BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0135.9
(645 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175433.1| AAA-type ATPase family protein [Arabidopsis tha... 888 0.0
gb|AAF76434.1| Contains similarity to p60 katanin from Chlamydom... 845 0.0
ref|XP_467801.1| transitional endoplasmic reticulum ATPase-like ... 710 0.0
ref|NP_188608.1| AAA-type ATPase family protein [Arabidopsis tha... 675 0.0
gb|AAM13995.1| unknown protein [Arabidopsis thaliana] 477 e-133
ref|NP_567238.2| AAA-type ATPase family protein [Arabidopsis tha... 477 e-133
ref|NP_171788.2| AAA-type ATPase family protein [Arabidopsis tha... 471 e-131
dbj|BAD37292.1| spastin-like [Oryza sativa (japonica cultivar-gr... 467 e-130
dbj|BAB02560.1| unnamed protein product [Arabidopsis thaliana] g... 460 e-128
ref|XP_479469.1| putative MSP1(mitochondrial sorting of proteins... 433 e-120
ref|NP_194217.2| AAA-type ATPase family protein [Arabidopsis tha... 407 e-112
gb|AAC19276.1| T14P8.7 [Arabidopsis thaliana] gi|7269007|emb|CAB... 407 e-112
emb|CAB79395.1| putative protein [Arabidopsis thaliana] gi|46782... 397 e-109
gb|AAP21168.1| At1g64110/F22C12_22 [Arabidopsis thaliana] gi|184... 396 e-108
ref|NP_849842.1| AAA-type ATPase family protein [Arabidopsis tha... 396 e-108
emb|CAB79602.1| putative protein [Arabidopsis thaliana] gi|44553... 395 e-108
gb|AAF02877.1| Unknown protein [Arabidopsis thaliana] gi|2551840... 394 e-108
ref|NP_176404.2| AAA-type ATPase family protein [Arabidopsis tha... 375 e-102
dbj|BAD81550.1| unknown protein [Oryza sativa (japonica cultivar... 364 4e-99
ref|XP_651910.1| AAA family ATPase, putative [Entamoeba histolyt... 355 2e-96
>ref|NP_175433.1| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 640
Score = 888 bits (2295), Expect = 0.0
Identities = 441/615 (71%), Positives = 527/615 (84%), Gaps = 2/615 (0%)
Query: 28 RPLANGQRGEVYEVNGDRVAVILDISEDRENEVELESVNNDGRKPPVYWINVKNIEHDLD 87
RPL++GQRGEVYEV G+RVAVI + +D+ +E + + P++W++VK++++DLD
Sbjct: 26 RPLSSGQRGEVYEVIGNRVAVIFEYGDDKTSEGSEKKPAEQPQMLPIHWLDVKDLKYDLD 85
Query: 88 AQSQDCYLAMEALREVLNSKQPLIVYFPDGSQWLHKSVPKSIRSEFFHKVEEMFDQLSGP 147
Q+ D Y+AMEAL EVL S QPLIVYFPD +QWL ++VPK+ R EF KV+EMFD+LSGP
Sbjct: 86 MQAVDGYIAMEALNEVLQSIQPLIVYFPDSTQWLSRAVPKTRRKEFVDKVKEMFDKLSGP 145
Query: 148 IVLICGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTD--KGQKTSDDDEINKLFS 205
IV+ICGQNK ++G+KE+ +FTM+LPN +R+ KLPL LK LT+ G+ S+++EI KLF+
Sbjct: 146 IVMICGQNKIETGSKEREKFTMVLPNLSRVVKLPLPLKGLTEGFTGRGKSEENEIYKLFT 205
Query: 206 NVVSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVI 265
NV+ + PPK+E+ L FKKQL EDR+IVISRSN+NEL K LEEH+L C DL +++D VI
Sbjct: 206 NVMRLHPPKEEDTLRLFKKQLGEDRRIVISRSNINELLKALEEHELLCTDLYQVNTDGVI 265
Query: 266 LTKQKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLK 325
LTKQKAEK +GWAKNHYL+SC +P VKG +L LPRESLEI+I+RL+ +E S +PSQ+LK
Sbjct: 266 LTKQKAEKAIGWAKNHYLASCPVPLVKGGRLSLPRESLEISIARLRKLEDNSLKPSQNLK 325
Query: 326 NLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRP 385
N+AKDE+E NF+SAVV PGEIGVKF+DIGALEDVKKALNELVILPMRRPELF GNLLRP
Sbjct: 326 NIAKDEYERNFVSAVVAPGEIGVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRP 385
Query: 386 VKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLA 445
KGILLFGPPGTGKTL+AKALATEAGANFIS++GSTLTSKWFGDAEKLTKALFSFA+KLA
Sbjct: 386 CKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLA 445
Query: 446 PVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLD 505
PVIIFVDE+DSLLGARGG+ EHEATRRMRNEFMAAWDGLRSK++QRILILGATNRPFDLD
Sbjct: 446 PVIIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLD 505
Query: 506 DAVIRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCI 565
DAVIRRLPRRIYVDLPDA+NR KIL+I L ENL+ DFQF+KLA T+GYSGSDLKNLCI
Sbjct: 506 DAVIRRLPRRIYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCI 565
Query: 566 TAAYRPVQELLEEEKAGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNE 625
AAYRPVQELL+EE+ G + LR L+LDDF+QSK+KV PSVAYDA ++NELRKWNE
Sbjct: 566 AAAYRPVQELLQEEQKGARAEASPGLRSLSLDDFIQSKAKVSPSVAYDATTMNELRKWNE 625
Query: 626 MYGEGGTRTKSPFGF 640
YGEGG+RTKSPFGF
Sbjct: 626 QYGEGGSRTKSPFGF 640
>gb|AAF76434.1| Contains similarity to p60 katanin from Chlamydomonas reinhardtii
gb|AF205377 and contains an AAA domain PF|00004.
