BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0136.12
(245 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB08232.1| unnamed protein product [Arabidopsis thaliana] g... 233 4e-60
gb|AAM62683.1| arabinogalactan protein-like [Arabidopsis thaliana] 233 5e-60
gb|AAO92753.1| arabinogalactan protein [Gossypium hirsutum] 230 3e-59
gb|AAN18099.1| At5g60490/muf9_140 [Arabidopsis thaliana] gi|1529... 229 4e-59
gb|AAT37956.1| fasciclin-like AGP 13 [Populus alba x Populus tre... 228 1e-58
gb|AAT37954.1| fasciclin-like AGP 11 [Populus alba x Populus tre... 225 1e-57
gb|AAT37952.1| fasciclin-like AGP 9 [Populus alba x Populus trem... 225 1e-57
gb|AAD56235.1| arabinogalactan protein Pop14A9 [Populus x canesc... 219 7e-56
gb|AAT37958.1| fasciclin-like AGP 15 [Populus alba x Populus tre... 218 2e-55
gb|AAM62616.1| arabinogalactan protein-like [Arabidopsis thaliana] 213 3e-54
gb|AAT37957.1| fasciclin-like AGP 14 [Populus alba x Populus tre... 213 5e-54
emb|CAB86084.1| arabinogalactan protein-like [Arabidopsis thalia... 212 6e-54
gb|AAT37951.1| fasciclin-like AGP 8 [Populus alba x Populus trem... 204 2e-51
gb|AAT37947.1| fasciclin-like AGP 4 [Populus alba x Populus trem... 199 4e-50
gb|AAT37944.1| fasciclin-like AGP 1 [Populus alba x Populus trem... 197 2e-49
ref|XP_493761.1| unnamed protein product [Oryza sativa (japonica... 192 9e-48
ref|XP_550213.1| putative arabinogalactan protein [Oryza sativa ... 192 9e-48
gb|AAT37946.1| fasciclin-like AGP 3 [Populus alba x Populus trem... 191 1e-47
gb|AAT37949.1| fasciclin-like AGP 6 [Populus alba x Populus trem... 191 2e-47
gb|AAT37948.1| fasciclin-like AGP 5 [Populus alba x Populus trem... 187 2e-46
>dbj|BAB08232.1| unnamed protein product [Arabidopsis thaliana]
gi|15239344|ref|NP_200857.1| fasciclin-like
arabinogalactan-protein (FLA12) [Arabidopsis thaliana]
Length = 249
Score = 233 bits (594), Expect = 4e-60
Identities = 126/248 (50%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSS-SPTDIIRILKKAGGYTTLIRLLQTT 59
M+H L L L+ + L+ SPA AP+ PT++ +IL+KAG +T IRLL++T
Sbjct: 1 MEHSLIILLFTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKST 60
Query: 60 QVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSN 119
VA Q+ QL NS+ G+T FAP+D++F+ LK G LNSL D+Q+ ELIQFH++P++VS SN
Sbjct: 61 GVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSN 120
Query: 120 FDTLSNPVRTQAGENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKV 178
F T+SNP+RTQAG++ D LNVT+SGNTVN+T+G+ N TV G+VYSD QLAVYQVDKV
Sbjct: 121 FQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKV 180
Query: 179 LLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPL-AVAMV 237
LLP+ F +PPAPAPAP +K+ KKK DD++ + D A S R V AV+
Sbjct: 181 LLPQQVFDPRPPAPAPAPSVSKSKKKK--DDSDSSSDDSPADASFALRNVGSVCDAVSFC 238
Query: 238 VVAAFSSW 245
V++ +W
Sbjct: 239 VMSVMLAW 246
>gb|AAM62683.1| arabinogalactan protein-like [Arabidopsis thaliana]
Length = 248
Score = 233 bits (593), Expect = 5e-60
Identities = 127/248 (51%), Positives = 173/248 (69%), Gaps = 6/248 (2%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSS-SPTDIIRILKKAGGYTTLIRLLQTT 59
