K EV EIADIMLKEVF RL K I L V++RF+ R++EEGY PSYGARPLRR
Sbjct: 728 IIVFRQLSKAEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRR 787
Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
AIMRLLEDS+AE++L+G IK+GD +ID D +G V V S E LP+ +
Sbjct: 788 AIMRLLEDSLAEEILSGRIKDGDVALIDIDDNGNVQVT--SQQRRELLPQGV 837
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/81 (43%), Positives = 56/81 (68%)
Query: 160 GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGA 219
G G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+ +G
Sbjct: 11 GDGKNAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGV 70
Query: 220 DPNNIRAQVIRMVGESNNETA 240
+ + R +V +++G + A
Sbjct: 71 NLKDARIEVEKIIGRGSGFVA 91
>ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803] gi|1001555|dbj|BAA10182.1| ATP-dependent Clp
protease regulatory subunit [Synechocystis sp. PCC 6803]
gi|7428212|pir||S76330 endopeptidase Clp (EC 3.4.21.-)
ATP-binding chain C [similarity] - Synechocystis sp.
(strain PCC 6803)
Length = 821
Score = 1238 bits (3202), Expect = 0.0
Identities = 626/822 (76%), Positives = 728/822 (88%), Gaps = 11/822 (1%)
Query: 91 MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDAR
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61 IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120
Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRG-GSSNKMPTLEEYGTNLTKLANE 269
ARVL++LG D + +R QVIRM+GE TA VA G G G K PTL+E+G+NLT++A E
Sbjct: 121 ARVLENLGVDLSKVRTQVIRMLGE----TAEVAAGGGSGGRTKTPTLDEFGSNLTQMAAE 176
Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
GKLDPVVGRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIA D+P+ +E
Sbjct: 177 GKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEE 236
Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q NIIL IDEVHTLIGAGAAEGAIDA
Sbjct: 237 KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNIILVIDEVHTLIGAGAAEGAIDA 296
Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
ANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V+E+I+IL GLRE
Sbjct: 297 ANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRE 356
Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
RYE+HHKL D+AL AA++LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL
Sbjct: 357 RYEQHHKLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKEL 416
Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
DKE+RQI+KEKD+AVRNQDFE+AGEL+DRE ++K QI A+ S ++E D P
Sbjct: 417 DKELRQILKEKDDAVRNQDFEQAGELKDREDEIKKQIRAIA------SSKKAEGDNGEPE 470
Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
VT +I HIVASWTGVPV+K++ ES++LL ME+TLH+R+IGQ++AVKA+ RAIRRARVG
Sbjct: 471 VTSEEIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVG 530
Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
LKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSP
Sbjct: 531 LKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSP 590
Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
PGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFK
Sbjct: 591 PGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFK 650
Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
NTLLIMTSN+GS VIEKGG +GFD D+ +S YNRI+SLV EELK YFRPEFLNRLDE
Sbjct: 651 NTLLIMTSNIGSKVIEKGGGGLGFDFADDQAESQYNRIRSLVNEELKNYFRPEFLNRLDE 710
Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
+IVFRQL K EVKEI++I+L++VF RL KEI L VT++F++R+VEEG++P+YGARPLRR
Sbjct: 711 IIVFRQLNKEEVKEISEILLRDVFARLVEKEISLQVTDKFKERIVEEGFNPAYGARPLRR 770
Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSS 911
AIMRLLED +AE++L+G +KEG ++D D +V+V+ G +
Sbjct: 771 AIMRLLEDVLAEEILSGRLKEGSQALVDIGEDNQVVVIPGET 812
>ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N
terminal [Crocosphaera watsonii WH 8501]
gi|67857006|gb|EAM52246.1| UvrB/UvrC protein:AAA ATPase,
central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
Length = 823
Score = 1223 bits (3165), Expect = 0.0
Identities = 619/825 (75%), Positives = 726/825 (87%), Gaps = 11/825 (1%)
Query: 91 MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDAR
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61 IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120
Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSN-KMPTLEEYGTNLTKLANE 269
ARVL++LG + + +R QVIR +GE TA VA G G K PTL+E+G+NLT+LA E
Sbjct: 121 ARVLENLGVNLSKVRTQVIRQLGE----TAEVAAGGGTPGRTKTPTLDEFGSNLTQLAGE 176
Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
G+LDPVVGRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIA D+P+ +E
Sbjct: 177 GQLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEE 236
Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q N+IL IDEVHTLIGAGAAEGAIDA
Sbjct: 237 KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDA 296
Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
ANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDE+++IL GLRE
Sbjct: 297 ANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETVEILFGLRE 356
Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
RYE+HHKL D+AL AA++LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL
Sbjct: 357 RYEQHHKLKILDEALDAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKEL 416
Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
DKE+R I+K+KD+AVR+QDF++AGELRD+EMD+K QI ++ K E D A P
Sbjct: 417 DKELRTILKQKDDAVRSQDFDRAGELRDQEMDIKEQIRSISTAKK------GEGDSAEPF 470
Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
V +I IVASWTGVPV+K++ ES++LL ME+TLH+R+IGQ++AVKA+ RAIRRARVG
Sbjct: 471 VDAEEIAQIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVG 530
Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
LKNPNRPIASF+FSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSP
Sbjct: 531 LKNPNRPIASFVFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSP 590
Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
PGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFK
Sbjct: 591 PGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFK 650
Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
NTLLIMTSN+GS VIEKGG +GF+ + D+ ++ YNRI++LV EELKQYFRPEFLNRLDE
Sbjct: 651 NTLLIMTSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDE 710
Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
+IVFRQL K EVKEI++I+LKEVF RL KEI L VT++F++R+VEEGY+P+YGARPLRR
Sbjct: 711 IIVFRQLNKEEVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRR 770
Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAP 914
AIMRLLED +AE++L+G + EGD ++D DGKV V++ P
Sbjct: 771 AIMRLLEDVLAEEILSGRVGEGDVAVVDIGEDGKVQVVSNEKQQP 815
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.136 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,486,236,113
Number of Sequences: 2540612
Number of extensions: 63849949
Number of successful extensions: 255274
Number of sequences better than 10.0: 3597
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 2459
Number of HSP's that attempted gapping in prelim test: 244314
Number of HSP's gapped (non-prelim): 7975
length of query: 923
length of database: 863,360,394
effective HSP length: 137
effective length of query: 786
effective length of database: 515,296,550
effective search space: 405023088300
effective search space used: 405023088300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)
Lotus: description of TM0175.11