[Arabidopsis thaliana] gi|25405352|pir||G96537
hypothetical protein F2J10.1 [imported] - Arabidopsis
thaliana
Length = 627
Score = 845 bits (2182), Expect = 0.0
Identities = 426/615 (69%), Positives = 512/615 (82%), Gaps = 15/615 (2%)
Query: 28 RPLANGQRGEVYEVNGDRVAVILDISEDRENEVELESVNNDGRKPPVYWINVKNIEHDLD 87
RPL++GQRGEVYEV G+RVAVI + +D+ +E + + P++W++VK++++DLD
Sbjct: 26 RPLSSGQRGEVYEVIGNRVAVIFEYGDDKTSEGSEKKPAEQPQMLPIHWLDVKDLKYDLD 85
Query: 88 AQSQDCYLAMEALREVLNSKQPLIVYFPDGSQWLHKSVPKSIRSEFFHKVEEMFDQLSGP 147
Q+ D Y+AMEAL EVL S QPLIVYFPD +QWL ++VPK+ R EF KV+EMFD+LSGP
Sbjct: 86 MQAVDGYIAMEALNEVLQSIQPLIVYFPDSTQWLSRAVPKTRRKEFVDKVKEMFDKLSGP 145
Query: 148 IVLICGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTD--KGQKTSDDDEINKLFS 205
IV+ICGQNK ++G+KE+ +FTM+LPN +R+ KLPL LK LT+ G+ S+++EI KLF+
Sbjct: 146 IVMICGQNKIETGSKEREKFTMVLPNLSRVVKLPLPLKGLTEGFTGRGKSEENEIYKLFT 205
Query: 206 NVVSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVI 265
NV+ + PPK+E+ L FKKQL EDR+IVISRSN+NEL K + ++ V
Sbjct: 206 NVMRLHPPKEEDTLRLFKKQLGEDRRIVISRSNINELLKKRPQKLVAFVFA--------- 256
Query: 266 LTKQKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLK 325
+AEK +GWAKNHYL+SC +P VKG +L LPRESLEI+I+RL+ +E S +PSQ+LK
Sbjct: 257 ----EAEKAIGWAKNHYLASCPVPLVKGGRLSLPRESLEISIARLRKLEDNSLKPSQNLK 312
Query: 326 NLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRP 385
N+AKDE+E NF+SAVV PGEIGVKF+DIGALEDVKKALNELVILPMRRPELF GNLLRP
Sbjct: 313 NIAKDEYERNFVSAVVAPGEIGVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRP 372
Query: 386 VKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLA 445
KGILLFGPPGTGKTL+AKALATEAGANFIS++GSTLTSKWFGDAEKLTKALFSFA+KLA
Sbjct: 373 CKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLA 432
Query: 446 PVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLD 505
PVIIFVDE+DSLLGARGG+ EHEATRRMRNEFMAAWDGLRSK++QRILILGATNRPFDLD
Sbjct: 433 PVIIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLD 492
Query: 506 DAVIRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCI 565
DAVIRRLPRRIYVDLPDA+NR KIL+I L ENL+ DFQF+KLA T+GYSGSDLKNLCI
Sbjct: 493 DAVIRRLPRRIYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCI 552
Query: 566 TAAYRPVQELLEEEKAGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNE 625
AAYRPVQELL+EE+ G + LR L+LDDF+QSK+KV PSVAYDA ++NELRKWNE
Sbjct: 553 AAAYRPVQELLQEEQKGARAEASPGLRSLSLDDFIQSKAKVSPSVAYDATTMNELRKWNE 612
Query: 626 MYGEGGTRTKSPFGF 640
YGEGG+RTKSPFGF
Sbjct: 613 QYGEGGSRTKSPFGF 627
>ref|XP_467801.1| transitional endoplasmic reticulum ATPase-like [Oryza sativa
(japonica cultivar-group)] gi|46390947|dbj|BAD16461.1|
transitional endoplasmic reticulum ATPase-like [Oryza
sativa (japonica cultivar-group)]
Length = 473
Score = 710 bits (1832), Expect = 0.0
Identities = 352/469 (75%), Positives = 406/469 (86%)
Query: 173 NFARLAKLPLSLKRLTDKGQKTSDDDEINKLFSNVVSIQPPKDENLLATFKKQLEEDRKI 232
N +RL+ LP SLKRL K S I+KLF+N + + P+++ F Q+EEDRKI
Sbjct: 4 NLSRLSSLPSSLKRLVGGRPKYSRSSGISKLFTNSLIVPLPEEDEQRRIFNNQIEEDRKI 63
Query: 233 VISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILTKQKAEKVVGWAKNHYLSSCLLPCVK 292
+ISR NL EL KVL+EH+LSCV+LLH+ SD V+LT+QKAEKVVGWA++HYLSS +LP +K
Sbjct: 64 IISRHNLVELHKVLQEHELSCVELLHVKSDGVVLTRQKAEKVVGWARSHYLSSAVLPNIK 123
Query: 293 GDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLAKDEFESNFISAVVPPGEIGVKFDD 352
GD+L +PRESL++AI RLK +++PSQ++KNLAKDE+E NFISAVVPP EIGVKFDD
Sbjct: 124 GDRLIIPRESLDVAIERLKEQGIKTKRPSQNIKNLAKDEYERNFISAVVPPDEIGVKFDD 183
Query: 353 IGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEAGA 412
IGALEDVK+ L+ELV LPMRRPELF+HGNLLRP KG+LLFGPPGTGKTL+AKALATEAGA
Sbjct: 184 IGALEDVKRTLDELVTLPMRRPELFSHGNLLRPCKGVLLFGPPGTGKTLLAKALATEAGA 243
Query: 413 NFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRR 472
NFIS++GSTLTSKWFGDAEKLTKALFSFAS+LAPVIIFVDEVDSLLGARGGAFEHEATRR
Sbjct: 244 NFISITGSTLTSKWFGDAEKLTKALFSFASRLAPVIIFVDEVDSLLGARGGAFEHEATRR 303
Query: 473 MRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILRI 532
MRNEFMAAWDGLRSKE+QRILILGATNRPFDLDDAVIRRLPRRIYVDLPDA NR KIL+I
Sbjct: 304 MRNEFMAAWDGLRSKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAQNRMKILKI 363
Query: 533 ILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEKAGDNNITNVALR 592
+L ENL+ DF+FD+LAN T+GYSGSDLKNLCI +AYRPV ELLEEEK G N LR
Sbjct: 364 LLAKENLESDFRFDELANSTEGYSGSDLKNLCIASAYRPVHELLEEEKKGGPCSQNTGLR 423
Query: 593 PLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPFGFG 641
PL LDDF+Q+K+KV PSV+YDA S+NELRKWNE YGEGG+RT+SPFGFG
Sbjct: 424 PLRLDDFIQAKAKVSPSVSYDATSMNELRKWNEQYGEGGSRTRSPFGFG 472
>ref|NP_188608.1| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 439
Score = 675 bits (1741), Expect = 0.0
Identities = 341/441 (77%), Positives = 387/441 (87%), Gaps = 10/441 (2%)
Query: 208 VSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILT 267
+++ PPK+E L F KQL EDR+IV+SRSNLNEL K LEE++L C DL +++D VILT
Sbjct: 1 MNLVPPKEEENLIVFNKQLGEDRRIVMSRSNLNELLKALEENELLCTDLYQVNTDGVILT 60
Query: 268 KQKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLK-- 325
KQ+AEKV+GWA+NHYLSSC P +K +L LPRES+EI++ RLK E +SR+P+Q+LK
Sbjct: 61 KQRAEKVIGWARNHYLSSCPSPSIKEGRLILPRESIEISVKRLKAQEDISRKPTQNLKRF 120
Query: 326 ----NLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGN 381
N+AKDEFE+NF+SAVV PGEIGVKFDDIGALE VKK LNELVILPMRRPELFT GN
Sbjct: 121 LFLQNIAKDEFETNFVSAVVAPGEIGVKFDDIGALEHVKKTLNELVILPMRRPELFTRGN 180
Query: 382 LLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFA 441
LLRP KGILLFGPPGTGKTL+AKALATEAGANFIS++GSTLTSKWFGDAEKLTKALFSFA
Sbjct: 181 LLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFA 240