M+H L L L ++ + TL+ SPA AP+ PT++ +IL+KAG +T IRLL++T
Sbjct: 1 MEHSLIIL-LFTVLLLTTTPGTLSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKST 59
Query: 60 QVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSN 119
VA Q+ QL NS+ G+T FAP+D++F+ LK G LNSL D+Q+ ELIQFH++P++VS SN
Sbjct: 60 GVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSN 119
Query: 120 FDTLSNPVRTQAGENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKV 178
F T+SNP+RTQAG++ D LNVT+SGNTVN+T+G+ N TV G+VYSD QLAVYQVDKV
Sbjct: 120 FQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKV 179
Query: 179 LLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPL-AVAMV 237
LLP+ F +PPAPAPAP +K+ KKK DD++ + D A S R V AV+
Sbjct: 180 LLPQQVFDPRPPAPAPAPSVSKSKKKK--DDSDSSSDDSPADASFALRNVGSVCDAVSFC 237
Query: 238 VVAAFSSW 245
V++ +W
Sbjct: 238 VMSVMLAW 245
>gb|AAO92753.1| arabinogalactan protein [Gossypium hirsutum]
Length = 243
Score = 230 bits (586), Expect = 3e-59
Identities = 121/235 (51%), Positives = 165/235 (69%), Gaps = 4/235 (1%)
Query: 7 TLPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQIN 66
TL LL L STT A + APAPS PT++ +IL+KAG +T IRLL++TQVA Q+
Sbjct: 9 TLTLLILFSLSCSTTLAQAPALAPAPSG-PTNVTKILEKAGQFTLFIRLLKSTQVANQLL 67
Query: 67 AQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNP 126
QL NSN G+T FAP DNAFS+LK G LNSL D+QK EL+QFH++PT+++ S F T+SNP
Sbjct: 68 GQLNNSNNGMTVFAPTDNAFSSLKSGTLNSLTDEQKVELVQFHIVPTYLTSSQFQTISNP 127
Query: 127 VRTQAGENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFF 185
+RTQAG++ D + LN+T+SGN+VN+TTG+ N +V G++Y+D QLAVYQ+D+VL P F
Sbjct: 128 LRTQAGDSGDGKFPLNITTSGNSVNITTGLTNTSVSGTIYTDGQLAVYQIDQVLQPLQIF 187
Query: 186 VAKPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVVA 240
+PPAPAPAP K+K K + D+ D++ + Q + G VA +V+A
Sbjct: 188 APRPPAPAPAPAKSKNKKATTVADSPDVTPADNSKAATLQNV--GLFGVAALVIA 240
>gb|AAN18099.1| At5g60490/muf9_140 [Arabidopsis thaliana]
gi|15294288|gb|AAK95321.1| AT5g60490/muf9_140
[Arabidopsis thaliana]
Length = 239
Score = 229 bits (585), Expect = 4e-59
Identities = 120/223 (53%), Positives = 161/223 (71%), Gaps = 5/223 (2%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSS-SPTDIIRILKKAGGYTTLIRLLQTT 59
M+H L L L+ + L+ SPA AP+ PT++ +IL+KAG +T IRLL++T
Sbjct: 1 MEHSLIILLFTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKST 60
Query: 60 QVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSN 119
VA Q+ QL NS+ G+T FAP+D++F+ LK G LNSL D+Q+ ELIQFH++P++VS SN
Sbjct: 61 GVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSN 120
Query: 120 FDTLSNPVRTQAGENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKV 178
F T+SNP+RTQAG++ D LNVT+SGNTVN+T+G+ N TV G+VYSD QLAVYQVDKV
Sbjct: 121 FQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKV 180
Query: 179 LLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAV 221
LLP+ F +PPAPAPAP +K+ KKK D+ + DDS A+
Sbjct: 181 LLPQQVFDPRPPAPAPAPSVSKSKKKKDDSDS---SSDDSPAM 220
>gb|AAT37956.1| fasciclin-like AGP 13 [Populus alba x Populus tremula]
