BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0151.11
(1562 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 881 0.0
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 880 0.0
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 874 0.0
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 870 0.0
gb|AAC49502.1| Pol [Zea mays] gi|7489803|pir||T04112 pol protein... 868 0.0
gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana] 860 0.0
gb|AAO73525.1| gag-pol polyprotein [Glycine max] 860 0.0
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 858 0.0
gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 838 0.0
gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cult... 837 0.0
gb|AAL35396.1| Opie2a pol [Zea mays] 830 0.0
emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa (japonica cultivar... 818 0.0
ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (jap... 813 0.0
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 810 0.0
ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultiva... 810 0.0
ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica... 809 0.0
gb|AAP53706.1| hypothetical protein [Oryza sativa (japonica cult... 795 0.0
ref|XP_468929.1| putative polyprotein [Oryza sativa (japonica cu... 793 0.0
ref|NP_912905.1| unnamed protein product [Oryza sativa (japonica... 754 0.0
gb|AAW57789.1| putative polyprotein [Oryza sativa (japonica cult... 751 0.0
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 881 bits (2276), Expect = 0.0
Identities = 452/931 (48%), Positives = 613/931 (65%), Gaps = 12/931 (1%)
Query: 595 MLQISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTIC 654
++ SL A K + WYLDSGCSRHMTG ++ V FG KGKI+G G +
Sbjct: 549 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLV 607
Query: 655 VDSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNI 714
D P ++ VLLV GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N
Sbjct: 608 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 667
Query: 715 YKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDAL 774
Y E + CL S +E +WH+R GH +R + ++ VRG+PNLK +
Sbjct: 668 YLWTPQETSYSST-CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 726
Query: 775 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTW 834
C CQ GK K+ + +TSR LELLH+DL GP++ ES+GGKRY V+VDD+SR+TW
Sbjct: 727 CGECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 786
Query: 835 VKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFES-----LFDSYGIAHDFSC 889
V F+ K E+ VF ++Q EK C I R+RSDHG EFE+ S GI H+FS
Sbjct: 787 VNFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSA 846
Query: 890 PRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPY 949
TPQQNG+VERKNRTLQE AR ML + + AEA+NTACYI NR+++R T Y
Sbjct: 847 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 906
Query: 950 ELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKT 1009
E+WK KP++ +FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T
Sbjct: 907 EIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 966
Query: 1010 IEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTL 1069
+ ESI+V DD + + + E L NV+D K+ E AE D +E+ +
Sbjct: 967 VMESINVVVDDLSPARKKDVEEDVRTLGDNVADAAKSGENAE-NSDSATDESNINQPDKR 1025
Query: 1070 KKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEALQDKDWI 1129
+RI HPKELI+G+ + V TRS E ++S VS IEPK++ EAL D+ WI
Sbjct: 1026 SSTRIQKMHPKELIIGDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWI 1081
Query: 1130 LAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQE 1189
AM+EEL QF +N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q E
Sbjct: 1082 NAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIE 1141
Query: 1190 GIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFEDE 1249
G+D+ ETFAPVARLE+IRLL+ + L+QMDVKSAFLNGY++EEVYV QP GF D
Sbjct: 1142 GVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADP 1201
Query: 1250 KKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIY 1309
PDHV++LKK+LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I QIY
Sbjct: 1202 THPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIY 1261
Query: 1310 VDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELL 1369
VDDI+FG + + + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QS+Y K ++
Sbjct: 1262 VDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIV 1321
Query: 1370 KKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSVHLCA 1429
KKF M ++ +TP L K++ V Q LYR MIGSLLYLTASRPDI ++V +CA
Sbjct: 1322 KKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCA 1381
Query: 1430 RFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTSGN 1489
R+Q++P+ +HLT +KRIL+Y+ GT++ G+MY S L GYCDA +AG +RKSTSG
Sbjct: 1382 RYQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGG 1441
Query: 1490 CQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
C +LG+NL+SW SK+Q+ ++LSTAEAEYI+A
Sbjct: 1442 CFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1472
Score = 140 bits (352), Expect = 4e-31
Identities = 97/350 (27%), Positives = 164/350 (46%), Gaps = 34/350 (9%)
Query: 11 KPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTA 64
+PP+ DG +EYWK RM +F D+ W ++ G+E P +D +GK P + T
Sbjct: 12 RPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTK 71
Query: 65 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLI 124
++ +L + KA L + + ++ I AK +E LK++HEG KVK S+ L
Sbjct: 72 EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMSRLQLLA 131
Query: 125 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIE 184
K+E+ M+ E I + + L + T + V +++R LP+ + VT+IE
Sbjct: 132 TKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIE 191
Query: 185 LTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESE 244
+D+ NM ++ELI L+ EL S+ + + K++A S E EE+E +
Sbjct: 192 EAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDE-----------GEEDEYD 240
Query: 245 EASEDSDEDELTLISKRLNRIWKHRQSKYK--------GSGKAKGKSESSGQKKSSLKEV 296
+++ + + L+ K+ N++ + K K + S K S K +
Sbjct: 241 LDTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRSDVKPSHSKGI 300
Query: 297 TCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESE-DVDSD 345
C C+ GH ++CP K K +K L V ++ESE + DSD
Sbjct: 301 QCHGCEGYGHIIAECPTHLK--------KHRKGLSVCQSDTESEQESDSD 342
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 880 bits (2275), Expect = 0.0
Identities = 452/931 (48%), Positives = 613/931 (65%), Gaps = 12/931 (1%)
Query: 595 MLQISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTIC 654
++ SL A K + WYLDSGCSRHMTG ++ V FG KGKI+G G +
Sbjct: 547 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLV 605
Query: 655 VDSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNI 714
D P ++ VLLV GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N
Sbjct: 606 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 665
Query: 715 YKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDAL 774
Y E + CL S +E +WH+R GH +R + ++ VRG+PNLK +
Sbjct: 666 YLWTPQETSYSST-CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 724
Query: 775 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTW 834
C CQ GK K+ + +TSR LELLH+DL GP++ ES+GGKRY V+VDD+SR+TW
Sbjct: 725 CGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 784
Query: 835 VKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFES-----LFDSYGIAHDFSC 889
VKF+ K E+ VF ++Q EK C I R+RSDHG EFE+ S GI H+FS
Sbjct: 785 VKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEFCTSEGITHEFSA 844
Query: 890 PRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPY 949
TPQQNG+VERKNRTLQE AR ML + + AEA+NTACYI NR+++R T Y
Sbjct: 845 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 904
Query: 950 ELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKT 1009
E+WK KP++ +FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T
Sbjct: 905 EIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 964
Query: 1010 IEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTL 1069
+ ESI+V DD + + + E NV+D K+ E AE D +E+ +
Sbjct: 965 VMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAE-NSDSATDESNINQPDKR 1023
Query: 1070 KKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEALQDKDWI 1129
+RI HPKELI+G+ + V TRS E ++S VS IEPK++ EAL D+ WI
Sbjct: 1024 SSTRIQKMHPKELIIGDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWI 1079
Query: 1130 LAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQE 1189
AM+EEL QF +N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q E
Sbjct: 1080 NAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIE 1139
Query: 1190 GIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFEDE 1249
G+D+ ETFAPVARLE+IRLL+ + L+QMDVKSAFLNGY++EEVYV QP GF D
Sbjct: 1140 GVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADP 1199
Query: 1250 KKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIY 1309
PDHV++LKK+LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I QIY
Sbjct: 1200 THPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIY 1259
Query: 1310 VDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELL 1369
VDDI+FG + + + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QS+Y K ++
Sbjct: 1260 VDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIV 1319
Query: 1370 KKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSVHLCA 1429
KKF M ++ +TP L K++ V Q LYR MIGSLLYLTASRPDI ++V +CA
Sbjct: 1320 KKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCA 1379
Query: 1430 RFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTSGN 1489
R+Q++P+ +HLT +KRIL+Y+ GT++ G+MY S L GYCDA +AG +RKSTSG
Sbjct: 1380 RYQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGG 1439
Query: 1490 CQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
C +LG+NL+SW SK+Q+ ++LSTAEAEYI+A
Sbjct: 1440 CFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1470
Score = 140 bits (352), Expect = 4e-31
Identities = 97/350 (27%), Positives = 164/350 (46%), Gaps = 34/350 (9%)
Query: 11 KPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTA 64
+PP+ DG +EYWK RM +F D+ W ++ G+E P +D +GK P + T
Sbjct: 12 RPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTK 71
Query: 65 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLI 124
++ +L + KA L + + ++ I AK +E LK++HEG KVK S+ L
Sbjct: 72 EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKISRLQLLA 131
Query: 125 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIE 184
K+E+ M+ E I + + L + T + V +++R LP+ + VT+IE
Sbjct: 132 TKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIE 191
Query: 185 LTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESE 244
+D+ NM ++ELI L+ EL S+ + + K++A S E EE+E +
Sbjct: 192 EAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDE-----------GEEDEYD 240
Query: 245 EASEDSDEDELTLISKRLNRIWKHRQSKYK--------GSGKAKGKSESSGQKKSSLKEV 296
+++ + + L+ K+ N++ + K K + S K S K +
Sbjct: 241 LNTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKKSDVKPSHSKGI 300
Query: 297 TCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESE-DVDSD 345
C C+ GH ++CP K K +K L V ++ESE + DSD
Sbjct: 301 QCHGCEGYGHIIAECPTHLK--------KHRKGLSVCQSDTESEQESDSD 342
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 874 bits (2258), Expect = 0.0
Identities = 449/931 (48%), Positives = 611/931 (65%), Gaps = 12/931 (1%)
Query: 595 MLQISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTIC 654
++ SL A K + WYLDSGCSRHMTG ++ V FG KGKI+G G +
Sbjct: 549 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLV 607
Query: 655 VDSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNI 714
D P ++ VLLV GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N
Sbjct: 608 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 667
Query: 715 YKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDAL 774