Query: 442 SKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRP 501
SKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSK++QRILILGATNRP
Sbjct: 241 SKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRP 300
Query: 502 FDLDDAVIRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLK 561
FDLDDAVIRRLPRRIYVDLPDA+NR KIL+I L ENL+ F+FDKLA T+GYSGSDLK
Sbjct: 301 FDLDDAVIRRLPRRIYVDLPDAENRLKILKIFLTPENLETGFEFDKLAKETEGYSGSDLK 360
Query: 562 NLCITAAYRPVQELLEEEKAGDNNITNVA--LRPLNLDDFVQSKSKVGPSVAYDAVSVNE 619
NLCI AAYRPVQELL+EE +++TN + LRPL+LDDF+QSK+KV PSVAYDA ++NE
Sbjct: 361 NLCIAAAYRPVQELLQEE--NKDSVTNASPDLRPLSLDDFIQSKAKVSPSVAYDATTMNE 418
Query: 620 LRKWNEMYGEGGTRTKSPFGF 640
LRKWNE YGEGGTRTKSPFGF
Sbjct: 419 LRKWNEQYGEGGTRTKSPFGF 439
>gb|AAM13995.1| unknown protein [Arabidopsis thaliana]
Length = 1265
Score = 477 bits (1228), Expect = e-133
Identities = 256/540 (47%), Positives = 363/540 (66%), Gaps = 23/540 (4%)
Query: 123 KSVPKSI--RSEFFHKVEEMFDQLSGPIVLICGQNKAQSGTKEKGQ-----FTMILPNFA 175
K + KS+ S+ + ++ + L IV+I Q + S KEK FT N
Sbjct: 725 KDIEKSLVGNSDVYATLKSKLETLPENIVVIASQTQLDS-RKEKSHPGGFLFTKFGGNQT 783
Query: 176 RLAKL--PLSLKRLTDKGQKTSDD-DEINKLFSNVVSIQPPKDENLLATFKKQLEEDRKI 232
L L P + +L D+ ++T +I +LF N ++IQ P++E LL+ +K++L+ D +I
Sbjct: 784 ALLDLAFPDNFGKLHDRSKETPKSMKQITRLFPNKIAIQLPQEEALLSDWKEKLDRDTEI 843
Query: 233 VISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILTKQKAEKVVGWAKNHYLSSCLLPCVK 292
+ ++N+ + VL +++L C DL L D L + EKVVGWA H+L C P VK
Sbjct: 844 LKVQANITSILAVLAKNKLDCPDLGTLCIKDQTLPSESVEKVVGWAFGHHLMICTEPIVK 903
Query: 293 GDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLA-KDEFESNFISAVVPPGEIGVKFD 351
+KL + ES+ + L ++ ++ +SLK++ ++EFE +S V+PP +IGV FD
Sbjct: 904 DNKLVISAESISYGLQTLHDIQNENKSLKKSLKDVVTENEFEKKLLSDVIPPSDIGVSFD 963
Query: 352 DIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEAG 411
DIGALE+VK+ L ELV+LP++RPELF G L +P KGILLFGPPGTGKT++AKA+ATEAG
Sbjct: 964 DIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAG 1023
Query: 412 ANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATR 471
ANFI++S S++TSKWFG+ EK KA+FS ASK+AP +IFVDEVDS+LG R EHEA R
Sbjct: 1024 ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMR 1083
Query: 472 RMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILR 531
+M+NEFM WDGLR+K+ +R+L+L ATNRPFDLD+AVIRRLPRR+ V+LPDA NR KIL
Sbjct: 1084 KMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDATNRSKILS 1143
Query: 532 IILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEK------AGDNN 585
+IL E + PD + +AN+TDGYSGSDLKNLC+TAA+ P++E+LE+EK +N
Sbjct: 1144 VILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFPIREILEKEKKEKTAAQAENR 1203
Query: 586 ITN-----VALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPFGF 640
T +R L ++DF + +V SV+ D+ ++NEL++WNE+YGEGG+R K+ +
Sbjct: 1204 PTPPLYSCTDVRSLTMNDFKAAHDQVCASVSSDSSNMNELQQWNELYGEGGSRKKTSLSY 1263
>ref|NP_567238.2| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 1265
Score = 477 bits (1228), Expect = e-133
Identities = 256/540 (47%), Positives = 363/540 (66%), Gaps = 23/540 (4%)
Query: 123 KSVPKSI--RSEFFHKVEEMFDQLSGPIVLICGQNKAQSGTKEKGQ-----FTMILPNFA 175
K + KS+ S+ + ++ + L IV+I Q + S KEK FT N
Sbjct: 725 KDIEKSLVGNSDVYATLKSKLETLPENIVVIASQTQLDS-RKEKSHPGGFLFTKFGGNQT 783
Query: 176 RLAKL--PLSLKRLTDKGQKTSDD-DEINKLFSNVVSIQPPKDENLLATFKKQLEEDRKI 232
L L P + +L D+ ++T +I +LF N ++IQ P++E LL+ +K++L+ D +I
Sbjct: 784 ALLDLAFPDNFGKLHDRSKETPKSMKQITRLFPNKIAIQLPQEEALLSDWKEKLDRDTEI 843
Query: 233 VISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILTKQKAEKVVGWAKNHYLSSCLLPCVK 292
+ ++N+ + VL +++L C DL L D L + EKVVGWA H+L C P VK
Sbjct: 844 LKVQANITSILAVLAKNKLDCPDLGTLCIKDQTLPSESVEKVVGWAFGHHLMICTEPIVK 903
Query: 293 GDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLA-KDEFESNFISAVVPPGEIGVKFD 351
+KL + ES+ + L ++ ++ +SLK++ ++EFE +S V+PP +IGV FD
Sbjct: 904 DNKLVISAESISYGLQTLHDIQNENKSLKKSLKDVVTENEFEKKLLSDVIPPSDIGVSFD 963
Query: 352 DIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEAG 411
DIGALE+VK+ L ELV+LP++RPELF G L +P KGILLFGPPGTGKT++AKA+ATEAG
Sbjct: 964 DIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAG 1023
Query: 412 ANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATR 471
ANFI++S S++TSKWFG+ EK KA+FS ASK+AP +IFVDEVDS+LG R EHEA R
Sbjct: 1024 ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMR 1083
Query: 472 RMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILR 531
+M+NEFM WDGLR+K+ +R+L+L ATNRPFDLD+AVIRRLPRR+ V+LPDA NR KIL
Sbjct: 1084 KMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDATNRSKILS 1143
Query: 532 IILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEK------AGDNN 585
+IL E + PD + +AN+TDGYSGSDLKNLC+TAA+ P++E+LE+EK +N
Sbjct: 1144 VILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFPIREILEKEKKEKTAAQAENR 1203
Query: 586 ITN-----VALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPFGF 640
T +R L ++DF + +V SV+ D+ ++NEL++WNE+YGEGG+R K+ +
Sbjct: 1204 PTPPLYSCTDVRSLTMNDFKAAHDQVCASVSSDSSNMNELQQWNELYGEGGSRKKTSLSY 1263
>ref|NP_171788.2| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 1252
Score = 471 bits (1212), Expect = e-131
Identities = 255/541 (47%), Positives = 360/541 (66%), Gaps = 24/541 (4%)
Query: 123 KSVPKSI--RSEFFHKVEEMFDQLSGPIVLICGQNKAQSGTKEK---GQFTMILPNFARL 177
K + KS+ ++ + ++ + L IV+I Q + + KEK G F +
Sbjct: 711 KDIEKSVSGNTDVYITLKSKLENLPENIVVIASQTQLDN-RKEKSHPGGFLFTKFGSNQT 769
Query: 178 AKLPLSLK-----RLTDKGQKTSDD-DEINKLFSNVVSIQPPKDENLLATFKKQLEEDRK 231
A L L+ RL D+ + +I +LF N V+IQ P+DE L +K +LE D +
Sbjct: 770 ALLDLAFPDTFGGRLQDRNTEMPKAVKQITRLFPNKVTIQLPEDEASLVDWKDKLERDTE 829