Length = 239
Score = 228 bits (580), Expect = 1e-58
Identities = 128/245 (52%), Positives = 169/245 (68%), Gaps = 11/245 (4%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQ 60
M+ QL + + LMFF +S+TT+A +P+PAPS PT+I IL+KAG +TTLIRL+++TQ
Sbjct: 1 MRKQLLSPFVPFLMFFLYSSTTVA-QTPSPAPSG-PTNITAILEKAGQFTTLIRLMKSTQ 58
Query: 61 VATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNF 120
A QIN QL NSN GLT FAP DNAF+NLK G LNSL+DQQK +L+QFH++P F+SMS+F
Sbjct: 59 EADQINTQLNNSNQGLTVFAPPDNAFANLKAGALNSLSDQQKVQLVQFHIIPNFLSMSSF 118
Query: 121 DTLSNPVRTQAGENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVL 179
T+SNP+RTQAG + D LNVT+SGN VN+TTG+ TV ++++D QL VYQVD+VL
Sbjct: 119 QTVSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGVNTATVANTIFTDGQLVVYQVDQVL 178
Query: 180 LPRDFF-VAKPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVV 238
LP D F A PAPAP+ K A E + D S A ++V++V+
Sbjct: 179 LPLDLFGTAAAPAPAPSKPDKDVPAKAPAGSKEDASADASGATI-------ATVSVSLVL 231
Query: 239 VAAFS 243
+AA S
Sbjct: 232 IAAIS 236
>gb|AAT37954.1| fasciclin-like AGP 11 [Populus alba x Populus tremula]
Length = 238
Score = 225 bits (573), Expect = 1e-57
Identities = 126/227 (55%), Positives = 157/227 (68%), Gaps = 7/227 (3%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQ 60
M+ QL P + + F ++T A +P+PAPS PT+I IL KAG +TTLIRLL++TQ
Sbjct: 1 MRKQLLISPFVPFLMLFLYSSTAFAQTPSPAPSG-PTNITAILAKAGQFTTLIRLLKSTQ 59
Query: 61 VATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNF 120
A QIN QL NSN GLT FAP DN+F+NLK G LNSL+DQQK +L+QFH+LP F+SMSNF
Sbjct: 60 EADQINTQLNNSNQGLTVFAPTDNSFANLKAGTLNSLSDQQKVQLVQFHILPNFLSMSNF 119
Query: 121 DTLSNPVRTQAGENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVL 179
T+SNP+RTQAG + D LNVT+SGN VN+TTG+ TV ++Y+D QL VYQVD+VL
Sbjct: 120 QTVSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGVDTATVANTIYTDGQLVVYQVDQVL 179
Query: 180 LPRDFFVAKPPAPAPA-PEK---AKASKKKSADDTEGPAGDDSAAVS 222
LP D F PAPAP+ PEK AKA D + +G A VS
Sbjct: 180 LPLDLF-GTAPAPAPSKPEKDVPAKAPAGSKEDASVDASGASIATVS 225
>gb|AAT37952.1| fasciclin-like AGP 9 [Populus alba x Populus tremula]
Length = 268
Score = 225 bits (573), Expect = 1e-57
Identities = 122/271 (45%), Positives = 170/271 (62%), Gaps = 31/271 (11%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLAAS-------------------SPAPAPSSS------ 35
M Q +L ++FF H T TL S +P+ APS+
Sbjct: 1 MGQQSLSLLFSLILFFLHCTKTLGQSPAAAPVMPPPTTPVKAPPTAPSQAPSAQVATSPG 60
Query: 36 PTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLN 95
P D+I+IL+KAG +T +RL+Q T T++N +L +N G+T FAP+DNAFS+LK GFLN
Sbjct: 61 PVDVIKILQKAGHFTVFVRLMQATTEDTELNKELNKTNNGITIFAPSDNAFSSLKAGFLN 120
Query: 96 SLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGI 155
+L+D+ K EL++FH+LP F+S S F T+SNPVRTQAG P R+ LNVT++GN VN+TTG+
Sbjct: 121 ALSDEDKTELVKFHVLPAFISSSQFQTVSNPVRTQAGTGP-RVTLNVTTTGNFVNITTGL 179
Query: 156 VNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAG 215
N ++ G+VY+D+QLA+YQ+DKVL P D F KPPAPAPAPE K +K+A E P
Sbjct: 180 TNASISGTVYTDSQLAIYQIDKVLFPLDIFTPKPPAPAPAPELGK--PRKAAPGVESPTA 237