Y E + CL S +E +WH+R GH +R + ++ + VRG+PNLK +
Sbjct: 668 YLWTPQETSYSST-CLSSKEDEVRIWHQRFGHLHLRGMKKILDKSAVRGIPNLKIEEGRI 726
Query: 775 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTW 834
C CQ GK K+ + +TSR LELLH+DL GP++ ES+GGKRY V+VDD+SR+TW
Sbjct: 727 CGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 786
Query: 835 VKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFES-----LFDSYGIAHDFSC 889
V F+ K + VF ++Q EK C I R+RSDHG EFE+ S GI H+FS
Sbjct: 787 VNFIREKSGTFEVFKKLSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSA 846
Query: 890 PRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPY 949
TPQQNG+VERKNRTLQE AR ML + + AEA+NTACYI NR+++R T Y
Sbjct: 847 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 906
Query: 950 ELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKT 1009
E+WK KP++ +FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T
Sbjct: 907 EIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 966
Query: 1010 IEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTL 1069
+ ESI+V DD + + + E NV+D K+ E AE D +E+ +
Sbjct: 967 VMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAE-NSDSATDESNINQPDKR 1025
Query: 1070 KKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEALQDKDWI 1129
+RI HPKELI+G+ + V TRS E ++S VS IEPK++ EAL D+ WI
Sbjct: 1026 SSTRIQKMHPKELIIGDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWI 1081
Query: 1130 LAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQE 1189
AM+EEL QF +N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q E
Sbjct: 1082 NAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIE 1141
Query: 1190 GIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFEDE 1249
G+D+ ETFAPVARLE+IRLL+ + L+QMDVKSAFLNGY++EEVYV QP GF D
Sbjct: 1142 GVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADP 1201
Query: 1250 KKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIY 1309
PDHV++LKK+LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I QIY
Sbjct: 1202 THPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIY 1261
Query: 1310 VDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELL 1369
VDDI+FG + + + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QS+Y K ++
Sbjct: 1262 VDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIV 1321
Query: 1370 KKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSVHLCA 1429
KKF M ++ +TP L K++ V QK YR MIGSLLYLTASRPDI ++V +CA
Sbjct: 1322 KKFGMENASHKRTPAPTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCA 1381
Query: 1430 RFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTSGN 1489
R+Q++P+ +HL +KRIL+Y+ GT++ G+MY S L GYCDA +AG +RKSTSG
Sbjct: 1382 RYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGG 1441
Query: 1490 CQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
C +LG+NL+SW SK+Q+ ++LSTAEAEYI+A
Sbjct: 1442 CFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1472
Score = 138 bits (347), Expect = 2e-30
Identities = 97/350 (27%), Positives = 162/350 (45%), Gaps = 34/350 (9%)
Query: 11 KPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTA 64
+PP+ DG +EYWK RM +F D+ W ++ G+E P +D +GK P + T
Sbjct: 12 RPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTK 71
Query: 65 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLI 124
++ +L + KA L + + ++ I AK E LK +HEG KVK S+ L
Sbjct: 72 EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDACEILKSTHEGTSKVKMSRLQLLA 131
Query: 125 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIE 184
K+E+ M+ E I + + L + T + V +++R LP+ + VT+IE
Sbjct: 132 TKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIE 191
Query: 185 LTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESE 244
+D+ NM ++ELI L+ EL S+ + + K++A S E EE+E +
Sbjct: 192 EAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDE-----------GEEDEYD 240
Query: 245 EASEDSDEDELTLISKRLNRIWKHRQSKYK--------GSGKAKGKSESSGQKKSSLKEV 296
+++ + + L+ K+ N++ + K K + S K S K +
Sbjct: 241 LDTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRSDVKPSHSKGI 300
Query: 297 TCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESE-DVDSD 345
C C+ GH ++CP K K +K L V ++ESE + DSD
Sbjct: 301 QCHGCEGYGHIIAECPTHLK--------KHRKGLSVCQSDTESEQESDSD 342
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 870 bits (2249), Expect = 0.0
Identities = 450/933 (48%), Positives = 612/933 (65%), Gaps = 16/933 (1%)
Query: 595 MLQISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTIC 654
++ SL A K + WYLDSGCSRHMTG ++ V FG KGKI G G +
Sbjct: 550 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLV 608
Query: 655 VDSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNI 714
+ P ++ VLLV GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N
Sbjct: 609 HEGLPSLNKVLLVKGLTVNLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 668
Query: 715 YKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDAL 774
Y E + + CL S +E +WH+R GH +R + ++ VRG+PNLK +
Sbjct: 669 YLWTPQE-SSHSSTCLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 727
Query: 775 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTW 834
C CQ GK K+ + +TSR LELLH+DL GP++ ES+GGKRY V+VDD+SR+TW
Sbjct: 728 CGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 787
Query: 835 VKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFES-----LFDSYGIAHDFSC 889
V F+ K ++ VF ++Q EK C I R+RSDHG EFE+ S GI H+FS
Sbjct: 788 VNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSA 847
Query: 890 PRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPY 949
TPQQNG+VERKNRTLQE AR ML + + AEA+NTACYI NR+++R T Y
Sbjct: 848 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 907
Query: 950 ELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKT 1009
E+WK KP + +FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T
Sbjct: 908 EIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 967
Query: 1010 IEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTL 1069
+ ESI+V DD + + + E NV+D K+ E AE + +E P+ +Q
Sbjct: 968 VMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDE---PNINQPD 1024
Query: 1070 KKS--RITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEALQDKD 1127
K+ RI HPKELI+G+ + V TRS E ++S VS IEPK++ EAL D+
Sbjct: 1025 KRPSIRIQKMHPKELIIGDPNRGVTTRSR----EIEIVSNSCFVSKIEPKNVKEALTDEF 1080
Query: 1128 WILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQ 1187
WI AM+EEL QF +N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q
Sbjct: 1081 WINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQ 1140
Query: 1188 QEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFE 1247
EG+D+ ETFAPVARLE+IRLL+ + L+QMDVKSAFLNGY++EE YV QP GF
Sbjct: 1141 IEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFV 1200
Query: 1248 DEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQ 1307
D PDHV++LKK+LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I Q
Sbjct: 1201 DPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQ 1260
Query: 1308 IYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKE 1367
IYVDDI+FG + + + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QSKY K
Sbjct: 1261 IYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKN 1320
Query: 1368 LLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSVHL 1427
++KKF M ++ +TP L K++ V Q LYR MIGSLLYLTASRPDI ++V +
Sbjct: 1321 IVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGV 1380
Query: 1428 CARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTS 1487
CAR+Q++P+ +HL +KRIL+Y+ GT++ G+MY S L GYCDA +AG +RKSTS
Sbjct: 1381 CARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTS 1440
Query: 1488 GNCQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
G C +LG+NL+SW SK+Q+ ++LSTAEAEYI+A
Sbjct: 1441 GGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1473
Score = 139 bits (349), Expect = 1e-30
Identities = 98/351 (27%), Positives = 164/351 (45%), Gaps = 35/351 (9%)
Query: 11 KPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTA 64
+PP+ DG +EYWK RM +F D+ W ++ G+E P +D +GK P + T
Sbjct: 12 RPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTK 71
Query: 65 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLI 124
++ +L + KA L + + ++ I AK +E LK +HEG KVK S+ L
Sbjct: 72 EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLA 131
Query: 125 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIE 184
K+E+ M+ E I + + L + T + V +++R LP+ + VT+IE
Sbjct: 132 TKFENLKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIE 191
Query: 185 LTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESE 244
+D+ NM ++ELI L+ EL S+ + + K++A S E EE+E +
Sbjct: 192 EAQDICNMRVDELIGSLQTFELGLSDRTEKKSKNLAFVSNDE-----------GEEDEYD 240
Query: 245 EASEDSDEDELTLISKRLNRIWKHRQSKYK--------GSGKAKGKSESSGQKKSSLKEV 296
+++ + + + K+ N++ + K K S +K S K +
Sbjct: 241 LDTDEGLTNAVVFLGKQFNKVLNRMDRRQKPHVRNISLDIRKGSEYQRKSDEKPSHSKGI 300
Query: 297 TCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMV-TFDESESE-DVDSD 345
C C+ GH K++CP K K +K L V D++ESE + DSD
Sbjct: 301 QCRGCEGYGHIKAECPTHLK--------KQRKGLSVCRSDDTESEQESDSD 343
>gb|AAC49502.1| Pol [Zea mays] gi|7489803|pir||T04112 pol protein homolog - maize
retrotransposon Opie-2
Length = 1068
Score = 868 bits (2243), Expect = 0.0
Identities = 470/963 (48%), Positives = 609/963 (62%), Gaps = 53/963 (5%)
Query: 608 SWYLDSGCSRHMTGESRMFQE-LKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDNVL 665
SW +DSGC+ HMTGE +MF +K K + + FG +GK+ G G I + + I NV
Sbjct: 10 SWIIDSGCTNHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAISNEHSISNVF 69
Query: 666 LVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQ 725
LV+ L +NLLS+SQL + GY+ +F + DGS+ F +Y + ++ EA
Sbjct: 70 LVESLGYNLLSVSQLCNMGYNCLFTNIDVSVFRRCDGSLAFKGVLDGKLYLVDFAKEEAG 129
Query: 726 NVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGKFTK 785
CL++ W+WHRRL H M+ + +L K V GL N++F D C ACQ GK
Sbjct: 130 LDACLIAKTSMGWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFEKDRPCAACQAGKQVG 189
Query: 786 VPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESH 845
KNV++TSRPLE+LH+DLFGPV SIGG +YG+VIVDD+SR+TWV FL K E+
Sbjct: 190 GSHHTKNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQEKSETQ 249
Query: 846 VVFSTFIAQVQNEKACRIVRVRSDHGGEFESL-----FDSYGIAHDFSCPRTPQQNGVVE 900
F+ + QNE ++ ++RSD+G EF++L + GI H+FS P TPQQNGVVE
Sbjct: 250 GTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVE 309
Query: 901 RKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNIS 960
RKNRTL +MARTML E + F EAVNTAC+ NR+ + IL T YEL KPN+S
Sbjct: 310 RKNRTLIDMARTMLGEFKTPECFWTEAVNTACHAINRVYLHRILKNTSYELLTGNKPNVS 369
Query: 961 YFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDD 1020
YF FG CY+L K R KF K+ + LLGY +K +R +N + +E S V FD+
Sbjct: 370 YFRVFGSKCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSGDVVFDE 429
Query: 1021 KLDSDQSKLV-------EKFADLSINVSDKGKAPEEAEPEEDEP---------------- 1057
S + ++V E +I G+ + + E ++P
Sbjct: 430 TNGSPREQVVDCDDVDEEDIPTAAIRTMAIGEVRPQEQDEREQPSPSTMVHPPTQDDEQV 489
Query: 1058 -----------------EEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPY 1100
EEEA P+ T ++ I HP + ILG+ + V TRS +
Sbjct: 490 HQQEVCDQGGAQDDHVLEEEAQPA-PPTQVRAMIQRDHPVDQILGDISKGVTTRSRLVNF 548
Query: 1101 EETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTK 1160
E VS IEP ++EAL D DW+LAM+EELN F +N+VW+LV +P+ +V+GTK
Sbjct: 549 CEH----NSFVSSIEPFRVEEALLDPDWVLAMQEELNNFKRNEVWTLVPRPKQ-NVVGTK 603
Query: 1161 WVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVL 1220
WVFRNK +E+G V RNKARLVA+GY+Q G+D+ ETFAPVARLE+IR+L++++ +H+ L
Sbjct: 604 WVFRNKQDERGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHHSFRL 663
Query: 1221 HQMDVKSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFL 1280
+QMDVKSAFLNG I EEVYV QP GFEDE+ PDHV KL K+LYGLKQAPRAWYE L FL