Query: 232 IVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILTKQKAEKVVGWAKNHYLSSCLLPCV 291
I+ +++N+ +R VL ++QL C D+ L D L EKVVG+A NH+L +C P V
Sbjct: 830 ILKAQANITSIRAVLSKNQLVCPDIEILCIKDQTLPSDSVEKVVGFAFNHHLMNCSEPTV 889
Query: 292 KGDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLA-KDEFESNFISAVVPPGEIGVKF 350
K +KL + ES+ + L ++ ++ +SLK++ ++EFE +S V+PP +IGV F
Sbjct: 890 KDNKLIISAESITYGLQLLHEIQNENKSTKKSLKDVVTENEFEKKLLSDVIPPSDIGVSF 949
Query: 351 DDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEA 410
DIGALE+VK L ELV+LP++RPELF G L +P KGILLFGPPGTGKT++AKA+ATEA
Sbjct: 950 SDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEA 1009
Query: 411 GANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEAT 470
GANFI++S S++TSKWFG+ EK KA+FS ASK+AP +IFVDEVDS+LG R EHEA
Sbjct: 1010 GANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAM 1069
Query: 471 RRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKIL 530
R+M+NEFM WDGLR+K+ +R+L+L ATNRPFDLD+AVIRRLPRR+ V+LPD+ NR KIL
Sbjct: 1070 RKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDSANRSKIL 1129
Query: 531 RIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEK---------- 580
+IL E + D + +AN+TDGYSGSDLKNLC+TAA+ P++E+LE+EK
Sbjct: 1130 SVILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIREILEKEKKERSVAQAEN 1189
Query: 581 -AGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPFG 639
A ++ +RPLN++DF + +V SVA D+ ++NEL++WNE+YGEGG+R K+
Sbjct: 1190 RAMPQLYSSTDVRPLNMNDFKTAHDQVCASVASDSSNMNELQQWNELYGEGGSRKKTSLS 1249
Query: 640 F 640
+
Sbjct: 1250 Y 1250
>dbj|BAD37292.1| spastin-like [Oryza sativa (japonica cultivar-group)]
Length = 271
Score = 467 bits (1201), Expect = e-130
Identities = 230/271 (84%), Positives = 252/271 (92%), Gaps = 1/271 (0%)
Query: 371 MRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDA 430
MRRPELF+HGNLLRP KGILLFGPPGTGKTL+AKALATEAGANFIS++GS LTSKWFGDA
Sbjct: 1 MRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSNLTSKWFGDA 60
Query: 431 EKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQ 490
EKLTKALFSFAS+LAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQ
Sbjct: 61 EKLTKALFSFASRLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQ 120
Query: 491 RILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLAN 550
RILILGATNRPFDLDDAVIRRLPRRIYVDLPD+ NR KIL+I+L ENL+ DF+FD+LAN
Sbjct: 121 RILILGATNRPFDLDDAVIRRLPRRIYVDLPDSQNRMKILKILLAKENLESDFRFDELAN 180
Query: 551 LTDGYSGSDLKNLCITAAYRPVQELLEEEKAGDNNITNVALRPLNLDDFVQSKSKVGPSV 610
T+GYSGSDLKNLCI AAYRPV ELLEEEK G + T ++LRPL L+DFVQ+K+KV PSV
Sbjct: 181 ATEGYSGSDLKNLCIAAAYRPVHELLEEEKGGVSG-TKISLRPLKLEDFVQAKAKVSPSV 239
Query: 611 AYDAVSVNELRKWNEMYGEGGTRTKSPFGFG 641
A+DA S+NELRKWNE YGEGG+R+KSPFGFG
Sbjct: 240 AFDATSMNELRKWNEQYGEGGSRSKSPFGFG 270
>dbj|BAB02560.1| unnamed protein product [Arabidopsis thaliana]
gi|25454662|pir||T52403 hypothetical protein MMB12.22
[imported] - Arabidopsis thaliana
Length = 270
Score = 460 bits (1184), Expect = e-128
Identities = 231/272 (84%), Positives = 251/272 (91%), Gaps = 4/272 (1%)
Query: 371 MRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDA 430
MRRPELFT GNLLRP KGILLFGPPGTGKTL+AKALATEAGANFIS++GSTLTSKWFGDA
Sbjct: 1 MRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDA 60
Query: 431 EKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQ 490
EKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSK++Q
Sbjct: 61 EKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKDSQ 120
Query: 491 RILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLAN 550
RILILGATNRPFDLDDAVIRRLPRRIYVDLPDA+NR KIL+I L ENL+ F+FDKLA
Sbjct: 121 RILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILKIFLTPENLETGFEFDKLAK 180
Query: 551 LTDGYSGSDLKNLCITAAYRPVQELLEEEKAGDNNITNVA--LRPLNLDDFVQSKSKVGP 608
T+GYSGSDLKNLCI AAYRPVQELL+EE +++TN + LRPL+LDDF+QSK+KV P
Sbjct: 181 ETEGYSGSDLKNLCIAAAYRPVQELLQEE--NKDSVTNASPDLRPLSLDDFIQSKAKVSP 238
Query: 609 SVAYDAVSVNELRKWNEMYGEGGTRTKSPFGF 640
SVAYDA ++NELRKWNE YGEGGTRTKSPFGF
Sbjct: 239 SVAYDATTMNELRKWNEQYGEGGTRTKSPFGF 270
>ref|XP_479469.1| putative MSP1(mitochondrial sorting of proteins) protein [Oryza
sativa (japonica cultivar-group)]
gi|33146850|dbj|BAC79845.1| putative MSP1(mitochondrial
sorting of proteins) protein [Oryza sativa (japonica
cultivar-group)]
Length = 1081
Score = 433 bits (1113), Expect = e-120
Identities = 229/475 (48%), Positives = 329/475 (69%), Gaps = 17/475 (3%)
Query: 183 SLKRLTDKGQKTSD-DDEINKLFSNVVSIQPPKDENLLATFKKQLEEDRKIVISRSNLNE 241
S R+ DK ++ + KLF N V+IQ P+DE L+ +K+ L+ D +I+ +++N ++
Sbjct: 605 SFGRVNDKNKEALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEILKAKANTSK 664
Query: 242 LRKVLEEHQLSCVDL-LHLDSDDVILTKQKAEKVVGWAKNHYLSSCLLPCVKGDKL-CLP 299
++ L + L C D+ D ILT + +KVVG+A +H +P + D L L
Sbjct: 665 IQSFLTRNGLECADIETSACVKDRILTNECVDKVVGYALSHQFKHSTIPTRENDGLLALS 724
Query: 300 RESLEIAISRLKGVETMSRQPS--QSLKNLA-KDEFESNFISAVVPPGEIGVKFDDIGAL 356
ESL+ + L +++ ++ S +SLK++ ++EFE + V+PP EIGV F+DIGAL
Sbjct: 725 GESLKHGVELLDSMQSDPKKKSTKKSLKDVTTENEFEKRLLGDVIPPDEIGVTFEDIGAL 784
Query: 357 EDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEAGANFIS 416
E+VK+ L ELV+LP++RPELF+ G L++P KGILLFGPPGTGKT++AKA+ATEAGANFI+
Sbjct: 785 ENVKETLKELVMLPLQRPELFSKGQLMKPCKGILLFGPPGTGKTMLAKAVATEAGANFIN 844
Query: 417 VSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNE 476
+S S++ SKWFG+ EK KA+FS ASK+AP +IFVDEVD +LG R EHEA R+M+NE
Sbjct: 845 ISMSSIASKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDGMLGRRENPGEHEAMRKMKNE 904
Query: 477 FMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILRIILKH 536