Query: 216 DDSAAVSVKQRLVWGP---LAVAMVVVAAFS 243
+ ++ ++ LAV+ +V A FS
Sbjct: 238 PKDTSDALTPLILHNNALLLAVSCMVAAIFS 268
>gb|AAD56235.1| arabinogalactan protein Pop14A9 [Populus x canescens]
Length = 240
Score = 219 bits (557), Expect = 7e-56
Identities = 116/211 (54%), Positives = 150/211 (70%), Gaps = 5/211 (2%)
Query: 13 LMFFFHSTTTLAASSPAPAPSS-SPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLIN 71
L F H LA SPA AP+ P ++ ++L+K G ++ IRLL+ TQ +N QL N
Sbjct: 13 LFFLLHCPPALA-QSPAAAPAPPGPINVTKVLEKGGQFSAFIRLLKATQEDVTLNGQLNN 71
Query: 72 SNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQA 131
+N +T FAP+DNAFS+LK G LNSL+DQ+K EL+QFH++P F+S S F T+SNP+ TQA
Sbjct: 72 TNNAITIFAPSDNAFSSLKSGTLNSLSDQEKAELVQFHIIPQFLSSSQFQTVSNPLTTQA 131
Query: 132 GENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPA 191
G RL LNVT++GN+VN+TTG+ N +V G++Y+DNQLAV+QVDKVLLP D F KPP
Sbjct: 132 GSG-GRLELNVTTTGNSVNITTGLTNTSVSGTIYTDNQLAVHQVDKVLLPLDIFTPKPPT 190
Query: 192 PAPAPEKAKASKKKSADDTEGPAGDDSAAVS 222
PAPAPEK K + K+A E PA D S AVS
Sbjct: 191 PAPAPEKPK-KRSKAAASPESPA-DTSGAVS 219
>gb|AAT37958.1| fasciclin-like AGP 15 [Populus alba x Populus tremula]
Length = 240
Score = 218 bits (554), Expect = 2e-55
Identities = 116/211 (54%), Positives = 150/211 (70%), Gaps = 5/211 (2%)
Query: 13 LMFFFHSTTTLAASSPAPAPSS-SPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLIN 71
L F H LA SPA AP+ P ++ ++L+K G ++ IRLL+ TQ +N QL N
Sbjct: 13 LFFLLHCPPALA-QSPAAAPAPPGPINVTKVLEKGGQFSVFIRLLKATQEDVTLNGQLNN 71
Query: 72 SNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQA 131
+N +T FAP+D+AFS+LK G LNSL+DQ+K EL+QFH++P F+S S F T+SNP+ TQA
Sbjct: 72 TNNAITIFAPSDSAFSSLKSGTLNSLSDQEKAELVQFHIIPQFLSSSLFQTVSNPLTTQA 131
Query: 132 GENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPA 191
G RL LNVT++GN+VN+TTG+ N +V G++Y+DNQLAVYQVDKVLLP D F KPP
Sbjct: 132 GSG-GRLELNVTTTGNSVNITTGLTNTSVSGTIYTDNQLAVYQVDKVLLPLDIFTPKPPT 190
Query: 192 PAPAPEKAKASKKKSADDTEGPAGDDSAAVS 222
PAPAPEK K + K+A E PA D S AVS
Sbjct: 191 PAPAPEKPK-KRSKAAASPESPA-DTSGAVS 219
>gb|AAM62616.1| arabinogalactan protein-like [Arabidopsis thaliana]
Length = 246
Score = 213 bits (543), Expect = 3e-54
Identities = 123/234 (52%), Positives = 159/234 (67%), Gaps = 7/234 (2%)
Query: 13 LMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINS 72
L FF T +PAP PS PT+I IL+KAG +T IRLL++TQ + QIN QL +S
Sbjct: 12 LFIFFLVLATTYGQAPAPGPSG-PTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSS 70
Query: 73 NA-GLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQA 131
++ GLT FAP DNAF++LK G LNSL+DQQK +L+QFH+LPT ++M F T+SNP+RTQA
Sbjct: 71 SSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQA 130
Query: 132 GENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPP 190
G+ + + LN+TSSGN VN+TTG+V+ TV SVYSD QLAVYQVD+VLLP F
Sbjct: 131 GDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GSSV 189
Query: 191 APAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVVAAFSS 244
APAPAPEK + K SA + G G DS S +R +G + + VAA ++
