BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0154.6
         (227 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_507256.1| PREDICTED P0493A04.32 gene product [Oryza sativ...   234  1e-60
dbj|BAC42294.1| unknown protein [Arabidopsis thaliana] gi|306782...   141  1e-32
dbj|BAD29590.1| ferredoxin-like [Oryza sativa (japonica cultivar...   124  2e-27
ref|XP_580298.1| PREDICTED: similar to KIAA1582 protein, partial...    35  1.2

>ref|XP_507256.1| PREDICTED P0493A04.32 gene product [Oryza sativa (japonica
           cultivar-group)] gi|50946509|ref|XP_482782.1| unknown
           protein [Oryza sativa (japonica cultivar-group)]
           gi|42408414|dbj|BAD09597.1| unknown protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 226

 Score =  234 bits (597), Expect = 1e-60
 Identities = 119/220 (54%), Positives = 153/220 (69%), Gaps = 6/220 (2%)

Query: 9   ILSFLHSASTGSAATNTQIKVTNNPADKLVAAINENRTAYKVSELYDNAGLACIALQYIK 68
           +L+ + +A   SAA+    K  NNPAD+LVA IN NRTA K S L DN GL CIALQYIK
Sbjct: 12  LLAAVLAALLLSAASAADSK--NNPADQLVALINSNRTASKASTLDDNQGLGCIALQYIK 69

Query: 69  AYQGDCGAVGGPDAKKPPESQFAEVFAPNCGVKASSLAPITGRFLGCQTKYVHAPEAFSE 128
           AY+G C  VG  ++KKPPE+ FAE FAPNCGV+A++L  ITGR L CQ+ Y    +AF+ 
Sbjct: 70  AYEGQCNQVG--ESKKPPETSFAETFAPNCGVQAATLTKITGRLLACQSNYATPDQAFN- 126

Query: 129 VLIQNQRSLEILHSKNHTQVGAAVTGTDGGSPYFWCVLFSGGKPNSTFAFEGGVAKLTKP 188
            L+ + +S+++LHSKNHT+VGAAV+GT GG PYFWCVLFS GKP ++F  +GGV K  +P
Sbjct: 127 FLVNDAKSIQVLHSKNHTEVGAAVSGTSGGGPYFWCVLFSSGKPTTSFKVDGGVPKSVRP 186

Query: 189 GCFSGANDECSGAHDWSPLSV-MWLFAASVLIALGFAFPL 227
           GCFSG ND+C GA+    +    W   A++L +    F L
Sbjct: 187 GCFSGNNDDCMGANAAVSIGAGTWRLVAALLFSAACVFAL 226


>dbj|BAC42294.1| unknown protein [Arabidopsis thaliana] gi|30678256|ref|NP_171720.2|
           ferredoxin-related [Arabidopsis thaliana]
          Length = 226

 Score =  141 bits (356), Expect = 1e-32
 Identities = 75/195 (38%), Positives = 119/195 (60%), Gaps = 8/195 (4%)

Query: 6   LVVILSFLHSASTGSAATNTQIKVTNNPADKLVAAINENRTAYKVSELYDNAGLACIALQ 65
           L +IL FL  +S  +++     K+  N A ++V+ +N+NRTA K+ +L ++ GL C+ALQ
Sbjct: 8   LELILLFLSLSSVLASS-----KLHGNSAHEMVSILNQNRTARKLGKLNESPGLGCMALQ 62

Query: 66  YIKAYQGDCGAVGGPDAKKPPESQFAEVFAPNCGVKASSLAPITGRFLGCQTKYVHAPEA 125
           Y++  +G+C  V    + + PE  F +VFAPNCGV+  +   ITG  LGC +KY     A
Sbjct: 63  YVELCEGNCN-VNNTLSCEHPEDDFTQVFAPNCGVELPTFGTITGHILGCSSKYAAPEVA 121