FM WDGLR+K+ +R+L+L ATNRPFDLD+AV+RRLPRR+ V+LPDA NRKKIL +IL
Sbjct: 905 FMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDASNRKKILSVILAK 964
Query: 537 ENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEK------AGDNN----- 585
E+L D + LANLTDGYSGSD+KNLC+TAA+ P++E+LE EK +N
Sbjct: 965 EDLADDVDLEALANLTDGYSGSDMKNLCVTAAHCPIREILEREKKERASAEAENKPLPPP 1024
Query: 586 ITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPFGF 640
++ +R L ++DF + +V S+ D+ ++ EL +WN++YGEGG+R K+ +
Sbjct: 1025 RSSSDVRSLRMNDFKHAHEQVCASITSDSRNMTELIQWNDLYGEGGSRKKTSLSY 1079
>ref|NP_194217.2| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 1122
Score = 407 bits (1047), Expect = e-112
Identities = 214/454 (47%), Positives = 300/454 (65%), Gaps = 19/454 (4%)
Query: 202 KLFSNVVSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDL----L 257
+LF N ++IQ P+DE L +K Q++ D + +SN N LR VL L C L
Sbjct: 671 ELFENKITIQMPQDEKRLTLWKHQMDRDAETSKVKSNFNHLRMVLRRRGLGCEGLETTWS 730
Query: 258 HLDSDDVILTKQKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMS 317
+ D+ L + EK++GWA +++S P K+ L RES+E I L+ +
Sbjct: 731 RMCLKDLTLQRDSVEKIIGWAFGNHISKN--PDTDPAKVTLSRESIEFGIGLLQN--DLK 786
Query: 318 RQPSQSLKNLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELF 377
S + ++ FE +S V+ P +I V FDDIGALE VK L ELV+LP++RPELF
Sbjct: 787 GSTSSKKDIVVENVFEKRLLSDVILPSDIDVTFDDIGALEKVKDILKELVMLPLQRPELF 846
Query: 378 THGNLLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKAL 437
G L +P KGILLFGPPGTGKT++AKA+A EA ANFI++S S++TSKWFG+ EK KA+
Sbjct: 847 CKGELTKPCKGILLFGPPGTGKTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAV 906
Query: 438 FSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGA 497
FS ASK++P +IFVDEVDS+LG R EHEA+R+++NEFM WDGL ++E +R+L+L A
Sbjct: 907 FSLASKMSPSVIFVDEVDSMLGRREHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAA 966
Query: 498 TNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSG 557
TNRPFDLD+AVIRRLPRR+ V LPD NR IL++IL E+L PD ++A++T+GYSG
Sbjct: 967 TNRPFDLDEAVIRRLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSG 1026
Query: 558 SDLKNLCITAAYRPVQELLEEEKAGDNNIT-----------NVALRPLNLDDFVQSKSKV 606
SDLKNLC+TAA+RP++E+LE+EK + + LR LN++DF + V
Sbjct: 1027 SDLKNLCVTAAHRPIKEILEKEKRERDAALAQGKVPPPLSGSSDLRALNVEDFRDAHKWV 1086
Query: 607 GPSVAYDAVSVNELRKWNEMYGEGGTRTKSPFGF 640
SV+ ++ ++ L++WN+++GEGG+ + F F
Sbjct: 1087 SASVSSESATMTALQQWNKLHGEGGSGKQQSFSF 1120
>gb|AAC19276.1| T14P8.7 [Arabidopsis thaliana] gi|7269007|emb|CAB80740.1| AT4g02470
[Arabidopsis thaliana] gi|7487016|pir||T01303
hypothetical protein T14P8.7 - Arabidopsis thaliana
Length = 371
Score = 407 bits (1045), Expect = e-112
Identities = 201/367 (54%), Positives = 272/367 (73%), Gaps = 12/367 (3%)
Query: 286 CLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLA-KDEFESNFISAVVPPG 344
C P VK +KL + ES+ + L ++ ++ +SLK++ ++EFE +S V+PP
Sbjct: 3 CTEPIVKDNKLVISAESISYGLQTLHDIQNENKSLKKSLKDVVTENEFEKKLLSDVIPPS 62
Query: 345 EIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAK 404
+IGV FDDIGALE+VK+ L ELV+LP++RPELF G L +P KGILLFGPPGTGKT++AK
Sbjct: 63 DIGVSFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAK 122
Query: 405 ALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGA 464
A+ATEAGANFI++S S++TSKWFG+ EK KA+FS ASK+AP +IFVDEVDS+LG R
Sbjct: 123 AVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENP 182
Query: 465 FEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAD 524
EHEA R+M+NEFM WDGLR+K+ +R+L+L ATNRPFDLD+AVIRRLPRR+ V+LPDA
Sbjct: 183 GEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAT 242
Query: 525 NRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEK---- 580
NR KIL +IL E + PD + +AN+TDGYSGSDLKNLC+TAA+ P++E+LE+EK
Sbjct: 243 NRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFPIREILEKEKKEKT 302
Query: 581 --AGDNNITN-----VALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTR 633
+N T +R L ++DF + +V SV+ D+ ++NEL++WNE+YGEGG+R
Sbjct: 303 AAQAENRPTPPLYSCTDVRSLTMNDFKAAHDQVCASVSSDSSNMNELQQWNELYGEGGSR 362
Query: 634 TKSPFGF 640
K+ +
Sbjct: 363 KKTSLSY 369
>emb|CAB79395.1| putative protein [Arabidopsis thaliana] gi|4678264|emb|CAB41125.1|
putative protein [Arabidopsis thaliana]
gi|23296350|gb|AAN13049.1| unknown protein [Arabidopsis
thaliana] gi|7486530|pir||T06669 hypothetical protein
F6I7.60 - Arabidopsis thaliana
Length = 442
Score = 397 bits (1021), Expect = e-109
Identities = 209/443 (47%), Positives = 292/443 (65%), Gaps = 19/443 (4%)
Query: 213 PKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDL----LHLDSDDVILTK 268
P+DE L +K Q++ D + +SN N LR VL L C L + D+ L +
Sbjct: 2 PQDEKRLTLWKHQMDRDAETSKVKSNFNHLRMVLRRRGLGCEGLETTWSRMCLKDLTLQR 61
Query: 269 QKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLA 328
EK++GWA +++S P K+ L RES+E I L+ + S +
Sbjct: 62 DSVEKIIGWAFGNHISKN--PDTDPAKVTLSRESIEFGIGLLQN--DLKGSTSSKKDIVV 117
Query: 329 KDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKG 388
++ FE +S V+ P +I V FDDIGALE VK L ELV+LP++RPELF G L +P KG
Sbjct: 118 ENVFEKRLLSDVILPSDIDVTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKG 177
Query: 389 ILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVI 448
ILLFGPPGTGKT++AKA+A EA ANFI++S S++TSKWFG+ EK KA+FS ASK++P +
Sbjct: 178 ILLFGPPGTGKTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSV 237
Query: 449 IFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAV 508
IFVDEVDS+LG R EHEA+R+++NEFM WDGL ++E +R+L+L ATNRPFDLD+AV
Sbjct: 238 IFVDEVDSMLGRREHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAV 297
Query: 509 IRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAA 568
IRRLPRR+ V LPD NR IL++IL E+L PD ++A++T+GYSGSDLKNLC+TAA