Sbjct: 190 APAPAPEKGGSVSKGSA--SGGDDGGDSTDSSDAERTAFG-FGIRITTVAAIAA 240
>gb|AAT37957.1| fasciclin-like AGP 14 [Populus alba x Populus tremula]
Length = 243
Score = 213 bits (541), Expect = 5e-54
Identities = 116/234 (49%), Positives = 157/234 (66%), Gaps = 3/234 (1%)
Query: 11 LALMFFFHSTTTLAASSPAPAPSS-SPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQL 69
L L+ + TT A SPAPAP+ PT++I+ILKKAG + T IRLL++TQ+ + +N+QL
Sbjct: 11 LYLLILAINLTTTTAQSPAPAPAPPGPTNVIKILKKAGHFKTFIRLLKSTQLDSNLNSQL 70
Query: 70 INSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRT 129
N+N GLT FAP+D+AFS LK G ++SL DQ+K EL+QFH++P F+S S FDT+S+P++T
Sbjct: 71 GNTNNGLTIFAPSDSAFSALKTGTVHSLTDQEKVELMQFHIVPMFISSSQFDTVSSPLKT 130
Query: 130 QAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKP 189
AG R LNVT+SG+++N++TG+ N T+ VY+D LA+YQVDKVLLP D F KP
Sbjct: 131 HAGSGA-RFQLNVTASGSSLNISTGLTNTTISDIVYTDTHLAIYQVDKVLLPLDIFTPKP 189
Query: 190 PAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVVAAFS 243
P PAPAP + +S DD D S+AVS V VV +FS
Sbjct: 190 PPPAPAPAPKLKEESESPDDAVSKK-DISSAVSFVMHHDTVFFIVGTVVAISFS 242
>emb|CAB86084.1| arabinogalactan protein-like [Arabidopsis thaliana]
gi|14532750|gb|AAK64076.1| putative arabinogalactan
protein [Arabidopsis thaliana]
gi|13430542|gb|AAK25893.1| putative arabinogalactan
protein [Arabidopsis thaliana]
gi|9757768|dbj|BAB08377.1| unnamed protein product
[Arabidopsis thaliana] gi|15242651|ref|NP_195937.1|
fasciclin-like arabinogalactan-protein (FLA11)
[Arabidopsis thaliana] gi|11281995|pir||T48338
arabinogalactan protein-like - Arabidopsis thaliana
Length = 246
Score = 212 bits (540), Expect = 6e-54
Identities = 123/234 (52%), Positives = 159/234 (67%), Gaps = 7/234 (2%)
Query: 13 LMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINS 72
L FF T +PAP PS PT+I IL+KAG +T IRLL++TQ + QIN QL +S
Sbjct: 12 LFIFFLVIATTYGQAPAPGPSG-PTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSS 70
Query: 73 NA-GLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQA 131
++ GLT FAP DNAF++LK G LNSL+DQQK +L+QFH+LPT ++M F T+SNP+RTQA
Sbjct: 71 SSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQA 130
Query: 132 GENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPP 190
G+ + + LN+TSSGN VN+TTG+V+ TV SVYSD QLAVYQVD+VLLP F
Sbjct: 131 GDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GSSV 189
Query: 191 APAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVVAAFSS 244
APAPAPEK + K SA + G G DS S +R +G + + VAA ++
Sbjct: 190 APAPAPEKGGSVSKGSA--SGGDDGGDSTDSSDAERTGFG-FGIRITTVAAIAA 240
>gb|AAT37951.1| fasciclin-like AGP 8 [Populus alba x Populus tremula]
Length = 269
Score = 204 bits (519), Expect = 2e-51
Identities = 110/238 (46%), Positives = 149/238 (62%), Gaps = 28/238 (11%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLA---ASSPAPAP----------------------SSS 35
M+ Q L L + FF H T TL A++PA AP S
Sbjct: 1 MRPQSVILALSLIFFFLHCTKTLCQSPAAAPAMAPPKTPVKAPPADSSQAPSAQVATSPG 60
Query: 36 PTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLN 95
P DI +IL+KAG +T RL+Q T T++N +L N+N G+T AP D+AFS LK GFLN