Sbjct: 664 YQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECLRDFL 723
Query: 1281 LENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMG 1340
+ N F GK D TLF KT D+ + QIYVDDIIFGS NQ C+EFS +M +FEMSMMG
Sbjct: 724 IANAFKVGKADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEMSMMG 783
Query: 1341 ELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVC 1400
EL YFLG QV Q +GT+I Q+KYT++LLK+F M ++ AKTPM + V
Sbjct: 784 ELNYFLGFQVKQLKDGTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVD 843
Query: 1401 QKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMY 1460
QK YR MIGSLLYL ASRPDI+ SV +CARFQSDP+E HL A+KRILRYL T GL Y
Sbjct: 844 QKAYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCFGLWY 903
Query: 1461 KKTSEYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
K S + L GY D+ YAG + +RKSTSG CQFLG +LVSW SK+Q+++ALSTAEAEY++A
Sbjct: 904 PKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAEYVAA 963
Query: 1521 AIC 1523
C
Sbjct: 964 GQC 966
>gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
Length = 1643
Score = 860 bits (2223), Expect = 0.0
Identities = 441/939 (46%), Positives = 603/939 (63%), Gaps = 32/939 (3%)
Query: 609 WYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLLVD 668
WY DSG SRHMTG V FGG KG+I G G + P + NV V+
Sbjct: 614 WYFDSGASRHMTGSQANLNNYSSVKESNVMFGGGAKGRIKGKGDLTETEKPHLTNVYFVE 673
Query: 669 GLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVK 728
GLT NL+S+SQL D+G V FN+ C A ++ + + L + NN Y ++
Sbjct: 674 GLTANLISVSQLCDEGLTVSFNKVKCWATNERNQNTLTGVRTGNNCYMWEEPKI------ 727
Query: 729 CLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPF 788
CL + E+ +WH+RLGH + R +S+L +VRG+P LK +C AC +GK +V
Sbjct: 728 CLRAEKEDPVLWHQRLGHMNARSMSKLVNKEMVRGVPELKHIEKIVCGACNQGKQIRVQH 787
Query: 789 KAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHVVF 848
K + T++ L+L+H+DL GP++TESI GKRY V+VDD+SR+ WV+F+ K E+ F
Sbjct: 788 KRVEGIQTTQVLDLIHMDLMGPMQTESIAGKRYVFVLVDDFSRYAWVRFIREKSETANSF 847
Query: 849 STFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYGIAHDFSCPRTPQQNGVVERKN 903
Q++NEK I ++RSD GGEF S +S GI H +S PRTPQ NGVVERKN
Sbjct: 848 KILALQLKNEKKMGIKQIRSDRGGEFMNEAFNSFCESQGIFHQYSAPRTPQSNGVVERKN 907
Query: 904 RTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFH 963
RTLQEMAR M+ G+ + F AEA++TACY+ NR+ VR +KTPYE+WK KPN+SYF
Sbjct: 908 RTLQEMARAMIHGNGVPEKFWAEAISTACYVINRVYVRLGSDKTPYEIWKGKKPNLSYFR 967
Query: 964 PFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKLD 1023
FGCVCY++N KD+L KFD++S + LGY+ S +R +N IEES++V FDD
Sbjct: 968 VFGCVCYIMNDKDQLGKFDSRSEEGFFLGYATNSLAYRVWNKQRGKIEESMNVVFDDGSM 1027
Query: 1024 SDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTLKKSRITAAHPKELI 1083
+ +V + ++S+ ++ ++G + + +++ H + I
Sbjct: 1028 PELQIIVRNRNEPQTSISNNHGEERNDNQFDNGDINKSGEESDEEVPPAQVHRDHASKDI 1087
Query: 1084 LGNKD-------------------EPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEALQ 1124
+G+ + R ++F +EE + S VS++EPK++ EAL+
Sbjct: 1088 IGDPSGERVTRGVKQDYRQLAGIKQKHRVMASFACFEEIMFSC--FVSIVEPKNVKEALE 1145
Query: 1125 DKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQG 1184
D WILAMEEEL +FS++ VW LV +P V+VIGTKW+F+NK +E G++ RNKARLVAQG
Sbjct: 1146 DHFWILAMEEELEEFSRHQVWDLVPRPPQVNVIGTKWIFKNKFDEVGNITRNKARLVAQG 1205
Query: 1185 YSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPL 1244
Y+Q EG+D+ ETFAPVARLE IR L+ + LHQMDVK AFLNG I EEVYV QP
Sbjct: 1206 YTQVEGLDFDETFAPVARLECIRFLLGTACGMGFKLHQMDVKCAFLNGIIEEEVYVEQPK 1265
Query: 1245 GFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDIL 1304
GFE+ + P++V+KLKK+LYGLKQAPRAWYERL++FL+ + RG VD TLF K I+
Sbjct: 1266 GFENLEFPEYVYKLKKALYGLKQAPRAWYERLTTFLIVQGYTRGSVDKTLFVKNDVHGII 1325
Query: 1305 IVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKY 1364
I+QIYVDDI+FG + L K F + M EF MSM+GELKYFLG+Q++QT EG I QS Y
Sbjct: 1326 IIQIYVDDIVFGGTSDKLVKTFVKTMTTEFRMSMVGELKYFLGLQINQTDEGITISQSTY 1385
Query: 1365 TKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFS 1424
+ L+K+F M S A TPM T L K++K KV +KLYRGMIGSLLYLTA+RPD+ S
Sbjct: 1386 AQNLVKRFGMCSSKPAPTPMSTTTKLFKDEKGVKVDEKLYRGMIGSLLYLTATRPDLCLS 1445
Query: 1425 VHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERK 1484
V LCAR+QS+P+ +HL A+KRI++Y+ GT N GL Y + + L GYCDA + G+ +R+
Sbjct: 1446 VGLCARYQSNPKASHLLAVKRIIKYVSGTINYGLNYTRDTSLVLVGYCDADWGGNLDDRR 1505
Query: 1485 STSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAIC 1523
ST+G FLGSNL+SW SK+Q+ ++LS+ ++EYI+ C
Sbjct: 1506 STTGGVFFLGSNLISWHSKKQNCVSLSSTQSEYIALGSC 1544
Score = 121 bits (303), Expect = 2e-25
Identities = 86/358 (24%), Positives = 172/358 (48%), Gaps = 37/358 (10%)
Query: 11 KPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPV--DADGKKIPRSE--MTADQ 66
K M + + +WK +M + G + W G++ PV +G+ + ++E T +
Sbjct: 12 KAIMLEKGNYGHWKVKMRALIRGLGKEAWIATSVGWKAPVVKGENGEDVLKTEDQWTDAE 71
Query: 67 KKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQK 126
+ + + +A +++ ++++ ++++I + E AK ++ L ++EG VK S+ L +
Sbjct: 72 EAKATANSRALSLIFNSVNQNQFKRIQNCESAKEAWDKLAKAYEGTSSVKRSRIDMLASQ 131
Query: 127 YESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELT 186
+E+ M+ +E+IEE + + + L K Y K V +++RCLP + T++ +
Sbjct: 132 FENLTMDESENIEEFSGKISAIASEAHNLGKKYKDKKLVKKLLRCLPSRFESKRTAMGTS 191
Query: 187 RDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEA 246
D + + EE++ +L+ +EL+ + + K +AL SEK + ++ K
Sbjct: 192 LDTDTIDFEEVVGMLQAYELEITSGKGGYSKGVALAVSSEKNEIQELK------------ 239
Query: 247 SEDSDEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCFECKESGH 306
DS S+ + R+ K ++ +GS + + + K+S E+ C EC+ GH
Sbjct: 240 --DSMSMMAKNFSRAMKRVEKRGFARNQGSDRDRDRDRDRNSKRS---EIQCHECQGYGH 294
Query: 307 YKSDCPKLK-KDKKPKK--------------HFKTKKSLMVTFDESESEDVDSDGESK 349
K++CP LK KD K + K +S + D S+S+D DS+ + K
Sbjct: 295 IKAECPSLKRKDLKCSECRGIGHTKFDCIGSKSKPDRSYIAESD-SDSDDEDSEEDVK 351
>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 860 bits (2221), Expect = 0.0
Identities = 447/933 (47%), Positives = 605/933 (63%), Gaps = 16/933 (1%)
Query: 595 MLQISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTIC 654
++ SL A K + WYLDSGCSRHMTG ++ V FG KGKI G G +
Sbjct: 549 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLV 607
Query: 655 VDSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNI 714
D P ++ VLLV GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N
Sbjct: 608 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 667
Query: 715 YKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDAL 774
Y E + CL S +E +WH+R GH +R + ++ VRG+PNLK +
Sbjct: 668 YLWTPQETSYSST-CLSSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 726
Query: 775 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTW 834
C CQ GK K+ + +TS LELLH+DL GP++ ES+GGKRY V+VDD+SR+TW
Sbjct: 727 CGECQIGKQVKMSHQKLQHQTTSMVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 786
Query: 835 VKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFES-----LFDSYGIAHDFSC 889
V F+ K ++ VF ++Q EK C I R+RSDHG EFE+ S GI H+FS
Sbjct: 787 VNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSA 846
Query: 890 PRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPY 949
TPQQNG+VERKNRTLQE R ML + + AEA+NTACYI NR+++R T Y
Sbjct: 847 AITPQQNGIVERKNRTLQEATRVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 906
Query: 950 ELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKT 1009
E+WK KP + +FH FG CY+L +++ K D KS + LGYS S+ +R +N+ +T
Sbjct: 907 EIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 966
Query: 1010 IEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTL 1069
+ ESI+V DD + + + E NV+D K+ E AE + +E P+ +Q
Sbjct: 967 VMESINVVVDDLTPARKKDVEEDVRTSEDNVADTAKSAENAEKSDSTTDE---PNINQPD 1023
Query: 1070 KKS--RITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEALQDKD 1127
K RI PKELI+G+ + V TRS E ++S VS IEPK++ EAL D+
Sbjct: 1024 KSPFIRIQKMQPKELIIGDPNRGVTTRSR----EIEIVSNSCFVSKIEPKNVKEALTDEF 1079
Query: 1128 WILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQ 1187
WI AM+EEL QF +N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q
Sbjct: 1080 WINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQ 1139
Query: 1188 QEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFE 1247
EG+D+ ETFAPVARLE+IRLL+ + L+QMDVKSAFLNGY++EE YV QP GF
Sbjct: 1140 IEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFV 1199
Query: 1248 DEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQ 1307
D DHV++LKK+LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I Q
Sbjct: 1200 DPTHLDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQ 1259
Query: 1308 IYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKE 1367
IYVDDI+FG + + + F MQ+EFEMS++GEL YFLG+QV Q + ++ QSKY K
Sbjct: 1260 IYVDDIVFGGMSNEMLRHFVPQMQSEFEMSLVGELHYFLGLQVKQMEDSIFLSQSKYAKN 1319
Query: 1368 LLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSVHL 1427
++KKF M ++ +TP L K++ V Q LYR MIGSLLYLTASRPDI F+V +
Sbjct: 1320 IVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQNLYRSMIGSLLYLTASRPDITFAVGV 1379
Query: 1428 CARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTS 1487
CAR+Q++P+ +HL +KRIL+Y+ GT++ G+MY S+ L GYCDA +AG +RK TS
Sbjct: 1380 CARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSADDRKCTS 1439
Query: 1488 GNCQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
G C +LG+NL+SW SK+Q+ ++LSTAEAEYI+A
Sbjct: 1440 GGCFYLGTNLISWFSKKQNCVSLSTAEAEYIAA 1472
Score = 135 bits (340), Expect = 1e-29
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 11 KPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTA 64
+PP+ DG +EYWK RM +F D+ W ++ G+E P +D +GK P + T
Sbjct: 12 RPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTK 71
Query: 65 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIF-ESLKMSHEGNKKVKESKALSL 123
++ +L + KA L + + ++ I AK E LK +HEG KVK S+ L
Sbjct: 72 EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDACGEILKTTHEGTSKVKMSRLQLL 131
Query: 124 IQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSI 183
K+E+ M+ E I + + L + T + V +++R LP+ + VT+I
Sbjct: 132 ATKFENLKMKEEECIHDFHMNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAI 191
Query: 184 ELTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEES 243
E +D+ NM ++ELI L+ EL S+ + + K++A S E EE+E
Sbjct: 192 EEAQDICNMRVDELIGSLQTFELGLSDRNEKKSKNLAFVSNDE-----------GEEDEY 240
Query: 244 EEASEDSDEDELTLISKRLNRIWKHRQSKYK--------GSGKAKGKSESSGQKKSSLKE 295
+ +++ + + L+ K+ N++ + K K + S +K S K
Sbjct: 241 DLDTDEGLTNAVGLLGKQFNKVLNRMDRRQKPHVRNIPFDIRKGSEYHKKSDEKPSHSKG 300
Query: 296 VTCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMV-TFDESESE-DVDSD 345
+ C C+ GH K++CP K K +K L V D++ESE + DSD
Sbjct: 301 IQCHGCEGYGHIKAECPTHLK--------KQRKGLSVCRSDDTESEQESDSD 344
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 858 bits (2216), Expect = 0.0
Identities = 446/933 (47%), Positives = 606/933 (64%), Gaps = 16/933 (1%)
Query: 595 MLQISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTIC 654
++ SL A K + WYLDSGCSRHMTG ++ V FG KGKI G G +
Sbjct: 523 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLV 581
Query: 655 VDSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNI 714
D P ++ VLLV GLT NL+SISQL D+G++V F + C ++ ++ S+ K+N
Sbjct: 582 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 641
Query: 715 YKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDAL 774
Y E + CL S +E +WH+R GH +R + ++ VRG+PNLK +
Sbjct: 642 YLWTPQETSYSST-CLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 700
Query: 775 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTW 834
C CQ GK K+ + +TSR LELLH+DL GP++ ES+G KRY V+VDD+SR+TW
Sbjct: 701 CGECQIGKQVKMSNQKLQHQTTSRVLELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFTW 760
Query: 835 VKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFES-----LFDSYGIAHDFSC 889