Sbjct: 298 IRRLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAA 357
Query: 569 YRPVQELLEEEKAGDNNIT-----------NVALRPLNLDDFVQSKSKVGPSVAYDAVSV 617
+RP++E+LE+EK + + LR LN++DF + V SV+ ++ ++
Sbjct: 358 HRPIKEILEKEKRERDAALAQGKVPPPLSGSSDLRALNVEDFRDAHKWVSASVSSESATM 417
Query: 618 NELRKWNEMYGEGGTRTKSPFGF 640
L++WN+++GEGG+ + F F
Sbjct: 418 TALQQWNKLHGEGGSGKQQSFSF 440
>gb|AAP21168.1| At1g64110/F22C12_22 [Arabidopsis thaliana]
gi|18407974|ref|NP_564824.1| AAA-type ATPase family
protein [Arabidopsis thaliana]
gi|15810167|gb|AAL06985.1| At1g64110/F22C12_22
[Arabidopsis thaliana]
Length = 824
Score = 396 bits (1017), Expect = e-108
Identities = 239/613 (38%), Positives = 352/613 (56%), Gaps = 104/613 (16%)
Query: 90 SQDCYLAMEALREVL---NSKQPLIVYFPDGSQWLHKSVPKSIRSEFFHKVEEMFDQLSG 146
S D L +++L +VL + P+++Y D +L +S ++ +++ +LSG
Sbjct: 242 SFDEKLLVQSLYKVLAYVSKANPIVLYLRDVENFLFRS------QRTYNLFQKLLQKLSG 295
Query: 147 PIVLICGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTDKGQKTSDDDEINKLFSN 206
P VLI G +++ + D++++ +F
Sbjct: 296 P-VLILGSRIVDLSSEDAQEI-----------------------------DEKLSAVFPY 325
Query: 207 VVSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVIL 266
+ I+PP+DE L ++K QLE D ++ ++ N N + +VL E+ L C DL + +D +
Sbjct: 326 NIDIRPPEDETHLVSWKSQLERDMNMIQTQDNRNHIMEVLSENDLICDDLESISFEDTKV 385
Query: 267 TKQKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAIS------------------ 308
E++V A +++L + P + KL + SL S
Sbjct: 386 LSNYIEEIVVSALSYHLMNNKDPEYRNGKLVISSISLSHGFSLFREGKAGGREKLKQKTK 445
Query: 309 ----------------RLKGVETMS--RQPSQSLK---------NLAKD-EFESNFISAV 340
+ + V T+S +P + K +A D EFE V
Sbjct: 446 EESSKEVKAESIKPETKTESVTTVSSKEEPEKEAKAEKVTPKAPEVAPDNEFEKRIRPEV 505
Query: 341 VPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKT 400
+P EI V F DIGAL+++K++L ELV+LP+RRP+LFT G LL+P +GILLFGPPGTGKT
Sbjct: 506 IPAEEINVTFKDIGALDEIKESLQELVMLPLRRPDLFT-GGLLKPCRGILLFGPPGTGKT 564
Query: 401 LMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGA 460
++AKA+A EAGA+FI+VS ST+TSKWFG+ EK +ALF+ ASK++P IIFVDEVDS+LG
Sbjct: 565 MLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQ 624
Query: 461 RGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDL 520
R EHEA R+++NEFM+ WDGL +K +RIL+L ATNRPFDLD+A+IRR RRI V L
Sbjct: 625 RTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGL 684
Query: 521 PDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEE- 579
P +NR+KILR +L E +D + + +LA +T+GY+GSDLKNLC TAAYRPV+EL+++E
Sbjct: 685 PAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPVRELIQQER 744
Query: 580 -------------KAGDNNITN----VALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRK 622
KAG+ + + LRPLN DF ++K++V S A + + EL++
Sbjct: 745 IKDTEKKKQREPTKAGEEDEGKEERVITLRPLNRQDFKEAKNQVAASFAAEGAGMGELKQ 804
Query: 623 WNEMYGEGGTRTK 635
WNE+YGEGG+R K
Sbjct: 805 WNELYGEGGSRKK 817
>ref|NP_849842.1| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 829
Score = 396 bits (1017), Expect = e-108
Identities = 239/613 (38%), Positives = 352/613 (56%), Gaps = 104/613 (16%)
Query: 90 SQDCYLAMEALREVL---NSKQPLIVYFPDGSQWLHKSVPKSIRSEFFHKVEEMFDQLSG 146
S D L +++L +VL + P+++Y D +L +S ++ +++ +LSG
Sbjct: 247 SFDEKLLVQSLYKVLAYVSKANPIVLYLRDVENFLFRS------QRTYNLFQKLLQKLSG 300
Query: 147 PIVLICGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTDKGQKTSDDDEINKLFSN 206
P VLI G +++ + D++++ +F
Sbjct: 301 P-VLILGSRIVDLSSEDAQEI-----------------------------DEKLSAVFPY 330
Query: 207 VVSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVIL 266
+ I+PP+DE L ++K QLE D ++ ++ N N + +VL E+ L C DL + +D +
Sbjct: 331 NIDIRPPEDETHLVSWKSQLERDMNMIQTQDNRNHIMEVLSENDLICDDLESISFEDTKV 390
Query: 267 TKQKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAIS------------------ 308
E++V A +++L + P + KL + SL S
Sbjct: 391 LSNYIEEIVVSALSYHLMNNKDPEYRNGKLVISSISLSHGFSLFREGKAGGREKLKQKTK 450
Query: 309 ----------------RLKGVETMS--RQPSQSLK---------NLAKD-EFESNFISAV 340
+ + V T+S +P + K +A D EFE V
Sbjct: 451 EESSKEVKAESIKPETKTESVTTVSSKEEPEKEAKAEKVTPKAPEVAPDNEFEKRIRPEV 510
Query: 341 VPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKT 400
+P EI V F DIGAL+++K++L ELV+LP+RRP+LFT G LL+P +GILLFGPPGTGKT
Sbjct: 511 IPAEEINVTFKDIGALDEIKESLQELVMLPLRRPDLFT-GGLLKPCRGILLFGPPGTGKT 569
Query: 401 LMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGA 460
++AKA+A EAGA+FI+VS ST+TSKWFG+ EK +ALF+ ASK++P IIFVDEVDS+LG
Sbjct: 570 MLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQ 629
Query: 461 RGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDL 520
R EHEA R+++NEFM+ WDGL +K +RIL+L ATNRPFDLD+A+IRR RRI V L
Sbjct: 630 RTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGL 689
Query: 521 PDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEE- 579
P +NR+KILR +L E +D + + +LA +T+GY+GSDLKNLC TAAYRPV+EL+++E
Sbjct: 690 PAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPVRELIQQER 749
Query: 580 -------------KAGDNNITN----VALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRK 622
KAG+ + + LRPLN DF ++K++V S A + + EL++
Sbjct: 750 IKDTEKKKQREPTKAGEEDEGKEERVITLRPLNRQDFKEAKNQVAASFAAEGAGMGELKQ 809
Query: 623 WNEMYGEGGTRTK 635
WNE+YGEGG+R K
Sbjct: 810 WNELYGEGGSRKK 822
>emb|CAB79602.1| putative protein [Arabidopsis thaliana] gi|4455359|emb|CAB36769.1|
putative protein [Arabidopsis thaliana]
gi|15234347|ref|NP_194529.1| AAA-type ATPase family
protein [Arabidopsis thaliana] gi|7487959|pir||T02901
MSP1 protein homolog T13J8.110 - Arabidopsis thaliana
Length = 726
Score = 395 bits (1016), Expect = e-108
Identities = 238/582 (40%), Positives = 343/582 (58%), Gaps = 80/582 (13%)