Sbjct: 61 PVDINKILQKAGHFTVFARLMQATTEDTELNKELNNTNNGITILAPTDSAFSTLKAGFLN 120
Query: 96 SLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGI 155
SL+D+ K EL++FH+LP F+S S F T+SNPVRTQAG P R+ LNVT++GN VN+++G+
Sbjct: 121 SLSDEDKTELVKFHVLPAFISTSQFQTVSNPVRTQAGTGP-RVTLNVTTTGNFVNISSGL 179
Query: 156 VNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGP 213
N ++ G+VY+D+QLA+YQ+DK L P + F KPPAP P P A +K+A + E P
Sbjct: 180 TNASISGTVYTDSQLAIYQLDKGLFPLEVFSPKPPAPGPEP--ALGKPRKAAPEAESP 235
>gb|AAT37947.1| fasciclin-like AGP 4 [Populus alba x Populus tremula]
Length = 266
Score = 199 bits (507), Expect = 4e-50
Identities = 113/254 (44%), Positives = 160/254 (62%), Gaps = 27/254 (10%)
Query: 14 MFFFHSTTTLAASSPAPAPSSSP---------------------TDIIRILKKAGGYTTL 52
+ F H TTT A +SPA P+ +P T++ +IL+KAG +T
Sbjct: 15 LLFLHCTTTFAQTSPAATPAQAPAVVVAQPPAATPTQAAQPHGITNVTKILEKAGHFTIF 74
Query: 53 IRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLP 112
IRLL++TQ + + L +S++G+T FAP D+AFS LK G LN+L+D K+EL++FH++P
Sbjct: 75 IRLLRSTQEENHLFSALNDSSSGVTIFAPTDSAFSELKSGTLNTLSDGDKSELVKFHVVP 134
Query: 113 TFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAV 172
TF+S S F T+SNP+ T AG +RL LNVTS N+VN+TTG+ N ++ G+VY+DNQLA+
Sbjct: 135 TFLSTSQFQTVSNPLGTWAGTG-NRLPLNVTSYPNSVNITTGLTNTSLSGTVYTDNQLAI 193
Query: 173 YQVDKVLLPRDFFVAKPPAPAP-APEKAKASKKKSADDTEGPAG--DDSAAVSVKQRLVW 229
Y+++KVLLP+D F +K PAPAP AP K +K A E P D S A+ Q V
Sbjct: 194 YKIEKVLLPKDIFASKAPAPAPVAPAPEKPTKAVPAATVESPVAPVDISGALMFTQNQVV 253
Query: 230 GPLAVAMVVVAAFS 243
G +V +V A F+
Sbjct: 254 G--SVGIVAAAMFA 265
>gb|AAT37944.1| fasciclin-like AGP 1 [Populus alba x Populus tremula]
Length = 263
Score = 197 bits (502), Expect = 2e-49
Identities = 118/266 (44%), Positives = 162/266 (60%), Gaps = 27/266 (10%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSSSP--------------------TDII 40
MK Q + F H T T A SPA AP+ +P T++
Sbjct: 1 MKPQYLLSSFSIFLLFLHCTNTFA-QSPAAAPAQAPAVVASPPAATPTQAAAPHGITNVT 59
Query: 41 RILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQ 100
+IL+KAG +T IRLL++TQ + + L +S+ GLT FAP D+AFS LK G LN+L+D
Sbjct: 60 KILEKAGHFTIFIRLLRSTQEENHLFSALNDSSTGLTIFAPTDSAFSELKSGTLNTLSDG 119
Query: 101 QKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTV 160
K+EL++FH++PTF+S S F T+SNP+ T AG RL LNVTS N+VN+TTG+ N ++
Sbjct: 120 DKSELVKFHVVPTFLSTSQFRTVSNPLGTWAGTG-SRLPLNVTSYPNSVNITTGLTNTSL 178
Query: 161 GGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAP-APEKAKASKKKSADDTEGPAG--DD 217
G+VY+DNQLA+Y+++KVLLP+D F + PAPAP AP K +K A E PA D
Sbjct: 179 SGTVYTDNQLAIYKIEKVLLPKDIFASNAPAPAPVAPAPEKPTKAVPAVTVESPAASVDV 238
Query: 218 SAAVSVKQRLVWGPLAVAMVVVAAFS 243
S+A+ V LV G +V ++ A FS
Sbjct: 239 SSALIVTHNLVVG--SVGLLASAMFS 262
>ref|XP_493761.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|9757679|dbj|BAB08198.1| EST D25138(R3286) corresponds
to a region of the predicted gene.~Similar to Pinus
taeda arabinogalactan-like protein (U09556) [Oryza
sativa (japonica cultivar-group)]
Length = 255
Score = 192 bits (487), Expect = 9e-48