V F+ K ++ VF ++Q EK C I R+RSDHG EFE+ S GI H+FS
Sbjct: 761 VNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSA 820
Query: 890 PRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPY 949
TPQQNG+VERKNRTLQE AR ML + + AEA+NTACYI NR+++R T Y
Sbjct: 821 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 880
Query: 950 ELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKT 1009
E+WK KP + +FH G CY+L +++ K D KS + LGYS S+ +R +N+ +T
Sbjct: 881 EIWKGRKPTVKHFHICGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 940
Query: 1010 IEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTL 1069
+ ESI+V DD + + + E NV+D K+ E AE + +E P+ +Q
Sbjct: 941 VMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDE---PNINQPD 997
Query: 1070 KKS--RITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEALQDKD 1127
K+ RI HPKELI+G+ + V TRS E ++S VS IEPK++ EAL D+
Sbjct: 998 KRPSIRIQKMHPKELIIGDPNRGVTTRSR----EIEIISNSCFVSKIEPKNVKEALTDEF 1053
Query: 1128 WILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQ 1187
WI AM+EEL QF +N+VW LV +PE +VIGTKW+F+NK NE+G + RNKARLVAQGY+Q
Sbjct: 1054 WINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQ 1113
Query: 1188 QEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFE 1247
EG+D+ ETFAP ARLE+IRLL+ + L+QMDVKSAFLNGY++EE YV QP GF
Sbjct: 1114 IEGVDFDETFAPGARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFV 1173
Query: 1248 DEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQ 1307
D PDHV++LKK+LYGLKQAPRAWYERL+ FL + + +G +D TLF K ++++I Q
Sbjct: 1174 DPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQ 1233
Query: 1308 IYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKE 1367
IYVDDI+FG + + + F + MQ+EFEMS++GEL YFLG+QV Q + ++ QSKY K
Sbjct: 1234 IYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKN 1293
Query: 1368 LLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSVHL 1427
++KKF M ++ +TP L K++ V Q LYR MIGSLLYLTASRPDI ++V
Sbjct: 1294 IVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGG 1353
Query: 1428 CARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTS 1487
CAR+Q++P+ +HL +KRIL+Y+ GT++ G+MY S+ L GYCDA +AG +RKST
Sbjct: 1354 CARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSVDDRKSTF 1413
Query: 1488 GNCQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
G C +LG+N +SW SK+Q+ ++LSTAEAEYI+A
Sbjct: 1414 GGCFYLGTNFISWFSKKQNCVSLSTAEAEYIAA 1446
Score = 119 bits (297), Expect = 1e-24
Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 35/335 (10%)
Query: 27 MESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTADQKKLYSQHHKARAIL 80
M +F D+ W ++ G+E P +D +GK P + T ++ +L + KA L
Sbjct: 1 MVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKEEDELALGNSKALNAL 60
Query: 81 LSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIMEPNESIEE 140
+ + ++ I AK +E LK +HEG KVK S+ L K+E+ M+ E I E
Sbjct: 61 FNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKEEECIHE 120
Query: 141 MFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTRDVENMSLEELISI 200
+ L + T + V +++R LP+ + VT+IE +D+ NM ++ELI
Sbjct: 121 FHMNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGS 180
Query: 201 LKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDSDEDELTLISK 260
L+ EL S+ + + K++A S E EE+E + +++ + + L+ K
Sbjct: 181 LQTFELGLSDRTEKKSKNLAFVSNDE-----------GEEDEYDLDTDEGLTNAVVLLGK 229
Query: 261 RLNRIWKHRQSKYK--------GSGKAKGKSESSGQKKSSLKEVTCFECKESGHYKSDCP 312
+ N++ + K K + S +K S K + C C+ GH K++CP
Sbjct: 230 QFNKVLNRMDRRQKPHVRNIPFDIRKGSEYQKRSDEKPSHSKGIQCHGCEGYGHIKAECP 289
Query: 313 KLKKDKKPKKHFKTKKSLMV-TFDESESE-DVDSD 345
K K +K L V D++ESE + DSD
Sbjct: 290 THLK--------KQRKGLSVCRSDDTESEQESDSD 316
>gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902324|ref|NP_912508.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2011
Score = 838 bits (2166), Expect = 0.0
Identities = 457/959 (47%), Positives = 606/959 (62%), Gaps = 54/959 (5%)
Query: 609 WYLDSGCSRHMTGESRMFQELKLKPGG----EVGFGGNEKGKIVGTGTICVDSSPCIDNV 664
W LDSGC++HMTG+ MF ++ GG +V FG N KGK++G G I + + IDNV
Sbjct: 558 WVLDSGCTQHMTGDRAMFTTFEV--GGNEQEKVTFGDNSKGKVIGLGKIAISNDLSIDNV 615
Query: 665 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 724
LV L NLLS++Q+ D F + S +D S +F R N+Y + EA
Sbjct: 616 SLVKSLNFNLLSVAQICDLVLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYLGDFNSSEA 675
Query: 725 QNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGKFT 784
CL++ W+WHRRL H M ++S+LSK +LV GL ++KF D LC ACQ GK
Sbjct: 676 NLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGKQV 735
Query: 785 KVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDES 844
K+++STSRPLELLH++ FGP +SIGG + +VIVDDYSR+TW+ FL K
Sbjct: 736 ACSHPTKSIMSTSRPLELLHMEFFGPTTYKSIGGNSHCLVIVDDYSRYTWMFFLHDKSIV 795
Query: 845 HVVFSTFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYGIAHDFSCPRTPQQNGVV 899
+F F + QNE C +V++RSD+G +F E D GI H+ S +PQQNGVV
Sbjct: 796 AELFKKFAKRGQNEFNCTLVKIRSDNGSKFKNTNIEDYCDDLGIKHELSATYSPQQNGVV 855
Query: 900 ERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNI 959
E KNRTL EMARTML E G++ F AEA+NTAC+ NR+ + +L KT YEL KPN+
Sbjct: 856 EMKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRLLKKTSYELIVGRKPNV 915
Query: 960 SYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFD 1019
+YF FGC CY+ RL KF+++ + LLGY+ SK +R YN + +EE+ V+FD
Sbjct: 916 AYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGIVEETADVQFD 975
Query: 1020 DKLDSDQS-KLVEKFADLSI-----NVSDKGKAPEEAEPE-----EDEPEEEAGPSDSQT 1068
+ S + + ++ D + N+S P E E + +DEP A PS +Q
Sbjct: 976 ETNGSQEGHENLDDVGDEGLMRAMKNMSIGDVKPIEVEDKPSTSTQDEPSTSATPSQAQV 1035
Query: 1069 LKKSR--------------ITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLI 1114
+ ++ HP + +LG+ + V+TRS ++ VS +
Sbjct: 1036 EVEEEKAQDLPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVA----SICEHYSFVSCL 1091
Query: 1115 EPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVV 1174
EPK +DEAL D DWI AM +ELN F++N VW+LV++ +VIGTKWVFRNK +E G VV
Sbjct: 1092 EPKHVDEALCDPDWINAMHKELNNFARNKVWTLVERLRDHNVIGTKWVFRNKQDENGLVV 1151
Query: 1175 RNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYI 1234
RNKAR VAQG++Q EG+D+ ETFAPV RLEAI +L++F+ NI L QMDVKSAFLNG I
Sbjct: 1152 RNKARFVAQGFTQVEGLDFGETFAPVTRLEAICILLAFASCFNIKLFQMDVKSAFLNGEI 1211
Query: 1235 SEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTL 1294
+E V+V QP GFED K P+HV+KL K+LYGLKQAPRAWYERL FLL +F GKVDTTL
Sbjct: 1212 AELVFVEQPPGFEDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTL 1271
Query: 1295 FCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTP 1354
F K DD + QIYVDDIIFG N+ CKEF +MM EFEMSM+GEL +F G+Q+ Q
Sbjct: 1272 FTKIIGDDFFVCQIYVDDIIFGCTNEVFCKEFGDMMSREFEMSMIGELSFFHGLQIKQLK 1331
Query: 1355 EGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYL 1414
+GT F + ++ KTPM L+ ++ V KLYR MIGSLLYL
Sbjct: 1332 DGT--------------FGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYL 1377
Query: 1415 TASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDA 1474
TASRPDI+FSV +CARFQ+ P+E HL A+KRILRYLK ++ +GL Y K +++KL GY D+
Sbjct: 1378 TASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDS 1437
Query: 1475 HYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSVRPGFSEQV 1533
YAG + +RKSTSG+CQ LG +LVSW+SK+Q+ +AL AEAEY+SA C + + +Q+
Sbjct: 1438 DYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNFVALFIAEAEYVSAGSCCAQLLWMKQI 1496
Score = 123 bits (308), Expect = 6e-26
Identities = 85/329 (25%), Positives = 164/329 (49%), Gaps = 20/329 (6%)
Query: 11 KPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKKLY 70
K PMF+G + WK +M + +W I+ G+ P +E+ KL
Sbjct: 10 KAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFAIT------GTPLTEIDHRNLKLN 63
Query: 71 SQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESF 130
+Q A +L +++S EE+ ++++ E A I+ L HE + K++K L +YE+F
Sbjct: 64 AQ---AMNVLFNSLSQEEFDRVSNLETAYEIWNKLAEIHESTSEYKDAKLHFLKIQYETF 120
Query: 131 IMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTRDVE 190
M P+ES+ +M+ R ++V ++ L +YT + +++R LPE + LVT + + D+
Sbjct: 121 SMLPHESVNDMYGRLNVIVNDLKGLGANYTNLEVAQKMLRALPEKYETLVTML-INSDMS 179
Query: 191 NMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDS 250
M+ L+ ++ ++M L+KK + S S+K A +++ + + E ++D
Sbjct: 180 RMTPASLLG-----KINTNDMYKLKKKEMEEASPSKKCIALQAEVEDKSKSKVNEVNKDL 234
Query: 251 DEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCFECKESGHYKSD 310
E+E+ L+++R N + R+ + +GS + ++ + S+L+ CFEC +S S
Sbjct: 235 -EEEIVLLARRFNDLLGRRKERGRGSNSNRRRNRRPNKTLSNLR---CFEC-DSNEESSA 289
Query: 311 CPKLKKDKKPKKHFKTKKSLMVTFDESES 339
+++ K KK +V E+ S
Sbjct: 290 SSGSEEEGGDDASSKKKKMAVVAIKEAPS 318
>gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1577
Score = 837 bits (2163), Expect = 0.0
Identities = 451/947 (47%), Positives = 600/947 (62%), Gaps = 52/947 (5%)
Query: 609 WYLDSGCSRHMTGESRMFQ--ELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 666
W LDSGC++HMTG+ MF E+ +V FG N KGK++G G I + + IDNV L
Sbjct: 549 WVLDSGCTQHMTGDRAMFTTFEVGRNEQEKVTFGDNSKGKVIGLGKIAISNDLSIDNVSL 608
Query: 667 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 726
V L NLLS++Q+ D F + S +D S +F R N+Y + + EA
Sbjct: 609 VKSLNFNLLSVAQICDLSLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYLVDFNSSEANL 668
Query: 727 VKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGKFTKV 786
CL++ W+WHRRL H M ++S+ SK +LV GL ++KF D LC ACQ GK
Sbjct: 669 KTCLVAKTSLGWLWHRRLAHVGMNQLSKFSKRDLVMGLKDVKFEKDKLCSACQAGKQVAC 728
Query: 787 PFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHV 846
K+++STS+PLELLH+DLF P +SIGG + +VIVDDYSR+TWV FL K
Sbjct: 729 SHPTKSIMSTSKPLELLHMDLFDPTTYKSIGGNSHCLVIVDDYSRYTWVFFLHDKSIVAD 788
Query: 847 VFSTFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYGIAHDFSCPRTPQQNGVVER 901
+F F + QNE +C +V++RS+ G EF E D GI H+ +PQQNGVVER
Sbjct: 789 LFKKFAKRAQNEFSCTLVKIRSNIGSEFKNTNIEDYCDDLGIKHELFATYSPQQNGVVER 848
Query: 902 KNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISY 961
KNRTL EMARTML E G++ F AEA+NTAC+ NR+ + +L KT YE+ KPNI+Y
Sbjct: 849 KNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRVLKKTSYEVIVGRKPNIAY 908
Query: 962 FHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDK 1021
F FGC CY+ RL KF+++ + LLGY+ +SK +R YN + +EE+ V+FD+
Sbjct: 909 FRVFGCKCYIHRKGVRLTKFESRCDEGFLLGYASKSKAYRVYNKNKGIVEETADVQFDET 968
Query: 1022 LDSDQS-KLVEKFADLSI-----NVSDKGKAPEEAEPE-----EDEPEEEAGPSDSQTLK 1070
S + + ++ D + N+S P E E + +DEP A PS +Q
Sbjct: 969 NGSQEGHENLDDVGDEGLMRVMKNMSIGDVKPIEVEDKPSTSTQDEPSTSAMPSQAQVEV 1028
Query: 1071 KSR--------------ITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEP 1116
+ ++ HP + +LG+ + V+TRS ++ VS +E
Sbjct: 1029 EEEKAQEPPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVT----SICEHYSFVSCLER 1084
Query: 1117 KSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRN 1176
K +DEAL D DW+ AM EEL F++N VW+LV++P +VIGTKWVFRNK +E G VVRN
Sbjct: 1085 KHVDEALCDPDWMNAMHEELKNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGLVVRN 1144
Query: 1177 KARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISE 1236
KARLVAQG++Q EG+D+ ETFAPVARLEAI +L++F+ +I L QMDVKSAFLN
Sbjct: 1145 KARLVAQGFTQVEGLDFGETFAPVARLEAICILLAFASCFDIKLFQMDVKSAFLN----- 1199
Query: 1237 EVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFC 1296
D K P+HV+KL K+LYGL+QAPRAWYERL FLL +F GKVD TLF
Sbjct: 1200 -----------DTKYPNHVYKLSKALYGLRQAPRAWYERLRDFLLSKDFKIGKVDITLFT 1248
Query: 1297 KTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEG 1356
K DD + QIYVDDIIFGS N+ CKEF +MM EFEMSM+GEL +FLG+Q+ Q G
Sbjct: 1249 KIIGDDFFVYQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKNG 1308
Query: 1357 TYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTA 1416
T++ Q+KY K+LLK+F + ++ KTPM L+ ++ V KLYR MIGSLLYLT