Query: 95 LAMEALREVLNS---KQPLIVYFPDGSQWLHKSVPKSIRSEFFHKV-EEMFDQLSGPIVL 150
L +++L +VL S P+I+Y D V K +SE F+K+ + + +LSGP+++
Sbjct: 187 LFLQSLYKVLVSISETNPIIIYLRD--------VEKLCQSERFYKLFQRLLTKLSGPVLV 238
Query: 151 ICGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTDKGQKTSDDDEINKLFSNVVSI 210
+ + L D Q+ + I+ LF + I
Sbjct: 239 LGSR-----------------------------LLEPEDDCQEVGEG--ISALFPYNIEI 267
Query: 211 QPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILTKQK 270
+PP+DEN L ++K + E+D K++ + N N + +VL + L C DL + D +
Sbjct: 268 RPPEDENQLMSWKTRFEDDMKVIQFQDNKNHIAEVLAANDLECDDLGSICHADTMFLSSH 327
Query: 271 AEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKG-----VETMSRQPSQSLK 325
E++V A +++L + P K +L + SL ++ L+ +++ + K
Sbjct: 328 IEEIVVSAISYHLMNNKEPEYKNGRLVISSNSLSHGLNILQEGQGCFEDSLKLDTNIDSK 387
Query: 326 NLAKD-EFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLR 384
+A D EFE V+P EIGV F DIG+L++ K++L ELV+LP+RRP+LF G LL+
Sbjct: 388 EVAPDNEFEKRIRPEVIPANEIGVTFADIGSLDETKESLQELVMLPLRRPDLFK-GGLLK 446
Query: 385 PVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKL 444
P +GILLFGPPGTGKT+MAKA+A EAGA+FI+VS ST+TSKWFG+ EK +ALF+ A+K+
Sbjct: 447 PCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKV 506
Query: 445 APVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDL 504
+P IIFVDEVDS+LG R EHEA R+++NEFM WDGL S RIL+L ATNRPFDL
Sbjct: 507 SPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRPFDL 566
Query: 505 DDAVIRRLPRRIYVDLPDADNRKKILRIIL---KHENLDPDFQFDKLANLTDGYSGSDLK 561
D+A+IRR RRI V LP ++R+KILR +L K ENLD F +LA +TDGYSGSDLK
Sbjct: 567 DEAIIRRFERRIMVGLPSVESREKILRTLLSKEKTENLD----FQELAQMTDGYSGSDLK 622
Query: 562 NLCITAAYRPVQELLEEEKAGD-----------------------NNITNVALRPLNLDD 598
N C TAAYRPV+EL+++E D + + LRPL+++D
Sbjct: 623 NFCTTAAYRPVRELIKQECLKDQERRKREEAEKNSEEGSEAKEEVSEERGITLRPLSMED 682
Query: 599 FVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPFGF 640
+KS+V S A + +NEL++WN++YGEGG+R K +
Sbjct: 683 MKVAKSQVAASFAAEGAGMNELKQWNDLYGEGGSRKKEQLSY 724
>gb|AAF02877.1| Unknown protein [Arabidopsis thaliana] gi|25518408|pir||C86159
hypothetical protein F22D16.11 - Arabidopsis thaliana
Length = 1217
Score = 394 bits (1012), Expect = e-108
Identities = 208/437 (47%), Positives = 287/437 (65%), Gaps = 45/437 (10%)
Query: 215 DENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILTKQKAEKV 274
DE L +K +LE D +I+ +++N+ +R A V
Sbjct: 813 DEASLVDWKDKLERDTEILKAQANITSIR---------------------------AHLV 845
Query: 275 VGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLAKDEFES 334
+ +NH ++ C + LC S E+ + +G + + ++EFE
Sbjct: 846 ICLIENHMINRC----GESGWLCFQSPSYELLRTYSQGQQAYHLGRKDVV---TENEFEK 898
Query: 335 NFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGP 394
+S V+PP +IGV F DIGALE+VK L ELV+LP++RPELF G L +P KGILLFGP
Sbjct: 899 KLLSDVIPPSDIGVSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGP 958
Query: 395 PGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEV 454
PGTGKT++AKA+ATEAGANFI++S S++TSKWFG+ EK KA+FS ASK+AP +IFVDEV
Sbjct: 959 PGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEV 1018
Query: 455 DSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPR 514
DS+LG R EHEA R+M+NEFM WDGLR+K+ +R+L+L ATNRPFDLD+AVIRRLPR
Sbjct: 1019 DSMLGRRENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPR 1078
Query: 515 RIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQE 574
R+ V+LPD+ NR KIL +IL E + D + +AN+TDGYSGSDLKNLC+TAA+ P++E
Sbjct: 1079 RLMVNLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIRE 1138
Query: 575 LLEEEK-----------AGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKW 623
+LE+EK A ++ +RPLN++DF + +V SVA D+ ++NEL++W
Sbjct: 1139 ILEKEKKERSVAQAENRAMPQLYSSTDVRPLNMNDFKTAHDQVCASVASDSSNMNELQQW 1198
Query: 624 NEMYGEGGTRTKSPFGF 640
NE+YGEGG+R K+ +
Sbjct: 1199 NELYGEGGSRKKTSLSY 1215
>ref|NP_176404.2| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 1025
Score = 375 bits (962), Expect = e-102
Identities = 228/580 (39%), Positives = 337/580 (57%), Gaps = 77/580 (13%)
Query: 75 YWINVKNIEHDLDAQSQDCYLAMEALREVLNSKQ---PLIVYFPDGSQWLHKSVPKSIRS 131
++ + +++ + A L + L EV + + P+I++ D ++ + S
Sbjct: 503 FFCSATDLQFESSASDDLNELLVTKLFEVAHDQSRTCPVIIFLKDAEKYFVGN------S 556
Query: 132 EFFHKVEEMFDQLSGPIVLICGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTDKG 191
F + + +S +++IC Q + + KEKG + RLTD
Sbjct: 557 HFCSAFKSKLEVISDNLIVICSQTHSDN-PKEKG------------------IGRLTD-- 595
Query: 192 QKTSDDDEINKLFSNVVSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQL 251
LF N V+I P+ E LL ++K L+ D + + ++N N LR VL +
Sbjct: 596 -----------LFVNKVTIYMPQGEELLKSWKYHLDRDAETLKMKANYNHLRMVLGRCGI 644
Query: 252 SCVDLLHLDSDDVILTKQKAEKVVGWAKNHYLSSCLLPCVKGD-KLCLPRESLEIAISRL 310
C + L D+ L + AEK++GWA +H++ S P D ++ L ESL+
Sbjct: 645 ECEGIETLCMKDLTLRRDSAEKIIGWALSHHIKSN--PGADPDVRVILSLESLKC----- 697
Query: 311 KGVETMSRQPSQSLKNLAKDE-FESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVIL 369
G+E + + +SLK++ + FE IS ++PP EIGV FDDIGALE+VK L ELV+L
Sbjct: 698 -GIELLEIESKKSLKDIVTENTFE---ISDIIPPSEIGVTFDDIGALENVKDTLKELVML 753
Query: 370 PMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGD 429
P + PELF G L +P GILLFGP GTGKT++AKA+ATEAGAN I++S S+WF +
Sbjct: 754 PFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVATEAGANLINMS----MSRWFSE 809
Query: 430 AEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKEN 489
EK KA+FS ASK++P IIF+DEV+S+L H + +NEF+ WDGLR+ E
Sbjct: 810 GEKYVKAVFSLASKISPSIIFLDEVESML--------HRYRLKTKNEFIINWDGLRTNEK 861
Query: 490 QRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLA 549
+R+L+L ATNRPFDLD+AVIRRLP R+ V LPDA +R KIL++IL E+L PDF D++A