Identities = 108/233 (46%), Positives = 146/233 (62%), Gaps = 6/233 (2%)
Query: 19 STTTLAASSPAPAPSSSPT-DIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLT 77
+T A+ APAP+S+ T +I +L KAG + TLIRL+++T A QI+ QL +S GLT
Sbjct: 20 ATPAAPATPAAPAPASTKTTNITGVLAKAGQFNTLIRLMRSTGAAEQIDNQLNSSRNGLT 79
Query: 78 FFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGEN-PD 136
FAP DNAF++L G LNSL+DQQKN L+Q+H+L T + MS FDT+SNP+RTQAG N P
Sbjct: 80 VFAPTDNAFTSLPSGTLNSLSDQQKNSLVQYHVLSTLIPMSQFDTVSNPLRTQAGSNSPG 139
Query: 137 RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAP-A 195
+ LNVT+ G VN++TG+VN TVG ++Y+ + L VYQVDKVLLP + PAPAP +
Sbjct: 140 QYPLNVTAEGQQVNISTGVVNATVGNALYTGDNLVVYQVDKVLLPMAIYSTPAPAPAPLS 199
Query: 196 PEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAM---VVVAAFSSW 245
P K K + + P D+ + L + VV+A S W
Sbjct: 200 PATKKKGKTPATSVADAPEAADATPDATTPSLAAARVTAGAGVGVVLALASVW 252
>ref|XP_550213.1| putative arabinogalactan protein [Oryza sativa (japonica
cultivar-group)] gi|54290196|dbj|BAD61084.1| putative
arabinogalactan protein [Oryza sativa (japonica
cultivar-group)]
Length = 269
Score = 192 bits (487), Expect = 9e-48
Identities = 108/233 (46%), Positives = 146/233 (62%), Gaps = 6/233 (2%)
Query: 19 STTTLAASSPAPAPSSSPT-DIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLT 77
+T A+ APAP+S+ T +I +L KAG + TLIRL+++T A QI+ QL +S GLT
Sbjct: 34 ATPAAPATPAAPAPASTKTTNITGVLAKAGQFNTLIRLMRSTGAAEQIDNQLNSSRNGLT 93
Query: 78 FFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGEN-PD 136
FAP DNAF++L G LNSL+DQQKN L+Q+H+L T + MS FDT+SNP+RTQAG N P
Sbjct: 94 VFAPTDNAFTSLPSGTLNSLSDQQKNSLVQYHVLSTLIPMSQFDTVSNPLRTQAGSNSPG 153
Query: 137 RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAP-A 195
+ LNVT+ G VN++TG+VN TVG ++Y+ + L VYQVDKVLLP + PAPAP +
Sbjct: 154 QYPLNVTAEGQQVNISTGVVNATVGNALYTGDNLVVYQVDKVLLPMAIYSTPAPAPAPLS 213
Query: 196 PEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAM---VVVAAFSSW 245
P K K + + P D+ + L + VV+A S W
Sbjct: 214 PATKKKGKTPATSVADAPEAADATPDATTPSLAAARVTAGAGVGVVLALASVW 266
>gb|AAT37946.1| fasciclin-like AGP 3 [Populus alba x Populus tremula]
Length = 266
Score = 191 bits (486), Expect = 1e-47
Identities = 112/259 (43%), Positives = 158/259 (60%), Gaps = 30/259 (11%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSSSP---------------------TDI 39
MK Q L + F H T A SPA AP+ +P T++
Sbjct: 1 MKQQHSLSSFLFFLLFLHCANTFA-QSPAAAPAQTPAAVVAQPPATTPTQAAQPHGITNV 59
Query: 40 IRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLND 99
+IL+KAG + IRLL++TQ + + + L +S++G+T FAP D+AFS LK G LN+L+D
Sbjct: 60 TKILEKAGHFAIFIRLLRSTQEESHLFSALNDSSSGVTIFAPTDSAFSELKSGTLNTLSD 119
Query: 100 QQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVT 159
K+EL++FH++PTF+S S F T+SNP+ T AG RL LNVTS N+VN+TTG+ N +
Sbjct: 120 GDKSELVKFHVVPTFLSTSQFQTVSNPLGTWAGTG-SRLPLNVTSYPNSVNITTGLTNTS 178
Query: 160 VGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAP---APEKAKASKKKSADDTEGPAG- 215
+ G+VY+DNQLA+Y+++KVLLP+D F +K PAPAP APE K +K A E P