Sbjct: 1309 TFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTV 1368
Query: 1417 SRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHY 1476
SRPDI+FSV +CARFQ+ P+E HL A+KRILRYLK ++ +GL Y K +++KL GY D Y
Sbjct: 1369 SRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDPDY 1428
Query: 1477 AGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAIC 1523
AG + +RKSTS +CQ LG +LVSW+SK+Q+++ALSTAE EY+SA C
Sbjct: 1429 AGCKVDRKSTSSSCQMLGRSLVSWSSKKQNSVALSTAETEYVSAGSC 1475
Score = 90.5 bits (223), Expect = 4e-16
Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 10/201 (4%)
Query: 8 YNAKPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 67
+ K PMF+G + WK +M + +W I+ G+ G + M D +
Sbjct: 7 HEGKAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFA----ITGTPL----MEIDHR 58
Query: 68 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKY 127
L + +A L +++S EE+ ++++ E A I+ L HEG + K++K L +Y
Sbjct: 59 NL-QLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQY 117
Query: 128 ESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTR 187
E+F M P+ES+ +M+ R ++V ++ L +YT + +++R LPE + LVT + +
Sbjct: 118 ETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLVTML-INS 176
Query: 188 DVENMSLEELISILKCHELKR 208
D+ M+ L+ + +++++
Sbjct: 177 DMSRMTPASLLGKINTNDMRK 197
>gb|AAL35396.1| Opie2a pol [Zea mays]
Length = 1048
Score = 830 bits (2143), Expect = 0.0
Identities = 452/951 (47%), Positives = 590/951 (61%), Gaps = 51/951 (5%)
Query: 619 MTGESRMFQE-LKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDNVLLVDGLTHNLLS 676
MTGE +MF +K K + + FG +GK+ G G I + S I NV LV+ L +N LS
Sbjct: 1 MTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAISSEHSISNVFLVESLGYNFLS 60
Query: 677 ISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEE 736
+SQL + GY+ +F + DGS+ F +Y + ++ EA CL++
Sbjct: 61 VSQLCNMGYNCLFTNVDVSVFRRSDGSLAFKGVLDGKLYLVDFAKEEAGLDACLIAKTSM 120
Query: 737 QWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVST 796
W+WHRRL H M+ + +L K V GL N++F D C ACQ GK + KNV++T
Sbjct: 121 GWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFKKDRPCVACQAGKQVRGSHHTKNVMTT 180
Query: 797 SRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHVVFSTFIAQVQ 856
SRPLE+LH+DLFGPV SIGG +YG+VIVDD+SR+TWV FL K E+ ++ + Q
Sbjct: 181 SRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQGTLKRYLRRAQ 240
Query: 857 NEKACRIVRVRSDHGGEFESL-----FDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMAR 911
NE ++ ++RSD+G EF++L GI H+FS P TPQQNGVVERKNRTL +MAR
Sbjct: 241 NEFELKVKKIRSDNGSEFKNLQVEEFLVEEGIKHEFSAPYTPQQNGVVERKNRTLMDMAR 300
Query: 912 TMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYV 971
TML E + F +EAVNTAC+ NR+ + +L T YEL KPN+SYF FG CY+
Sbjct: 301 TMLGEFKTPERFWSEAVNTACHSINRVYLHRLLKNTSYELLTGNKPNVSYFRVFGSKCYI 360
Query: 972 LNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLV- 1030
L K R KF K+ + LLGY +K +R +N + +E S V FD+ S + ++V
Sbjct: 361 LVKKGRTSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDETNGSLREQVVN 420
Query: 1031 ------EKFADLSINVSDKGKAPEEAEPEEDEP--------------------------- 1057
E ++ G + E+D+P
Sbjct: 421 LDDVDEEDVPTAAMRTMAIGDVRPQEHLEQDQPSSTTMVHPPTQDDEQAPQVGAHDQGGA 480
Query: 1058 -----EEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVS 1112
EEE P T ++ I HP ILG+ + V TRS + E VS
Sbjct: 481 QDVQVEEEEAPQAPPTQVRATIQRNHPVNQILGDISKGVTTRSRLVNFCEHY----SFVS 536
Query: 1113 LIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGD 1172
IEP ++E L D DW+LAM+EELN F +N+VW+LV +P+ +V+GTKWVFRNK +E G
Sbjct: 537 SIEPFRVEEVLLDPDWVLAMQEELNNFKRNEVWTLVPRPKQ-NVVGTKWVFRNKQDEHGV 595
Query: 1173 VVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNG 1232
V RNKARLVA+GY+Q G+D+ ETFAPVARL++IR+ ++++ +H+ L+QMDVKSAFLNG
Sbjct: 596 VTRNKARLVAKGYAQVAGLDFEETFAPVARLKSIRIWLAYAAHHSFRLYQMDVKSAFLNG 655
Query: 1233 YISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDT 1292
I EEVYV QP GFEDE+ PDHV KL K+LYGLKQAPRAWYE L FL+ N F GK D
Sbjct: 656 PIKEEVYVEQPPGFEDERFPDHVCKLSKALYGLKQAPRAWYECLRDFLIANAFKVGKADP 715
Query: 1293 TLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQ 1352
TLF KT D+ + QIYVDDIIFGS NQ+ C+EFS +M +FEMSMMGEL YFLG QV Q
Sbjct: 716 TLFTKTCDGDLFVCQIYVDDIIFGSTNQNSCEEFSRVMTQKFEMSMMGELSYFLGFQVRQ 775
Query: 1353 TPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLL 1412
+GT+I Q+KYT++L+K+F M ++ AKTPM + V QK YR IGSLL
Sbjct: 776 LKDGTFISQTKYTQDLIKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSTIGSLL 835
Query: 1413 YLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYC 1472
YL ASRPDI+ SV +CARFQSDPRE HL A+KRILRYL T G+ Y K S + L GY
Sbjct: 836 YLCASRPDIMLSVCMCARFQSDPRECHLVAVKRILRYLVATPCFGIWYPKGSTFDLIGYS 895
Query: 1473 DAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAIC 1523
D+ YA + +RKSTS CQFLG +LVSW SK+Q+++ALSTAEAEY++ C
Sbjct: 896 DSDYARCKVDRKSTSRMCQFLGRSLVSWNSKKQTSVALSTAEAEYVAVGQC 946
>emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa (japonica cultivar-group)]
gi|50923031|ref|XP_471876.1| OSJNBa0063G07.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1539
Score = 818 bits (2112), Expect = 0.0
Identities = 447/949 (47%), Positives = 596/949 (62%), Gaps = 69/949 (7%)
Query: 609 WYLDSGCSRHMTGESRMFQELKLKPGG----EVGFGGNEKGKIVGTGTICVDSSPCIDNV 664
W LDSGC++HMTG+ MF ++ GG +V F N K K++G G I + + IDNV
Sbjct: 524 WVLDSGCTQHMTGDRAMFTTFEV--GGNEQEKVTFVDNSKRKVIGLGKIAISNDLSIDNV 581
Query: 665 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 724
V L NLLS++Q+ D G F + S +D S +F R N+Y + + EA
Sbjct: 582 SFVKSLNFNLLSVAQICDLGLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYFVDFNSSEA 641
Query: 725 QNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGKFT 784
CL++ W+WHRRL H M ++S+LSK +LV GL ++KF D LC ACQ GK
Sbjct: 642 NLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGKQV 701
Query: 785 KVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDES 844
K+++STSRPLELLH+DLFGP +SIGG + +VIVDDYSR+TWV FL K
Sbjct: 702 ACSHPTKSIMSTSRPLELLHMDLFGPTTYKSIGGNSHCLVIVDDYSRYTWVFFLHDKSIV 761
Query: 845 HVVFSTFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYGIAHDFSCPRTPQQNGVV 899
+F + QNE +C +V++RSD+G EF E D GI H+ S +PQQNGVV
Sbjct: 762 AELFKKIAKRAQNEFSCTLVKIRSDNGSEFKNTNIEDYCDDLGIKHELSATYSPQQNGVV 821
Query: 900 ERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNI 959
ERKNRTL EMARTML E G++ F AEA+NTAC+ NR + +L T YEL KPN+
Sbjct: 822 ERKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRFYLHRLLKNTSYELIVGRKPNV 881
Query: 960 SYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFD 1019
+YF FGC CY+ RL KF+++ + LLGY+ SK +R YN + T+EE+ V+FD
Sbjct: 882 AYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGTVEETADVQFD 941
Query: 1020 DKLDSDQS-KLVEKFADLSI-----NVSDKGKAPEEAEPE-----EDEPEEEAGPSDSQT 1068
+ S + + ++ D + N+S P E E + +DEP A PS +Q
Sbjct: 942 ETNGSQEGHENLDDVGDEGLIRAMKNMSFGDVKPIEVEDKPSTSTQDEPSTFATPSQAQV 1001
Query: 1069 LKK--------------SRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLI 1114
+ + ++ HP + +LG+ + V+T S ++ VS +
Sbjct: 1002 EVEEEKAQDPPIPPRIHTTLSKDHPIDQVLGDISKGVQTLSRV----ASICEHYSFVSCL 1057
Query: 1115 EPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVV 1174
EPK +DEAL D DW+ AM EELN F++N VW+LV++P +VIGTKWVFRNK +E G VV
Sbjct: 1058 EPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGLVV 1117
Query: 1175 RNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYI 1234
RNKARLVAQG++Q EG+D+ ETFAPVARLEAI +L++F+ +I L QMDVKSAFLNG I
Sbjct: 1118 RNKARLVAQGFTQVEGLDFGETFAPVARLEAICILLAFASWFDIKLFQMDVKSAFLNGEI 1177
Query: 1235 SEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTL 1294
+E V+V QP GFED K P+H FK+ GKVDTTL
Sbjct: 1178 AELVFVEQPPGFEDPKYPNHDFKI-----------------------------GKVDTTL 1208
Query: 1295 FCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTP 1354
F K DD + QIYVDDIIFGS N+ CKEF +MM EFEMSM+GEL +FLG+Q+ Q
Sbjct: 1209 FTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLK 1268
Query: 1355 EGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYL 1414
+GT++ Q+KY K+LLK+F + ++ KTPM L+ ++ V KLYR MIGSLLYL
Sbjct: 1269 DGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYL 1328
Query: 1415 TASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDA 1474
TASRPDI+FSV +CA FQ+ P+E HL A+KRILRYLK ++ +GL Y K +++KL GY D+
Sbjct: 1329 TASRPDIMFSVCMCAWFQAAPKECHLVAVKRILRYLKYSSTIGLWYPKGAKFKLVGYSDS 1388
Query: 1475 HYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAIC 1523
YAG + +R STSG+CQ LG +LVSW+SK+Q+++ALSTAEAEY+SA C
Sbjct: 1389 DYAGCKVDRNSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSC 1437
Score = 143 bits (361), Expect = 4e-32
Identities = 97/367 (26%), Positives = 179/367 (48%), Gaps = 40/367 (10%)
Query: 11 KPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKKLY 70
K PMF+G + WK +M + +W I+ G+ I + +T +
Sbjct: 10 KAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFA---------ITGTPLTEIDHRNL 60
Query: 71 SQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESF 130
+ +A L +++S EE+ ++++ E A I+ L HEG + K++K L +YE+F
Sbjct: 61 QLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAKIHEGTSEYKDAKLHFLKIQYETF 120
Query: 131 IMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTRDVE 190
M P+ES+ +M+ R ++V ++ L +YT + +++R LPE + LVT + + D+
Sbjct: 121 SMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAKKMLRALPEKYETLVTML-INSDMS 179
Query: 191 NMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDS 250
M+ L+ ++ ++M L+KK + E + ++K ALQAE E+ + ++ +
Sbjct: 180 RMTPASLLG-----KINTNDMYKLKKKEM-----EEASPSKKCIALQAEVEDKGKVNDVN 229
Query: 251 D--EDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCFECKESGHYK 308
E+E+ L+++R N R+ + KGS + +++ + S+L+ CFEC E GH+
Sbjct: 230 KNLEEEIALLARRFNDFLGRRKERGKGSNSNRRRNKRPNKTLSNLR---CFECGEKGHFA 286
Query: 309 SDCPKLKKD---------------KKPKKHFKTKKSLMVTFDESESEDVDSDGESKDSWL 353
S CP D KK KK K ++ + +D +E S + +D
Sbjct: 287 SKCPSKDDDGDKSSKKKSGGYKLMKKLKKEGKKIEAFIGEWDSNEESSASSGSKEEDGDD 346
Query: 354 LSKTKKQ 360
S KK+
Sbjct: 347 ASSKKKK 353
>ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)]
gi|28269414|gb|AAO37957.1| putative gag-pol polyprotein
[Oryza sativa (japonica cultivar-group)]
Length = 1969
Score = 813 bits (2101), Expect = 0.0
Identities = 444/951 (46%), Positives = 592/951 (61%), Gaps = 43/951 (4%)
Query: 605 KHQSWYLDSGCSRHMTGESRMFQELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 663
+ SW +DSGCSRHMTGE++ F L G E + FG G+++ GTI V+ + +
Sbjct: 750 RSNSWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKD 809
Query: 664 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 723
V LV L +NLLS+SQL D+ +V F + R + + V F+ R ++
Sbjct: 810 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 868
Query: 724 AQNVKCLL-SVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 782
+CL+ S N + + WHRRLGH +S++S ++L+RGLP LK D +C C+ GK
Sbjct: 869 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVQKDLVCAPCRHGK 928
Query: 783 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 842
T K +V T P +LLH+D GP + +S+GGK Y +V+VDD+SR++WV FL K+
Sbjct: 929 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 988
Query: 843 ESHVVFSTFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYGIAHDFSCPRTPQQNG 897
E+ F + + E + +RSD+G EF ES DS G+ H FS P PQQNG
Sbjct: 989 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1048
Query: 898 VVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 957
VVERKNRTL EMARTML E + F EA++ AC+I NR+ +R IL+KTPYEL +P
Sbjct: 1049 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1108
Query: 958 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVR 1017
+S+ FGC C+VL + + L KF+++S + LGY+ S+ +R Y I E+ V
Sbjct: 1109 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1167
Query: 1018 FDDKL---------------------DSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDE 1056