Query: 126 FSEVLIQNQRSLEILHSKNHTQVGAAVTGTDGGSPYFWCVLFSGGKPNSTFAFE-GGVAK 184
           FS++L ++  +L +L +++HT+VG  +     G+ +FWC+LFS G  NS+F  E  G   
Sbjct: 122 FSDILFRDSSALSVLRNRSHTEVGVGMARLHKGT-FFWCLLFSDGVKNSSFVLEDNGRGI 180

Query: 185 LTKPGCFSGANDECS 199
             + GC+SG+   CS
Sbjct: 181 KQRTGCYSGSAFPCS 195


>dbj|BAD29590.1| ferredoxin-like [Oryza sativa (japonica cultivar-group)]
           gi|50251426|dbj|BAD28464.1| ferredoxin-like [Oryza
           sativa (japonica cultivar-group)]
          Length = 230

 Score =  124 bits (311), Expect = 2e-27
 Identities = 74/175 (42%), Positives = 93/175 (52%), Gaps = 14/175 (8%)

Query: 28  KVTNNPADKLVAAINENRTAYKVSELYDNAGLACIALQYIKAYQGDCGAVG------GPD 81
           K+  NPA+ LVA +N NRTA K+  L  +AGL C+ALQYI     DC  +G         
Sbjct: 24  KIHGNPANDLVALVNANRTATKLPHLRTSAGLGCMALQYI----SDCIGIGIGCAGDNTV 79

Query: 82  AKKPPESQFAEVFAPNCGVKASSLAPITGRFLGCQTKYVHAPEAFSEVLIQNQRSL---E 138
           A +PPE+   EV+A NCGV+  ++  ITGR LGC  +   A  A   VL  +  S     
Sbjct: 80  ACQPPEAHITEVYAANCGVELPTVDVITGRLLGCHRQRSDAEAALEAVLSGSGNSTAARA 139

Query: 139 ILHSKNHTQVGAAVTGTDGGSPYFWCVLFSGGKPNSTFAFE-GGVAKLTKPGCFS 192
           ++  K HTQVGA         P+FWC+LFS G  NSTF  E  G       GCFS
Sbjct: 140 VIRGKEHTQVGAGFDRAHRRGPFFWCLLFSSGSANSTFLLEAAGKGVHQSHGCFS 194


>ref|XP_580298.1| PREDICTED: similar to KIAA1582 protein, partial [Bos taurus]
          Length = 1746

 Score = 35.4 bits (80), Expect = 1.2
 Identities = 37/134 (27%), Positives = 53/134 (38%), Gaps = 15/134 (11%)

Query: 73  DCGA---VGGPDAKKPPESQFAEVFAPNCGVKASSLAP--ITGRFLGCQTKYVHAPEAFS 127
           D GA   + G + +   E       A NCG + SS+A     G F G QTK  +     +
Sbjct: 252 DAGAWPSITGAETESASECTTDTDSASNCGSENSSMATGSAQGSFTG-QTKKTNGNNGSN 310

Query: 128 EVLIQNQRSLEILHSKNHTQVGAAVTGTDGGSPYFWCVLFSGGKPNSTFAFEGGVAKLTK 187
             L+QN  +   L        GA    ++GG+   W V  S G   +  +  GG  K+  
Sbjct: 311 GTLVQNPSAQSAL--------GAGGANSNGGAARVWGVAASAGSGLAHCSLGGGDGKMDN 362

Query: 188 PGCFSGANDECSGA 201
                G +  C GA
Sbjct: 363 M-IGDGRSQNCWGA 375


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.318    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 402,279,737
Number of Sequences: 2540612
Number of extensions: 17103988
Number of successful extensions: 33597
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 33588
Number of HSP's gapped (non-prelim): 4
length of query: 227
length of database: 863,360,394
effective HSP length: 124
effective length of query: 103
effective length of database: 548,324,506
effective search space: 56477424118
effective search space used: 56477424118
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)