Sbjct: 179 LSGTVYTDNQLAIYKIEKVLLPKDIFASKAPAPAPVALAPE--KPTKAVPAATVESPVAP 236
Query: 216 -DDSAAVSVKQRLVWGPLA 233
D S+A+ ++W LA
Sbjct: 237 VDISSALMFAHIMLWDQLA 255
>gb|AAT37949.1| fasciclin-like AGP 6 [Populus alba x Populus tremula]
Length = 269
Score = 191 bits (485), Expect = 2e-47
Identities = 112/261 (42%), Positives = 160/261 (60%), Gaps = 22/261 (8%)
Query: 2 KHQLFTLPLLALMF-----FFHSTTTLAASSPA----------PAPSSSP---TDIIRIL 43
+H +F+ +L L F S T A +PA P +++P T++ +IL
Sbjct: 4 QHSIFSFSMLFLSICYINTFAQSPTAAPAQAPAVVVAQPPVATPTQAAAPHGITNVTKIL 63
Query: 44 KKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKN 103
+KAG +T IRLL++TQ + + L +S++G+T FAP D AFS LK G LN+L+D K+
Sbjct: 64 EKAGHFTIFIRLLRSTQEENHLFSALNDSSSGVTIFAPTDGAFSELKSGTLNTLSDGDKS 123
Query: 104 ELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGS 163
EL++FH++PTF+S S F T+SNP+ T AG RL LNVTS N+VN+TTG+ N ++ G+
Sbjct: 124 ELVKFHVVPTFLSTSQFQTVSNPLGTWAGTG-SRLPLNVTSYPNSVNITTGLTNTSLSGT 182
Query: 164 VYSDNQLAVYQVDKVLLPRDFFVAKPPAPAP-APEKAKASKKKSADDTEGPAG--DDSAA 220
VY+DNQLA+Y+++KVLLP+D F K PAPAP AP K +K A + E P D S A
Sbjct: 183 VYTDNQLAIYKIEKVLLPKDIFAFKAPAPAPAAPAPEKPTKAVPAANAESPVDPVDISRA 242
Query: 221 VSVKQRLVWGPLAVAMVVVAA 241
V+ V G L + + A
Sbjct: 243 VTFMHNNVVGSLVIVAAAMFA 263
>gb|AAT37948.1| fasciclin-like AGP 5 [Populus alba x Populus tremula]
Length = 263
Score = 187 bits (475), Expect = 2e-46
Identities = 117/262 (44%), Positives = 161/262 (60%), Gaps = 28/262 (10%)
Query: 1 MKHQLFTLPLLALMFFFHSTTTLA---ASSPA--------PAPSSSPT---------DII 40
MK QL + + L+F H T A A++PA P P+++PT ++
Sbjct: 1 MKQQLISSFSIFLLFL-HCANTFAQIPAAAPAQAPAVVVAPPPAATPTQAAAPHGITNVT 59
Query: 41 RILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQ 100
+IL+KAG +T IRLL +TQ + + L +S+ GLT FAP D+AFS LK G LN+L D
Sbjct: 60 KILEKAGHFTIFIRLLGSTQEEGHLFSALNDSSTGLTIFAPTDSAFSELKSGTLNTLRDG 119
Query: 101 QKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTV 160
K+EL++FH++PTF+S S F T+SNP+ T AG RL LNVTS N+VN+TTG+ N ++
Sbjct: 120 DKSELVKFHVVPTFLSTSQFQTVSNPLGTWAGTG-SRLPLNVTSYPNSVNITTGLTNTSL 178
Query: 161 GGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAP-APEKAKASKKKSADDTEGPAGD--- 216
G+VY+DNQLA+Y+++KVLLP+D F + PAPAP AP K +K A E PA
Sbjct: 179 SGTVYTDNQLAIYKIEKVLLPKDIFASNAPAPAPVAPAPEKPTKAVPAVTVESPAASVDI 238
Query: 217 DSAAVSVKQRLV--WGPLAVAM 236
SA + LV +G LA AM
Sbjct: 239 SSALIFTNNILVGSFGLLASAM 260
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.130 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 405,844,602
Number of Sequences: 2540612
Number of extensions: 17135718
Number of successful extensions: 107143
Number of sequences better than 10.0: 243
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 106682
Number of HSP's gapped (non-prelim): 373
length of query: 245
length of database: 863,360,394
effective HSP length: 125
effective length of query: 120
effective length of database: 545,783,894
effective search space: 65494067280
effective search space used: 65494067280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0136.12