FD+ D D + D + V + G +P P D
Sbjct: 1168 FDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 1226
Query: 1057 PE------EEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGL 1110
P EE S I HP + ++G E V TR+ R YE L
Sbjct: 1227 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERV-TRN--RSYE---LVNSAF 1280
Query: 1111 VSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEK 1170
V+ EPK++ AL D++W+ AM EEL F +N VWSLV+ P +VIGTKWVF+NKL E
Sbjct: 1281 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 1340
Query: 1171 GDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFL 1230
G +VRNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+L++F+ + L QMDVKSAFL
Sbjct: 1341 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1400
Query: 1231 NGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKV 1290
NG I EEVYV QP GFE+ K P+HVFKL+K+LYGLKQAPRAWYERL +FLL+N F G V
Sbjct: 1401 NGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1460
Query: 1291 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQV 1350
D TLF D L+VQIYVDDIIFG ++ +L +FS++M EFEMSMMGEL +FLG+Q+
Sbjct: 1461 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1520
Query: 1351 DQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGS 1410
QT EG ++HQ+KY+KELLKKF+M + TPM T L ++ +V Q+ YR MIGS
Sbjct: 1521 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1580
Query: 1411 LLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSG 1470
LLYLTASRPDI FSV LCARFQ+ PR +H A+KRI RY+K T G+ Y +S +
Sbjct: 1581 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRA 1640
Query: 1471 YCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1521
+ DA +AG + +RKSTSG C FLG++LVSW+S++QS++A STAEAEY++AA
Sbjct: 1641 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAA 1691
Score = 143 bits (361), Expect = 4e-32
Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 46/365 (12%)
Query: 8 YNAKPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 67
Y+AKP +FDG F WK RME++ ++W+ + Y P DAD +T
Sbjct: 5 YSAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITPANM 56
Query: 68 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKY 127
+++AR ++ IS E+ ++ + A ++ +L HEGN ++ + ++Y
Sbjct: 57 AQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHKEY 116
Query: 128 ESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPES-WMPLVTSIELT 186
+ F M P ESI+ F RF +++ +R + K ++ D+ ++ CL W VTSI +
Sbjct: 117 QRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITES 176
Query: 187 RDVENMSLEELISILKCHELKRSEMQDLRKKSIAL-------KSKSEKAKAEKSKALQAE 239
+ ++++++L S LK HE+ + L K S+AL S ++ A +L A
Sbjct: 177 APLSDLTMDKLYSKLKTHEMDVFHRKGL-KHSMALVADPSGSTSSNDSAFVYGGFSLAAL 235
Query: 240 EEESEEASEDSDEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCF 299
+EE E ED+L L +++ +R +K+ + + +G + + CF
Sbjct: 236 HSVTEEQLEKIPEDDLALFARKFSRAYKNVRDRKRG---------------KTNEPFVCF 280
Query: 300 ECKESGHYKSDCPKLKK--DKKPKK----HFKTKKSLM--------VTFDESESEDVDSD 345
EC E H + +CPKLKK DK KK K KK LM +E + D+DSD
Sbjct: 281 ECGEPNHKRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSD 340
Query: 346 GESKD 350
+ ++
Sbjct: 341 DDDQE 345
>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902378|ref|NP_912535.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2145
Score = 810 bits (2092), Expect = 0.0
Identities = 442/951 (46%), Positives = 591/951 (61%), Gaps = 43/951 (4%)
Query: 605 KHQSWYLDSGCSRHMTGESRMFQELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 663
+ SW +DSGCSRHMTGE++ F L E + FG G+++ GTI V+ + +
Sbjct: 750 RSNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKD 809
Query: 664 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 723
V LV L +NLLS+SQL D+ +V F + R + + V F+ R ++
Sbjct: 810 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 868
Query: 724 AQNVKCLL-SVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 782
+CL+ S N + + WHRRLGH +S++S ++L+RGLP LK D +C C+ GK
Sbjct: 869 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGK 928
Query: 783 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 842
T K +V T P +LLH+D GP + +S+GGK Y +V+VDD+SR++WV FL K+
Sbjct: 929 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 988
Query: 843 ESHVVFSTFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYGIAHDFSCPRTPQQNG 897
E+ F + + E + +RSD+G EF ES DS G+ H FS P PQQNG
Sbjct: 989 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1048
Query: 898 VVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 957
VVERKNRTL EMARTML E + F EA++ AC+I NR+ +R IL+KTPYEL +P
Sbjct: 1049 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1108
Query: 958 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVR 1017
+S+ FGC C+VL + + L KF+++S + LGY+ S+ +R Y I E+ V
Sbjct: 1109 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1167
Query: 1018 FDDKL---------------------DSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDE 1056
FD+ D D + D + V + G +P P D
Sbjct: 1168 FDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 1226
Query: 1057 PE------EEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGL 1110
P EE S I HP + ++G E V TR+ R YE L
Sbjct: 1227 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERV-TRN--RSYE---LVNSAF 1280
Query: 1111 VSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEK 1170
V+ EPK++ AL D++W+ AM EEL F +N VWSLV+ P +VIGTKWVF+NKL E
Sbjct: 1281 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 1340
Query: 1171 GDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFL 1230
G +VRNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+L++F+ + L QMDVKSAFL
Sbjct: 1341 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1400
Query: 1231 NGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKV 1290
NG I EEVYV QP GFE+ K P+HVFKL+K+LYGLKQAPRAWYERL +FLL+N F G V
Sbjct: 1401 NGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1460
Query: 1291 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQV 1350
D TLF D L+VQIYVDDIIFG ++ +L +FS++M EFEMSMMGEL +FLG+Q+
Sbjct: 1461 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1520
Query: 1351 DQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGS 1410
QT EG ++HQ+KY+KELLKKF+M + TPM T L ++ +V Q+ YR MIGS
Sbjct: 1521 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1580
Query: 1411 LLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSG 1470
LLYLTASRPDI FSV LCARFQ+ PR +H A+KR+ RY+K T G+ Y +S +
Sbjct: 1581 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRA 1640
Query: 1471 YCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1521
+ DA +AG + +RKSTSG C FLG++LVSW+S++QS++A STAEAEY++AA
Sbjct: 1641 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAA 1691
Score = 143 bits (361), Expect = 4e-32
Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 46/365 (12%)
Query: 8 YNAKPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 67
Y+AKP +FDG F WK RME++ ++W+ + Y P DAD +T
Sbjct: 5 YSAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITPANM 56
Query: 68 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKY 127
+++AR ++ IS E+ ++ + A ++ +L HEGN ++ + ++Y
Sbjct: 57 AQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHKEY 116
Query: 128 ESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPES-WMPLVTSIELT 186
+ F M P ESI+ F RF +++ +R + K ++ D+ ++ CL W VTSI +
Sbjct: 117 QRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITES 176
Query: 187 RDVENMSLEELISILKCHELKRSEMQDLRKKSIAL-------KSKSEKAKAEKSKALQAE 239
+ ++++++L S LK HE+ + L K S+AL S ++ A +L A
Sbjct: 177 APLSDLTMDKLYSKLKTHEMDVFHRKGL-KHSMALVADPSGSTSSNDSAFVYGGFSLAAL 235
Query: 240 EEESEEASEDSDEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCF 299
+EE E ED+L L +++ +R +K+ + + +G + + CF
Sbjct: 236 HSVTEEQLEKIPEDDLALFARKFSRAYKNVRDRKRG---------------KTNEPFVCF 280
Query: 300 ECKESGHYKSDCPKLKK--DKKPKK----HFKTKKSLM--------VTFDESESEDVDSD 345
EC E H + +CPKLKK DK KK K KK LM +E + D+DSD
Sbjct: 281 ECGEPNHKRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSD 340
Query: 346 GESKD 350
+ ++
Sbjct: 341 DDDQE 345
>ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultivar-group)]
gi|32488723|emb|CAE03600.1| OSJNBb0004A17.2 [Oryza sativa
(japonica cultivar-group)]
Length = 1877
Score = 810 bits (2092), Expect = 0.0
Identities = 442/951 (46%), Positives = 591/951 (61%), Gaps = 43/951 (4%)
Query: 605 KHQSWYLDSGCSRHMTGESRMFQELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 663
+ SW +DSGCSRHMTGE++ F L E + FG G+++ GTI V+ + +
Sbjct: 832 RSNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKD 891
Query: 664 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 723
V LV L +NLLS+SQL D+ +V F + R + + V F+ R ++
Sbjct: 892 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 950
Query: 724 AQNVKCLL-SVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 782
+CL+ S N + + WHRRLGH +S++S ++L+RGLP LK D +C C+ GK
Sbjct: 951 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGK 1010
Query: 783 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 842
T K +V T P +LLH+D GP + +S+GGK Y +V+VDD+SR++WV FL K+
Sbjct: 1011 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 1070
Query: 843 ESHVVFSTFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYGIAHDFSCPRTPQQNG 897
E+ F + + E + +RSD+G EF ES DS G+ H FS P PQQNG
Sbjct: 1071 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1130
Query: 898 VVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 957
VVERKNRTL EMARTML E + F EA++ AC+I NR+ +R IL+KTPYEL +P
Sbjct: 1131 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1190
Query: 958 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVR 1017
+S+ FGC C+VL + + L KF+++S + LGY+ S+ +R Y I E+ V
Sbjct: 1191 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1249
Query: 1018 FDDKL---------------------DSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDE 1056
FD+ D D + D + V + G +P P D
Sbjct: 1250 FDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 1308
Query: 1057 PE------EEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGL 1110
P EE S I HP + ++G E V TR+ R YE L
Sbjct: 1309 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERV-TRN--RSYE---LVNSAF 1362
Query: 1111 VSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEK 1170
V+ EPK++ AL D++W+ AM EEL F +N VWSLV+ P +VIGTKWVF+NKL E
Sbjct: 1363 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 1422
Query: 1171 GDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFL 1230
G +VRNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+L++F+ + L QMDVKSAFL
Sbjct: 1423 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1482
Query: 1231 NGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKV 1290
NG I EEVYV QP GFE+ K P+HVFKL+K+LYGLKQAPRAWYERL +FLL+N F G V
Sbjct: 1483 NGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1542
Query: 1291 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQV 1350
D TLF D L+VQIYVDDIIFG ++ +L +FS++M EFEMSMMGEL +FLG+Q+
Sbjct: 1543 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1602
Query: 1351 DQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGS 1410
QT EG ++HQ+KY+KELLKKF+M + TPM T L ++ +V Q+ YR MIGS
Sbjct: 1603 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1662
Query: 1411 LLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSG 1470
LLYLTASRPDI FSV LCARFQ+ PR +H A+KR+ RY+K T G+ Y +S +
Sbjct: 1663 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRA 1722
Query: 1471 YCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1521
+ DA +AG + +RKSTSG C FLG++LVSW+S++QS++A STAEAEY++AA
Sbjct: 1723 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAA 1773
Score = 143 bits (361), Expect = 4e-32
Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 46/365 (12%)