Sbjct: 862 ERVLVLAATNRPFDLDEAVIRRLPHRLMVGLPDARSRSKILKVILSKEDLSPDFDIDEVA 921
Query: 550 NLTDGYSGSDLKNLCITAAYRPVQELLEEEKA------GDNNITNVA-----LRPLNLDD 598
++T+GYSG+DLKNLC+TAA R + E++E+EK+ + + LR L ++D
Sbjct: 922 SMTNGYSGNDLKNLCVTAARRRIIEIVEKEKSERDAAVAEGRVPPAGSGGSDLRVLKMED 981
Query: 599 FVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPF 638
F + V S++ +V++ LR+WNE YGEGG+R F
Sbjct: 982 FRNALELVSMSISSKSVNMTALRQWNEDYGEGGSRRNESF 1021
>dbj|BAD81550.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|56784122|dbj|BAD81507.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 840
Score = 364 bits (935), Expect = 4e-99
Identities = 225/601 (37%), Positives = 340/601 (56%), Gaps = 75/601 (12%)
Query: 95 LAMEALREVLNS---KQPLIVYFPDGSQWLHKSVPKSIRSEFFHKVEEMFDQLSGPIVLI 151
+ ++A+ +VL+S K P+++Y D ++LHKS + + E++ ++L GP++++
Sbjct: 248 ILVQAVYKVLHSVSKKNPIVLYIRDVEKFLHKS------KKMYVMFEKLLNKLEGPVLVL 301
Query: 152 CGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTDKGQKTSDDDEINKLFSNVVSIQ 211
+ +E + L + K P + L + +D ++ + N I
Sbjct: 302 GSRIVDMDFDEELDERLTALFPYNIEIKPPENENHLVSWNSQLEEDMKMIQFQDNRNHIT 361
Query: 212 PPKDENLLA-------------TFKKQLEE-------------------DRKIVISRSNL 239
EN L + +EE + K+++S +L
Sbjct: 362 EVLAENDLECDDLGSICLSDTMVLGRYIEEIVVSAVSYHLMNKKDPEYRNGKLLLSAKSL 421
Query: 240 NELRKVLEEHQLSCVDLLHLDSDDVILTKQKAEKVVGW------AKNHYLSSCLLPCVKG 293
+ ++ +E+++ D + L++ K+ A KV AK+ + LLP V
Sbjct: 422 SHALEIFQENKMYDKDSMKLEA------KRDASKVADRGIAPFAAKSETKPATLLPPVPP 475
Query: 294 DKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLAKD-EFESNFISAVVPPGEIGVKFDD 352
P + + + + S P+ + D EFE V+P EIGV FDD
Sbjct: 476 TAAAAPPVESKAEPEKFEKKDNPS--PAAKAPEMPPDNEFEKRIRPEVIPANEIGVTFDD 533
Query: 353 IGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEAGA 412
IGAL D+K++L ELV+LP+RRP+LF G LL+P +GILLFGPPGTGKT++AKA+A EA A
Sbjct: 534 IGALSDIKESLQELVMLPLRRPDLFK-GGLLKPCRGILLFGPPGTGKTMLAKAIANEAQA 592
Query: 413 NFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRR 472
+FI+VS ST+TSKWFG+ EK +ALF+ A+K++P IIFVDEVDS+LG R A EHEA R+
Sbjct: 593 SFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRNRAGEHEAMRK 652
Query: 473 MRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILRI 532
++NEFM WDGL S+ +Q+IL+L ATNRPFDLD+A+IRR RRI V LP ++R+ ILR
Sbjct: 653 IKNEFMTHWDGLLSRPDQKILVLAATNRPFDLDEAIIRRFERRIMVGLPSLESRELILRS 712
Query: 533 ILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEKAGD--------- 583
+L E +D + +LA +T+GYSGSDLKNLC TAAYRPV+EL+++E+ +
Sbjct: 713 LLSKEKVDGGLDYKELATMTEGYSGSDLKNLCTTAAYRPVRELIQKERKKELEKKREQGG 772
Query: 584 ---------NNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRT 634
+ LRPLN+ D ++K++V S A + + EL++WNE+YGEGG+R
Sbjct: 773 NASDASKMKEKDETIILRPLNMKDLKEAKNQVAASFAAEGTIMGELKQWNELYGEGGSRK 832
Query: 635 K 635
K
Sbjct: 833 K 833
>ref|XP_651910.1| AAA family ATPase, putative [Entamoeba histolytica HM-1:IMSS]
gi|56468701|gb|EAL46524.1| AAA family ATPase, putative
[Entamoeba histolytica HM-1:IMSS]
Length = 936
Score = 355 bits (912), Expect = 2e-96
Identities = 208/481 (43%), Positives = 297/481 (61%), Gaps = 25/481 (5%)
Query: 155 NKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTDKGQKTSDDDEINKLFSNVVSIQPPK 214
+K+QSG + M+ R +P S + T QK D + I+KLF NV+ PP
Sbjct: 468 SKSQSGPQMDQSLCMLGVKEFRFETIPFS--KATKDQQK--DLNNISKLFGNVLKFSPPT 523
Query: 215 DENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVI--LTKQKAE 272
E L +K + ED K+ N ++ + + LL +++ T ++ E
Sbjct: 524 GE-LERPWKALVNEDAKMEKIAKNRE---MIIAQTTALRIKLLQYPGEEMTETYTPEQIE 579
Query: 273 KVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLAKD-E 331
K +G A ++ G L +E + G+ T+ + + ++ + D E
Sbjct: 580 KAIGIAIEEARNTT------GIANELSKEQIA------HGLNTVREKKNIDIEEMETDNE 627
Query: 332 FESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILL 391
FE +S V+ +I V FDDIGAL+DVK+ LNE + LP++R ELF L + KG+LL
Sbjct: 628 FEKKLLSDVIRADDINVSFDDIGALDDVKEVLNETITLPLKRSELF-FSKLTQGAKGVLL 686
Query: 392 FGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFV 451
FGPPGTGKT++AKA+ATE+ +NFI+VS S+L SKWFG+AEK KALF+ ASKL+P +IFV
Sbjct: 687 FGPPGTGKTMLAKAVATESKSNFINVSMSSLGSKWFGEAEKYVKALFTLASKLSPCVIFV 746
Query: 452 DEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRR 511
DEVD+LLG R + EHEA R+M+NEFM+ WDGL+SKE +R++++ ATNRPFDLDDAV+RR
Sbjct: 747 DEVDALLGKRSSS-EHEAVRKMKNEFMSLWDGLKSKEMERVIVMAATNRPFDLDDAVLRR 805
Query: 512 LPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRP 571
L RRI VDLP+ NR IL+ IL+ E+++ D + +A T+G+SGSDL L A RP
Sbjct: 806 LSRRILVDLPNETNRVLILKKILRREDVEKDLNYSIIAQQTEGFSGSDLFALGQMVAMRP 865
Query: 572 VQELLEEEKAGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGG 631
++E L +E G N LRPL+ DF++ K+ PSV+ D+ S+NELR+WN +YGEG
Sbjct: 866 IKEYLAKEVKGQKKEMNPVLRPLSTQDFLEEVKKINPSVSKDSSSLNELRRWNSLYGEGA 925
Query: 632 T 632
+
Sbjct: 926 S 926
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.136 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,113,044,635
Number of Sequences: 2540612
Number of extensions: 48104285
Number of successful extensions: 153377
Number of sequences better than 10.0: 4726
Number of HSP's better than 10.0 without gapping: 2942
Number of HSP's successfully gapped in prelim test: 1785
Number of HSP's that attempted gapping in prelim test: 143141
Number of HSP's gapped (non-prelim): 6608
length of query: 645
length of database: 863,360,394
effective HSP length: 135
effective length of query: 510
effective length of database: 520,377,774
effective search space: 265392664740
effective search space used: 265392664740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0135.9