Query: 8 YNAKPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 67
Y+AKP +FDG F WK RME++ ++W+ + Y P DAD +T
Sbjct: 5 YSAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITPANM 56
Query: 68 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKY 127
+++AR ++ IS E+ ++ + A ++ +L HEGN ++ + ++Y
Sbjct: 57 AQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHKEY 116
Query: 128 ESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPES-WMPLVTSIELT 186
+ F M P ESI+ F RF +++ +R + K ++ D+ ++ CL W VTSI +
Sbjct: 117 QRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITES 176
Query: 187 RDVENMSLEELISILKCHELKRSEMQDLRKKSIAL-------KSKSEKAKAEKSKALQAE 239
+ ++++++L S LK HE+ + L K S+AL S ++ A +L A
Sbjct: 177 APLSDLTMDKLYSKLKTHEMDVFHRKGL-KHSMALVADPSGSTSSNDSAFVYGGFSLAAL 235
Query: 240 EEESEEASEDSDEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCF 299
+EE E ED+L L +++ +R +K+ + + +G + + CF
Sbjct: 236 HSVTEEQLEKIPEDDLALFARKFSRAYKNVRDRKRG---------------KTNEPFVCF 280
Query: 300 ECKESGHYKSDCPKLKK--DKKPKK----HFKTKKSLM--------VTFDESESEDVDSD 345
EC E H + +CPKLKK DK KK K KK LM +E + D+DSD
Sbjct: 281 ECGEPNHKRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSD 340
Query: 346 GESKD 350
+ ++
Sbjct: 341 DDDQE 345
>ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1410
Score = 809 bits (2089), Expect = 0.0
Identities = 442/951 (46%), Positives = 591/951 (61%), Gaps = 43/951 (4%)
Query: 605 KHQSWYLDSGCSRHMTGESRMFQELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 663
+ SW +DSGCSRHMTGE++ F L G E + FG G+++ GTI V+ + +
Sbjct: 365 RSNSWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKD 424
Query: 664 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 723
V LV L +NLLS+SQL D+ +V F + R + + V F+ R ++
Sbjct: 425 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 483
Query: 724 AQNVKCLL-SVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 782
+CL+ S N + + WHRRLGH +S++S ++L+RGLP LK D +C C+ GK
Sbjct: 484 PGPSRCLVASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKAPKDLVCAPCRHGK 543
Query: 783 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 842
T K +V T P +LLH++ GP + +S+GGK Y +V+VDD+SR++WV FL K+
Sbjct: 544 MTSSSHKPVTMVMTDGPGQLLHMNTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 603
Query: 843 ESHVVFSTFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYGIAHDFSCPRTPQQNG 897
E+ F + + E + +RSD+G EF ES DS G+ H FS P PQQNG
Sbjct: 604 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 663
Query: 898 VVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 957
VVERKNRTL EMARTML E + F EA++ AC+I NR+ +R IL+KTPYEL +P
Sbjct: 664 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 723
Query: 958 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVR 1017
+S+ FGC C+VL + + L KF+++S + LGY+ S+ +R Y I E+ V
Sbjct: 724 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 782
Query: 1018 FDDKL---------------------DSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDE 1056
FD+ D D + D + V + G +P P D
Sbjct: 783 FDEASPGARPEISGVLDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 841
Query: 1057 PE------EEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGL 1110
P EE S I HP + ++G E V TR+ R Y+ L
Sbjct: 842 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERV-TRN--RSYD---LVNSAF 895
Query: 1111 VSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEK 1170
V+ EPK++ AL D++W+ AM EEL F +N VWSLV+ P +VIGTKWVF+NKL E
Sbjct: 896 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 955
Query: 1171 GDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFL 1230
G +VRNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+L++F+ + L QMDVKSAFL
Sbjct: 956 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1015
Query: 1231 NGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKV 1290
NG I EEVYV QP GFE+ K P+HVFKL K+LYGLKQAPRAWYERL +FLL+N F G V
Sbjct: 1016 NGVIEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1075
Query: 1291 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQV 1350
D TLF D L+VQIYVDDIIFG ++ +L +FS++M EFEMSMMGEL +FLG+Q+
Sbjct: 1076 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1135
Query: 1351 DQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGS 1410
QT EG ++HQ+KY+KELLKKF+M + TPM T L ++ +V Q+ YR MIGS
Sbjct: 1136 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1195
Query: 1411 LLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSG 1470
LLYLTASRPDI FSV LCARFQ+ PR +H A+KRI RY+K T G+ Y +S +
Sbjct: 1196 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRA 1255
Query: 1471 YCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1521
+ DA +AG + +RKSTSG C FLG++LVSW+S++QS++A STAEAEY++AA
Sbjct: 1256 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAA 1306
Score = 120 bits (301), Expect = 4e-25
Identities = 89/346 (25%), Positives = 164/346 (46%), Gaps = 46/346 (13%)
Query: 27 MESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKKLYSQHHKARAILLSAISY 86
ME++ ++W+ + Y P DAD +T +++AR ++ IS
Sbjct: 1 MEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITPANMAQVDFNYRARNAIIGGISS 52
Query: 87 EEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIMEPNESIEEMFSRFQ 146
E+ ++ + A ++ +L HEGN ++ + ++Y+ F M P ESI+ F RF
Sbjct: 53 GEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHKEYQRFEMHPGESIDSYFKRFG 112
Query: 147 LLVAGIRPLNKSYTTKDHVIRVIRCLPES-WMPLVTSIELTRDVENMSLEELISILKCHE 205
+V+ +R + K ++ D+ ++ CL W VTSI + + ++++++L S LK HE
Sbjct: 113 EIVSKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITESAPLSDLTMDKLYSKLKTHE 172
Query: 206 LKRSEMQDLRKKSIALKSKSEKAKAEKSKA-------LQAEEEESEEASEDSDEDELTLI 258
+ + L K S+AL + + + A L A +EE E ED+L L
Sbjct: 173 MDVFHRKGL-KHSMALVADPSGSTSSNDSAFVCGGFSLAALHSVTEEQLEKIPEDDLALF 231
Query: 259 SKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCFECKESGHYKSDCPKLKK-- 316
+++ +R +K+ ++K +G + + CFEC E H + +CPKLKK
Sbjct: 232 ARKFSRAYKNVRNKKRG---------------KTNEPFVCFECGEPNHIRVNCPKLKKKS 276
Query: 317 ---DKKPK------KHFKTKKSL---MVTFDESESEDVDSDGESKD 350
KKP+ K+ KK++ + +E + D+DSD + ++
Sbjct: 277 DKTTKKPEGQGRKGKNDLMKKAIHKVLAALEEVQLSDIDSDDDDQE 322
>gb|AAP53706.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37534234|ref|NP_921419.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1419
Score = 795 bits (2054), Expect = 0.0
Identities = 430/941 (45%), Positives = 590/941 (62%), Gaps = 41/941 (4%)
Query: 590 RTRLSMLQISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGE-VGFGGNEKGKIV 648
++++ +L+++L+A K W +DSG SRHMTG+ F LK E + F +V
Sbjct: 411 QSKVLVLEVALVAR-KENVWIVDSGDSRHMTGDKNWFSSLKKASKTESIVFADASTSAVV 469
Query: 649 GTGTICVDSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNS 708
TG + V+ + NV LV L +NLLS+SQ+ D+ ++V F + + SVL N
Sbjct: 470 ATGLVKVNEKFELKNVALVKDLKYNLLSVSQIVDENFEVHFKKTGSKVFDSCGDSVL-NI 528
Query: 709 KRKNNIYKIRLSELEAQNVKCLLS-VNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNL 767
R ++K + + CL++ +++ WHRRLGH +++LS L+LVRGL L
Sbjct: 529 SRYERVFKADFENSVSLVITCLVAKFDKDVMFWHRRLGHVGFDHLTRLSGLDLVRGLSKL 588
Query: 768 KFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVD 827
K D +C C+ K V T P +LLH+D GP + +S+GGK Y +VIVD
Sbjct: 589 KKDLDLICTPCRHAKMVSTSHAPIVSVMTDAPGQLLHMDTVGPARVQSVGGKWYVLVIVD 648
Query: 828 DYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYG 882
D+SR++WV F+T KDE+ F +++ E + R+RSD+GGEF E + G
Sbjct: 649 DFSRYSWVFFMTTKDEAFQHFRGLFLRLELEFPGSLKRIRSDNGGEFKNASFEQFCNERG 708
Query: 883 IAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRP 942
+ H+FS PR PQQN VVERKNR L EMARTML E + F AEA+NTACYI NR+ +R
Sbjct: 709 LEHEFSSPRVPQQNSVVERKNRVLVEMARTMLDEYKTTRKFWAEAINTACYISNRVFLRS 768
Query: 943 ILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRF 1002
L KT YEL +P +S+ FGC C+VL + + L KF+A+S+ L LGY ++G+R
Sbjct: 769 KLGKTSYELRFGHQPKVSHLRVFGCKCFVLKSGN-LDKFEARSTDGLFLGYPAHTRGYRV 827
Query: 1003 YNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAG 1062
I E+ V FD+ + + + + + G+ E+ +D+ +E G
Sbjct: 828 LILGTNKIVETCEVSFDEASPGTRPDIAGTLSQVQ---GEDGRIFEDESDYDDD--DEVG 882
Query: 1063 PSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEA 1122
+ +T + S++T V SAF V+ EPK + A
Sbjct: 883 SAGERTTR-SKVTT------------HDVCANSAF-------------VASFEPKDVSHA 916
Query: 1123 LQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVA 1182
L D+ WI AM EEL F +N VW+LV+ P +VIGTKWVF+NK NE G +VRNKARLVA
Sbjct: 917 LTDESWINAMHEELENFERNKVWTLVEPPSGHNVIGTKWVFKNKQNEDGLIVRNKARLVA 976
Query: 1183 QGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQ 1242
QG++Q EG+D+ ETFAPVAR+EAIRLL++F+ + L+QMDVKSAFLNG+I EEVYV Q
Sbjct: 977 QGFTQVEGLDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQ 1036
Query: 1243 PLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDD 1302
P GFE+ P+HVFKL K+LYGLKQAPRAWY+RL +FLL F GKVD TLF + D+
Sbjct: 1037 PPGFENPDFPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDN 1096
Query: 1303 ILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQS 1362
L VQIYVDDIIFG + ++ +F+E M+ EFEMSMMGEL YFLG+Q+ QTP+GT++HQ+
Sbjct: 1097 QLFVQIYVDDIIFGCSTHAVVVDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQT 1156
Query: 1363 KYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDIL 1422
KYTK+LL++F M TP+ T +L+ ++ V QK YR MIGSLLYLTASRPDI
Sbjct: 1157 KYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGEAVDQKEYRSMIGSLLYLTASRPDIQ 1216
Query: 1423 FSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTE 1482
F+V LCARFQ+ PR +H A+KRI+RYL T G+ Y +S LSGY DA + G R +
Sbjct: 1217 FAVCLCARFQASPRASHRQAVKRIMRYLNHTLEFGIWYSTSSSICLSGYSDADFGGCRID 1276
Query: 1483 RKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAIC 1523
RKSTSG C FLG++L++W+S++QS++A STAE+EY++AA C
Sbjct: 1277 RKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYVAAASC 1317
Score = 120 bits (301), Expect = 4e-25
Identities = 85/324 (26%), Positives = 150/324 (46%), Gaps = 37/324 (11%)
Query: 8 YNAKPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 67
++ KP +FDG F +W +M+S+ + + D+W + Y IP + T K
Sbjct: 7 FSTKPHIFDGTDFPHWCSKMQSYIMAENYDIWRKVSHPYV---------IPEAINTDALK 57
Query: 68 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKY 127
+ + KAR IL S IS +Y ++ E A I+ +LK H+G K +KE + ++Y
Sbjct: 58 TEFENNCKARNILSSGISRSDYDRVAHLETAHEIWNALKNFHQGTKNIKELRRDLFKKEY 117
Query: 128 ESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPES-----WMPLVTS 182
F M+ E++++ SRF +++ +R ++ SY + R W VTS
Sbjct: 118 IKFEMKSGEALDDYLSRFNKILSDLRSVDSSYDANYPQSEISRHFLNGLDMSIWEMKVTS 177
Query: 183 IELTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKA----LQA 238
I+ + ++ ++L+ L + LK E+ + + KS AL S S + S + L A
Sbjct: 178 IQESVNMSTLTLDSLYTKLKTREMNILS-RKVDSKSSALVSSSSSLIVDASSSMPSFLAA 236
Query: 239 EEEESEEASEDSDEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTC 298
S++ E +E++L L++ R+ R + +++ +G C
Sbjct: 237 FNATSDDQLEQIEEEDLALVANRIARAMNNARNRKRGGPN------------------RC 278
Query: 299 FECKESGHYKSDCPKLKKDKKPKK 322
FEC H +S CPKL + K+ K
Sbjct: 279 FECGSIDHLRSHCPKLGRGKREDK 302
>ref|XP_468929.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|28209450|gb|AAO37468.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1128
Score = 793 bits (2047), Expect = 0.0
Identities = 421/848 (49%), Positives = 564/848 (65%), Gaps = 34/848 (4%)
Query: 716 KIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALC 775
K+ + +NV L++ W+WHRRL H M ++S+LSK +LV GL ++KF D LC
Sbjct: 191 KVTFGDNSKRNVIGLVAKTSFGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLC 250
Query: 776 EACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWV 835
ACQ K K+++STSRPLELLH+DLFGP +SIGG + +VIVDDYS +TWV
Sbjct: 251 SACQASKQVACSHPTKSIMSTSRPLELLHMDLFGPTTYKSIGGNSHCLVIVDDYSCYTWV 310
Query: 836 KFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEF-----ESLFDSYGIAHDFSCP 890
FL K +F F + QNE +C +V++RSD+G +F E D I H+ S
Sbjct: 311 FFLHDKCIVAELFKKFAKRAQNEFSCTLVKIRSDNGSKFKNTNIEDYCDDLSIKHELSAT 370
Query: 891 RTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYE 950
+PQQNGVVERKNRTL EMARTML E G++ F AEA+NTAC+ NR+ + +L KT YE
Sbjct: 371 YSPQQNGVVERKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRLLKKTSYE 430
Query: 951 LWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTI 1010
L KPN++YF FGC CY+ RL KF+++ + LLGY+ SK +R YN + +
Sbjct: 431 LIVGRKPNVAYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGIV 490
Query: 1011 EESIHVRFDDKLDSDQS-KLVEKFADLSI-----NVSDKGKAPEEAEPE-----EDEPEE 1059
EE+ V+FD+ S + + ++ D + N+S P E E + +DEP
Sbjct: 491 EETADVQFDETNGSQEGHENLDDVGDEGLMRAMKNMSIGDVKPIEVEDKPSTSTQDEPST 550
Query: 1060 EAGPSDSQT-LKKSR-------------ITAAHPKELILGNKDEPVRTRSAFRPYEETLL 1105
A PS +Q ++K + ++ HP + +LG+ + V+TRS ++
Sbjct: 551 SASPSQAQVEVEKEKAQDPPMPPRIYTALSKDHPIDQVLGDISKGVQTRSPVA----SIC 606
Query: 1106 SLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRN 1165
VS +EPK +DEAL D DW+ A+ EELN F++N VW+LV++P +VIGTKWVFRN
Sbjct: 607 EHYSFVSCLEPKHVDEALYDPDWMNAIHEELNNFARNKVWTLVERPRDHNVIGTKWVFRN 666
Query: 1166 KLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDV 1225
K +E VVRNKARLVAQG++Q E +D+ ETF PVARLEAIR+L++F+ +I L QMDV
Sbjct: 667 KQDENRLVVRNKARLVAQGFTQVEDLDFGETFGPVARLEAIRILLAFASCFDIKLFQMDV 726
Query: 1226 KSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEF 1285
KSAFLNG I+E V+V QP GF+D K P+HV+KL K+LYGLKQAPRAWYERL FLL +F
Sbjct: 727 KSAFLNGEIAELVFVEQPPGFDDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDF 786
Query: 1286 VRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYF 1345
GKVDTTLF K DD + QIYVDDIIFGS N+ CKEF +MM EFEMSM+ EL +F
Sbjct: 787 KIGKVDTTLFTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIEELSFF 846
Query: 1346 LGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYR 1405
LG+Q+ Q +GT++ Q+KY K+LLK+F + ++ KTPM L+ ++ V KLYR
Sbjct: 847 LGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNWHLDLDEGGKPVDLKLYR 906
Query: 1406 GMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSE 1465
MIGSLLYLTASRPDI+FSV + ARFQ+ P+E HL A+KRILRYLK ++ + L Y K ++
Sbjct: 907 SMIGSLLYLTASRPDIMFSVCMYARFQAAPKECHLVAVKRILRYLKHSSTISLWYPKGAK 966
Query: 1466 YKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSV 1525
+KL GY D+ YAG + +RKSTSG+CQ LG +LVSW+SK+Q+++ALSTAEAEYISA C
Sbjct: 967 FKLVGYSDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYISAGSCCA 1026
Query: 1526 RPGFSEQV 1533
+ + +Q+
Sbjct: 1027 QLLWMKQI 1034
Score = 36.6 bits (83), Expect = 6.9
Identities = 18/43 (41%), Positives = 26/43 (59%), Gaps = 2/43 (4%)
Query: 609 WYLDSGCSRHMTGESRMFQ--ELKLKPGGEVGFGGNEKGKIVG 649
W LDS C++ MTG+ MF E++ K +V FG N K ++G
Sbjct: 162 WVLDSVCTQRMTGDRAMFTTFEVEGKEQEKVTFGDNSKRNVIG 204
>ref|NP_912905.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 940
Score = 754 bits (1946), Expect = 0.0
Identities = 410/811 (50%), Positives = 531/811 (64%), Gaps = 46/811 (5%)
Query: 753 SQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVK 812
SQ SK + GL N++F D +C ACQ GK KNV++T+RPLELLH+DLFGP+
Sbjct: 34 SQTSKARHILGLTNIQFEKDRVCSACQAGKQIGAHHPVKNVMTTTRPLELLHMDLFGPIA 93
Query: 813 TESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGG 872
SIGG +YG+VIVDD+S +TWV FL K E+ +F F + QNE +I +RSD+
Sbjct: 94 YLSIGGNKYGLVIVDDFSCFTWVFFLHDKSETQAIFKKFARRAQNEFDLKIKNIRSDNVK 153
Query: 873 EF-----ESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEA 927
EF ES D GI H+FS P +PQQNGV ERKNRTL E+ARTML E + F AEA
Sbjct: 154 EFKNTCIESFLDEEGIKHEFSAPYSPQQNGVAERKNRTLIEIARTMLDEYKTSDRFWAEA 213
Query: 928 VNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSK 987
VNT C+ NR+ + +L KTPYEL KPN+SYF FG CY+LN K R KF K
Sbjct: 214 VNTVCHDINRLYLHRLLKKTPYELLTGNKPNVSYFRVFGSKCYILNKKARSSKFAPKVDG 273
Query: 988 CLLLGYSERSKGFRFYNTDAKTIEESIHVRFD-------DKLDS-------DQSKLVEKF 1033
LLGY +R +N + +E + V FD +++DS D + +++
Sbjct: 274 GFLLGYGSNECAYRVFNKTSGIVEIAPDVTFDETNGSQVEQVDSHVLGEEEDPREAIKRL 333
Query: 1034 A-----------------DLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTLKKSRITA 1076
A + S + P + ++ E E+ PS S L RI
Sbjct: 334 ALGDVRPREPQQGASSSTQVEPPTSTQANDPSTSSLDQGEEGEQVPPS-SINLAHPRIHQ 392
Query: 1077 A----HPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEALQDKDWILAM 1132
+ HP + ILG+ ++ V TRS + E VS +EP ++EAL D DW++AM
Sbjct: 393 SIQRDHPTDNILGDINKGVSTRSHIANFCEHY----SFVSSLEPLRVEEALNDPDWVMAM 448
Query: 1133 EEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGID 1192
+EELN F++N+VW+LV++ +VIGTKW+FRNK +E G V+RNKARLVAQG++Q EG+D
Sbjct: 449 QEELNNFTRNEVWTLVERSRQ-NVIGTKWIFRNKQDEAGVVIRNKARLVAQGFTQIEGLD 507
Query: 1193 YTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFEDEKKP 1252
+ ETFAPVARLE+IR+L++F+ N N L+QMDVKSAFLNG I+E VYV QP GF+D K P
Sbjct: 508 FGETFAPVARLESIRILLTFATNLNFKLYQMDVKSAFLNGLINELVYVEQPPGFKDPKYP 567
Query: 1253 DHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDD 1312
+HV+KL K+LY LKQAPRAWYE L +FL++N F GK D+TLF K + +DI + QIYVDD
Sbjct: 568 NHVYKLHKALYELKQAPRAWYECLRNFLVKNGFEIGKADSTLFTKRHDNDIFVCQIYVDD 627
Query: 1313 IIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKF 1372
IIFGS N+S +EFS MM FEMSMMGELK+FLG+Q+ Q EGT+I Q+KY K++LKKF
Sbjct: 628 IIFGSTNKSFSEEFSRMMTKRFEMSMMGELKFFLGLQIKQLKEGTFICQTKYLKDMLKKF 687
Query: 1373 NMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSVHLCARFQ 1432
M + TPM L+ ++ V QK+YR +IGSLLYL ASRPDI+ SV +CARFQ
Sbjct: 688 GMENAKPIHTPMPSNGHLDLNEQGKDVDQKVYRSIIGSLLYLCASRPDIMLSVCMCARFQ 747
Query: 1433 SDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTSGNCQF 1492
+ P+E HL A+KRILRYL T NLGL Y K + + L GY DA YAG + +RKSTSG CQF
Sbjct: 748 AAPKECHLVAVKRILRYLVHTPNLGLWYPKGARFDLIGYADADYAGCKVDRKSTSGTCQF 807
Query: 1493 LGSNLVSWASKRQSTIALSTAEAEYISAAIC 1523
LG +LVSW+SK+Q+++ALSTAEAEYIS C
Sbjct: 808 LGRSLVSWSSKKQNSVALSTAEAEYISTGSC 838
>gb|AAW57789.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1799
Score = 751 bits (1939), Expect = 0.0
Identities = 430/953 (45%), Positives = 569/953 (59%), Gaps = 68/953 (7%)
Query: 605 KHQSWYLDSGCSRHMTGESRMFQELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPCIDN 663
+ SW +DSGCSRHMTGE++ F L G E + FG G+++ GTI V+ + +
Sbjct: 775 RSNSWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKD 834
Query: 664 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELE 723
V LV L +NLLS+SQL D+ +V F + R + + V F+ R ++
Sbjct: 835 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 893
Query: 724 AQNVKCLL-SVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 782
+CL+ S N + + WHRRLGH +S++S ++L+RGLP LK D +C C+ GK
Sbjct: 894 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGK 953
Query: 783 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGK------RYGMVIVDDYSRWTWVK 836
T K +V T P +LLH+D GP + +S+GGK + +++V W W
Sbjct: 954 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWRKHLASFSLLLV----VWLW-S 1008
Query: 837 FLTRKDESHVVFSTF-IAQVQNEKACRIVRVRSDHGGEFESLFDSYGIAHDFSCPRTPQQ 895
FL V+F F + N K H L +S H FS P PQQ
Sbjct: 1009 FL-------VLFEPFAVIMALNSKIL--------HLNLSVILLES---NHQFSSPYVPQQ 1050
Query: 896 NGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNI 955
NGVVERKNRTL EMARTML E + F EA++ AC+I NR+ +R IL+KTPYEL
Sbjct: 1051 NGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGR 1110
Query: 956 KPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIH 1015
+P +S+ FGC C+VL + L KF+++S + LGY+ S+ +R Y I E+
Sbjct: 1111 RPKVSHLRVFGCKCFVLKS-GNLDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCE 1169
Query: 1016 VRF---------------------DDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEE 1054
V F D+ D D + D + V + G +P P
Sbjct: 1170 VTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSISPPLDSTPPVQETG-SPLTTSPSG 1228
Query: 1055 DEP------EEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLK 1108
D P EE S I HP + ++G E V TR+ R YE L
Sbjct: 1229 DAPTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERV-TRN--RSYE---LVNS 1282
Query: 1109 GLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLN 1168
V+ EPK++ AL D++W+ AM EEL F +N VWSLV+ P VIGTKWVF+NKL
Sbjct: 1283 AFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFSVIGTKWVFKNKLG 1342
Query: 1169 EKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSA 1228
E G +VRNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+L++F+ + L QMDVKSA
Sbjct: 1343 EDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSA 1402
Query: 1229 FLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRG 1288
FLNG I EEVYV QP GFE+ K P+HVFKL K+LYGLKQAPRAWYERL +FLL+N F G
Sbjct: 1403 FLNGVIEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMG 1462
Query: 1289 KVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGI 1348
VD TLF D L+VQIYVDDIIFG ++ +L +F ++M EFEMSMMGEL +FLG+
Sbjct: 1463 AVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFFDVMSREFEMSMMGELTFFLGL 1522
Query: 1349 QVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMI 1408
Q+ QT EG ++HQ+KY+KELLKKF+M + TPM T L ++ +V Q+ YR MI
Sbjct: 1523 QIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMI 1582
Query: 1409 GSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKL 1468
GSLLYLTASRPDI FSV LCARFQ+ PR +H A+KRI RY+K T G+ Y +S +
Sbjct: 1583 GSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSV 1642
Query: 1469 SGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1521
+ DA +AG + +RKSTSG C FLG++LVSW+S++QS++A STAEAEY++AA
Sbjct: 1643 RAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAA 1695
Score = 136 bits (343), Expect = 5e-30
Identities = 100/365 (27%), Positives = 172/365 (46%), Gaps = 49/365 (13%)
Query: 8 YNAKPPMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 67
Y+ KP +FDG F WK RME++ ++W+ + Y P D D +T
Sbjct: 5 YSMKPFVFDGHNFVIWKARMEAYLPSQGHNVWNKVKSPYTVPDDVD--------ITPANM 56
Query: 68 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKY 127
+++AR ++ IS E+ ++ + A ++ +L HEGN ++ ++ ++Y
Sbjct: 57 AQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLNQ---FHKEY 113
Query: 128 ESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPES-WMPLVTSIELT 186
+ F M P ESI+ F RF +V+ +R + K ++ D+ ++ CL W VTSI +
Sbjct: 114 QRFEMHPGESIDSYFKRFGEIVSKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITES 173
Query: 187 RDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKA-------LQAE 239
+ +++++L S LK HE+ + L K S+AL + + + A L A
Sbjct: 174 APLSELTMDKLYSKLKTHEMDVFHRKGL-KHSMALVADPSGSTSSNDSAFVCGGFSLAAL 232
Query: 240 EEESEEASEDSDEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCF 299
+EE E ED+L L +++ +R +K+ + + +G + + CF
Sbjct: 233 HSVTEEQLEKIPEDDLALFARKFSRAYKNVRDRKRG---------------KTNEPFVCF 277
Query: 300 ECKESGHYKSDCPKLKK--DKKPKK----HFKTKKSLM--------VTFDESESEDVDSD 345
EC E H + +CPKLKK DK KK K KK LM +E + D+DSD
Sbjct: 278 ECGEPNHIRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSD 337
Query: 346 GESKD 350
+ ++
Sbjct: 338 DDDQE 342
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.323 0.137 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,474,145,896
Number of Sequences: 2540612
Number of extensions: 102553181
Number of successful extensions: 467959
Number of sequences better than 10.0: 4979
Number of HSP's better than 10.0 without gapping: 2012
Number of HSP's successfully gapped in prelim test: 3137
Number of HSP's that attempted gapping in prelim test: 435451
Number of HSP's gapped (non-prelim): 18820
length of query: 1562
length of database: 863,360,394
effective HSP length: 142
effective length of query: 1420
effective length of database: 502,593,490
effective search space: 713682755800
effective search space used: 713682755800
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0151.11